BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= P29055
(345 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
6GYK-M nrPDB 712 0.0
5IYC-M nrPDB 184 7e-47
3K1F-M nrPDB 147 9e-36
5WH1-A nrPDB 105 3e-23
1AIS-B nrPDB 73 2e-13
1RLY-A nrPDB 55 4e-08
6CNF-R nrPDB 42 5e-04
6F41-V nrPDB 42 5e-04
3IWZ-A nrPDB 29 3.2
2M9W-A nrPDB 28 5.9
>6GYK-M nrPDB
Length = 345
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/345 (100%), Positives = 345/345 (100%)
Query: 1 MMTRESIDKRAGRRGPNLNIVLTCPECKVYPPKIVERFSEGDVVCALCGLVLSDKLVDTR 60
MMTRESIDKRAGRRGPNLNIVLTCPECKVYPPKIVERFSEGDVVCALCGLVLSDKLVDTR
Sbjct: 1 MMTRESIDKRAGRRGPNLNIVLTCPECKVYPPKIVERFSEGDVVCALCGLVLSDKLVDTR 60
Query: 61 SEWRTFSNDDHNGDDPSRVGEASNPLLDGNNLSTRIGKGETTDMRFTKELNKAQGKNVMD 120
SEWRTFSNDDHNGDDPSRVGEASNPLLDGNNLSTRIGKGETTDMRFTKELNKAQGKNVMD
Sbjct: 61 SEWRTFSNDDHNGDDPSRVGEASNPLLDGNNLSTRIGKGETTDMRFTKELNKAQGKNVMD 120
Query: 121 KKDNEVQAAFAKITMLCDAAELPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAASILIGC 180
KKDNEVQAAFAKITMLCDAAELPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAASILIGC
Sbjct: 121 KKDNEVQAAFAKITMLCDAAELPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAASILIGC 180
Query: 181 RRAEVARTFKEIQSLIHVKTKEFGKTLNIMKNILRGKSEDGFLKIDTDNMSGAQNLTYIP 240
RRAEVARTFKEIQSLIHVKTKEFGKTLNIMKNILRGKSEDGFLKIDTDNMSGAQNLTYIP
Sbjct: 181 RRAEVARTFKEIQSLIHVKTKEFGKTLNIMKNILRGKSEDGFLKIDTDNMSGAQNLTYIP 240
Query: 241 RFCSHLGLPMQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAKVGQ 300
RFCSHLGLPMQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAKVGQ
Sbjct: 241 RFCSHLGLPMQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAKVGQ 300
Query: 301 TLQVTEGTIKSGYKILYEHRDKLVDPQLIANGVVSLDNLPGVEKK 345
TLQVTEGTIKSGYKILYEHRDKLVDPQLIANGVVSLDNLPGVEKK
Sbjct: 301 TLQVTEGTIKSGYKILYEHRDKLVDPQLIANGVVSLDNLPGVEKK 345
>5IYC-M nrPDB
Length = 316
Score = 184 bits (466), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 168/298 (56%), Gaps = 19/298 (6%)
Query: 22 LTCPECKVYPPKI-VERFSEGDVVCALCGLVLSDKLVDTRSEWRTFSNDDHNGDDPSRVG 80
+TCP +P I VE + GD++C CGLV+ D+++D SEWRTFSND DPSRVG
Sbjct: 13 VTCPN---HPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKAT-KDPSRVG 68
Query: 81 EASNPLLDGNNLSTRIGKGETTDMRFTKELN-KAQGKNVMDKKDNEVQAAFAKITMLCDA 139
++ NPLL +LST IGKG T F + N K Q + M D + AF +IT + D
Sbjct: 69 DSQNPLLSDGDLSTMIGKG-TGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKEITTMADR 127
Query: 140 AELPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAASILIGCRRAEVARTFKEIQSLIHVK 199
LP+ + D +K +++K+LKG++ ++I +A + I CR+ V RTFKEI ++ +
Sbjct: 128 INLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRIS 187
Query: 200 TKEFGKTLNIMKNILRGKSEDGFLKIDTDNMSGAQNLTYIPRFCSHLGLPMQVTTSAEYT 259
KE G+ + IL+ L+ D ++ ++ RFCS+L LP QV +A +
Sbjct: 188 KKEIGRCFKL---ILKA------LETSVDLITTGD---FMSRFCSNLCLPKQVQMAATHI 235
Query: 260 AKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAKVGQTLQVTEGTIKSGYKILY 317
A+K E+ + G+SPI++A +IY+ T ++G V + TI+ Y+++Y
Sbjct: 236 ARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIY 293
>3K1F-M nrPDB
Length = 197
Score = 147 bits (370), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 68/68 (100%), Positives = 68/68 (100%)
Query: 1 MMTRESIDKRAGRRGPNLNIVLTCPECKVYPPKIVERFSEGDVVCALCGLVLSDKLVDTR 60
MMTRESIDKRAGRRGPNLNIVLTCPECKVYPPKIVERFSEGDVVCALCGLVLSDKLVDTR
Sbjct: 1 MMTRESIDKRAGRRGPNLNIVLTCPECKVYPPKIVERFSEGDVVCALCGLVLSDKLVDTR 60
Query: 61 SEWRTFSN 68
SEWRTFSN
Sbjct: 61 SEWRTFSN 68
>5WH1-A nrPDB
Length = 211
