BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P29468
         (568 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

2O1P-A nrPDB                                                         1118   0.0  
4LT6-A nrPDB                                                          396   e-110
1Q78-A nrPDB                                                          392   e-109
3NYB-A nrPDB                                                           33   0.26 
5CA8-A nrPDB                                                           28   8.7  
5LQX-G nrPDB                                                           28   10.0 

>2O1P-A nrPDB
          Length = 546

 Score = 1118 bits (2892), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/543 (99%), Positives = 539/543 (99%)

Query: 1   MSSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQ 60
           MSSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQ
Sbjct: 1   MSSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQ 60

Query: 61  RFVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVF 120
           RFVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVF
Sbjct: 61  RFVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVF 120

Query: 121 DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180
           DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL
Sbjct: 121 DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180

Query: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
           DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240

Query: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
           ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300

Query: 301 PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKF 360
           PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKF
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKF 360

Query: 361 YLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDD 420
           YLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDD
Sbjct: 361 YLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDD 420

Query: 421 YEMIQDKYGSHKTETALNALKLVTDENKEEESIKDAPKAYLSTMYIGLDFNIENKKEKVD 480
           YEMIQDKYGSHKTETALNALKLVTDENKEEESIKDAPKAYLSTMYIGLDFNIENKKEKVD
Sbjct: 421 YEMIQDKYGSHKTETALNALKLVTDENKEEESIKDAPKAYLSTMYIGLDFNIENKKEKVD 480

Query: 481 IHIPCTEFVNLCRSFNEDYGDHKVFNLALRFVKGYDLPDEVFDENEKRPSKKSKRKNLDA 540
           IHIPCTEFVNLCRSFNEDYGDHKVFNLALRFVKGYDLPDEVFDENEKRPSKKSKRKNL  
Sbjct: 481 IHIPCTEFVNLCRSFNEDYGDHKVFNLALRFVKGYDLPDEVFDENEKRPSKKSKRKNLLE 540

Query: 541 RHE 543
            H 
Sbjct: 541 HHH 543


>4LT6-A nrPDB
          Length = 514

 Score =  396 bits (1018), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 187/400 (46%), Positives = 268/400 (67%), Gaps = 1/400 (0%)

Query: 4   QKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFV 63
           QK +GIT P+S       ++     LI  +K  G FE E+E  +R+ VL  L  L + ++
Sbjct: 22  QKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWI 81

Query: 64  YEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSL 123
            +VS+ KN+   +    GGKIFT+GSYRLGVH  G+DID L V P+HV R DFF  F   
Sbjct: 82  SDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEK 141

Query: 124 LRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEK 183
           L+ +  +  +  V DAFVP+IK +F GI IDL+ ARL    +  +L L D + LR+LD +
Sbjct: 142 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 201

Query: 184 DLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARI 243
            +R+LNG RVTDEIL LVP    FR+ LRA+KLWA+RR +Y+N+ GF GGV+WAMLVAR 
Sbjct: 202 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 261

Query: 244 CQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303
           CQLYPNA ++ ++++FF++ S+W WP PV+LK  E+  L + VW+P++   DR H MP+I
Sbjct: 262 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 321

Query: 304 TPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLE 363
           TPAYP   +T+N++ ST+ V+++EF +G+ +T++I   K  W+ L E  +FF +Y+ Y+ 
Sbjct: 322 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIV 381

Query: 364 ITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAH 403
           +TA +  ++E HL+W GLVESK+R+LV  LE    I +AH
Sbjct: 382 LTA-SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAH 420


>1Q78-A nrPDB
          Length = 514

 Score =  392 bits (1006), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 193/421 (45%), Positives = 284/421 (67%), Gaps = 1/421 (0%)

Query: 4   QKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFV 63
           QK +GIT P+S       +  L   L++ LK  G FE E+E   R+ +L  L  L + ++
Sbjct: 17  QKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWI 76

Query: 64  YEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSL 123
            E+S+ KN+   +  + GGKIFT+GSYRLGVH  G+DID L V P+HV R DFFT F   
Sbjct: 77  REISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDK 136

Query: 124 LRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEK 183
           L+ ++E+ ++  V +AFVP+IK+ F GI ID++ ARL    +P  L L D +LL+NLD +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196

Query: 184 DLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARI 243
            +R+LNG RVTDEIL LVP  + FR+ LRAIKLWA+R  +Y+NI GF GGV+WAMLVAR 
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256

Query: 244 CQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303
           CQLYPNA ++ ++++FF++ S+W WP PV+LK  E+  L + VW+P++   DR H MP+I
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316

Query: 304 TPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLE 363
           TPAYP   +T+N++ ST+ V+++EF +G+ IT++I  +K  W+ LFE  +FF +YK Y+ 
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIV 376

