BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P27882 (189 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4E0I-A nrPDB 392 e-110 3W4Y-A nrPDB 252 6e-68 4E0H-A nrPDB 224 1e-59 3O55-A nrPDB 124 4e-29 3R7C-A nrPDB 121 2e-28 1OQC-A nrPDB 120 3e-28 2HJ3-A nrPDB 104 2e-23 1JRA-A nrPDB 80 6e-16 3TD7-A nrPDB 56 1e-08 3GWN-A nrPDB 55 2e-08 3GWL-A nrPDB 40 6e-04 4P2L-A nrPDB 39 0.001 3T59-A nrPDB 37 0.007 3LLI-A nrPDB 35 0.016 5O0Y-A nrPDB 28 2.0 6A5Q-B nrPDB 28 2.8 4KRG-A nrPDB 26 9.8 >4E0I-A nrPDB Length = 189 Score = 392 bits (1008), Expect = e-110, Method: Compositional matrix adjust. Identities = 187/189 (98%), Positives = 187/189 (98%) Query: 1 MKAIDKMTDNPPQEGLSGRKIIYDEDGKPCRSCNTLLDFQYVTGKISNGLKNLSSNGKLA 60 MKAIDKMTDNPPQEGLSGRKIIYDEDGKP RSCNTLLDFQYVTGKISNGLKNLSSNGKLA Sbjct: 1 MKAIDKMTDNPPQEGLSGRKIIYDEDGKPSRSCNTLLDFQYVTGKISNGLKNLSSNGKLA 60 Query: 61 GTGALTGEASELMPGSRTYRKVDPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQF 120 GTGALTGEASELMPGSRTYRKVDPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQF Sbjct: 61 GTGALTGEASELMPGSRTYRKVDPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQF 120 Query: 121 LNIFSHIYPCNWCAKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWE 180 LNIFSHIYPCNW AKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWE Sbjct: 121 LNIFSHIYPCNWSAKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWE 180 Query: 181 KRWKDGWDE 189 KRWKDGWDE Sbjct: 181 KRWKDGWDE 189 >3W4Y-A nrPDB Length = 120 Score = 252 bits (644), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 117/117 (100%), Positives = 117/117 (100%) Query: 73 MPGSRTYRKVDPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNW 132 MPGSRTYRKVDPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNW Sbjct: 4 MPGSRTYRKVDPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNW 63 Query: 133 CAKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRWKDGWDE 189 CAKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRWKDGWDE Sbjct: 64 CAKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRWKDGWDE 120 >4E0H-A nrPDB Length = 106 Score = 224 bits (572), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 104/104 (100%), Positives = 104/104 (100%) Query: 86 DVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIRENA 145 DVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIRENA Sbjct: 3 DVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIRENA 62 Query: 146 PQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRWKDGWDE 189 PQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRWKDGWDE Sbjct: 63 PQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRWKDGWDE 106 >3O55-A nrPDB Length = 125 Score = 124 bits (310), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 52/109 (47%), Positives = 75/109 (68%) Query: 79 YRKVDPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFE 138 +R+ PPD E+LGR SW +LH++AA YP PT +Q+ +M QF+++FS YPC CA+D Sbjct: 11 FREDCPPDREELGRHSWAVLHTLAAYYPDLPTPEQQQDMAQFIHLFSKFYPCEECAEDLR 70 Query: 139 KYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRWKDGW 187 K + N P +R +W+C