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 119 MDKKDNEVQAAFAKITMLCDAAELPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAASILI 178
M D + AF +IT + D LP+ + D +K +++K+LKG++ ++I +A + I
Sbjct: 2 MSSSDRAMMNAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYI 61
Query: 179 GCRRAEVARTFKEIQSLIHVKTKEFGKTLNIMKNILRGKSEDGFLKIDTDNMSGAQNLTY 238
CR+ V RTFKEI ++ + KE G+ + IL+ L D MS
Sbjct: 62 ACRQEGVPRTFKEICAVSRISKKEIGRCFKL---ILKALETSVDLITTGDFMS------- 111
Query: 239 IPRFCSHLGLPMQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAKV 298
RFCS+L LP QV +A + A+K E+ + G+SPI++A +IY+ T ++
Sbjct: 112 --RFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEI 169
Query: 299 GQTLQVTEGTIKSGYKILY 317
G V + TI+ Y+++Y
Sbjct: 170 GDIAGVADVTIRQSYRLIY 188
>1AIS-B nrPDB
Length = 200
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 10/201 (4%)
Query: 118 VMDKKDNEVQAAFAKITMLCDAAELPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAASIL 177
V D + + A +++ + +LP+ V++ A Y+ + ++G+S+ES+MAA +
Sbjct: 1 VSDAAERNLAFALSELDRITAQLKLPRHVEEEAARLYREAVRKGLIRGRSIESVMAACVY 60
Query: 178 IGCRRAEVARTFKEIQSLIHVKTKEFGKTLNIMKNILRGKSEDGFLKIDTDNMSGAQNLT 237
CR +V RT EI + V KE G++ + L + F+K TD
Sbjct: 61 AACRLLKVPRTLDEIADIARVDKKEIGRSYRFIARNLNLTPKKLFVK-PTD--------- 110
Query: 238 YIPRFCSHLGLPMQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAK 297
Y+ +F LGL +V A + + +GKSP + ++Y+ LL T +
Sbjct: 111 YVNKFADELGLSEKVRRRAIEILDEAYKRGLTSGKSPAGLVAAALYIASLLEGEKRTQRE 170
Query: 298 VGQTLQVTEGTIKSGYKILYE 318
V + +VTE T+++ YK L E
Sbjct: 171 VAEVARVTEVTVRNRYKELVE 191
>1RLY-A nrPDB
Length = 60
Score = 55.1 bits (131), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
Query: 22 LTCPECKVYPPKI-VERFSEGDVVCALCGLVLSDKLVDTRSEWRTFSND 69
+TCP +P I VE + GD++C CGLV+ D+++D SEWRTFSND
Sbjct: 13 VTCPN---HPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSND 58
>6CNF-R nrPDB
Length = 736
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 82/200 (41%), Gaps = 16/200 (8%)
Query: 115 GKNVMDKKDNEVQAAFAKITMLCDAAELPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAA 174
G + ++ ++ + A K+ + A +P+ + D A + YKL ++G+ ++++A+
Sbjct: 69 GSSALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGRRSQNVIAS 128
Query: 175 SILIGCRRAEVARTFKEIQSLIHVKTKEFGKT-LNIMKNILRGKSEDGFLKIDTDNMSGA 233
+ + CR+ + + S + V G T L ++K K+ + A
Sbjct: 129 CLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVK------------KLHITELPLA 176
Query: 234 QNLTYIPRFCSHLGLP---MQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQ 290
+I F L L ++V A A++ + G+ P IA I L +
Sbjct: 177 DPSLFIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNN 236
Query: 291 IPITAAKVGQTLQVTEGTIK 310
+ T ++ V E T++
Sbjct: 237 LRRTHTEIVAVSHVAEETLQ 256
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 144 KIVKDCAKEAYKLCHDEKTLKGKSMESIMAASILIGCRRAEVARTFKEIQSLIHVKTKEF 203
K+VKD K A ++ D +G+ I A IL+ CR + RT EI ++ HV +
Sbjct: 197 KVVKDAVKLAQRMSKDW-MFEGRRPAGIAGACILLACRMNNLRRTHTEIVAVSHVAEETL 255
Query: 204 GKTLNIMKN 212
+ LN KN
Sbjct: 256 QQRLNEFKN 264
>6F41-V nrPDB
Length = 596
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 82/200 (41%), Gaps = 16/200 (8%)
Query: 115 GKNVMDKKDNEVQAAFAKITMLCDAAELPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAA 174
G + ++ ++ + A K+ + A +P+ + D A + YKL ++G+ ++++A+
Sbjct: 69 GSSALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANNFVQGRRSQNVIAS 128
Query: 175 SILIGCRRAEVARTFKEIQSLIHVKTKEFGKT-LNIMKNILRGKSEDGFLKIDTDNMSGA 233
+ + CR+ + + S + V G T L ++K K+ + A