Query: 364 ITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDDYEM 423
           + A +  +++Q L+W GLVESK+R+LV  LE    I +AH   + F +    P ++++  
Sbjct: 377 LLA-SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRT 435

Query: 424 I 424
           +
Sbjct: 436 M 436


>3NYB-A nrPDB
          Length = 323

 Score = 33.5 bits (75), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 84  IFTYGSYRLGVHGPGSDIDTLVV--VPKHVTREDFFTVFDSLLRERKELDEIAPVPDAFV 141
           +  +GSY   ++ PGSDID +V   +    +R + +++  S L+++    E+  V  A V
Sbjct: 62  LHVFGSYSTDLYLPGSDIDCVVTSELGGKESRNNLYSL-ASHLKKKNLATEVEVVAKARV 120

Query: 142 PIIKI--KFSGISI 153
           PIIK     SGI I
Sbjct: 121 PIIKFVEPHSGIHI 134


>5CA8-A nrPDB
          Length = 692

 Score = 28.5 bits (62), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 13/102 (12%)

Query: 457 PKAYLSTMYIGLDFNIENKKEKVDIHIPCTEFVNLCRSFNEDYGDHKVFNLALR--FVKG 514
           PK YL+   +   F +  K+  + + +P   F  L    +E   D+ +F+  LR  F+ G
Sbjct: 587 PKLYLNEQDLEKTFAVA-KQHALQV-LPILTFAKLADG-SEIVPDYDIFDSKLREQFLGG 643

Query: 515 YDLPD--------EVFDENEKRPSKKSKRKNLDARHETVKRS 548
           YD  D        E+  E EK       +K +DA++   KRS
Sbjct: 644 YDDSDDEEDHCFAEIITEQEKLEVLAKFKKEVDAKYIETKRS 685


>5LQX-G nrPDB
          Length = 269

 Score = 28.1 bits (61), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 6/64 (9%)

Query: 30  IQELKKEGSFETEQETANRVQVLKI------LQELAQRFVYEVSKKKNMSDGMARDAGGK 83
           I+E  K   FE E++ A    + +I      L  +A+ +  E+S ++N  D  +++AG  
Sbjct: 179 IEESPKLSEFELEEDQAIPTSLSQISLTNAILNAMAEGYASEISARRNAMDNASKNAGEM 238

Query: 84  IFTY 87
           I  Y
Sbjct: 239 INKY 242


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

2O1P-A nrPDB                                                         1013   0.0  
4LT6-A nrPDB                                                          721   0.0  
1Q78-A nrPDB                                                          717   0.0  

Sequences not found previously or not previously below threshold:

3NYB-A nrPDB                                                           40   0.003
5W0B-A nrPDB                                                           33   0.28 
4HU0-A nrPDB                                                           31   1.4  
6GCS-G nrPDB                                                           30   2.0  
2XOK-G nrPDB                                                           30   2.7  
3OEE-G nrPDB                                                           30   3.2  
2M72-A nrPDB                                                           30   4.2  
1UYP-A nrPDB                                                           30   4.3  
1L1N-A nrPDB                                                           29   6.1  


CONVERGED!
>2O1P-A nrPDB
          Length = 546

 Score = 1013 bits (2619), Expect = 0.0,   Method: Composition-based stats.
 Identities = 539/543 (99%), Positives = 539/543 (99%)

Query: 1   MSSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQ 60
           MSSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQ
Sbjct: 1   MSSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQ 60

Query: 61  RFVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVF 120
           RFVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVF
Sbjct: 61  RFVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVF 120

Query: 121 DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180
           DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL
Sbjct: 121 DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL 180

Query: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240
           DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV
Sbjct: 181 DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV 240

Query: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
           ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM
Sbjct: 241 ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300

Query: 301 PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKF 360
           PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKF
Sbjct: 301 PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKF 360

Query: 361 YLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDD 420
           YLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDD
Sbjct: 361 YLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDD 420

Query: 421 YEMIQDKYGSHKTETALNALKLVTDENKEEESIKDAPKAYLSTMYIGLDFNIENKKEKVD 480
           YEMIQDKYGSHKTETALNALKLVTDENKEEESIKDAPKAYLSTMYIGLDFNIENKKEKVD
Sbjct: 421 YEMIQDKYGSHKTETALNALKLVTDENKEEESIKDAPKAYLSTMYIGLDFNIENKKEKVD 480

Query: 481 IHIPCTEFVNLCRSFNEDYGDHKVFNLALRFVKGYDLPDEVFDENEKRPSKKSKRKNLDA 540
           IHIPCTEFVNLCRSFNEDYGDHKVFNLALRFVKGYDLPDEVFDENEKRPSKKSKRKNL  
Sbjct: 481 IHIPCTEFVNLCRSFNEDYGDHKVFNLALRFVKGYDLPDEVFDENEKRPSKKSKRKNLLE 540

