BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P29056 (596 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6F41-V nrPDB 1234 0.0 6CNF-R nrPDB 798 0.0 1AIS-B nrPDB 81 1e-15 5IYC-M nrPDB 72 6e-13 5WH1-A nrPDB 65 9e-11 4ROE-A nrPDB 43 5e-04 6GYK-M nrPDB 41 0.001 5O9B-A nrPDB 30 2.4 4HC9-A nrPDB 30 3.0 2QVH-A nrPDB 30 3.9 4CE4-i nrPDB 30 4.4 3DFX-A nrPDB 29 5.8 3U8P-A nrPDB 28 7.9 >6F41-V nrPDB Length = 596 Score = 1234 bits (3193), Expect = 0.0, Method: Compositional matrix adjust. Identities = 596/596 (100%), Positives = 596/596 (100%) Query: 1 MPVCKNCHGTEFERDLSNANNDLVCKACGVVSEDNPIVSEVTFGETSAGAAVVQGSFIGA 60 MPVCKNCHGTEFERDLSNANNDLVCKACGVVSEDNPIVSEVTFGETSAGAAVVQGSFIGA Sbjct: 1 MPVCKNCHGTEFERDLSNANNDLVCKACGVVSEDNPIVSEVTFGETSAGAAVVQGSFIGA 60 Query: 61 GQSHAAFGGSSALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGR 120 GQSHAAFGGSSALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGR Sbjct: 61 GQSHAAFGGSSALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGR 120 Query: 121 RSQNVIASCLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVKKLHITELPLADPSL 180 RSQNVIASCLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVKKLHITELPLADPSL Sbjct: 121 RSQNVIASCLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVKKLHITELPLADPSL 180 Query: 181 FIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRT 240 FIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRT Sbjct: 181 FIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRT 240 Query: 241 HTEIVAVSHVAEETLQQRLNEFKNTKAAKLSVQKFRENDVEDGEARPPSFVKNRKKERKI 300 HTEIVAVSHVAEETLQQRLNEFKNTKAAKLSVQKFRENDVEDGEARPPSFVKNRKKERKI Sbjct: 241 HTEIVAVSHVAEETLQQRLNEFKNTKAAKLSVQKFRENDVEDGEARPPSFVKNRKKERKI 300 Query: 301 KDSLDKEEMFQTSEEALNKNPILTQVLGEQELSSKEVLFYLKQFSERRARVVERIKATNG 360 KDSLDKEEMFQTSEEALNKNPILTQVLGEQELSSKEVLFYLKQFSERRARVVERIKATNG Sbjct: 301 KDSLDKEEMFQTSEEALNKNPILTQVLGEQELSSKEVLFYLKQFSERRARVVERIKATNG 360 Query: 361 IDGENIYHEGSENETRKRKLSEVSIQNEHVEGEDKETEGTEEKVKKVKTKTSEEKKENES 420 IDGENIYHEGSENETRKRKLSEVSIQNEHVEGEDKETEGTEEKVKKVKTKTSEEKKENES Sbjct: 361 IDGENIYHEGSENETRKRKLSEVSIQNEHVEGEDKETEGTEEKVKKVKTKTSEEKKENES 420 Query: 421 GHFQDAIDGYSLETDPYCPRNLHLLPTTDTYLSKVSDDPDNLEDVDDEELNAHLLNEEAS 480 GHFQDAIDGYSLETDPYCPRNLHLLPTTDTYLSKVSDDPDNLEDVDDEELNAHLLNEEAS Sbjct: 421 GHFQDAIDGYSLETDPYCPRNLHLLPTTDTYLSKVSDDPDNLEDVDDEELNAHLLNEEAS 480 Query: 481 KLKERIWIGLNADFLLEQESKRLKQEADIATGNTSVKKKRTRRRNNTRSDEPTKTVDAAA 540 KLKERIWIGLNADFLLEQESKRLKQEADIATGNTSVKKKRTRRRNNTRSDEPTKTVDAAA Sbjct: 481 KLKERIWIGLNADFLLEQESKRLKQEADIATGNTSVKKKRTRRRNNTRSDEPTKTVDAAA 540 Query: 541 AIGLMSDLQDKSGLHAALKAAEESGDFTTADSVKNMLQKASFSKKINYDAIDGLFR 596 AIGLMSDLQDKSGLHAALKAAEESGDFTTADSVKNMLQKASFSKKINYDAIDGLFR Sbjct: 541 AIGLMSDLQDKSGLHAALKAAEESGDFTTADSVKNMLQKASFSKKINYDAIDGLFR 596 >6CNF-R nrPDB Length = 736 Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust. Identities = 382/382 (100%), Positives = 382/382 (100%) Query: 1 MPVCKNCHGTEFERDLSNANNDLVCKACGVVSEDNPIVSEVTFGETSAGAAVVQGSFIGA 60 MPVCKNCHGTEFERDLSNANNDLVCKACGVVSEDNPIVSEVTFGETSAGAAVVQGSFIGA Sbjct: 1 MPVCKNCHGTEFERDLSNANNDLVCKACGVVSEDNPIVSEVTFGETSAGAAVVQGSFIGA 60 Query: 61 GQSHAAFGGSSALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGR 120 GQSHAAFGGSSALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGR Sbjct: 61 GQSHAAFGGSSALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGR 120 Query: 121 RSQNVIASCLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVKKLHITELPLADPSL 180 RSQNVIASCLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVKKLHITELPLADPSL Sbjct: 121 RSQNVIASCLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVKKLHITELPLADPSL 180 Query: 181 FIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRT 240 FIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRT Sbjct: 181 FIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRT 240 Query: 241 HTEIVAVSHVAEETLQQRLNEFKNTKAAKLSVQKFRENDVEDGEARPPSFVKNRKKERKI 300 HTEIVAVSHVAEETLQQRLNEFKNTKAAKLSVQKFRENDVEDGEARPPSFVKNRKKERKI Sbjct: 241 HTEIVAVSHVAEETLQQRLNEFKNTKAAKLSVQKFRENDVEDGEARPPSFVKNRKKERKI 300 Query: 301 