Sbjct: 129 CLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVK------------KLHITELPLA 176
Query: 234 QNLTYIPRFCSHLGLP---MQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQ 290
+I F L L ++V A A++ + G+ P IA I L +
Sbjct: 177 DPSLFIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGIAGACILLACRMNN 236
Query: 291 IPITAAKVGQTLQVTEGTIK 310
+ T ++ V E T++
Sbjct: 237 LRRTHTEIVAVSHVAEETLQ 256
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 144 KIVKDCAKEAYKLCHDEKTLKGKSMESIMAASILIGCRRAEVARTFKEIQSLIHVKTKEF 203
K+VKD K A ++ D +G+ I A IL+ CR + RT EI ++ HV +
Sbjct: 197 KVVKDAVKLAQRMSKD-WMFEGRRPAGIAGACILLACRMNNLRRTHTEIVAVSHVAEETL 255
Query: 204 GKTLNIMKN 212
+ LN KN
Sbjct: 256 QQRLNEFKN 264
>3IWZ-A nrPDB
Length = 230
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 10/88 (11%)
Query: 116 KNVMDKKDNEVQAAFAKITMLCDAAELPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAAS 175
K ++D + AF +T + + + D +KE + H + T S + + +
Sbjct: 143 KRLLDTTRKASRLAFLDVT-----DRIVRTLHDLSKEPEAMSHPQGTQLRVSRQEL---A 194
Query: 176 ILIGCRRAEVARTFKEIQS--LIHVKTK 201
L+GC R R K++Q+ L+H + K
Sbjct: 195 RLVGCSREMAGRVLKKLQADGLLHARGK 222
>2M9W-A nrPDB
Length = 63
Score = 28.1 bits (61), Expect = 5.9, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 22 LTCPECKVYPPKIVERFSEGDVVCALCGLVL 52
L+C C+ + R +EG+ VC CGL +
Sbjct: 11 LSCANCQTTTTTLWRRNAEGEPVCNACGLYM 41
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
6GYK-M nrPDB 542 e-155
5IYC-M nrPDB 409 e-114
5WH1-A nrPDB 256 9e-69
6CNF-R nrPDB 233 1e-61
6F41-V nrPDB 229 1e-60
1AIS-B nrPDB 228 2e-60
3K1F-M nrPDB 137 7e-33
1RLY-A nrPDB 93 3e-19
Sequences not found previously or not previously below threshold:
4ROE-A nrPDB 66 2e-11
1ZP2-A nrPDB 36 0.025
6E8E-B nrPDB 32 0.47
4NST-B nrPDB 30 1.7
5KYJ-A nrPDB 30 1.8
4NQA-B nrPDB 30 1.8
2F00-A nrPDB 30 2.0
6N9E-15 nrPDB 30 2.0
3TTD-A nrPDB 29 2.4
5G4J-A nrPDB 29 3.9
4R12-A nrPDB 28 5.1
6EL3-D nrPDB 28 6.0
1KXU-A nrPDB 27 9.7
>6GYK-M nrPDB
Length = 345
Score = 542 bits (1397), Expect = e-155, Method: Composition-based stats.
Identities = 345/345 (100%), Positives = 345/345 (100%)
Query: 1 MMTRESIDKRAGRRGPNLNIVLTCPECKVYPPKIVERFSEGDVVCALCGLVLSDKLVDTR 60
MMTRESIDKRAGRRGPNLNIVLTCPECKVYPPKIVERFSEGDVVCALCGLVLSDKLVDTR
Sbjct: 1 MMTRESIDKRAGRRGPNLNIVLTCPECKVYPPKIVERFSEGDVVCALCGLVLSDKLVDTR 60
Query: 61 SEWRTFSNDDHNGDDPSRVGEASNPLLDGNNLSTRIGKGETTDMRFTKELNKAQGKNVMD 120
SEWRTFSNDDHNGDDPSRVGEASNPLLDGNNLSTRIGKGETTDMRFTKELNKAQGKNVMD
Sbjct: 61 SEWRTFSNDDHNGDDPSRVGEASNPLLDGNNLSTRIGKGETTDMRFTKELNKAQGKNVMD 120
Query: 121 KKDNEVQAAFAKITMLCDAAELPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAASILIGC 180
KKDNEVQAAFAKITMLCDAAELPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAASILIGC
Sbjct: 121 KKDNEVQAAFAKITMLCDAAELPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAASILIGC 180
Query: 181 RRAEVARTFKEIQSLIHVKTKEFGKTLNIMKNILRGKSEDGFLKIDTDNMSGAQNLTYIP 240
RRAEVARTFKEIQSLIHVKTKEFGKTLNIMKNILRGKSEDGFLKIDTDNMSGAQNLTYIP
Sbjct: 181 RRAEVARTFKEIQSLIHVKTKEFGKTLNIMKNILRGKSEDGFLKIDTDNMSGAQNLTYIP 240
Query: 241 RFCSHLGLPMQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAKVGQ 300
RFCSHLGLPMQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAKVGQ
Sbjct: 241 RFCSHLGLPMQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAKVGQ 300
Query: 301 TLQVTEGTIKSGYKILYEHRDKLVDPQLIANGVVSLDNLPGVEKK 345
TLQVTEGTIKSGYKILYEHRDKLVDPQLIANGVVSLDNLPGVEKK
Sbjct: 301 TLQVTEGTIKSGYKILYEHRDKLVDPQLIANGVVSLDNLPGVEKK 345
>5IYC-M nrPDB
Length = 316
Score = 409 bits (1050), Expect = e-114, Method: Composition-based stats.
