BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P27797 (417 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6ENY-G nrPDB 801 0.0 3RG0-A nrPDB 603 e-173 3POS-A nrPDB 394 e-110 3O0X-A nrPDB 378 e-105 1JHN-A nrPDB 243 9e-65 5HCA-C nrPDB 195 3e-50 1HHN-A nrPDB 195 4e-50 5HCF-A nrPDB 190 1e-48 1K9C-A nrPDB 144 1e-34 3AL0-B nrPDB 32 0.54 4ZS8-A nrPDB 29 3.6 3S69-A nrPDB 29 4.0 2QDX-A nrPDB 29 4.1 4ZSK-A nrPDB 28 6.2 3PPS-A nrPDB 28 6.4 3G4N-A nrPDB 28 8.0 6FRV-A nrPDB 28 8.4 3EQA-A nrPDB 28 8.5 4PSP-A nrPDB 28 8.8 >6ENY-G nrPDB Length = 400 Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust. Identities = 399/400 (99%), Positives = 399/400 (99%) Query: 18 EPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYAL 77 EPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYAL Sbjct: 1 EPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYAL 60 Query: 78 SASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDIC 137 SASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDIC Sbjct: 61 SASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDIC 120 Query: 138 GPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE 197 GPGTKKVHVIFNYKGKNVLINKDIR KDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE Sbjct: 121 GPGTKKVHVIFNYKGKNVLINKDIRSKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE 180 Query: 198 DDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEM 257 DDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEM Sbjct: 181 DDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEM 240 Query: 258 DGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLD 317 DGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLD Sbjct: 241 DGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLD 300 Query: 318 LWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRK 377 LWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRK Sbjct: 301 LWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRK 360 Query: 378 EEEEAEDKEDDEDKDEDEEDEEDKEEDEEEDVPGQAKDEL 417 EEEEAEDKEDDEDKDEDEEDEEDKEEDEEEDVPGQAKDEL Sbjct: 361 EEEEAEDKEDDEDKDEDEEDEEDKEEDEEEDVPGQAKDEL 400 >3RG0-A nrPDB Length = 332 Score = 603 bits (1555), Expect = e-173, Method: Compositional matrix adjust. Identities = 301/353 (85%), Positives = 310/353 (87%), Gaps = 30/353 (8%) Query: 18 EPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYAL 77 +PA+YFKEQFLDGD WT+RW+ESKHKSDFGKFVLSSGKFYGD EKDKGLQTSQDARFYAL Sbjct: 4 DPAIYFKEQFLDGDAWTNRWVESKHKSDFGKFVLSSGKFYGDLEKDKGLQTSQDARFYAL 63 Query: 78 SASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDIC 137 SA FEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFP+ LDQ DMHGDSEYNIMFGPDIC Sbjct: 64 SAKFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPSGLDQKDMHGDSEYNIMFGPDIC 123 Query: 138 GPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE 197 GPGTKKVHVIFNYKGKNVLINKDIR KDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE Sbjct: 124 GPGTKKVHVIFNYKGKNVLINKDIRSKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE 183 Query: 198 DDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEM 257 DDWDFLPPKKIKDPDA+KPEDWDERAKIDDPTDSKPEDWDK Sbjct: 184 DDWDFLPPKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDKGGS---------------- 227 Query: 258 DGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLD 317 GEW+P RQIDNPDYKGTWIHPEIDNPEYSPD +IYAYD+F VLGLD Sbjct: 228 GGEWKP--------------RQIDNPDYKGTWIHPEIDNPEYSPDANIYAYDSFAVLGLD 273 Query: 318 LWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEE 370 LWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLK E Sbjct: 274 LWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKLE 326 >3POS-A nrPDB Length = 265 Score = 394 bits (1011), Expect = e-110, Method: Compositional matrix adjust. Identities = 187/187 (100%), Positives = 187/187 (100%) Query: 18 EPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYAL 77 EPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYAL Sbjct: 9 EPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYAL 68 Query: 78 SASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDIC 137 SASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDIC Sbjct: 69 SASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDIC 128 Query: 138 GPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE 197 GPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE Sbjct: 129 GPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE 188 Query: 198 DDWDFLP 204 DDWDFLP Sbjct: 189 DDWDFLP 195 Score = 140 bits (353), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 72/90 (80%), Positives = 76/90 (84%) Query: 279 QIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAY 338 +IDN + + + D S DPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAY Sbjct: 176 KIDNSQVESGSLEDDWDFLPGSGDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAY 235 Query: 339 AEEFGNETWGVTKAAEKQMKDKQDEEQRLK 368 AEEFGNETWGVTKAAEKQMKDKQDEEQRLK Sbjct: 236 AEEFGNETWGVTKAAEKQMKDKQDEEQRLK 265 >3O0X-A nrPDB Length = 273 Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust. Identities = 178/189 (94%), Positives = 183/189 (96%) Query: 18 EPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYAL 77 +PA+YFKEQFLDGD WT+RW+ESKHKSDFGKFVLSSGKFYGD EKDKGLQTSQDARFYAL Sbjct: 4 DPAIYFKEQFLDGDAWTNRWVESKHKSDFGKFVLSSGKFYGDLEKDKGLQTSQDARFYAL 63 Query: 78 SASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDIC 137 SA FEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFP+ LDQ DMHGDSEYNIMFGPDIC Sbjct: 64 SAKFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPSGLDQKDMHGDSEYNIMFGPDIC 123 Query: 138 GPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE 197 GPGTKKVHVIFNYKGKNVLINKDIR KDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE Sbjct: 124 GPGTKKVHVIFNYKGKNVLINKDIRSKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE 183 Query: 198 DDWDFLPPK 206 DDWDFLPPK Sbjct: 184 DDWDFLPPK 192 Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 65/71 (91%), Positives = 67/71 (94%) Query: 300 SPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKD 359 PD +IYAYD+F VLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKD Sbjct: 197 GPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKD 256 Query: 360 KQDEEQRLKEE 370 KQDEEQRLK E Sbjct: 257 KQDEEQRLKLE 267 >1JHN-A nrPDB Length = 424 Score = 243 bits (621), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 155/400 (38%), Positives = 212/400 (53%), Gaps = 72/400 (18%) Query: 21 VYFKEQFLDGDGWTSRWIESKHKSD-----FGKFVLSSGKFYGDEEK------DKGLQTS 69 VYF + F G S WI SK K D K+ GK+ DE K DKGL Sbjct: 26 VYFADSF--DRGTLSGWILSKAKKDDTDDEIAKY---DGKWEVDEMKETKLPGDKGLVLM 80 Query: 70 QDARFYALSASF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNS--LDQTDMHGDS 126 A+ +A+SA +PF + L+VQ+ V + I+CGG YVKL + L+ H + Sbjct: 81 SRAKHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKT 140 Query: 127 EYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCK----------DDEFTHLYTLIV 176 Y IMFGPD CG K+H IF +K + ++ K D+ THLYTLI+ Sbjct: 141 PYTIMFGPDKCG-EDYKLHFIFRHKNPKTGVYEEKHAKRPDADLKTYFTDKKTHLYTLIL 199 Query: 177 RPDNTYEVKIDNSQVESGSLEDDWD--FLPPKKIKDPDASKPEDWDERAKIDDPTDSKPE 234 PDN++E+ +D S V SG+L +D P ++I+DP+ KPEDWDER KI DP KP+ Sbjct: 200 NPDNSFEILVDQSIVNSGNLLNDMTPPVNPSREIEDPEDQKPEDWDERPKIPDPDAVKPD 259 Query: 235 DW---------------------DKPEHIPDPDAKKPEDWDEEMDGEWEPP--------- 264 DW D+PE++PDPDA+KPEDWDE+MDGEWE P Sbjct: 260 DWNEDAPAKIPDEEATKPDGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPKCES 319 Query: 265 ----------VIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVL 314 +I NP YKG+WKP IDNP+Y+G W +I NP++ D + F + Sbjct: 320 APGCGVWQRPMIDNPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSAI 379 Query: 315 GLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAE 354 GL+LW + S FDNF++ D +++ N+ WG+ KAA+ Sbjct: 380 GLELWSMTSDIFFDNFIVCGDRRVVDDWANDGWGLKKAAD 419 >5HCA-C nrPDB Length = 274 Score = 195 bits (495), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 102/203 (50%), Positives = 136/203 (66%), Gaps = 10/203 (4%) Query: 21 VYFKEQFLDGDGWTSRWIESKHKSD-FGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSA 79 VYF E F + D +WI+S G F + SGK+YGD +KGLQTS+D +FY +A Sbjct: 5 VYFHETFENRD----KWIDSTSSGKALGPFKIVSGKWYGDAN-NKGLQTSEDNKFYIAAA 59 Query: 80 SF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTD--MHGDSEYNIMFGPDI 136 E FSNK + L+VQ+ +K EQ IDCGGGY+KL P +++ +SEYNIMFGPD+ Sbjct: 60 KLDEEFSNKDKNLIVQYNLKFEQGIDCGGGYIKLLPKKSIESEEKFTPESEYNIMFGPDV 119 Query: 137 CGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSL 196 CG G+K+ HVI NYKGKN LI K+I+C+ D+ +HLYTLI+RP+NTY VKID + + G Sbjct: 120 CG-GSKRTHVIMNYKGKNNLIRKEIKCESDDISHLYTLIIRPNNTYVVKIDGVEKQEGKF 178 Query: 197 EDDWDFLPPKKIKDPDASKPEDW 219 ++DWD L PK+I D D+ Sbjct: 179 DEDWDMLAPKEIDDGSGIANPDY 201 Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 1/72 (1%) Query: 294 IDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAA 353 I NP+Y DP +Y YD+F +G+D+WQVK+GTI+D+ LIT+D AE+ AA Sbjct: 196 IANPDYVYDPELYKYDSFAYIGIDVWQVKAGTIYDDILITDDIEEAEKEAKVILE-RNAA 254 Query: 354 EKQMKDKQDEEQ 365 EK+M+D+ E + Sbjct: 255 EKKMRDEIKEAE 266 >1HHN-A nrPDB Length = 101 Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 97/100 (97%), Positives = 99/100 (99%) Query: 206 KKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPV 265 KKIKDPDA+KPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPV Sbjct: 2 KKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPV 61 Query: 266 IQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSI 305 IQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPD +I Sbjct: 62 IQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANI 101 >5HCF-A nrPDB Length = 271 Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 94/192 (48%), Positives = 131/192 (68%), Gaps = 7/192 (3%) Query: 20 AVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSA 79 VYF E+F + WT+ SKH+ DFGK +S+GKFY D EK KGL+ ++DARFYALS Sbjct: 1 TVYFHEEFKSMEHWTT----SKHRDDFGKVEISAGKFYADAEKSKGLRLTEDARFYALST 56 Query: 80 SF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICG 138 +F P +N+ ++LVV F+VKHEQ++ CGGGY+KL P S+D HG+++Y +MFGPD CG Sbjct: 57 AFPTPINNEKKSLVVSFSVKHEQDLKCGGGYIKLLP-SMDPEKFHGETKYWLMFGPDRCG 115 Query: 139 PGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLED 198 +VH+I +Y G+N +K IR +D+ TH+YTL + DN+YE +D G LE+ Sbjct: 116 -SQNRVHIILHYNGENREWSKRIRFPEDKLTHVYTLHIAADNSYEFFLDGESKAKGQLEE 174 Query: 199 DWDFLPPKKIKD 210 DW L P++I D Sbjct: 175 DWSLLLPREIVD 186 Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Query: 294 IDNPEYSPDPSIYAY-DNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKA 352 I NP++ D ++ + +G+D+WQV+SG+IF + +I +D + +T+G K Sbjct: 190 IPNPDFVEDSELHKVPEPLTHVGIDVWQVESGSIFKDIVIGDDLKEVLDLVEKTYGGLKK 249 Query: 353 AEK-QMKDKQDEEQ 365 AE +K +D E+ Sbjct: 250 AEADALKVMEDMEK 263 >1K9C-A nrPDB Length = 74 Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 72/73 (98%), Positives = 73/73 (100%) Query: 206 KKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPV 265 KKIKDPDA+KPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPV Sbjct: 2 KKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPV 61 Query: 266 IQNPEYKGEWKPR 278 IQNPEYKGEWKPR Sbjct: 62 IQNPEYKGEWKPR 74 >3AL0-B nrPDB Length = 482 Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 73/193 (37%), Gaps = 26/193 (13%) Query: 116 SLDQTDMHGDSEYNIMFGPDICGPGTKKVHV-----IFNYKGKNV--LINKDIRCKDDEF 168 SL + G I+ PDI P +V + I Y G + + +RC D Sbjct: 144 SLVDMNRCGVPLIEIVTEPDISSPREARVFMEKLRSIVRYLGVSTGDMEKGALRC-DANI 202 Query: 169 THLYTLIVRPDNTYEVKIDNS-QVESGSLEDDWDFLPPKKIKDPDASK-PEDWDERAKID 226 + + T R N EVK NS + +LE +++ + + D + WD KI Sbjct: 203 SVVDTETGRQSNRVEVKNMNSFRFVERALEYEFERIVKAMERGEDVERETRGWDMATKIT 262 Query: 227 DPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYK 286 K E+ D + P+PD PPV+ + EY E K + PD K Sbjct: 263 VSMRGKEEESDY-RYFPEPDI---------------PPVVLSDEYLEEVKKELPELPDEK 306 Query: 287 GTWIHPEIDNPEY 299 E PEY Sbjct: 307 AERFMREYGLPEY 319 >4ZS8-A nrPDB Length = 257 Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 21/48 (43%) Query: 3 LSVPLLLGLLGLAVAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFV 50 L+ P GLLG V P + D G W+ S ++ D KFV Sbjct: 202 LATPREAGLLGTDVGLPMLMLSRHSQDRTGQPVEWVRSVYRGDRYKFV 249 >3S69-A nrPDB Length = 234 Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%) Query: 344 NETWGVTKA----AEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDED 394 NE W +T A QMK ++ L E+E+ + KE+ +K++DE D+D Sbjct: 32 NEEWVLTAAHCDNTNFQMKLGVHSKKVLNEDEQTRNPKEKFICPNKKNDEVLDKD 86 >2QDX-A nrPDB Length = 257 Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 8/54 (14%) Query: 36 RWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQ 89 RW+ +DF VL +++GD+ K+K + +Y L + EPF N+G+ Sbjct: 144 RWVSELAYADFITKVLPEHEYFGDQVKEKLI-------YYPL-VTREPFRNQGR 189 >4ZSK-A nrPDB Length = 171 Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 21/48 (43%) Query: 3 LSVPLLLGLLGLAVAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFV 50 L+ P GLLG V P + D G W+ S ++ D KFV Sbjct: 116 LATPREAGLLGTDVGLPMLMLSRHSQDRTGQPVEWVRSVYRGDRYKFV 163 >3PPS-A nrPDB Length = 604 Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust. Identities = 26/108 (24%), Positives = 41/108 (37%), Gaps = 23/108 (21%) Query: 116 SLDQTDMHGDSEYNIMFGPDICGPGTKKV-HVIFNYKGKNVLINKD-------IRCKDD- 166 ++D G+ +N+ FG +CG K IF Y+G + D C D+ Sbjct: 317 TIDANSPVGNYWFNVTFGDGLCGSSNNKFPAAIFRYQGAPATLPTDQGLPVPNHMCLDNL 376 Query: 167 EFTHLYT-------LIVRPDNTYEVKIDNS-------QVESGSLEDDW 200 T + T + RP NT V +D +V ++ DW Sbjct: 377 NLTPVVTRSAPVNNFVKRPSNTLGVTLDIGGTPLFVWKVNGSAINVDW 424 >3G4N-A nrPDB Length = 470 Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 13/59 (22%) Query: 257 MDGEWEPP------VIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYD 309 M G+W+ VI P Y GE KP N TW +P NP P++ A D Sbjct: 41 MMGQWQISGLANGWVIMGPGYNGEIKPGTASN-----TWCYPT--NPVTGEIPTLSALD 92 >6FRV-A nrPDB Length = 616 Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 4/68 (5%) Query: 279 QIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAY 338 +D Y G+W P+ D P I FG LD + T L+ ND +Y Sbjct: 110 NVDETAYTGSWGRPQRDGPALRATAMI----GFGQWLLDNGYTSTATDIVWPLVRNDLSY 165 Query: 339 AEEFGNET 346 ++ N+T Sbjct: 166 VAQYWNQT 173 >3EQA-A nrPDB Length = 470 Score = 27.7 bits (60), Expect = 8.5, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 4/68 (5%) Query: 279 QIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAY 338 +D Y G+W P+ D P I FG LD + T L+ ND +Y Sbjct: 110 NVDETAYTGSWGRPQRDGPALRATAMI----GFGQWLLDNGYTSTATDIVWPLVRNDLSY 