KDSLDKEEMFQTSEEALNKNPILTQVLGEQELSSKEVLFYLKQFSERRARVVERIKATNG 360 KDSLDKEEMFQTSEEALNKNPILTQVLGEQELSSKEVLFYLKQFSERRARVVERIKATNG Sbjct: 301 KDSLDKEEMFQTSEEALNKNPILTQVLGEQELSSKEVLFYLKQFSERRARVVERIKATNG 360 Query: 361 IDGENIYHEGSENETRKRKLSE 382 IDGENIYHEGSENETRKRKLSE Sbjct: 361 IDGENIYHEGSENETRKRKLSE 382 Score = 296 bits (757), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 158/158 (100%), Positives = 158/158 (100%) Query: 439 PRNLHLLPTTDTYLSKVSDDPDNLEDVDDEELNAHLLNEEASKLKERIWIGLNADFLLEQ 498 PRNLHLLPTTDTYLSKVSDDPDNLEDVDDEELNAHLLNEEASKLKERIWIGLNADFLLEQ Sbjct: 579 PRNLHLLPTTDTYLSKVSDDPDNLEDVDDEELNAHLLNEEASKLKERIWIGLNADFLLEQ 638 Query: 499 ESKRLKQEADIATGNTSVKKKRTRRRNNTRSDEPTKTVDAAAAIGLMSDLQDKSGLHAAL 558 ESKRLKQEADIATGNTSVKKKRTRRRNNTRSDEPTKTVDAAAAIGLMSDLQDKSGLHAAL Sbjct: 639 ESKRLKQEADIATGNTSVKKKRTRRRNNTRSDEPTKTVDAAAAIGLMSDLQDKSGLHAAL 698 Query: 559 KAAEESGDFTTADSVKNMLQKASFSKKINYDAIDGLFR 596 KAAEESGDFTTADSVKNMLQKASFSKKINYDAIDGLFR Sbjct: 699 KAAEESGDFTTADSVKNMLQKASFSKKINYDAIDGLFR 736 >1AIS-B nrPDB Length = 200 Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 93/174 (53%), Gaps = 4/174 (2%) Query: 90 VSYALHIPEYITDAAFQWYKLALANNFVQGRRSQNVIASCLYVACRKEKTHHMLIDFSSR 149 ++ L +P ++ + A + Y+ A+ ++GR ++V+A+C+Y ACR K L + + Sbjct: 19 ITAQLKLPRHVEEEAARLYREAVRKGLIRGRSIESVMAACVYAACRLLKVPRTLDEIADI 78 Query: 150 LQVSVYSIGATFLKMVKKLHITELPL-ADPSLFIQHFAEKLDLADKKIKVVKDAVKLAQR 208 +V IG ++ + + L++T L P+ ++ FA++L L++ KV + A+++ Sbjct: 79 ARVDKKEIGRSYRFIARNLNLTPKKLFVKPTDYVNKFADELGLSE---KVRRRAIEILDE 135 Query: 209 MSKDWMFEGRRPAGIAGACILLACRMNNLRRTHTEIVAVSHVAEETLQQRLNEF 262 K + G+ PAG+ A + +A + +RT E+ V+ V E T++ R E Sbjct: 136 AYKRGLTSGKSPAGLVAAALYIASLLEGEKRTQREVAEVARVTEVTVRNRYKEL 189 >5IYC-M nrPDB Length = 316 Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 64/273 (23%), Positives = 121/273 (44%), Gaps = 51/273 (18%) Query: 21 NDLVCKACGVVSED----------------------------NPIVSEVTFGETSAGAAV 52 D++C CG+V D NP++S+ G+ S Sbjct: 30 GDMICPECGLVVGDRVIDVGSEWRTFSNDKATKDPSRVGDSQNPLLSD---GDLS----- 81 Query: 53 VQGSFIGAGQSHAAFG--GSSALESREA------TLNNARRKLRAVSYALHIPEYITDAA 104 + IG G A+F G+S ++R + NA +++ ++ +++P I D Sbjct: 82 ---TMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKEITTMADRINLPRNIVDRT 138 Query: 105 FQWYKLALANNFVQGRRSQNVIASCLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKM 164 +K ++GR + + ++CLY+ACR+E + + ++S IG F + Sbjct: 139 NNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLI 198 Query: 165 VKKLHITELPLADPSLFIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIA 224 +K L T + L F+ F L L K++++ A +A++ + + GR P +A Sbjct: 199 LKALE-TSVDLITTGDFMSRFCSNLCLP-KQVQMA--ATHIARKAVELDLVPGRSPISVA 254 Query: 225 GACILLACRMNNLRRTHTEIVAVSHVAEETLQQ 257 A I +A + + +RT EI ++ VA+ T++Q Sbjct: 255 AAAIYMASQASAEKRTQKEIGDIAGVADVTIRQ 287 >5WH1-A nrPDB Length = 211 Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 94/186 (50%), Gaps = 4/186 (2%) Query: 72 ALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGRRSQNVIASCLY 131 ++ S + + NA +++ ++ +++P I D +K ++GR + + ++CLY Sbjct: 1 SMSSSDRAMMNAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLY 60 Query: 132 VACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVKKLHITELPLADPSLFIQHFAEKLDL 191 +ACR+E + + ++S IG F ++K L T + L F+ F L L Sbjct: 61 IACRQEGVPRTFKEICAVSRISKKEIGRCFKLILKALE-TSVDLITTGDFMSRFCSNLCL 119 Query: 192 ADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRTHTEIVAVSHVA 251 K++++ A +A++ + + GR P +A A I +A + + +RT EI ++ VA Sbjct: 120 P-KQVQMA--ATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVA 176 Query: 252 EETLQQ 257 + T++Q Sbjct: 177 DVTIRQ 182 >4ROE-A nrPDB Length = 360 Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 32/163 (19%), Positives = 70/163 (42%), Gaps = 19/163 (11%) Query: 85 RKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGRRSQN---VIASCLYVACRKEKTHH 141 R++R + L +P D A +Y+ A ++ ++ R Q ++ C+ + CR+ Sbjct: 15 RRVRDLCRVLQLPPTFEDTAVAYYQQAYRHSGIRAARLQKKEVLVGCCVLITCRQHNWPL 74 Query: 142 MLIDFSSRLQVSVYSIGATFLKMVK--KLHITELPLADPSLFIQHFAEKLDL-------- 191 + + L + +T++++VK L + L LA+ ++ + L Sbjct: 75 