Identities = 108/298 (36%), Positives = 165/298 (55%), Gaps = 19/298 (6%)
Query: 22 LTCPECKVYPPKI-VERFSEGDVVCALCGLVLSDKLVDTRSEWRTFSNDDHNGDDPSRVG 80
+TCP +P I VE + GD++C CGLV+ D+++D SEWRTFSND DPSRVG
Sbjct: 13 VTCPN---HPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKAT-KDPSRVG 68
Query: 81 EASNPLLDGNNLSTRIGKGETTDMRFTKELN-KAQGKNVMDKKDNEVQAAFAKITMLCDA 139
++ NPLL +LST IGKG T F + N K Q + M D + AF +IT + D
Sbjct: 69 DSQNPLLSDGDLSTMIGKG-TGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKEITTMADR 127
Query: 140 AELPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAASILIGCRRAEVARTFKEIQSLIHVK 199
LP+ + D +K +++K+LKG++ ++I +A + I CR+ V RTFKEI ++ +
Sbjct: 128 INLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRIS 187
Query: 200 TKEFGKTLNIMKNILRGKSEDGFLKIDTDNMSGAQNLTYIPRFCSHLGLPMQVTTSAEYT 259
KE G+ + IL+ L D ++ RFCS+L LP QV +A +
Sbjct: 188 KKEIGRCFKL---ILKALETSVDLITTGD---------FMSRFCSNLCLPKQVQMAATHI 235
Query: 260 AKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAKVGQTLQVTEGTIKSGYKILY 317
A+K E+ + G+SPI++A +IY+ T ++G V + TI+ Y+++Y
Sbjct: 236 ARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIY 293
Score = 56.7 bits (135), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Query: 239 IPRFCSHLGLPMQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAKV 298
I + LP + K+ E K + G++ IA +Y+ +P T ++
Sbjct: 121 ITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEI 180
Query: 299 GQTLQVTEGTIKSGYKILYEHRDKLVDPQLIANG 332
++++ I +K++ + + VD LI G
Sbjct: 181 CAVSRISKKEIGRCFKLILKALETSVD--LITTG 212
>5WH1-A nrPDB
Length = 211
Score = 256 bits (654), Expect = 9e-69, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 12/200 (6%)
Query: 118 VMDKKDNEVQAAFAKITMLCDAAELPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAASIL 177
M D + AF +IT + D LP+ + D +K +++K+LKG++ ++I +A +
Sbjct: 1 SMSSSDRAMMNAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLY 60
Query: 178 IGCRRAEVARTFKEIQSLIHVKTKEFGKTLNIMKNILRGKSEDGFLKIDTDNMSGAQNLT 237
I CR+ V RTFKEI ++ + KE G+ + IL+ L D
Sbjct: 61 IACRQEGVPRTFKEICAVSRISKKEIGRCFKL---ILKALETSVDLITTGD--------- 108
Query: 238 YIPRFCSHLGLPMQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAK 297
++ RFCS+L LP QV +A + A+K E+ + G+SPI++A +IY+ T +
Sbjct: 109 FMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKE 168
Query: 298 VGQTLQVTEGTIKSGYKILY 317
+G V + TI+ Y+++Y
Sbjct: 169 IGDIAGVADVTIRQSYRLIY 188
Score = 56.3 bits (134), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/94 (20%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Query: 239 IPRFCSHLGLPMQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAKV 298
I + LP + K+ E K + G++ IA +Y+ +P T ++
Sbjct: 16 ITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEI 75
Query: 299 GQTLQVTEGTIKSGYKILYEHRDKLVDPQLIANG 332
++++ I +K++ + + VD LI G
Sbjct: 76 CAVSRISKKEIGRCFKLILKALETSVD--LITTG 107
>6CNF-R nrPDB
Length = 736
Score = 233 bits (593), Expect = 1e-61, Method: Composition-based stats.