HN+VN+KL KP FDC+ ++RW+DGW Sbjct: 71 KRLARNHPDTRTRAAFTQWLCHLHNEVNRKLGKPDFDCSKVDERWRDGW 119 >3R7C-A nrPDB Length = 139 Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 51/109 (46%), Positives = 74/109 (67%) Query: 79 YRKVDPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFE 138 +R+ P D E+LGR++W LH++AA YP PT +Q+ +M QF++IFS YPC CA+D Sbjct: 25 FREDCPQDREELGRNTWAFLHTLAAYYPDMPTPEQQQDMAQFIHIFSKFYPCEECAEDIR 84 Query: 139 KYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRWKDGW 187 K I + P +R +W+C HN+VN+KL KP FDC+ ++RW+DGW Sbjct: 85 KRIDRSQPDTSTRVSFSQWLCRLHNEVNRKLGKPDFDCSRVDERWRDGW 133 >1OQC-A nrPDB Length = 125 Score = 120 bits (301), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 51/109 (46%), Positives = 74/109 (67%) Query: 79 YRKVDPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFE 138 +R+ P D E+LGR++W LH++AA YP PT +Q+ +M QF++IFS YPC CA+D Sbjct: 11 FREDCPQDREELGRNTWAFLHTLAAYYPDMPTPEQQQDMAQFIHIFSKFYPCEECAEDIR 70 Query: 139 KYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRWKDGW 187 K I + P +R +W+C HN+VN+KL KP FDC+ ++RW+DGW Sbjct: 71 KRIDRSQPDTSTRVSFSQWLCRLHNEVNRKLGKPDFDCSRVDERWRDGW 119 >2HJ3-A nrPDB Length = 125 Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 45/100 (45%), Positives = 63/100 (63%) Query: 84 PPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIRE 143 P E LGR++WT LH++AA YP +PT QQK ++K+ + I S +YPC CA F++ +R Sbjct: 7 PVTKEDLGRATWTFLHTLAAQYPEKPTRQQKKDVKELMTILSRMYPCRECADHFKEILRS 66 Query: 144 NAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRW 183 N Q S+EE +W+C HN VN+ L K F C + RW Sbjct: 67 NPAQAGSQEEFSQWLCHVHNTVNRSLGKLVFPCERVDARW 106 >1JRA-A nrPDB Length = 117 Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 54/89 (60%) Query: 88 EQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIRENAPQ 147 +++GR+SW H++ A +P +PT +++ ++ F+ +++ +YPC C+ F K I + Q Sbjct: 9 KEVGRASWKYFHTLLARFPDEPTPEEREKLHTFIGLYAELYPCGECSYHFVKLIEKYPVQ 68 Query: 148 VESREELGRWMCEAHNKVNKKLRKPKFDC 176 SR W C HNKVN+ L+K +DC Sbjct: 69 TSSRTAAAMWGCHIHNKVNEYLKKDIYDC 97 >3TD7-A nrPDB Length = 295 Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 12/111 (10%) Query: 71 ELMPGSRTYRKVDPPDVEQ-------LGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNI 123 E+ P S + K+D + + G + WT H+V YP PT K K + Sbjct: 17 EIAPNSESTAKMDHSNYQHNGLITKIWGTAGWTFNHAVTFGYPLNPTSDDKRRYKNYFIS 76 Query: 124 FSHIYPCNWCAKDFEKYIRENAPQ-----VESREELGRWMCEAHNKVNKKL 169 + PC C + ++K+I + +R L +W + HN VN KL Sbjct: 77 LGDVLPCRLCRESYKKFITTGKTALTNEVLRNRHTLTKWFYDVHNAVNNKL 127 >3GWN-A nrPDB Length = 114 Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 5/84 (5%) Query: 91 GRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIRENAPQ--- 147 G + WT H+V YP PT K K + + PC C + ++K+I Sbjct: 10 GTAGWTFNHAVTFGYPLNPTSDDKRRYKNYFISLGDVLPCRLCRESYKKFITTGKTALTN 69 Query: 148 --VESREELGRWMCEAHNKVNKKL 169 + +R L +W + HN VN KL Sbjct: 70 EVLRNRHTLTKWFYDVHNAVNNKL 93 >3GWL-A nrPDB Length = 106 Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 35/81 (43%) Query: 91 GRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIRENAPQVES 150 G W LH A + P+ ++K E Q++ F PC C Y+ +N + + Sbjct: 8 GPKYWRSLHLYAIFFSDAPSWKEKYEAIQWILNFIESLPCTRCQHHAFSYLTKNPLTLNN 67 Query: 151 REELGRWMCEAHNKVNKKLRK 171 E+ W HN VN +L K Sbjct: 68 SEDFQYWTFAFHNNVNNRLNK 88 >4P2L-A nrPDB Length = 506 Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 12/86 (13%) Query: 93 SSWTLLHSVAA-------SYPAQPTDQQK--GEMKQFLNIFSHIYPCNWCAKDFEKYIRE 143 S W L H + ++P +P D Q+ M+ ++ F + C CA FE+ Sbjct: 366 SLWVLFHFLTVQAHRYSEAHPQEPADGQEVLQAMRSYVQSF---FGCRDCANHFEQMAAA 422 Query: 144 NAPQVESREELGRWMCEAHNKVNKKL 169 + QV+S W+ +HN+VN +L Sbjct: 423 SMHQVKSPSNAVLWLWTSHNRVNARL 448 >3T59-A nrPDB Length = 519 Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 12/86 (13%) Query: 93 SSWTLLHSVAA-------SYPAQPTDQQK--GEMKQFLNIFSHIYPCNWCAKDFEKYIRE 143 S W L H + ++P +P D Q+ M+ ++ F + C A FE+ Sbjct: 378 SLWVLFHFLTVQANRYSEAHPQEPADGQEVLQAMRSYVQFF---FGCRDSADHFEQMAAA 434 Query: 144 NAPQVESREELGRWMCEAHNKVNKKL 169 + QV S W+ +HN+VN +L Sbjct: 435 SMHQVRSPSNAILWLWTSHNRVNARL 460 >3LLI-A nrPDB Length = 261 Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 7/98 (7%) Query: 93 SSWTLLHSVAASYPAQPTD--QQKGEMKQFL----NIFSHIYPCNWCAKDFEKYIRENAP 146 S W L H + Q D Q+ + K+ L + + C CA FE+ + Sbjct: 121 SLWVLFHFLTVQAARQNVDHSQEAAKAKEVLPAIRGYVHYFFGCRDCASHFEQMAAASMH 180 Query: 147 QVESREELGRWMCEAHNKVNKKLR-KPKFDCNFWEKRW 183 +V S W+ +HN+VN +L P D F + +W Sbjct: 181 RVGSPNAAVLWLWSSHNRVNARLAGAPSEDPQFPKVQW 218 >5O0Y-A nrPDB Length = 579 Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Query: 64 ALTGEASELMPGSRTYRKVDPPDVEQLGRSSWTLLH---SVAASYPA 107 +T EA + YRK D DV+QL + L H SV+ S PA Sbjct: 533 VVTPEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHIRKSVSTSSPA 579 >6A5Q-B nrPDB Length = 250 Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 4/94 (4%) Query: 60 AGTGALTGEASELMPGSRTYRKVDPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQ 119 A A+T + EL R V +V RSSW ++ S+ QQ G K+ Sbjct: 30 AAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMG--KE 87 Query: 120 FLN-IFSHIYP-CNWCAKDFEKYIRENAPQVESR 151 + I + + CN + +KY+ NA Q ES+ Sbjct: 88 YREKIEAELQDICNDVLELLDKYLIPNATQPESK 121 >4KRG-A nrPDB Length = 466 Score = 26.2 bits (56), Expect = 9.8, Method: Compositional matrix adjust. Identities = 24/102 (23%), Positives = 36/102 (35%), Gaps = 17/102 (16%) Query: 93 SSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPC--------------NWCAKDFE 138 ++W +H + PA ++ + LN+FS I+P +W K F Sbjct: 227 NNWRQVHWLTKKVPA--VGDEETSVDDLLNLFSQIWPAEQKTWDEKLDNEKYSWTDKIFS 284 Query: 139 KYIR-ENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFW 179 I E P+ + VN L KF CN W Sbjct: 285 NAIDDEVVPKNSTAYVFTPRQRSPFLHVNSHLLAEKFTCNVW 326 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4E0I-A nrPDB 331 1e-91 3W4Y-A nrPDB 190 4e-49 3O55-A nrPDB 176 4e-45 3R7C-A nrPDB 176 5e-45 1OQC-A nrPDB 174 1e-44 4E0H-A nrPDB 169 7e-43 2HJ3-A nrPDB 151 2e-37 1JRA-A nrPDB 134 2e-32 3TD7-A nrPDB 131 2e-31 3GWL-A nrPDB 113 4e-26 3GWN-A nrPDB 110 5e-25 4P2L-A nrPDB 90 5e-19 Sequences not found previously or not previously below threshold: 3T59-A nrPDB 85 2e-17 3LLI-A nrPDB 72 2e-13 3QD9-A