TMGAICTLLYADLDVFSSTYMQIVKLLGLDVPSLCLAE---LVKTYCSSFKLFQASPSVP 131 Query: 192 ---ADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLA 231 + K K++ ++L + ++ W+ GR P + A LA Sbjct: 132 AKYVEDKEKMLSRTMQLVELANETWLVTGRHPLPVITAATFLA 174 >6GYK-M nrPDB Length = 345 Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/200 (19%), Positives = 82/200 (41%), Gaps = 16/200 (8%) Query: 69 GSSALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGRRSQNVIAS 128 G + ++ ++ + A K+ + A +P+ + D A + YKL ++G+ ++++A+ Sbjct: 115 GKNVMDKKDNEVQAAFAKITMLCDAAELPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAA 174 Query: 129 CLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVK------------KLHITELPLA 176 + + CR+ + + S + V G T L ++K K+ + A Sbjct: 175 SILIGCRRAEVARTFKEIQSLIHVKTKEFGKT-LNIMKNILRGKSEDGFLKIDTDNMSGA 233 Query: 177 DPSLFIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNN 236 +I F L L ++V A A++ + G+ P IA I L + Sbjct: 234 QNLTYIPRFCSHLGLP---MQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQ 290 Query: 237 LRRTHTEIVAVSHVAEETLQ 256 + T ++ V E T++ Sbjct: 291 IPITAAKVGQTLQVTEGTIK 310 Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Query: 197 KVVKDAVKLAQRMSKD-WMFEGRRPAGIAGACILLACRMNNLRRTHTEIVAVSHVAEETL 255 K+VKD K A ++ D +G+ I A IL+ CR + RT EI ++ HV + Sbjct: 144 KIVKDCAKEAYKLCHDEKTLKGKSMESIMAASILIGCRRAEVARTFKEIQSLIHVKTKEF 203 Query: 256 QQRLNEFKN 264 + LN KN Sbjct: 204 GKTLNIMKN 212 >5O9B-A nrPDB Length = 68 Score = 30.4 bits (67), Expect = 2.4, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 14/27 (51%) Query: 4 CKNCHGTEFERDLSNANNDLVCKACGV 30 C NC T NAN D VC ACG+ Sbjct: 26 CANCQTTTTTLWRRNANGDPVCNACGL 52 >4HC9-A nrPDB Length = 115 Score = 30.0 bits (66), Expect = 3.0, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 14/27 (51%) Query: 4 CKNCHGTEFERDLSNANNDLVCKACGV 30 C NC T NAN D VC ACG+ Sbjct: 62 CANCQTTTTTLWRRNANGDPVCNACGL 88 >2QVH-A nrPDB Length = 327 Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust. Identities = 15/38 (39%), Positives = 24/38 (63%) Query: 528 RSDEPTKTVDAAAAIGLMSDLQDKSGLHAALKAAEESG 565 R+++P + DA AA ++ +Q G+ AAL+ AEE G Sbjct: 184 RAEDPLRVRDAEAADVVVLKVQPLGGVRAALRLAEECG 221 >4CE4-i nrPDB Length = 312 Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust. Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 17/73 (23%) Query: 247 VSHVAEETLQQRLNEFKNTKAAKLSVQKFRENDVEDGEARPPSFVKNRKKERKIKDSLDK 306 +S +++E L QR K A++LS++K RE+D P+F KIKD +K Sbjct: 97 ISSLSKEGLAQRAERLKKNVASQLSIRKIRESD--------PNF--------KIKDFPEK 140 Query: 307 -EEMFQTSEEALN 318 +++F + LN Sbjct: 141 AKDIFIEAHLCLN 153 >3DFX-A nrPDB Length = 63 Score = 28.9 bits (63), Expect = 5.8, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 14/27 (51%) Query: 4 CKNCHGTEFERDLSNANNDLVCKACGV 30 C NC T NAN D VC ACG+ Sbjct: 10 CANCQTTTTTLWRRNANGDPVCNACGL 36 >3U8P-A nrPDB Length = 349 Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust. Identities = 15/46 (32%), Positives = 23/46 (50%) Query: 56 SFIGAGQSHAAFGGSSALESREATLNNARRKLRAVSYALHIPEYIT 101 S G G+ A FGGS+ LE TLN+ + + A + + +T Sbjct: 29 SVSGEGEGDATFGGSADLEDNMETLNDNLKVIEKADNAAQVKDALT 74 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6F41-V nrPDB 1048 0.0 6CNF-R nrPDB 646 0.0 5IYC-M nrPDB 287 8e-78 5WH1-A nrPDB 250 1e-66 6GYK-M nrPDB 229 3e-60 1AIS-B nrPDB 215 4e-56 4ROE-A nrPDB 174 9e-44 Sequences not found previously or not previously below threshold: 1ZP2-A nrPDB 39 0.005 5Z57-V nrPDB 39 0.006 4ELJ-A nrPDB 35 0.11 2QDJ-A nrPDB 35 0.11 1RLY-A nrPDB 34 0.22 2W99-A nrPDB 33 0.35 5O9B-A nrPDB 33 0.45 4HC9-A nrPDB 33 0.45 3DFX-A nrPDB 33 0.45 6EM5-I nrPDB 33 0.49 2I1J-A nrPDB 32 0.50 4BXZ-X nrPDB 32 0.73 2QVH-A nrPDB 32 0.87 3FAY-A nrPDB 31 2.2 2VPX-A nrPDB 30 2.4 6O00-A nrPDB 30 3.6 1KXU-A nrPDB 30 3.6 2Y4T-A nrPDB 30 4.1 CONVERGED! >6F41-V nrPDB Length = 596 Score = 1048 bits (2711), Expect = 0.0, Method: Composition-based stats. Identities = 596/596 (100%), Positives = 596/596 (100%) Query: 1 MPVCKNCHGTEFERDLSNANNDLVCKACGVVSEDNPIVSEVTFGETSAGAAVVQGSFIGA 60 MPVCKNCHGTEFERDLSNANNDLVCKACGVVSEDNPIVSEVTFGETSAGAAVVQGSFIGA Sbjct: 1 