Identities = 52/299 (17%), Positives = 105/299 (35%), Gaps = 46/299 (15%)
Query: 24 CPECKVYPPKIVERFSEG--DVVCALCGLVLSDKLVDTRSEWRTFSNDDHNGDDPSRVGE 81
C C + + S D+VC CG+V D + + + S
Sbjct: 4 CKNC--HGTEFERDLSNANNDLVCKACGVVSEDNPIVSEVTFGETSAGAAVVQ------- 54
Query: 82 ASNPLLDGNNLSTRIGKGETTDMRFTKELNKAQGKNVMDKKDNEVQAAFAKITMLCDAAE 141
+ IG G++ G + ++ ++ + A K+ + A
Sbjct: 55 -----------GSFIGAGQSHAA--------FGGSSALESREATLNNARRKLRAVSYALH 95
Query: 142 LPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAASILIGCRRAEVARTFKEIQSLIHVKTK 201
+P+ + D A + YKL ++G+ ++++A+ + + CR+ + + S + V
Sbjct: 96 IPEYITDAAFQWYKLALANNFVQGRRSQNVIASCLYVACRKEKTHHMLIDFSSRLQVSVY 155
Query: 202 EFGKTL-NIMKNILRGKSEDGFLKIDTDNMSGAQNLTYIPRFCSHLGLP---MQVTTSAE 257
G T ++K K+ + A +I F L L ++V A
Sbjct: 156 SIGATFLKMVK------------KLHITELPLADPSLFIQHFAEKLDLADKKIKVVKDAV 203
Query: 258 YTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAKVGQTLQVTEGTIKSGYKIL 316
A++ + G+ P IA I L + + T ++ V E T++
Sbjct: 204 KLAQRMSKDWMFEGRRPAGIAGACILLACRMNNLRRTHTEIVAVSHVAEETLQQRLNEF 262
Score = 45.1 bits (105), Expect = 5e-05, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 80/220 (36%), Gaps = 18/220 (8%)
Query: 126 VQAAFAKITMLCDAAELPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAASILIGCRRAEV 185
+ A KI ++ DA +L + + +K+ +G+ I A IL+ CR +
Sbjct: 189 LDLADKKIKVVKDAVKLAQRM---SKDW--------MFEGRRPAGIAGACILLACRMNNL 237
Query: 186 ARTFKEIQSLIHVKTKEFGKTLNIMKNILRGKSEDGFLKIDTDNMSGAQNLTYIP----- 240
RT EI ++ HV + + LN KN K + + A+ +++
Sbjct: 238 RRTHTEIVAVSHVAEETLQQRLNEFKNTKAAKLSVQKFRENDVEDGEARPPSFVKNRKKE 297
Query: 241 -RFCSHLGLPMQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAKVG 299
+ L TS E K + ++ G+ ++ V YL + ++
Sbjct: 298 RKIKDSLDKEEMFQTS-EEALNKNPILTQVLGEQELSSKEVLFYLKQFSERRARVVERIK 356
Query: 300 QTLQVTEGTIKSGYKILYEHRDKLVDPQLIANGVVSLDNL 339
T + I + KL + + V +L N+
Sbjct: 357 ATNGIDGENIYHEGSENETRKRKLSEAMPWSGIVPTLQNI 396
Score = 29.7 bits (65), Expect = 1.8, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 4/87 (4%)
Query: 246 LGLPMQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAKVGQTLQVT 305
L +P +T +A K + G+ + +Y+ + LQV+
Sbjct: 94 LHIPEYITDAAFQWYKLALANNFVQGRRSQNVIASCLYVACRKEKTHHMLIDFSSRLQVS 153
Query: 306 EGTIKSGY----KILYEHRDKLVDPQL 328
+I + + K L+ L DP L
Sbjct: 154 VYSIGATFLKMVKKLHITELPLADPSL 180
>6F41-V nrPDB
Length = 596
Score = 229 bits (584), Expect = 1e-60, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 100/279 (35%), Gaps = 42/279 (15%)
Query: 42 DVVCALCGLVLSDKLVDTRSEWRTFSNDDHNGDDPSRVGEASNPLLDGNNLSTRIGKGET 101
D+VC CG+V D + + + S + IG G++
Sbjct: 22 DLVCKACGVVSEDNPIVSEVTFGETSAGAAVVQ------------------GSFIGAGQS 63
Query: 102 TDMRFTKELNKAQGKNVMDKKDNEVQAAFAKITMLCDAAELPKIVKDCAKEAYKLCHDEK 161
G + ++ ++ + A K+ + A +P+ + D A + YKL
Sbjct: 64 HAA--------FGGSSALESREATLNNARRKLRAVSYALHIPEYITDAAFQWYKLALANN 115
Query: 162 TLKGKSMESIMAASILIGCRRAEVARTFKEIQSLIHVKTKEFGKTL-NIMKNILRGKSED 220
++G+ ++++A+ + + CR+ + + S + V G T ++K