165 Query: 339 AEEFGNET 346 ++ N+T Sbjct: 166 VAQYWNQT 173 >4PSP-A nrPDB Length = 585 Score = 27.7 bits (60), Expect = 8.8, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 11/89 (12%) Query: 223 AKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDN 282 AK D P ++ E DK H P+ + D + W +Y EW PR + Sbjct: 1 AKADGPYEATWESTDK--HNAAPEWYR----DAKFGVYWHWGAFTTAQYASEWYPRNMYE 54 Query: 283 PDYKGTWIHPEIDNPEYSPDPSIYAYDNF 311 PD H E P P + Y+NF Sbjct: 55 PDSDQRKHHTETYGP-----PEEWGYENF 78 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6ENY-G nrPDB 593 e-170 3RG0-A nrPDB 509 e-145 1JHN-A nrPDB 389 e-108 3O0X-A nrPDB 327 8e-90 3POS-A nrPDB 326 1e-89 5HCF-A nrPDB 274 4e-74 5HCA-C nrPDB 253 1e-67 1HHN-A nrPDB 141 5e-34 1K9C-A nrPDB 100 1e-21 Sequences not found previously or not previously below threshold: 5OV3-A nrPDB 35 0.058 6GMH-U nrPDB 34 0.12 6FF4-Y nrPDB 33 0.29 6EUG-A nrPDB 33 0.32 5A5T-C nrPDB 32 0.42 3JCN-b nrPDB 32 0.54 6QDV-c nrPDB 32 0.58 2VNU-D nrPDB 32 0.58 4ZSK-A nrPDB 31 0.81 4ZS8-A nrPDB 31 0.81 3KZ4-A nrPDB 31 0.91 6FAI-l nrPDB 31 0.96 3KYC-B nrPDB 31 1.1 3MGA-A nrPDB 31 1.2 5KKR-C nrPDB 30 1.4 5DGO-A nrPDB 30 1.5 4RM9-A nrPDB 30 1.5 3FRV-A nrPDB 30 1.8 5BW9-G nrPDB 30 2.0 2GD5-A nrPDB 30 2.2 3JAX-A nrPDB 30 2.3 2Y9Z-A nrPDB 30 2.3 6IP6-2L nrPDB 30 2.4 5DFZ-D nrPDB 30 2.4 6FF4-3 nrPDB 30 2.4 3FRT-A nrPDB 30 2.5 5YZG-3 nrPDB 29 3.3 5G5P-A nrPDB 29 3.8 1LT8-A nrPDB 29 4.1 1SO2-A nrPDB 29 4.6 5FUR-H nrPDB 29 4.8 6HQA-J nrPDB 29 5.9 4PSP-A nrPDB 28 6.3 6FAI-k nrPDB 28 8.0 5WWN-A nrPDB 28 8.1 CONVERGED! >6ENY-G nrPDB Length = 400 Score = 593 bits (1529), Expect = e-170, Method: Composition-based stats. Identities = 399/400 (99%), Positives = 399/400 (99%) Query: 18 EPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYAL 77 EPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYAL Sbjct: 1 EPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYAL 60 Query: 78 SASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDIC 137 SASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDIC Sbjct: 61 SASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDIC 120 Query: 138 GPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE 197 GPGTKKVHVIFNYKGKNVLINKDIR KDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE Sbjct: 121 GPGTKKVHVIFNYKGKNVLINKDIRSKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE 180 Query: 198 DDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEM 257 DDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEM Sbjct: 181 DDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEM 240 Query: 258 DGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLD 317 DGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLD Sbjct: 241 DGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLD 300 Query: 318 LWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRK 377 LWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRK Sbjct: 301 LWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRK 360 Query: 378 EEEEAEDKEDDEDKDEDEEDEEDKEEDEEEDVPGQAKDEL 417 EEEEAEDKEDDEDKDEDEEDEEDKEEDEEEDVPGQAKDEL Sbjct: 361 EEEEAEDKEDDEDKDEDEEDEEDKEEDEEEDVPGQAKDEL 400 >3RG0-A nrPDB Length = 332 Score = 509 bits (1311), Expect = e-145, Method: Composition-based stats. Identities = 301/353 (85%), Positives = 310/353 (87%), Gaps = 30/353 (8%) Query: 18 EPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYAL 77 +PA+YFKEQFLDGD WT+RW+ESKHKSDFGKFVLSSGKFYGD EKDKGLQTSQDARFYAL Sbjct: 4 DPAIYFKEQFLDGDAWTNRWVESKHKSDFGKFVLSSGKFYGDLEKDKGLQTSQDARFYAL 63 Query: 78 SASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDIC 137 SA FEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFP+ LDQ DMHGDSEYNIMFGPDIC Sbjct: 64 SAKFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPSGLDQKDMHGDSEYNIMFGPDIC 123 Query: 138 GPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE 197 GPGTKKVHVIFNYKGKNVLINKDIR KDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE Sbjct: 124 GPGTKKVHVIFNYKGKNVLINKDIRSKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE 183 Query: 198 DDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEM 257 DDWDFLPPKKIKDPDA+KPEDWDERAKIDDPTDSKPEDWDK Sbjct: 184 DDWDFLPPKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDKGGS---------------- 227 Query: 258 DGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLD 317 GEW+P RQIDNPDYKGTWIHPEIDNPEYSPD +IYAYD+F VLGLD Sbjct: 228 GGEWKP--------------RQIDNPDYKGTWIHPEIDNPEYSPDANIYAYDSFAVLGLD 273 Query: 318 LWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEE 370 LWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLK E Sbjct: 274 LWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKLE 326 >1JHN-A nrPDB Length = 424 Score = 389 bits (1000), Expect = e-108, Method: Composition-based stats. Identities = 154/397 (38%), Positives = 212/397 (53%), Gaps = 66/397 (16%) Query: 21 VYFKEQFLDGDGWTSRWIESKHKSDFGKFVLS--SGKFYGDEEK------DKGLQTSQDA 72 VYF + F G S WI SK K D ++ GK+ DE K DKGL A Sbjct: 26 VYFADSF--DRGTLSGWILSKAKKDDTDDEIAKYDGKWEVDEMKETKLPGDKGLVLMSRA 83 Query: 73 RFYALSASF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNS--LDQTDMHGDSEYN 129 + +A+SA +PF + L+VQ+ V + I+CGG YVKL + L+ H + Y Sbjct: 84 KHHAISAKLNKPFLFDTKPLIVQYEVNFQNGIECGGAYVKLLSKTPELNLDQFHDKTPYT 143 Query: 130 IMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCK----------DDEFTHLYTLIVRPD 179 IMFGPD CG K+H IF +K + ++ K D+ THLYTLI+ PD Sbjct: 144 IMFGPDKCG-EDYKLHFIFRHKNPKTGVYEEKHAKRPDADLKTYFTDKKTHLYTLILNPD 202 Query: 180 NTYEVKIDNSQVESGSLEDDWD--FLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDW- 236 N++E+ +D S V SG+L +D P ++I+DP+ KPEDWDER KI DP KP+DW Sbjct: 203 NSFEILVDQSIVNSGNLLNDMTPPVNPSREIEDPEDQKPEDWDERPKIPDPDAVKPDDWN 262 Query: 237 --------------------DKPEHIPDPDAKKPEDWDEEMDGEWEPP------------ 264 D+PE++PDPDA+KPEDWDE+MDGEWE P Sbjct: 263 EDAPAKIPDEEATKPDGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPG 322 Query: 265 -------VIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLD 317 +I NP YKG+WKP IDNP+Y+G W +I NP++ D + F +GL+ Sbjct: 323 CGVWQRPMIDNPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSAIGLE 382 Query: 318 LWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAE 354 LW + S FDNF++ D +++ N+ WG+ KAA+ Sbjct: 383 LWSMTSDIFFDNFIVCGDRRVVDDWANDGWGLKKAAD 419 >3O0X-A nrPDB Length = 273 Score = 327 bits (837), Expect = 8e-90, Method: Composition-based stats. Identities = 180/206 (87%), Positives = 187/206 (90%) Query: 18 EPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYAL 77 +PA+YFKEQFLDGD WT+RW+ESKHKSDFGKFVLSSGKFYGD EKDKGLQTSQDARFYAL Sbjct: 4 DPAIYFKEQFLDGDAWTNRWVESKHKSDFGKFVLSSGKFYGDLEKDKGLQTSQDARFYAL 63 Query: 78 SASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDIC 137 SA FEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFP+ LDQ DMHGDSEYNIMFGPDIC Sbjct: 64 SAKFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPSGLDQKDMHGDSEYNIMFGPDIC 123 Query: 138 GPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE 197 GPGTKKVHVIFNYKGKNVLINKDIR KDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE Sbjct: 124 GPGTKKVHVIFNYKGKNVLINKDIRSKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE 183 Query: 198 DDWDFLPPKKIKDPDASKPEDWDERA 223 DDWDFLPPK + +D A Sbjct: 184 DDWDFLPPKGSGSGPDANIYAYDSFA 209 Score = 140 bits (353), Expect = 9e-34, Method: Composition-based stats. Identities = 69/97 (71%), Positives = 75/97 (77%), Gaps = 5/97 (5%) Query: 279 QIDNPDYKGTWIHPEIDNPE-----YSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLIT 333 +IDN + + + D PD +IYAYD+F VLGLDLWQVKSGTIFDNFLIT Sbjct: 171 KIDNSQVESGSLEDDWDFLPPKGSGSGPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLIT 230 Query: 334 NDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEE 370 NDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLK E Sbjct: 231 NDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKLE 267 >3POS-A nrPDB Length = 265 Score = 326 bits (836), Expect = 1e-89, Method: Composition-based stats. Identities = 187/187 (100%), Positives = 187/187 (100%) Query: 18 EPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYAL 77 EPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYAL Sbjct: 9 EPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYAL 68 Query: 78 SASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDIC 137 SASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDIC Sbjct: 69 SASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDIC 128 Query: 138 GPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE 197 GPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE Sbjct: 129 GPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLE 188 Query: 198 DDWDFLP 204 DDWDFLP Sbjct: 189 DDWDFLP 195 Score = 145 bits (366), Expect = 3e-35, Method: Composition-based stats. Identities = 72/90 (80%), Positives = 76/90 (84%) Query: 279 QIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAY 338 +IDN + + + D S DPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAY Sbjct: 176 KIDNSQVESGSLEDDWDFLPGSGDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAY 235 Query: 339 AEEFGNETWGVTKAAEKQMKDKQDEEQRLK 368 AEEFGNETWGVTKAAEKQMKDKQDEEQRLK Sbjct: 236 AEEFGNETWGVTKAAEKQMKDKQDEEQRLK 265 >5HCF-A nrPDB Length = 271 Score = 274 bits (701), Expect = 4e-74, Method: Composition-based stats. Identities = 98/213 (46%), Positives = 139/213 (65%), Gaps = 10/213 (4%) Query: 20 AVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSA 79 VYF E+F + WT+ SKH+ DFGK +S+GKFY D EK KGL+ ++DARFYALS Sbjct: 1 TVYFHEEFKSMEHWTT----SKHRDDFGKVEISAGKFYADAEKSKGLRLTEDARFYALST 56 Query: 80 SF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICG 138 +F P +N+ ++LVV