MPVCKNCHGTEFERDLSNANNDLVCKACGVVSEDNPIVSEVTFGETSAGAAVVQGSFIGA 60 Query: 61 GQSHAAFGGSSALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGR 120 GQSHAAFGGSSALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGR Sbjct: 61 GQSHAAFGGSSALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGR 120 Query: 121 RSQNVIASCLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVKKLHITELPLADPSL 180 RSQNVIASCLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVKKLHITELPLADPSL Sbjct: 121 RSQNVIASCLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVKKLHITELPLADPSL 180 Query: 181 FIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRT 240 FIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRT Sbjct: 181 FIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRT 240 Query: 241 HTEIVAVSHVAEETLQQRLNEFKNTKAAKLSVQKFRENDVEDGEARPPSFVKNRKKERKI 300 HTEIVAVSHVAEETLQQRLNEFKNTKAAKLSVQKFRENDVEDGEARPPSFVKNRKKERKI Sbjct: 241 HTEIVAVSHVAEETLQQRLNEFKNTKAAKLSVQKFRENDVEDGEARPPSFVKNRKKERKI 300 Query: 301 KDSLDKEEMFQTSEEALNKNPILTQVLGEQELSSKEVLFYLKQFSERRARVVERIKATNG 360 KDSLDKEEMFQTSEEALNKNPILTQVLGEQELSSKEVLFYLKQFSERRARVVERIKATNG Sbjct: 301 KDSLDKEEMFQTSEEALNKNPILTQVLGEQELSSKEVLFYLKQFSERRARVVERIKATNG 360 Query: 361 IDGENIYHEGSENETRKRKLSEVSIQNEHVEGEDKETEGTEEKVKKVKTKTSEEKKENES 420 IDGENIYHEGSENETRKRKLSEVSIQNEHVEGEDKETEGTEEKVKKVKTKTSEEKKENES Sbjct: 361 IDGENIYHEGSENETRKRKLSEVSIQNEHVEGEDKETEGTEEKVKKVKTKTSEEKKENES 420 Query: 421 GHFQDAIDGYSLETDPYCPRNLHLLPTTDTYLSKVSDDPDNLEDVDDEELNAHLLNEEAS 480 GHFQDAIDGYSLETDPYCPRNLHLLPTTDTYLSKVSDDPDNLEDVDDEELNAHLLNEEAS Sbjct: 421 GHFQDAIDGYSLETDPYCPRNLHLLPTTDTYLSKVSDDPDNLEDVDDEELNAHLLNEEAS 480 Query: 481 KLKERIWIGLNADFLLEQESKRLKQEADIATGNTSVKKKRTRRRNNTRSDEPTKTVDAAA 540 KLKERIWIGLNADFLLEQESKRLKQEADIATGNTSVKKKRTRRRNNTRSDEPTKTVDAAA Sbjct: 481 KLKERIWIGLNADFLLEQESKRLKQEADIATGNTSVKKKRTRRRNNTRSDEPTKTVDAAA 540 Query: 541 AIGLMSDLQDKSGLHAALKAAEESGDFTTADSVKNMLQKASFSKKINYDAIDGLFR 596 AIGLMSDLQDKSGLHAALKAAEESGDFTTADSVKNMLQKASFSKKINYDAIDGLFR Sbjct: 541 AIGLMSDLQDKSGLHAALKAAEESGDFTTADSVKNMLQKASFSKKINYDAIDGLFR 596 >6CNF-R nrPDB Length = 736 Score = 646 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 382/382 (100%), Positives = 382/382 (100%) Query: 1 MPVCKNCHGTEFERDLSNANNDLVCKACGVVSEDNPIVSEVTFGETSAGAAVVQGSFIGA 60 MPVCKNCHGTEFERDLSNANNDLVCKACGVVSEDNPIVSEVTFGETSAGAAVVQGSFIGA Sbjct: 1 MPVCKNCHGTEFERDLSNANNDLVCKACGVVSEDNPIVSEVTFGETSAGAAVVQGSFIGA 60 Query: 61 GQSHAAFGGSSALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGR 120 GQSHAAFGGSSALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGR Sbjct: 61 GQSHAAFGGSSALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGR 120 Query: 121 RSQNVIASCLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVKKLHITELPLADPSL 180 RSQNVIASCLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVKKLHITELPLADPSL Sbjct: 121 RSQNVIASCLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVKKLHITELPLADPSL 180 Query: 181 FIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRT 240 FIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRT Sbjct: 181 FIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRT 240 Query: 241 HTEIVAVSHVAEETLQQRLNEFKNTKAAKLSVQKFRENDVEDGEARPPSFVKNRKKERKI 300 HTEIVAVSHVAEETLQQRLNEFKNTKAAKLSVQKFRENDVEDGEARPPSFVKNRKKERKI Sbjct: 241 HTEIVAVSHVAEETLQQRLNEFKNTKAAKLSVQKFRENDVEDGEARPPSFVKNRKKERKI 300 Query: 301 KDSLDKEEMFQTSEEALNKNPILTQVLGEQELSSKEVLFYLKQFSERRARVVERIKATNG 360 KDSLDKEEMFQTSEEALNKNPILTQVLGEQELSSKEVLFYLKQFSERRARVVERIKATNG Sbjct: 301 KDSLDKEEMFQTSEEALNKNPILTQVLGEQELSSKEVLFYLKQFSERRARVVERIKATNG 360 Query: 361 IDGENIYHEGSENETRKRKLSE 382 IDGENIYHEGSENETRKRKLSE Sbjct: 361 IDGENIYHEGSENETRKRKLSE 382 Score = 307 bits (786), Expect = 1e-83, Method: Composition-based stats. Identities = 158/158 (100%), Positives = 158/158 (100%) Query: 439 PRNLHLLPTTDTYLSKVSDDPDNLEDVDDEELNAHLLNEEASKLKERIWIGLNADFLLEQ 498 PRNLHLLPTTDTYLSKVSDDPDNLEDVDDEELNAHLLNEEASKLKERIWIGLNADFLLEQ Sbjct: 579 PRNLHLLPTTDTYLSKVSDDPDNLEDVDDEELNAHLLNEEASKLKERIWIGLNADFLLEQ 638 Query: 499 ESKRLKQEADIATGNTSVKKKRTRRRNNTRSDEPTKTVDAAAAIGLMSDLQDKSGLHAAL 558 ESKRLKQEADIATGNTSVKKKRTRRRNNTRSDEPTKTVDAAAAIGLMSDLQDKSGLHAAL