Sbjct: 116 FVQGRRSQNVIASCLYVACRKEKTHHMLIDFSSRLQVSVYSIGATFLKMVK--------- 166
Query: 221 GFLKIDTDNMSGAQNLTYIPRFCSHLGLP---MQVTTSAEYTAKKCKEIKEIAGKSPITI 277
K+ + A +I F L L ++V A A++ + G+ P I
Sbjct: 167 ---KLHITELPLADPSLFIQHFAEKLDLADKKIKVVKDAVKLAQRMSKDWMFEGRRPAGI 223
Query: 278 AVVSIYLNILLFQIPITAAKVGQTLQVTEGTIKSGYKIL 316
A I L + + T ++ V E T++
Sbjct: 224 AGACILLACRMNNLRRTHTEIVAVSHVAEETLQQRLNEF 262
Score = 43.6 bits (101), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/190 (19%), Positives = 70/190 (36%), Gaps = 18/190 (9%)
Query: 126 VQAAFAKITMLCDAAELPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAASILIGCRRAEV 185
+ A KI ++ DA +L + + +K+ +G+ I A IL+ CR +
Sbjct: 189 LDLADKKIKVVKDAVKLAQRM---SKDW--------MFEGRRPAGIAGACILLACRMNNL 237
Query: 186 ARTFKEIQSLIHVKTKEFGKTLNIMKNILRGKSEDGFLKIDTDNMSGAQNLTYIP----- 240
RT EI ++ HV + + LN KN K + + A+ +++
Sbjct: 238 RRTHTEIVAVSHVAEETLQQRLNEFKNTKAAKLSVQKFRENDVEDGEARPPSFVKNRKKE 297
Query: 241 -RFCSHLGLPMQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAKVG 299
+ L TS E K + ++ G+ ++ V YL + ++
Sbjct: 298 RKIKDSLDKEEMFQTS-EEALNKNPILTQVLGEQELSSKEVLFYLKQFSERRARVVERIK 356
Query: 300 QTLQVTEGTI 309
T + I
Sbjct: 357 ATNGIDGENI 366
Score = 29.4 bits (64), Expect = 2.3, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 4/87 (4%)
Query: 246 LGLPMQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAKVGQTLQVT 305
L +P +T +A K + G+ + +Y+ + LQV+
Sbjct: 94 LHIPEYITDAAFQWYKLALANNFVQGRRSQNVIASCLYVACRKEKTHHMLIDFSSRLQVS 153
Query: 306 EGTIKSGY----KILYEHRDKLVDPQL 328
+I + + K L+ L DP L
Sbjct: 154 VYSIGATFLKMVKKLHITELPLADPSL 180
>1AIS-B nrPDB
Length = 200
Score = 228 bits (582), Expect = 2e-60, Method: Composition-based stats.
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 10/201 (4%)
Query: 118 VMDKKDNEVQAAFAKITMLCDAAELPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAASIL 177
V D + + A +++ + +LP+ V++ A Y+ + ++G+S+ES+MAA +
Sbjct: 1 VSDAAERNLAFALSELDRITAQLKLPRHVEEEAARLYREAVRKGLIRGRSIESVMAACVY 60
Query: 178 IGCRRAEVARTFKEIQSLIHVKTKEFGKTLNIMKNILRGKSEDGFLKIDTDNMSGAQNLT 237
CR +V RT EI + V KE G++ + L + F+K
Sbjct: 61 AACRLLKVPRTLDEIADIARVDKKEIGRSYRFIARNLNLTPKKLFVK----------PTD 110
Query: 238 YIPRFCSHLGLPMQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAK 297
Y+ +F LGL +V A + + +GKSP + ++Y+ LL T +
Sbjct: 111 YVNKFADELGLSEKVRRRAIEILDEAYKRGLTSGKSPAGLVAAALYIASLLEGEKRTQRE 170
Query: 298 VGQTLQVTEGTIKSGYKILYE 318
V + +VTE T+++ YK L E
Sbjct: 171 VAEVARVTEVTVRNRYKELVE 191
Score = 43.6 bits (101), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 30/85 (35%)
Query: 133 ITMLCDAAELPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAASILIGCRRAEVARTFKEI 192
+ D L + V+ A E + GKS ++AA++ I RT +E+
Sbjct: 112 VNKFADELGLSEKVRRRAIEILDEAYKRGLTSGKSPAGLVAAALYIASLLEGEKRTQREV 171
Query: 193 QSLIHVKTKEFGKTLNIMKNILRGK 217
+ V + L+ K
Sbjct: 172 AEVARVTEVTVRNRYKELVEKLKIK 196
>3K1F-M nrPDB
Length = 197
Score = 137 bits (345), Expect = 7e-33, Method: Composition-based stats.