F+VKHEQ++ CGGGY+KL P S+D HG+++Y +MFGPD CG Sbjct: 57 AFPTPINNEKKSLVVSFSVKHEQDLKCGGGYIKLLP-SMDPEKFHGETKYWLMFGPDRCG 115 Query: 139 PGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLED 198 +VH+I +Y G+N +K IR +D+ TH+YTL + DN+YE +D G LE+ Sbjct: 116 -SQNRVHIILHYNGENREWSKRIRFPEDKLTHVYTLHIAADNSYEFFLDGESKAKGQLEE 174 Query: 199 DWDFLPPKKIKDPDASKPEDWDERA---KIDDP 228 DW L P++I D D+ E + K+ +P Sbjct: 175 DWSLLLPREIVDGSGIPNPDFVEDSELHKVPEP 207 Score = 55.5 bits (132), Expect = 4e-08, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 63/153 (41%), Gaps = 23/153 (15%) Query: 215 KPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGE 274 + +W +R + + DK H+ ++ +DGE + ++ Sbjct: 129 ENREWSKRIRFPE---------DKLTHVYTLHIAADNSYEFFLDGESKAKGQLEEDWSLL 179 Query: 275 WKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAY-DNFGVLGLDLWQVKSGTIFDNFLIT 333 +D I NP++ D ++ + +G+D+WQV+SG+IF + +I Sbjct: 180 LPREIVDGSG---------IPNPDFVEDSELHKVPEPLTHVGIDVWQVESGSIFKDIVIG 230 Query: 334 NDEAYAEEFGNETWGVTKAAE----KQMKDKQD 362 +D + +T+G K AE K M+D + Sbjct: 231 DDLKEVLDLVEKTYGGLKKAEADALKVMEDMEK 263 >5HCA-C nrPDB Length = 274 Score = 253 bits (645), Expect = 1e-67, Method: Composition-based stats. Identities = 102/203 (50%), Positives = 134/203 (66%), Gaps = 10/203 (4%) Query: 21 VYFKEQFLDGDGWTSRWIESKHKSD-FGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSA 79 VYF E F + D +WI+S G F + SGK+YGD +KGLQTS+D +FY +A Sbjct: 5 VYFHETFENRD----KWIDSTSSGKALGPFKIVSGKWYGDAN-NKGLQTSEDNKFYIAAA 59 Query: 80 SF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQ--TDMHGDSEYNIMFGPDI 136 E FSNK + L+VQ+ +K EQ IDCGGGY+KL P + +SEYNIMFGPD+ Sbjct: 60 KLDEEFSNKDKNLIVQYNLKFEQGIDCGGGYIKLLPKKSIESEEKFTPESEYNIMFGPDV 119 Query: 137 CGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSL 196 CG G+K+ HVI NYKGKN LI K+I+C+ D+ +HLYTLI+RP+NTY VKID + + G Sbjct: 120 CG-GSKRTHVIMNYKGKNNLIRKEIKCESDDISHLYTLIIRPNNTYVVKIDGVEKQEGKF 178 Query: 197 EDDWDFLPPKKIKDPDASKPEDW 219 ++DWD L PK+I D D+ Sbjct: 179 DEDWDMLAPKEIDDGSGIANPDY 201 Score = 94.8 bits (234), Expect = 6e-20, Method: Composition-based stats. Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 1/72 (1%) Query: 294 IDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAA 353 I NP+Y DP +Y YD+F +G+D+WQVK+GTI+D+ LIT+D AE+ AA Sbjct: 196 IANPDYVYDPELYKYDSFAYIGIDVWQVKAGTIYDDILITDDIEEAEKEAKVILE-RNAA 254 Query: 354 EKQMKDKQDEEQ 365 EK+M+D+ E + Sbjct: 255 EKKMRDEIKEAE 266 >1HHN-A nrPDB Length = 101 Score = 141 bits (355), Expect = 5e-34, Method: Composition-based stats. Identities = 97/101 (96%), Positives = 99/101 (98%) Query: 205 PKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPP 264 KKIKDPDA+KPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPP Sbjct: 1 SKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPP 60 Query: 265 VIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSI 305 VIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPD +I Sbjct: 61 VIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANI 101 >1K9C-A nrPDB Length = 74 Score = 100 bits (248), Expect = 1e-21, Method: Composition-based stats. Identities = 72/74 (97%), Positives = 73/74 (98%) Query: 205 PKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPP 264 KKIKDPDA+KPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPP Sbjct: 1 SKKIKDPDAAKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPP 60 Query: 265 VIQNPEYKGEWKPR 278 VIQNPEYKGEWKPR Sbjct: 61 VIQNPEYKGEWKPR 74 >5OV3-A nrPDB Length = 381 Score = 35.1 bits (79), Expect = 0.058, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 353 AEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEEDV 409 A+ Q+++ KE +E+ + EE E+E +DEDK E ++ D EDEE DV Sbjct: 323 AQNQVENWSAFAPDFKELDENVEY-EERESEFDIEDEDKSEPKQTGADAAEDEEVDV 378 >6GMH-U nrPDB Length = 776 Score = 33.9 bits (76), Expect = 0.12, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 41/80 (51%) Query: 328 DNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKED 387 D+ I N + G++ + + + + D+E+R + ++++++ EEE + +D Sbjct: 265 DDEKIQNSDDEERAQGSDEDKLQNSDDDEKMQNTDDEERPQLSDDERQQLSEEEKANSDD 324 Query: 388 DEDKDEDEEDEEDKEEDEEE 407 + D +DE+ +DEE+ Sbjct: 325 ERPVASDNDDEKQNSDDEEQ 344 Score = 28.5 bits (62), Expect = 5.3, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 37/68 (54%), Gaps = 5/68 (7%) Query: 354 EKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEE-----ED 408 + + + + +++R + EE+K ++E ++D++K +++E+ + DEE +D Sbjct: 299 DDEERPQLSDDERQQLSEEEKANSDDERPVASDNDDEKQNSDDEEQPQLSDEEKMQNSDD 358 Query: 409 VPGQAKDE 416 QA DE Sbjct: 359 ERPQASDE 366 Score = 28.2 bits (61), Expect = 6.9, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 33/57 (57%) Query: 350 TKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEE 406 + ++ K D+E+ + + +D+K+ ++E + + DE+K ++ +DE + DEE Sbjct: 311 RQQLSEEEKANSDDERPVASDNDDEKQNSDDEEQPQLSDEEKMQNSDDERPQASDEE 