nrPDB 43 1e-04 5XB6-A nrPDB 33 0.097 4RKM-A nrPDB 32 0.19 6FDU-A nrPDB 31 0.37 5JM7-A nrPDB 31 0.38 6CF9-A nrPDB 30 0.52 5XWI-A nrPDB 28 1.7 6BUX-A nrPDB 27 6.6 5YJ7-A nrPDB 27 7.4 5W0U-B nrPDB 26 9.4 5JJ4-C nrPDB 26 9.4 >4E0I-A nrPDB Length = 189 Score = 331 bits (848), Expect = 1e-91, Method: Composition-based stats. Identities = 187/189 (98%), Positives = 187/189 (98%) Query: 1 MKAIDKMTDNPPQEGLSGRKIIYDEDGKPCRSCNTLLDFQYVTGKISNGLKNLSSNGKLA 60 MKAIDKMTDNPPQEGLSGRKIIYDEDGKP RSCNTLLDFQYVTGKISNGLKNLSSNGKLA Sbjct: 1 MKAIDKMTDNPPQEGLSGRKIIYDEDGKPSRSCNTLLDFQYVTGKISNGLKNLSSNGKLA 60 Query: 61 GTGALTGEASELMPGSRTYRKVDPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQF 120 GTGALTGEASELMPGSRTYRKVDPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQF Sbjct: 61 GTGALTGEASELMPGSRTYRKVDPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQF 120 Query: 121 LNIFSHIYPCNWCAKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWE 180 LNIFSHIYPCNW AKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWE Sbjct: 121 LNIFSHIYPCNWSAKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWE 180 Query: 181 KRWKDGWDE 189 KRWKDGWDE Sbjct: 181 KRWKDGWDE 189 >3W4Y-A nrPDB Length = 120 Score = 190 bits (482), Expect = 4e-49, Method: Composition-based stats. Identities = 117/117 (100%), Positives = 117/117 (100%) Query: 73 MPGSRTYRKVDPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNW 132 MPGSRTYRKVDPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNW Sbjct: 4 MPGSRTYRKVDPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNW 63 Query: 133 CAKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRWKDGWDE 189 CAKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRWKDGWDE Sbjct: 64 CAKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRWKDGWDE 120 >3O55-A nrPDB Length = 125 Score = 176 bits (447), Expect = 4e-45, Method: Composition-based stats. Identities = 52/111 (46%), Positives = 76/111 (68%) Query: 79 YRKVDPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFE 138 +R+ PPD E+LGR SW +LH++AA YP PT +Q+ +M QF+++FS YPC CA+D Sbjct: 11 FREDCPPDREELGRHSWAVLHTLAAYYPDLPTPEQQQDMAQFIHLFSKFYPCEECAEDLR 70 Query: 139 KYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRWKDGWDE 189 K + N P +R +W+C HN+VN+KL KP FDC+ ++RW+DGW + Sbjct: 71 KRLARNHPDTRTRAAFTQWLCHLHNEVNRKLGKPDFDCSKVDERWRDGWKD 121 >3R7C-A nrPDB Length = 139 Score = 176 bits (446), Expect = 5e-45, Method: Composition-based stats. Identities = 51/111 (45%), Positives = 75/111 (67%) Query: 79 YRKVDPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFE 138 +R+ P D E+LGR++W LH++AA YP PT +Q+ +M QF++IFS YPC CA+D Sbjct: 25 FREDCPQDREELGRNTWAFLHTLAAYYPDMPTPEQQQDMAQFIHIFSKFYPCEECAEDIR 84 Query: 139 KYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRWKDGWDE 189 K I + P +R +W+C HN+VN+KL KP FDC+ ++RW+DGW + Sbjct: 85 KRIDRSQPDTSTRVSFSQWLCRLHNEVNRKLGKPDFDCSRVDERWRDGWKD 135 >1OQC-A nrPDB Length = 125 Score = 174 bits (442), Expect = 1e-44, Method: Composition-based stats. Identities = 51/111 (45%), Positives = 75/111 (67%) Query: 79 YRKVDPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFE 138 +R+ P D E+LGR++W LH++AA YP PT +Q+ +M QF++IFS YPC CA+D Sbjct: 11 FREDCPQDREELGRNTWAFLHTLAAYYPDMPTPEQQQDMAQFIHIFSKFYPCEECAEDIR 70 Query: 139 KYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRWKDGWDE 189 K I + P +R +W+C HN+VN+KL KP FDC+ ++RW+DGW + Sbjct: 71 KRIDRSQPDTSTRVSFSQWLCRLHNEVNRKLGKPDFDCSRVDERWRDGWKD 121 >4E0H-A nrPDB Length = 106 Score = 169 bits (428), Expect = 7e-43, Method: Composition-based stats. Identities = 104/106 (98%), Positives = 104/106 (98%) Query: 84 PPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIRE 143 DVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIRE Sbjct: 1 HMDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIRE 60 Query: 144 NAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRWKDGWDE 189 NAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRWKDGWDE Sbjct: 61 NAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRWKDGWDE 106 >2HJ3-A nrPDB Length = 125 Score = 151 bits (382), Expect = 2e-37, Method: Composition-based stats. Identities = 45/100 (45%), Positives = 63/100 (63%) Query: 84 PPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIRE 143 P E LGR++WT LH++AA YP +PT QQK ++K+ + I S +YPC CA F++ +R Sbjct: 7 PVTKEDLGRATWTFLHTLAAQYPEKPTRQQKKDVKELMTILSRMYPCRECADHFKEILRS 66 Query: 144 NAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRW 183 N Q S+EE +W+C HN VN+ L K F C + RW Sbjct: 67 NPAQAGSQEEFSQWLCHVHNTVNRSLGKLVFPCERVDARW 106 >1JRA-A nrPDB Length = 117 Score = 134 bits (338), Expect = 2e-32, Method: Composition-based stats. Identities = 33/104 (31%), Positives = 58/104 (55%) Query: 83 DPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIR 142 D +++GR+SW H++ A +P +PT +++ ++ F+ +++ +YPC C+ F K I Sbjct: 4 DDKVKKEVGRASWKYFHTLLARFPDEPTPEEREKLHTFIGLYAELYPCGECSYHFVKLIE 63 Query: 143 ENAPQVESREELGRWMCEAHNKVNKKLRKPKFDCNFWEKRWKDG 186 + Q SR W C HNKVN+ L+K +DC + + G Sbjct: 64 KYPVQTSSRTAAAMWGCHIHNKVNEYLKKDIYDCATILEDYDCG 107 >3TD7-A nrPDB Length = 295 Score = 131 bits (330), Expect = 2e-31, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 12/111 (10%) Query: 71 ELMPGSRTYRKVDPPDVEQ-------LGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNI 123 E+ P S + K+D + + G + WT H+V YP PT K K + Sbjct: 17 EIAPNSESTAKMDHSNYQHNGLITKIWGTAGWTFNHAVTFGYPLNPTSDDKRRYKNYFIS 76 Query: 124 FSHIYPCNWCAKDFEKYIRENAPQ-----VESREELGRWMCEAHNKVNKKL 169 + PC C + ++K+I + +R L +W + HN VN KL Sbjct: 77 LGDVLPCRLCRESYKKFITTGKTALTNEVLRNRHTLTKWFYDVHNAVNNKL 127 >3GWL-A nrPDB Length = 106 Score = 113 bits (284), Expect = 4e-26, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 35/85 (41%) Query: 89 QLGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIRENAPQV 148 G W LH A + P+ ++K E Q++ F PC C Y+ +N + Sbjct: 6 HWGPKYWRSLHLYAIFFSDAPSWKEKYEAIQWILNFIESLPCTRCQHHAFSYLTKNPLTL 65 Query: 149 ESREELGRWMCEAHNKVNKKLRKPK 173 + E+ W HN VN +L K Sbjct: 66 NNSEDFQYWTFAFHNNVNNRLNKKI 90 >3GWN-A nrPDB Length = 114 Score = 110 bits (274), Expect = 5e-25, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 5/85 (5%) Query: 90 LGRSSWTLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIRENAPQ-- 