Sbjct: 639 ESKRLKQEADIATGNTSVKKKRTRRRNNTRSDEPTKTVDAAAAIGLMSDLQDKSGLHAAL 698 Query: 559 KAAEESGDFTTADSVKNMLQKASFSKKINYDAIDGLFR 596 KAAEESGDFTTADSVKNMLQKASFSKKINYDAIDGLFR Sbjct: 699 KAAEESGDFTTADSVKNMLQKASFSKKINYDAIDGLFR 736 >5IYC-M nrPDB Length = 316 Score = 287 bits (735), Expect = 8e-78, Method: Composition-based stats. Identities = 64/276 (23%), Positives = 122/276 (44%), Gaps = 51/276 (18%) Query: 21 NDLVCKACGVVSED----------------------------NPIVSEVTFGETSAGAAV 52 D++C CG+V D NP++S+ G+ S Sbjct: 30 GDMICPECGLVVGDRVIDVGSEWRTFSNDKATKDPSRVGDSQNPLLSD---GDLS----- 81 Query: 53 VQGSFIGAGQSHAAFG--GSSALESR------EATLNNARRKLRAVSYALHIPEYITDAA 104 + IG G A+F G+S ++R + + NA +++ ++ +++P I D Sbjct: 82 ---TMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKEITTMADRINLPRNIVDRT 138 Query: 105 FQWYKLALANNFVQGRRSQNVIASCLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKM 164 +K ++GR + + ++CLY+ACR+E + + ++S IG F + Sbjct: 139 NNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLI 198 Query: 165 VKKLHITELPLADPSLFIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIA 224 +K L T + L F+ F L L K++++ A +A++ + + GR P +A Sbjct: 199 LKALE-TSVDLITTGDFMSRFCSNLCLP-KQVQMA--ATHIARKAVELDLVPGRSPISVA 254 Query: 225 GACILLACRMNNLRRTHTEIVAVSHVAEETLQQRLN 260 A I +A + + +RT EI ++ VA+ T++Q Sbjct: 255 AAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYR 290 Score = 41.7 bits (96), Expect = 0.001, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 32/78 (41%) Query: 87 LRAVSYALHIPEYITDAAFQWYKLALANNFVQGRRSQNVIASCLYVACRKEKTHHMLIDF 146 + L +P+ + AA + A+ + V GR +V A+ +Y+A + + Sbjct: 215 MSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEI 274 Query: 147 SSRLQVSVYSIGATFLKM 164 V+ +I ++ + Sbjct: 275 GDIAGVADVTIRQSYRLI 292 >5WH1-A nrPDB Length = 211 Score = 250 bits (639), Expect = 1e-66, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 94/189 (49%), Gaps = 4/189 (2%) Query: 72 ALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGRRSQNVIASCLY 131 ++ S + + NA +++ ++ +++P I D +K ++GR + + ++CLY Sbjct: 1 SMSSSDRAMMNAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLY 60 Query: 132 VACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVKKLHITELPLADPSLFIQHFAEKLDL 191 +ACR+E + + ++S IG F ++K L T + L F+ F L L Sbjct: 61 IACRQEGVPRTFKEICAVSRISKKEIGRCFKLILKALE-TSVDLITTGDFMSRFCSNLCL 119 Query: 192 ADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRTHTEIVAVSHVA 251 K++++ A +A++ + + GR P +A A I +A + + +RT EI ++ VA Sbjct: 120 P-KQVQMA--ATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVA 176 Query: 252 EETLQQRLN 260 + T++Q Sbjct: 177 DVTIRQSYR 185 Score = 41.7 bits (96), Expect = 0.001, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 32/78 (41%) Query: 87 LRAVSYALHIPEYITDAAFQWYKLALANNFVQGRRSQNVIASCLYVACRKEKTHHMLIDF 146 + L +P+ + AA + A+ + V GR +V A+ +Y+A + + Sbjct: 110 MSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEI 169 Query: 147 SSRLQVSVYSIGATFLKM 164 V+ +I ++ + Sbjct: 170 GDIAGVADVTIRQSYRLI 187 >6GYK-M nrPDB Length = 345 Score = 229 bits (583), Expect = 3e-60, Method: Composition-based stats. Identities = 53/282 (18%), Positives = 102/282 (36%), Gaps = 46/282 (16%) Query: 19 ANNDLVCKACGVVS--------------------EDNPIVSEVTFGETSAGAAVVQGSFI 58 + D+VC CG+V D+P S V + I Sbjct: 39 SEGDVVCALCGLVLSDKLVDTRSEWRTFSNDDHNGDDP--SRVGEASNPLLDGNNLSTRI 96 Query: 59 GAG-QSHAAF-------GGSSALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKL 110 G G + F G + ++ ++ + A K+ + A +P+ + D A + YKL Sbjct: 97 GKGETTDMRFTKELNKAQGKNVMDKKDNEVQAAFAKITMLCDAAELPKIVKDCAKEAYKL 156 Query: 111 ALANNFVQGRRSQNVIASCLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVK---- 166 ++G+ ++++A+ + + CR+ + + S + V G T L ++K Sbjct: 157 CHDEKTLKGKSMESIMAASILIGCRRAEVARTFKEIQSLIHVKTKEFGKT-LNIMKNILR 215 Query: 167 --------KLHITELPLADPSLFIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGR 218 K+ + A +I F L L ++V A A++ + G+ Sbjct: 216 GKSEDGFLKIDTDNMSGAQNLTYIPRFCSHLGLP---MQVTTSAEYTAKKCKEIKEIAGK 272 Query: 219 RPAGIAGACILLACRMNNLRRTHTEIVAVSHVAEETLQQRLN 260 P IA I L + + T ++ V E T++ Sbjct: 