Identities = 68/68 (100%), Positives = 68/68 (100%)
Query: 1 MMTRESIDKRAGRRGPNLNIVLTCPECKVYPPKIVERFSEGDVVCALCGLVLSDKLVDTR 60
MMTRESIDKRAGRRGPNLNIVLTCPECKVYPPKIVERFSEGDVVCALCGLVLSDKLVDTR
Sbjct: 1 MMTRESIDKRAGRRGPNLNIVLTCPECKVYPPKIVERFSEGDVVCALCGLVLSDKLVDTR 60
Query: 61 SEWRTFSN 68
SEWRTFSN
Sbjct: 61 SEWRTFSN 68
>1RLY-A nrPDB
Length = 60
Score = 92.5 bits (228), Expect = 3e-19, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 22 LTCPECKVYPPKI-VERFSEGDVVCALCGLVLSDKLVDTRSEWRTFSNDDH 71
+TCP +P I VE + GD++C CGLV+ D+++D SEWRTFSND
Sbjct: 13 VTCPN---HPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA 60
>4ROE-A nrPDB
Length = 360
Score = 65.9 bits (159), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/173 (14%), Positives = 61/173 (35%), Gaps = 9/173 (5%)
Query: 120 DKKDNEVQAAFAKITMLCDAAELPKIVKDCAKEAYKLCHDEKTLKGKSMES---IMAASI 176
++ Q ++ LC +LP +D A Y+ + ++ ++ ++ +
Sbjct: 4 EQVSRSQQRGLRRVRDLCRVLQLPPTFEDTAVAYYQQAYRHSGIRAARLQKKEVLVGCCV 63
Query: 177 LIGCRRAEVARTFKEIQSLIHVKTKEFGKTLNIMKNILRGKSEDG----FLKIDTDNMSG 232
LI CR+ T I +L++ F T + +L +K +
Sbjct: 64 LITCRQHNWPLTMGAICTLLYADLDVFSSTYMQIVKLLGLDVPSLCLAELVKTYCSSFKL 123
Query: 233 AQNLTYIPRFCSHLGLPMQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLN 285
Q +P ++ ++ + + E + G+ P+ + + +L
Sbjct: 124 FQASPSVP--AKYVEDKEKMLSRTMQLVELANETWLVTGRHPLPVITAATFLA 174
>1ZP2-A nrPDB
Length = 235
Score = 35.9 bits (81), Expect = 0.025, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Query: 131 AKITMLCDAAELPKIVKDCAKEAYKL-CHDEKTLKGKSMESIMAASILIGCRRAEVARTF 189
+ D L + V A + + KG S+E+++A I + C+ E
Sbjct: 33 KVVQTFGDRLRLRQRVLATAIVLLRRYMLKKNEEKGFSLEALVATCIYLSCKVEECPVHI 92
Query: 190 KEIQS 194
+ I +
Sbjct: 93 RTICN 97
>6E8E-B nrPDB
Length = 517
Score = 31.7 bits (70), Expect = 0.47, Method: Composition-based stats.
Identities = 30/213 (14%), Positives = 77/213 (36%), Gaps = 22/213 (10%)
Query: 138 DAAELPKIVK---DCAKEAYKLCHDEKTLKGKSMESIMAASILIGCRRAEV------ART 188
LPK + + K + S E + + + ++
Sbjct: 282 YRRVLPKNPDKHLEAGCDLLKQAFARAAI--LSNEKFRGVRLYVSENQLKITANNPEQEE 339
Query: 189 FKEIQSLIHVKTK-EFGKTLNIMKNILRGKSEDGFLKIDTDNMSGAQNLTYIPRFCSHLG 247
+EI + + + E G ++ + ++L + + TD++S Q + +++
Sbjct: 340 AEEILDVTYSGAEMEIGFNVSYVLDVLNALKCENVRMMLTDSVSSVQIEDAASQSAAYVV 399
Query: 248 LPMQVTTSAEYTAKKCKEIKEIAGKSPITIAVVSIYLNILLFQIPITAAKVGQTL----- 302
+PM++ S ++ + G++P+ + I L + + +A + Q+
Sbjct: 400 MPMRLVDSGASGGSWLRQAQLTPGEAPVCAQPLLIPLRLKVSAEEKSALEKAQSALAELG 459
Query: 303 -----QVTEGTIKSGYKILYEHRDKLVDPQLIA 330
TI++ L + +++ P+LI
Sbjct: 460 IDFQSDAQHVTIRAVPLPLRQQNLQILIPELIG 492
>4NST-B nrPDB
Length = 268
Score = 29.7 bits (65), Expect = 1.7, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 36/122 (29%), Gaps = 7/122 (5%)
Query: 173 AASILIGCRRAEVARTFKEI--QSLIHVKTKEFGKTLNIMKNILRGKSEDGFLKIDTDNM 230
A + + + E + K+I + + +FG+ + K + I D +
Sbjct: 98 ACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFD-L 156
Query: 231 SGAQNLTYIPRFCSHLGLPMQVTTSAEYTAKKCKEIKEIAGKS----PITIAVVSIYLNI 286
++ ++ L A S P IAV +YL
Sbjct: 157 QVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAG 216
Query: 287 LL 288
L
Sbjct: 217 RL 218
>5KYJ-A nrPDB
Length = 287
Score = 29.7 bits (65), Expect = 1.8, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Query: 66 FSNDDHNGDDPSRVGEASNPLLDGNNLSTRIGKGETTDMRFTKELNKAQGKNVMDKKDNE 125