Query: 541 RHE 543
            H 
Sbjct: 541 HHH 543


>4LT6-A nrPDB
          Length = 514

 Score =  721 bits (1860), Expect = 0.0,   Method: Composition-based stats.
 Identities = 189/421 (44%), Positives = 276/421 (65%), Gaps = 1/421 (0%)

Query: 4   QKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFV 63
           QK +GIT P+S       ++     LI  +K  G FE E+E  +R+ VL  L  L + ++
Sbjct: 22  QKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNHRLVVLGKLNNLVKEWI 81

Query: 64  YEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSL 123
            +VS+ KN+   +    GGKIFT+GSYRLGVH  G+DID L V P+HV R DFF  F   
Sbjct: 82  SDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVERSDFFQSFFEK 141

Query: 124 LRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEK 183
           L+ +  +  +  V DAFVP+IK +F GI IDL+ ARL    +  +L L D + LR+LD +
Sbjct: 142 LKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIR 201

Query: 184 DLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARI 243
            +R+LNG RVTDEIL LVP    FR+ LRA+KLWA+RR +Y+N+ GF GGV+WAMLVAR 
Sbjct: 202 CIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVART 261

Query: 244 CQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303
           CQLYPNA ++ ++++FF++ S+W WP PV+LK  E+  L + VW+P++   DR H MP+I
Sbjct: 262 CQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPII 321

Query: 304 TPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLE 363
           TPAYP   +T+N++ ST+ V+++EF +G+ +T++I   K  W+ L E  +FF +Y+ Y+ 
Sbjct: 322 TPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSKLLEPPNFFQKYRHYIV 381

Query: 364 ITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDDYEM 423
           +TA +  ++E HL+W GLVESK+R+LV  LE    I +AH   + F  +     +++Y  
Sbjct: 382 LTA-SASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVS 440

Query: 424 I 424
           +
Sbjct: 441 M 441


>1Q78-A nrPDB
          Length = 514

 Score =  717 bits (1851), Expect = 0.0,   Method: Composition-based stats.
 Identities = 193/421 (45%), Positives = 284/421 (67%), Gaps = 1/421 (0%)

Query: 4   QKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFV 63
           QK +GIT P+S       +  L   L++ LK  G FE E+E   R+ +L  L  L + ++
Sbjct: 17  QKHYGITSPISLAAPKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWI 76

Query: 64  YEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSL 123
            E+S+ KN+   +  + GGKIFT+GSYRLGVH  G+DID L V P+HV R DFFT F   
Sbjct: 77  REISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDK 136

Query: 124 LRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEK 183
           L+ ++E+ ++  V +AFVP+IK+ F GI ID++ ARL    +P  L L D +LL+NLD +
Sbjct: 137 LKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 196

Query: 184 DLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARI 243
            +R+LNG RVTDEIL LVP  + FR+ LRAIKLWA+R  +Y+NI GF GGV+WAMLVAR 
Sbjct: 197 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 256

Query: 244 CQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303
           CQLYPNA ++ ++++FF++ S+W WP PV+LK  E+  L + VW+P++   DR H MP+I
Sbjct: 257 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 316

Query: 304 TPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLE 363
           TPAYP   +T+N++ ST+ V+++EF +G+ IT++I  +K  W+ LFE  +FF +YK Y+ 
Sbjct: 317 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIV 376

Query: 364 ITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDDYEM 423
           + A +  +++Q L+W GLVESK+R+LV  LE    I +AH   + F +    P ++++  
Sbjct: 377 LLA-SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRT 435

Query: 424 I 424
           +
Sbjct: 436 M 436


>3NYB-A nrPDB
          Length = 323

 Score = 40.0 bits (92), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 21/119 (17%)

Query: 59  AQRFVYEVSKKK------NMSDGMARDAGGKIF------TYGSYRLGVHGPGSDIDTLVV 106
            + FV  +S  +      N +    R+A  +++       +GSY   ++ PGSDID   V
Sbjct: 25  IKDFVAYISPSREEIEIRNQTISTIREAVKQLWPDADLHVFGSYSTDLYLPGSDID--CV 82

Query: 107 VPKHV----TREDFFTVFDSLLRERKELDEIAPVPDAFVPIIKI--KFSGISIDLICAR 159
           V   +    +R + +    S L+++    E+  V  A VPIIK     SGI I +   R
Sbjct: 83  VTSELGGKESRNNLY-SLASHLKKKNLATEVEVVAKARVPIIKFVEPHSGIHIAVSFER 140


>5W0B-A nrPDB
          Length = 389

 Score = 33.5 bits (75), Expect = 0.28,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 9/83 (10%)