273 SPITIAVVSIYLNILLFQIPITAAKVGQTLQVTEGTIKSGYK 314 Score = 38.2 bits (87), Expect = 0.010, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 3/88 (3%) Query: 182 IQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRTH 241 I + +L K+A KL + +G+ I A IL+ CR + RT Sbjct: 133 ITMLCDAAELPKIVKDCAKEAYKL---CHDEKTLKGKSMESIMAASILIGCRRAEVARTF 189 Query: 242 TEIVAVSHVAEETLQQRLNEFKNTKAAK 269 EI ++ HV + + LN KN K Sbjct: 190 KEIQSLIHVKTKEFGKTLNIMKNILRGK 217 >1AIS-B nrPDB Length = 200 Score = 215 bits (548), Expect = 4e-56, Method: Composition-based stats. Identities = 50/190 (26%), Positives = 100/190 (52%), Gaps = 4/190 (2%) Query: 74 ESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGRRSQNVIASCLYVA 133 ++ E L A +L ++ L +P ++ + A + Y+ A+ ++GR ++V+A+C+Y A Sbjct: 3 DAAERNLAFALSELDRITAQLKLPRHVEEEAARLYREAVRKGLIRGRSIESVMAACVYAA 62 Query: 134 CRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVKKLHITELPL-ADPSLFIQHFAEKLDLA 192 CR K L + + +V IG ++ + + L++T L P+ ++ FA++L L+ Sbjct: 63 CRLLKVPRTLDEIADIARVDKKEIGRSYRFIARNLNLTPKKLFVKPTDYVNKFADELGLS 122 Query: 193 DKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRTHTEIVAVSHVAE 252 + KV + A+++ K + G+ PAG+ A + +A + +RT E+ V+ V E Sbjct: 123 E---KVRRRAIEILDEAYKRGLTSGKSPAGLVAAALYIASLLEGEKRTQREVAEVARVTE 179 Query: 253 ETLQQRLNEF 262 T++ R E Sbjct: 180 VTVRNRYKEL 189 Score = 45.1 bits (105), Expect = 8e-05, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 35/84 (41%) Query: 87 LRAVSYALHIPEYITDAAFQWYKLALANNFVQGRRSQNVIASCLYVACRKEKTHHMLIDF 146 + + L + E + A + A G+ ++A+ LY+A E + Sbjct: 112 VNKFADELGLSEKVRRRAIEILDEAYKRGLTSGKSPAGLVAAALYIASLLEGEKRTQREV 171 Query: 147 SSRLQVSVYSIGATFLKMVKKLHI 170 + +V+ ++ + ++V+KL I Sbjct: 172 AEVARVTEVTVRNRYKELVEKLKI 195 >4ROE-A nrPDB Length = 360 Score = 174 bits (441), Expect = 9e-44, Method: Composition-based stats. Identities = 61/341 (17%), Positives = 125/341 (36%), Gaps = 69/341 (20%) Query: 74 ESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGRRSQN---VIASCL 130 E + R++R + L +P D A +Y+ A ++ ++ R Q ++ C+ Sbjct: 4 EQVSRSQQRGLRRVRDLCRVLQLPPTFEDTAVAYYQQAYRHSGIRAARLQKKEVLVGCCV 63 Query: 131 YVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVK--KLHITELPLADPSLFIQHFAEK 188 + CR+ + + L + +T++++VK L + L LA+ ++ + Sbjct: 64 LITCRQHNWPLTMGAICTLLYADLDVFSSTYMQIVKLLGLDVPSLCLAE---LVKTYCSS 120 Query: 189 LDL-----------ADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLA------ 231 L + K K++ ++L + ++ W+ GR P + A LA Sbjct: 121 FKLFQASPSVPAKYVEDKEKMLSRTMQLVELANETWLVTGRHPLPVITAATFLAWQSLQP 180 Query: 232 -----------CRMNNL-------RRTHTEIVAVSHVAEETLQQRLNEFKNTKAAK---- 269 C++ N+ R + + +AE+ R+ K Sbjct: 181 ADRLSCSLARFCKLANVDLPYPASSRLQELLAVLLRMAEQLAWLRVLRLDKRSVVKHIGD 240 Query: 270 -------LSVQKFREN--DVEDGEARPPSFVKNRKKERKIKDSLDKEEMFQTSEEALNKN 320 L FR+ +VE E PP + + + + +SL + + + AL Sbjct: 241 LLQHRQSLVRSAFRDGTAEVETREKEPPGWGQGQGEGEVGNNSLGLPQGKRPASPALLLP 300 Query: 321 PIL-------------TQVLGEQELSSKEVLFYLKQFSERR 348 P + + V G++ +S E+ YL+ E R Sbjct: 301 PCMLKSPKRICPVPPVSTVTGDENISDSEIEQYLRTPQEVR 341 >1ZP2-A nrPDB Length = 235 Score = 39.4 bits (90), Expect = 0.005, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 61/158 (38%), Gaps = 13/158 (8%) Query: 84 RRKLRAVSYALHIPEYITDAAFQWYKL-ALANNFVQGRRSQNVIASCLYVACRKEKTHHM 142 + ++ L + + + A + L N +G + ++A+C+Y++C+ E+ Sbjct: 32 WKVVQTFGDRLRLRQRVLATAIVLLRRYMLKKNEEKGFSLEALVATCIYLSCKVEECPVH 91 Query: 143 LIDFSS--------RLQVSVYSIGATFLKMVKKLHITELPLADPSLFIQHFAEKLDLADK 194 + + ++++S +I +++ L + + Q F + + Sbjct: 92 IRTICNEANDLWSLKVKLSRSNISEIEFEIISVLDAFLIVHHPYTSLEQAFHDGI----I 147 Query: 195 KIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLAC 232 K ++ A + + P +A A +L++C Sbjct: 148 NQKQLEFAWSIVNDSYASSLCLMAHPHQLAYAALLISC 185 >5Z57-V nrPDB Length = 908 Score = 39.0 bits (89), Expect = 0.006, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 69/148 (46%), Gaps = 22/148 (14%) Query: 387 NEHVEGEDKETEGTEEKVKKVKTKTSEEKKENESG-HFQDAIDGYSLETDPYCPRNLHLL 445 N+ + E ++ G +E + + ++ + + +N SG +++D I Y+ + D + Sbjct: 740 NDRKQKERRQEHGHQETRTERERRSEKHRDQNSSGSNWRDPITKYTSDKD---------V 790 Query: 