147 G + WT H+V YP PT K K + + PC C + ++K+I Sbjct: 9 WGTAGWTFNHAVTFGYPLNPTSDDKRRYKNYFISLGDVLPCRLCRESYKKFITTGKTALT 68 Query: 148 ---VESREELGRWMCEAHNKVNKKL 169 + +R L +W + HN VN KL Sbjct: 69 NEVLRNRHTLTKWFYDVHNAVNNKL 93 >4P2L-A nrPDB Length = 506 Score = 90.1 bits (222), Expect = 5e-19, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 17/104 (16%) Query: 93 SSWTLLHSVAAS-------YPAQPTDQQK--GEMKQFLNIFSHIYPCNWCAKDFEKYIRE 143 S W L H + +P +P D Q+ M+ ++ F + C CA FE+ Sbjct: 366 SLWVLFHFLTVQAHRYSEAHPQEPADGQEVLQAMRSYVQSF---FGCRDCANHFEQMAAA 422 Query: 144 NAPQVESREELGRWMCEAHNKVNKKLR-----KPKFDCNFWEKR 182 + QV+S W+ +HN+VN +L P+F W R Sbjct: 423 SMHQVKSPSNAVLWLWTSHNRVNARLSGALSEDPQFPKVQWPPR 466 >3T59-A nrPDB Length = 519 Score = 84.7 bits (208), Expect = 2e-17, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 17/104 (16%) Query: 93 SSWTLLHSVAAS-------YPAQPTDQQK--GEMKQFLNIFSHIYPCNWCAKDFEKYIRE 143 S W L H + +P +P D Q+ M+ ++ F + C A FE+ Sbjct: 378 SLWVLFHFLTVQANRYSEAHPQEPADGQEVLQAMRSYVQFF---FGCRDSADHFEQMAAA 434 Query: 144 NAPQVESREELGRWMCEAHNKVNKKLR-----KPKFDCNFWEKR 182 + QV S W+ +HN+VN +L P F W R Sbjct: 435 SMHQVRSPSNAILWLWTSHNRVNARLSGALSEDPHFPKVQWPPR 478 >3LLI-A nrPDB Length = 261 Score = 71.6 bits (174), Expect = 2e-13, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 13/101 (12%) Query: 93 SSWTLLHSVAASYPAQPTDQQKGEMKQ---------FLNIFSHIYPCNWCAKDFEKYIRE 143 S W L H + Q D + K +++ F + C CA FE+ Sbjct: 121 SLWVLFHFLTVQAARQNVDHSQEAAKAKEVLPAIRGYVHYF---FGCRDCASHFEQMAAA 177 Query: 144 NAPQVESREELGRWMCEAHNKVNKKL-RKPKFDCNFWEKRW 183 + +V S W+ +HN+VN +L P D F + +W Sbjct: 178 SMHRVGSPNAAVLWLWSSHNRVNARLAGAPSEDPQFPKVQW 218 >3QD9-A nrPDB Length = 470 Score = 42.7 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 13/76 (17%) Query: 95 WTLLHSVAASYPAQPTDQQKGEMKQFLNIFSH-IYPCNWCAKDFEKYIRENAPQVESREE 153 W LLH++ + PA + + + + + C F ++ E+ Sbjct: 305 WLLLHALTVNTPAD------RNVLEVIQNYIRYFFSCKESRDHFIQF------NFSPNED 352 Query: 154 LGRWMCEAHNKVNKKL 169 + AHN VN +L Sbjct: 353 PVLQLWRAHNNVNARL 368 >5XB6-A nrPDB Length = 306 Score = 32.7 bits (73), Expect = 0.097, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 17/106 (16%) Query: 60 AGTGALTGEASE----LMPGSRTYRKVDPPDVEQLGRSSWTLLHSVAASYPAQPTDQQKG 115 AG+ A T + S +MP + ++ D P+ E+L R +W H+ A YP P Sbjct: 167 AGSNARTSDISSGEYAIMPLA-PMKESDAPN-EEL-RQAWEYYHTPRAQYPTAPGYATLR 223 Query: 116 EMKQFLNIFSHIYPCNWCAKDFEKYIRENAPQ-VESREELGRWMCE 160 + Q + + A + Q V + +WM + Sbjct: 224 SLNQII---------TYDAYHMAEVYLTQPTQIVAGSQAGSKWMSD 260 >4RKM-A nrPDB Length = 732 Score = 31.9 bits (71), Expect = 0.19, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 18/57 (31%), Gaps = 6/57 (10%) Query: 119 QFLNIFSHIYPCNWCAKDFEKYIRENAPQVESREELGRWMCEAHNKVNKKLRKPKFD 175 Q+ N F C C + SR H +VN KL P FD Sbjct: 144 QYPNKFIGPEKCGECHP------AQYETWSRSRHATTIRFPGEHPEVNNKLNDPVFD 194 >6FDU-A nrPDB Length = 266 Score = 30.8 bits (68), Expect = 0.37, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 3/68 (4%) Query: 108 QPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIRENAPQVESREELGRWMCEAHNKVNK 167 