Query: 81  GGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTRE---DFFTVFDSL---LRERKELDEIA 134
           G K+  +GS + G     SD+  + +    +      D     + L   LR+   L  I 
Sbjct: 63  GTKLSLFGSSKNGFGFKQSDL-AVCMTINGLETAEGLDCVRTIEELARVLRKHSGLRNIL 121

Query: 135 PVPDAFVPIIKIKF--SGISIDL 155
           P+  A VPI+K     SG+ +D+
Sbjct: 122 PITTAKVPIVKFFHLRSGLEVDI 144


>4HU0-A nrPDB
          Length = 359

 Score = 31.1 bits (69), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 401 IAHPFTKPFESSYCCPTEDDYEMIQDKYGSHKTE 434
           ++HP+ +   + Y    E D+  + DKY    TE
Sbjct: 252 VSHPYPQKVGAPYQANWERDFGFMADKYPVFATE 285


>6GCS-G nrPDB
          Length = 281

 Score = 30.4 bits (67), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 42/97 (43%), Gaps = 9/97 (9%)

Query: 288 NPKIYAQDRSHRMPVITPAYPSMCATHNITESTKKVI--LQEFVRGVQITNDIFSNKKSW 345
           +PK++  +     P++ PA   +    ++ +  K ++  L ++++G  +  D  +   + 
Sbjct: 45  DPKVHVDEVYE--PIVNPADRYLQHVSDLHQYAKYIMAALPKYIQGFSVWKDELTLHVAP 102

Query: 346 ANLFEKNDFFF-----RYKFYLEITAYTRGSDEQHLK 377
           + +     F       +YK  ++ITA    S E   +
Sbjct: 103 SAVIPVTTFLRDNTSTQYKSIIDITAVDYPSRENRFE 139


>2XOK-G nrPDB
          Length = 311

 Score = 30.0 bits (66), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 7/83 (8%)

Query: 12  PVSTVGATAAEN-KLNDSLIQELKKEGSFETEQETA------NRVQVLKILQELAQRFVY 64
           PVS++    +E    N   I++    G FE + +              ++L  +AQ +  
Sbjct: 202 PVSSLSFEPSEKPIFNAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGYAA 261

Query: 65  EVSKKKNMSDGMARDAGGKIFTY 87
           E+S ++N  D  +++AG  I  Y
Sbjct: 262 EISARRNAMDNASKNAGDMINRY 284


>3OEE-G nrPDB
          Length = 278

 Score = 30.0 bits (66), Expect = 3.2,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 7/83 (8%)

Query: 12  PVSTVGATAAEN-KLNDSLIQELKKEGSFETEQETA------NRVQVLKILQELAQRFVY 64
           PVS++    +E    N   I++    G FE + +              ++L  +AQ +  
Sbjct: 169 PVSSLSFEPSEKPIFNAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGYAA 228

Query: 65  EVSKKKNMSDGMARDAGGKIFTY 87
           E+S ++N  D  +++AG  I  Y
Sbjct: 229 EISARRNAMDNASKNAGDMINRY 251


>2M72-A nrPDB
          Length = 156

 Score = 29.6 bits (65), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 26/63 (41%)

Query: 392 KLEVLAGIKIAHPFTKPFESSYCCPTEDDYEMIQDKYGSHKTETALNALKLVTDENKEEE 451
            ++         P    F ++ C P   + + IQ+ Y   + ET +  + +  DE +  +
Sbjct: 21  TVQTNKLENAGKPMIISFFATNCKPCLRELKAIQEVYADWQDETGVRLIAVSIDEGQNAQ 80

Query: 452 SIK 454
            +K
Sbjct: 81  KVK 83


>1UYP-A nrPDB
          Length = 432

 Score = 29.6 bits (65), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 270 QPVILKPIEDGPLQVRVWNPKIYAQDRSHRM 300
            PVI KP E+G    R  +PK+   +   RM
Sbjct: 122 NPVISKPPEEGTHAFR--DPKVNRSNGEWRM 150


>1L1N-A nrPDB
          Length = 183

 Score = 28.8 bits (63), Expect = 6.1,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 32/65 (49%)

Query: 131 DEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNG 190
           D +A +P    P   I   G  ++++ A+  + Q   +L ++   L RN   +D+R    
Sbjct: 32  DNVAILPTHASPGESIVIDGKEVEILDAKALEDQAGTNLEITIITLKRNEKFRDIRPHIP 91

Query: 191 TRVTD 195
           T++T+
Sbjct: 92  TQITE 96


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.313    0.138    0.402 

Lambda     K      H
   0.267   0.0422    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,502,584
Number of Sequences: 36641
Number of extensions: 1025137
Number of successful extensions: 2460
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 2442
Number of HSP's gapped (non-prelim): 34
length of query: 568
length of database: 10,336,785
effective HSP length: 102
effective length of query: 466
effective length of database: 6,599,403
effective search space: 3075321798
effective search space used: 3075321798
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 62 (28.4 bits)