446 PTTDTYLSKVSDDPDNLEDVDDEELNAHLLNEEASKLKERIWIGLNADFLLEQE--SKRL 503 P+ S+V++D D+E++ L N+ K+R G + E E + R+ Sbjct: 791 PSERNNYSRVAND-------RDQEMHIDLENKHGDPKKKR---GERRNSFSENEKHTHRI 840 Query: 504 KQEADIATGNTSVKKKRTRRRNNTRSDE 531 K + + S K+ R+ + +RSDE Sbjct: 841 KDSENFRRKDRSKSKEMNRKHSGSRSDE 868 >4ELJ-A nrPDB Length = 656 Score = 34.7 bits (78), Expect = 0.11, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 47/114 (41%), Gaps = 8/114 (7%) Query: 88 RAVSYALHIPEYITDAAFQWYKLALANNFVQGRRSQN---VIASCLYVAC-RKEKTHHML 143 A+ L IP+++ + A+ ++ + + V G Q + C+++A ++ Sbjct: 9 TALCQKLKIPDHVRERAWLTWEKVSSVDGVLGGYIQKKKELWGICIFIAAVDLDEMSFTF 68 Query: 144 IDFSSRLQVSVYSIGATFLKMVKKLHITELPLADPSLFIQHFAEKLDLADKKIK 197 + +++SV+ F ++K++ + S ++ + L K + Sbjct: 69 TELQKNIEISVHK----FFNLLKEIDTSTKVDNAMSRLLKKYDVLFALFSKLER 118 >2QDJ-A nrPDB Length = 304 Score = 34.7 bits (78), Expect = 0.11, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 47/114 (41%), Gaps = 8/114 (7%) Query: 88 RAVSYALHIPEYITDAAFQWYKLALANNFVQGRRSQN---VIASCLYVAC-RKEKTHHML 143 A+ L IP+++ + A+ ++ + + V G Q + C+++A ++ Sbjct: 7 TALCQKLKIPDHVRERAWLTWEKVSSVDGVLGGYIQKKKELWGICIFIAAVDLDEMSFTF 66 Query: 144 IDFSSRLQVSVYSIGATFLKMVKKLHITELPLADPSLFIQHFAEKLDLADKKIK 197 + +++SV+ F ++K++ + S ++ + L K + Sbjct: 67 TELQKNIEISVHK----FFNLLKEIDTSTKVDNAMSRLLKKYDVLFALFSKLER 116 >1RLY-A nrPDB Length = 60 Score = 34.0 bits (76), Expect = 0.22, Method: Composition-based stats. Identities = 7/17 (41%), Positives = 10/17 (58%) Query: 21 NDLVCKACGVVSEDNPI 37 D++C CG+V D I Sbjct: 30 GDMICPECGLVVGDRVI 46 >2W99-A nrPDB Length = 271 Score = 33.2 bits (74), Expect = 0.35, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 9/137 (6%) Query: 77 EATLNNARRKLRA-----VSYALHIPEYITDAAFQWYKLALANNFVQGRRSQNVIASCLY 131 + + + RK+ A V E + A + L+ V+ R Q + A+C++ Sbjct: 49 QKEVLPSMRKIVATWMLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMF 108 Query: 132 VACR-KEKTHHMLIDFS--SRLQVSVYSIGATFLKMVKKLHITELPLADPSLFIQHFAEK 188 VA + KE + + + L +V KL L P FI+HF K Sbjct: 109 VASKMKETIPLTAEKLCIYTDNSIRPEELLQMELLLVNKLKW-NLAAMTPHDFIEHFLSK 167 Query: 189 LDLADKKIKVVKDAVKL 205 + A++ ++++ + Sbjct: 168 MPEAEENKQIIRKHAQT 184 >5O9B-A nrPDB Length = 68 Score = 32.8 bits (73), Expect = 0.45, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 14/27 (51%) Query: 4 CKNCHGTEFERDLSNANNDLVCKACGV 30 C NC T NAN D VC ACG+ Sbjct: 26 CANCQTTTTTLWRRNANGDPVCNACGL 52 >4HC9-A nrPDB Length = 115 Score = 32.8 bits (73), Expect = 0.45, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 14/27 (51%) Query: 4 CKNCHGTEFERDLSNANNDLVCKACGV 30 C NC T NAN D VC ACG+ Sbjct: 62 CANCQTTTTTLWRRNANGDPVCNACGL 88 >3DFX-A nrPDB Length = 63 Score = 32.8 bits (73), Expect = 0.45, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 14/27 (51%) Query: 4 CKNCHGTEFERDLSNANNDLVCKACGV 30 C NC T NAN D VC ACG+ Sbjct: 10 CANCQTTTTTLWRRNANGDPVCNACGL 36 >6EM5-I nrPDB Length = 663 Score = 32.8 bits (73), Expect = 0.49, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 16/142 (11%) Query: 296 KERKIKDSLDKEEMFQTSEEALNKNPILTQVLGEQELSSKEVLFYLKQFSERRARVVERI 355 K+RK +DSL + +FQ + E +++N I + + ++ ++ + +VE + Sbjct: 17 KKRKHEDSLLEGNVFQNAPEDMDENTIYSAKGSSWDEEEQDYEMVPRKNRSDTSNLVEGL 76 Query: 356 KATNGIDGENIYHEGSENETRKRKLSEVSIQ--------NEHVEGEDKETE-GTEEKVKK 406 E H+ E + E S NE E E KE E TEEK+ + Sbjct: 77 PIKVNGKVERKLHKAQEKPKDDDEEDEDSNDSSEDDEGPNEEQEAEAKEDEPDTEEKILQ 136 Query: 407 VK-------TKTSEEKKENESG 421 +K TK EE +EN + Sbjct: 137 LKEDIADLVTKVMEEPEENTAA 158 >2I1J-A nrPDB Length = 575 Score = 32.4 bits (72), Expect = 0.50, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 10/150 (6%) Query: 266 KAAKLSVQKFRENDVEDGEARPPSFVKNRKKERKIKDSLDK--EEMFQTSEEALNKNPIL 323 + KL+ Q RE + AR + KK+++ +D L + EEM ++ L ++ Sbjct: 310 REEKLAKQAQREKLQLEIAARE----RAEKKQQEYQDRLRQMQEEMERSQANLLEAQDMI 365 Query: 324 TQVLGEQELSSKEVLFYLKQFSERRARVVERIKATNGIDGENIYHEGSENETRKRKLSEV 383 + L EQ + L+Q +++R++ T ++ + E+E R ++ EV Sbjct: 366 LR-LEEQLRQLQAAKEELEQRQNELQAMMQRLEETKNMEAAE--RQKLEDEIRAKQ-EEV 421 Query: 384 SIQNEHVEGEDKETEGTEEKVKKVKTKTSE 413 S + VE +D ET +E+V+ + K E Sbjct: 422 