P + K E++ F +YP K K + Q S G W C+ ++ Sbjct: 164 MPPENMKKELQSFAQQLDQVYPAYDSKKFSVKIAAKEVIQRGSGSSCGAWCCQF---LHW 220 Query: 168 KLRKPKFD 175 L+ P D Sbjct: 221 YLKDPLTD 228 >5JM7-A nrPDB Length = 576 Score = 30.8 bits (68), Expect = 0.38, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 31/84 (36%), Gaps = 21/84 (25%) Query: 100 SVAASYPAQPTDQ-----QKGEMKQFLNIFSHIYPCNWCA----------------KDFE 138 ++ + P + + E +++L F+ +P W A + Sbjct: 144 ALLVGHAFHPAPKSHEPFNQQEAERYLPDFAPHFPLRWFAVNKTQIAGESLHLNLQQRLT 203 Query: 139 KYIRENAPQVESREELGRWMCEAH 162 ++ ENAPQ+ + +W+ H Sbjct: 204 RFAAENAPQLLNELSDNQWLFPLH 227 >6CF9-A nrPDB Length = 524 Score = 30.4 bits (67), Expect = 0.52, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 23/69 (33%), Gaps = 4/69 (5%) Query: 96 TLLHSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIRENAPQVESREELG 155 HS+ P + + +L + + Y A DF K ++ +++ Sbjct: 186 KFRHSMLEINPENVS----EDSAFYLGVNALTYDKTELAYDFFKKAAQSFKSQSNKDNAI 241 Query: 156 RWMCEAHNK 164 WM N Sbjct: 242 FWMWLIKNN 250 >5XWI-A nrPDB Length = 567 Score = 28.5 bits (62), Expect = 1.7, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Query: 40 QYVTGKISNGLKNLSSNGKLAGTGALTGEASELMPGSRTYRKVDPPDVEQLGRSSW 95 QY TG GLK L+S G + G + A+E PG T P + ++W Sbjct: 61 QYYTG----GLKRLTSEGAVFPRGYQSHAATETCPGHSTILTGSRPSRTGIIANNW 112 >6BUX-A nrPDB Length = 199 Score = 26.6 bits (57), Expect = 6.6, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 19/48 (39%) Query: 99 HSVAASYPAQPTDQQKGEMKQFLNIFSHIYPCNWCAKDFEKYIRENAP 146 H+ P + + + F+ PC CA++ K+I +N Sbjct: 72 HAALCFLDVIPFWKLDLDQDYRVTCFTSWSPCFSCAQEMAKFISKNKH 119 >5YJ7-A nrPDB Length = 518 Score = 26.6 bits (57), Expect = 7.4, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 21/41 (51%) Query: 41 YVTGKISNGLKNLSSNGKLAGTGALTGEASELMPGSRTYRK 81 Y G + GLKN++ N +AG L G A+ + Y++ Sbjct: 200 YGQGGHAPGLKNMAENPYMAGHNQLLGHAAAVKVYREKYQE 240 >5W0U-B nrPDB Length = 549 Score = 26.2 bits (56), Expect = 9.4, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 14/37 (37%) Query: 124 FSHIYPCNWCAKDFEKYIRENAPQVESREELGRWMCE 160 F+ PC CA+ ++R N + CE Sbjct: 449 FTSWSPCYDCARHVADFLRGNPNLSLRIFTARLYFCE 485 >5JJ4-C nrPDB Length = 546 Score = 26.2 bits (56), Expect = 9.4, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 14/37 (37%) Query: 124 FSHIYPCNWCAKDFEKYIRENAPQVESREELGRWMCE 160 F+ PC CA+ ++R N + CE Sbjct: 444 FTSWSPCYDCARHVADFLRGNPNLSLRIFTARLYFCE 480 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.135 0.420 Lambda K H 0.267 0.0406 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,542,332 Number of Sequences: 36641 Number of extensions: 335059 Number of successful extensions: 830 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 39 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 780 Number of HSP's gapped (non-prelim): 51 length of query: 189 length of database: 10,336,785 effective HSP length: 91 effective length of query: 98 effective length of database: 7,002,454 effective search space: 686240492 effective search space used: 686240492 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 56 (26.2 bits)