FS D N +P RV P ++ TRI K +RF + L K + +E
Sbjct: 186 FSADRPNVQEPGRVEALQQPYVEALLSYTRI-KRPQDQLRFPRMLMKLVSLRTLSSVHSE 244
Query: 126 VQAAFA 131
A
Sbjct: 245 QVFALR 250
>4NQA-B nrPDB
Length = 391
Score = 29.7 bits (65), Expect = 1.8, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Query: 66 FSNDDHNGDDPSRVGEASNPLLDGNNLSTRIGKGETTDMRFTKELNKAQGKNVMDKKDNE 125
FS D N +P RV P ++ TRI K +RF + L K + +E
Sbjct: 309 FSADRPNVQEPGRVEALQQPYVEALLSYTRI-KRPQDQLRFPRMLMKLVSLRTLSSVHSE 367
Query: 126 VQAAFA 131
A
Sbjct: 368 QVFALR 373
>2F00-A nrPDB
Length = 491
Score = 29.7 bits (65), Expect = 2.0, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 58 DTRSEWRTFSN----DDHNGDDPSRVGEASNPLLDGNNLSTRIGKGETT 102
D+RS RT D DP+RV E P+L GN+L G G
Sbjct: 421 DSRSLCRTIRGRGKIDPILVPDPARVAEMLAPVLTGNDLILVQGAGNIG 469
>6N9E-15 nrPDB
Length = 60
Score = 29.7 bits (65), Expect = 2.0, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 8/39 (20%)
Query: 21 VLTCPECKVYPPKIVERFSEGDVVCALCGLVLSDKLVDT 59
++ CPECK P VC CG K+++
Sbjct: 30 LVPCPECKAMKPP--------HTVCPECGYYAGRKVLEV 60
>3TTD-A nrPDB
Length = 658
Score = 29.4 bits (64), Expect = 2.4, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 24 CPEC-KVYPPKIVERFSEGDVVCALCG 49
CP C K Y + RF V C CG
Sbjct: 70 CPACDKEYRDPLDRRFHAQPVACPECG 96
>5G4J-A nrPDB
Length = 446
Score = 28.6 bits (62), Expect = 3.9, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 6/77 (7%)
Query: 96 IGKGETTDMRFTKEL------NKAQGKNVMDKKDNEVQAAFAKITMLCDAAELPKIVKDC 149
IG TT + N G V V + ++ A +L K ++
Sbjct: 289 IGAVVTTAELLDEFGRHNMFFNTFAGNPVSSAAGLAVLRYMDQEDLMAKADQLGKYIRKR 348
Query: 150 AKEAYKLCHDEKTLKGK 166
+ + + +++G+
Sbjct: 349 LENIAQRSGNVGSVRGR 365
>4R12-A nrPDB
Length = 593
Score = 28.2 bits (61), Expect = 5.1, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 64 RTFSNDDHNGDDPSRVGEASNPLLDGNNLSTRIGKGETTDMRFTKELNKA 113
+T+++D DP R A ++ +ST I + + K L K
Sbjct: 291 KTYNSDKSKCIDPPRADLAFQTQINFTKISTIIELNQIGRAQLDKNLGKY 340
>6EL3-D nrPDB
Length = 381
Score = 28.2 bits (61), Expect = 6.0, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 30/92 (32%), Gaps = 14/92 (15%)
Query: 99 GETTDMRFTKELNKAQGKNVMDKKDNEVQAAFAKITMLCDAAELPKIVKDCAKEAYKLCH 158
G D FT+++ + Q +N +++ + KI + + P ++ Y L
Sbjct: 151 GPRHDPPFTEDMPRLQIQNFYYTQEDILFEEIKKIETVTWSIHRPNMIF--GFSPYSL-- 206
Query: 159 DEKTLKGKSMESIMAASILIG-CRRAEVARTF 189
M + + C+ F
Sbjct: 207 ---------MNIVGTLCVYAAICKHEGSPLLF 229
>1KXU-A nrPDB
Length = 333
Score = 27.4 bits (59), Expect = 9.7, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 16/43 (37%)
Query: 142 LPKIVKDCAKEAYKLCHDEKTLKGKSMESIMAASILIGCRRAE 184
+P+ V A +K + ++ IM + C+ E
Sbjct: 85 MPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDE 127
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.311 0.126 0.321
Lambda K H
0.267 0.0386 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,357,857
Number of Sequences: 36641
Number of extensions: 412879
Number of successful extensions: 1191
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1124
Number of HSP's gapped (non-prelim): 49
length of query: 345
length of database: 10,336,785
effective HSP length: 98
effective length of query: 247
effective length of database: 6,745,967
effective search space: 1666253849
effective search space used: 1666253849
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 59 (27.4 bits)