SRIQQEVELKDSETRRLQEEVEDARRKQDE 451 >4BXZ-X nrPDB Length = 594 Score = 32.0 bits (71), Expect = 0.73, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 26/124 (20%) Query: 424 QDAIDGYSLETDPY----CPRNL--HLLPTTDTYLSKVSDDPDNLEDVDDEELNAHLLNE 477 +D IDG E Y C +L HL + + ++VS+D D +DV + +N H N+ Sbjct: 113 KDTIDGLMSEDSKYYCELCDPSLYAHLETSKE---AEVSEDEDYHDDVY-KPVNDHDDND 168 Query: 478 EASKLKERIWIGLNADFLLEQESKRLKQEADIATGNTSVKKKRTRRRNNTRSDEPTKTVD 537 AD L++ES R ++ + + +K K+ ++ N ++ + K++D Sbjct: 169 --------------ADVFLDEESPRKRKRSPDSAKGIHIKSKQVKKSNGSK--KRNKSID 212 Query: 538 AAAA 541 AA + Sbjct: 213 AAKS 216 >2QVH-A nrPDB Length = 327 Score = 31.7 bits (70), Expect = 0.87, Method: Composition-based stats. Identities = 15/38 (39%), Positives = 24/38 (63%) Query: 528 RSDEPTKTVDAAAAIGLMSDLQDKSGLHAALKAAEESG 565 R+++P + DA AA ++ +Q G+ AAL+ AEE G Sbjct: 184 RAEDPLRVRDAEAADVVVLKVQPLGGVRAALRLAEECG 221 >3FAY-A nrPDB Length = 387 Score = 30.5 bits (67), Expect = 2.2, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 1/107 (0%) Query: 442 LHLLPTTDTYLSK-VSDDPDNLEDVDDEELNAHLLNEEASKLKERIWIGLNADFLLEQES 500 +LL T TYL+K + P N + + L N +++ +E + + L L E+ Sbjct: 18 FYLLQTNPTYLAKLIFQMPQNKSTKFMDSVIFTLYNYASNQREEYLLLRLFKTALQEEIK 77 Query: 501 KRLKQEADIATGNTSVKKKRTRRRNNTRSDEPTKTVDAAAAIGLMSD 547 ++ Q +I TGN +V K R + + A +M D Sbjct: 78 SKVDQIQEIVTGNPTVIKMVVSFNRGARGQNALRQILAPVVKEIMDD 124 >2VPX-A nrPDB Length = 765 Score = 30.1 bits (66), Expect = 2.4, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 26/58 (44%) Query: 180 LFIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNNL 237 +++ + L L + +K + V+ + +DW EGR P G A I L C+ Sbjct: 542 EYLETRLQSLGLDLETMKGMGTLVQRGKPWLEDWEKEGRLPFGTASGKIELYCQRFKE 599 >6O00-A nrPDB Length = 820 Score = 29.7 bits (65), Expect = 3.6, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 38/99 (38%), Gaps = 11/99 (11%) Query: 69 GSSALESREATLNNARRKLRAV------SYALHIPEYITDAAFQWYKLALANNFVQGRRS 122 G+ + E+ + + R+L+ + S +P+ +TD KL++ N + Sbjct: 525 GNLSAENNRYIVIDGLRELKRLKVLRLKSNLSKLPQVVTDVGVHLQKLSINNEGTKLIVL 584 Query: 123 QNV-----IASCLYVACRKEKTHHMLIDFSSRLQVSVYS 156 ++ + + C E+ H + + ++ + Sbjct: 585 NSLKKMVNLTELELIRCDLERIPHSIFSLHNLQEIDLKD 623 >1KXU-A nrPDB Length = 333 Score = 29.7 bits (65), Expect = 3.6, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 85 RKLRAVSYALH--IPEYITDAAFQWYKLALANNFVQGRRSQNVIASCLYVACRKEK 138 ++L +P + A ++K NN V + ++ +C ++AC+ ++ Sbjct: 72 KRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDE 127 >2Y4T-A nrPDB Length = 450 Score = 29.7 bits (65), Expect = 4.1, Method: Composition-based stats. Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 19/225 (8%) Query: 279 DVEDGEARPPSFVKNRKKERKIKDSLDKEEMFQTSEEALNKNPILTQVLGEQELSSKEVL 338 D E E R F+K + + I D ++ + EA K L LG+ ELS EV Sbjct: 176 DAELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVR 235 Query: 339 FYLKQFSERRARVVERIKATNGIDGENIYHEGSENETRKRKLSEVSIQNEHVEGEDKETE 398 LK + R K + N E +E R + ++ + + E V Sbjct: 236 ECLK-LDQDHKRCFAHYKQVKKL---NKLIESAEELIRDGRYTDATSKYESV-------M 284 Query: 399 GTEEKVKKVKTKTSEEKKENESGHFQDAIDGYSLETDPYCPRNLHLLPTTDTYLSKVSDD 458 TE + + ++ E S D +E C L + P L K + Sbjct: 285 KTEPSIAEYTVRSKERICHCFSK------DEKPVEAIRVCSEVLQMEPDNVNAL-KDRAE 337 Query: 459 PDNLEDVDDEELNAHLLNEEASKLKERIWIGL-NADFLLEQESKR 502 +E++ DE + + +E ++ ++I GL A LL+Q KR Sbjct: 338 AYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQSQKR 382 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.126 0.324 Lambda K H 0.267 0.0390 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,429,730 Number of Sequences: 36641 Number of extensions: 793056 Number of successful extensions: 2484 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 73 Number of HSP's that attempted gapping in prelim test: 2338 Number of HSP's gapped (non-prelim): 161 length of query: 596 length of database: 10,336,785 effective HSP length: 103 effective length of query: 493 effective length of database: 6,562,762 effective search space: 3235441666 effective search space used: 3235441666 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 62 (28.6 bits)