367 Score = 28.2 bits (61), Expect = 7.6, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 28/47 (59%) Query: 358 KDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEED 404 K D+E++ + +E+K + ++E D+E + D+E+E+D + + Sbjct: 336 KQNSDDEEQPQLSDEEKMQNSDDERPQASDEEHRHSDDEEEQDHKSE 382 >6FF4-Y nrPDB Length = 904 Score = 32.8 bits (73), Expect = 0.29, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 339 AEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEEDE 398 A EF E W + +A++ + LK +EE K+R+ E+E +D+D+D+ D+ Sbjct: 98 AREFMGELWPLLLSAQENIAGIPSAFLELK-KEEIKQRQIEQEKLASMKKQDEDKDKRDK 156 Query: 399 EDKEEDEE 406 E+KE E Sbjct: 157 EEKESSRE 164 >6EUG-A nrPDB Length = 374 Score = 32.8 bits (73), Expect = 0.32, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 13/103 (12%) Query: 31 DGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQT 90 + WT +W E+ K F K L G+ +D L D + Y + +S Sbjct: 186 EWWTPKWYEAIAKGMFVKRDLKDGQ----MSRDMTLFVDDDGKAYHIYSS-------EDN 234 Query: 91 LVVQFTVKHEQNIDCGGGYVKLFPNSLDQTD--MHGDSEYNIM 131 L +Q + + G Y+++FP ++ + Y ++ Sbjct: 235 LTLQIAELADDYLSHTGKYIRIFPGGHNEAPAIFKKEGTYWMI 277 >5A5T-C nrPDB Length = 843 Score = 32.4 bits (72), Expect = 0.42, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 15/79 (18%) Query: 337 AYAEEFGNETWGVTKAA---------------EKQMKDKQDEEQRLKEEEEDKKRKEEEE 381 A E++ NE W + +K K +D E + +++ ++ +E+ Sbjct: 41 ADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRDFESHITNYKQNPEQSADED 100 Query: 382 AEDKEDDEDKDEDEEDEED 400 AE E+D + DE+++ED Sbjct: 101 AEKNEEDSEGSSDEDEDED 119 >3JCN-b nrPDB Length = 890 Score = 32.0 bits (71), Expect = 0.54, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 24/49 (48%) Query: 337 AYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDK 385 A+ E V+ + K+ Q E+ R ++E + KRK EEEA K Sbjct: 146 EQAKREAAEKDKVSNQQDDMTKNAQAEKARREQEAAELKRKAEEEARRK 194 Score = 29.7 bits (65), Expect = 2.3, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Query: 358 KDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEEDVPGQAKDEL 417 ++ Q + +R E E KR+ E+A+ + ++DK +++D+ K E+ Q EL Sbjct: 126 REAQQKAER--EAAEQAKREAAEQAKREAAEKDKVSNQQDDMTKNAQAEKARREQEAAEL 183 >6QDV-c nrPDB Length = 586 Score = 31.6 bits (70), Expect = 0.58, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 37/79 (46%), Gaps = 3/79 (3%) Query: 337 AYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEE 396 EE+ ++++++ + +++ K + EEE + + KD + E Sbjct: 180 KIVEEYAKVDLAKRTLKAQKLQEELASGKLVEQANSPKHQWGEEEPNSQME---KDHNSE 236 Query: 397 DEEDKEEDEEEDVPGQAKD 415 DE++ + ++ D+PGQ D Sbjct: 237 DEDEDKYADDIDMPGQNFD 255 >2VNU-D nrPDB Length = 760 Score = 31.6 bits (70), Expect = 0.58, Method: Composition-based stats. Identities = 58/290 (20%), Positives = 109/290 (37%), Gaps = 47/290 (16%) Query: 111 KLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEF-- 168 +L P+S+D + + I+ D C P V + L++K I D + Sbjct: 165 QLAPSSVDPQSSSTQNVFVILM--DKCLPK-----VRIRTRRAAELLDKRIVISIDSWPT 217 Query: 169 THLYTL--IVRPDNTYEVKIDNSQVESGSLEDDWDFLP-PKKIKDPDASKPEDWDERAKI 225 TH Y L VR T E ++ E+ LE D ++ P KK+ + ++ DW K+ Sbjct: 218 THKYPLGHFVRDLGTIESA--QAETEALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKL 275 Query: 226 DDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDY 285 DDP DP K +D +++ +PP + +++ N ++ Sbjct: 276 DDPEAVS----------KDPLLTKRKDLRDKLICSIDPPGCVDIN--DALHAKKLPNGNW 323 Query: 286 KGTWIHPEIDN---PEYSPDPSIYAYDNFGVL---GLDLWQVKSGTIFDNFLITNDEAYA 339 + ++ + P + D A L +D+ + GT + + + Y Sbjct: 324 EVGVHIADVTHFVKPGTALDAEGAARGTSVYLVDKRIDMLPMLLGTD-----LCSLKPYV 378 Query: 340 EEFG-NETWGVTKAAE----KQMKDKQDEEQRLKEEE-----EDKKRKEE 379 + F + W + +A MK + E+ +DK + +E Sbjct: 379 DRFAFSVIWELDDSANIVNVNFMKSVIRSREAFSYEQAQLRIDDKTQNDE 428 >4ZSK-A nrPDB Length = 171 Score = 31.2 bits (69), Expect = 0.81, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 21/48 (43%) Query: 3 LSVPLLLGLLGLAVAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFV 50 L+ P GLLG V P + D G W+ S ++ D KFV Sbjct: 116 LATPREAGLLGTDVGLPMLMLSRHSQDRTGQPVEWVRSVYRGDRYKFV 163 >4ZS8-A nrPDB Length = 257 Score = 31.2 bits (69), Expect = 0.81, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 21/48 (43%) Query: 3 LSVPLLLGLLGLAVAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFV 50 L+ P GLLG V P + D G W+ S ++ D KFV Sbjct: 202 LATPREAGLLGTDVGLPMLMLSRHSQDRTGQPVEWVRSVYRGDRYKFV 249 >3KZ4-A nrPDB Length = 880 Score = 31.2 bits (69), Expect = 0.91, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 26/51 (50%) Query: 356 QMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEE 406 Q KD + ++Q + + DK ++EE +E K DE + KEE ++ Sbjct: 21 QEKDDEKQDQNNRMQLSDKVLSKKEEVVTDSQEEIKIADEVKKSTKEESKQ 71 >6FAI-l nrPDB Length = 425 Score = 30.9 bits (68), Expect = 0.96, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 27/51 (52%) Query: 359 DKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEEDV 409 + D+ + EEE+ + EE E + + D + E+D ED +E+E E + Sbjct: 353 NSDDDMSNDEAEEENGEGDYSEEDEYYDSELDNESSEDDSEDAQEEENERI 403 >3KYC-B nrPDB Length = 660 Score = 30.9 bits (68), Expect = 1.1, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 44/92 (47%), Gaps = 3/92 (3%) Query: 320 QVKSGTIFDNFLITNDEAYAEEFGNET-WGVTKAAEKQMKDKQ--DEEQRLKEEEEDKKR 376 ++++ ++ + + ++E+ G + + V A +++ KQ D + + +D + Sbjct: 536 RLQADDFLQDYTLLINILHSEDLGKDVEFEVVGDAPEKVGPKQAEDAAKSITNGSDDGAQ 595 Query: 377 KEEEEAEDKEDDEDKDEDEEDEEDKEEDEEED 408 A++++D D DEED + + EE+ Sbjct: 596 PSTSTAQEQDDVLIVDSDEEDSSNNADVSEEE 627 >3MGA-A nrPDB Length = 407 Score = 30.9 bits (68), Expect = 1.2, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 25/72 (34%), Gaps = 7/72 (9%) Query: 179 DNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPEDW-----DERAKIDDPTDSKP 233 D+ + + L + W L P+ I DP + W + ++ P Sbjct: 103 DDVFAAFAPGETPDRNVLREGWRQLLPQAIADP--LNSQSWRGGRGHAVSALEMPDAPLQ 160 Query: 234 EDWDKPEHIPDP 245 WD+PE P Sbjct: 161 PGWDRPETPYSP 172 >5KKR-C nrPDB Length = 395 Score = 30.5 bits (67), Expect = 1.4, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 27/47 (57%) Query: 350 TKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEE 396 T +AE ++ Q + + L+ +E+ +KR E + ++ E KD+D E Sbjct: 25 TSSAETNLEALQKKLEELELDEQQRKRLEAFLTQKQKVGELKDDDFE 71 >5DGO-A nrPDB Length = 555 Score = 30.5 bits (67), Expect = 1.5, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 47/134 (35%), Gaps = 15/134 (11%) Query: 279 QIDNPDYK----GTWIHPEIDNPEYSPDPSIYAYDNFG--VLGLDLWQVKSGTIFDNFLI 332 Q D+ Y W E E+ + N G V LD+ Q TIF + Sbjct: 41 QCDHVQYTLVPVSGWQELETAFLEHKEQFHYFILINCGANVDLLDILQPDEDTIF---FV 97 Query: 333 TNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKD 392 + V + ++ KQD++ + ED R EEE+ E +D D Sbjct: 98 CDTHRPVN-----VVNVYNDTQIKLLIKQDDDLEVP-AYEDIFRDEEEDEEHSGNDSDGS 151 Query: 393 EDEEDEEDKEEDEE 406 E E + + E Sbjct: 152 EPVEQTMRRRQRRE 165 >4RM9-A nrPDB Length = 587 Score = 30.5 bits (67), Expect = 1.5, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 2/104 (1%) Query: 316 LDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKK 375 +++ Q+K+ + + E V + E+ M++K++ RL++ EE K Sbjct: 301 IEVQQMKAQAREEKHQKQLERQQLETEKKRRETVEREKEQMMREKEELMLRLQDYEEKTK 360 Query: 376 RKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEED--VPGQAKDEL 417 + E E +E + +E+ + +++ E E D +AK+EL Sbjct: 361 KAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEEL 404 >3FRV-A nrPDB Length = 152 Score = 30.1 bits (66), Expect = 1.8, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 25/46 (54%) Query: 336 EAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEE 381 + E+ + + ++Q++D Q EE+++K +D +K +++ Sbjct: 15 KELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKD 60 >5BW9-G nrPDB Length = 256 Score = 30.1 bits (66), Expect = 2.0, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 24/48 (50%) Query: 359 DKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEE 406 D+ D E+ + ++ +K++ E D E +D E+D + DEE Sbjct: 193 DELDREEFYRLKKVQEKKQNETAKLDAEMKLKRDRAEQDASEVAADEE 240 >2GD5-A nrPDB Length = 179 Score = 29.7 bits (65), Expect = 2.2, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 25/46 (54%) Query: 336 EAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEE 381 + E+ + + ++Q++D Q EE+++K +D +K +++ Sbjct: 9 KELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKD 54 >3JAX-A nrPDB Length = 974 Score = 29.7 bits (65), Expect = 2.3, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 25/43 (58%) Query: 351 KAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDE 393 +A K+M ++ ++E+ + E KKRK E+E + + D D E Sbjct: 927 EAKVKEMNERLEDEEEMNAELTAKKRKLEDECSELKRDIDDLE 969 Score = 29.3 bits (64), Expect = 3.2, Method: Composition-based stats. Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 8/58 (13%) Query: 354 EKQMKDKQDEEQRLKE--EEEDKKRKEEEEA-----EDKEDDEDKDEDEEDE-EDKEE 403 EK+M ++E RLKE E+ + +RKE EE ++K D + + + E+D D EE Sbjct: 857 EKEMASMKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEE 914 >2Y9Z-A nrPDB Length = 374 Score = 29.7 bits (65), Expect = 2.3, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 29/58 (50%) Query: 340 EEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEED 397 E+ N + A + +MK + + +R++EE D+ E+E + E + K ED + Sbjct: 293 EKEFNAGIVLDDATKDRMKKEDENGKRIREEFADQTANEKENVDGVESKKAKIEDTSN 350 >6IP6-2L nrPDB Length = 196 Score = 29.7 bits (65), Expect = 2.4, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 28/47 (59%) Query: 353 AEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEEDEE 399 A K++ Q E +R K +E K+R+E +A+ +E + ++EE ++ Sbjct: 150 ARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK 196 >5DFZ-D nrPDB Length = 559 Score = 29.7 bits (65), Expect = 2.4, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 9/98 (9%) Query: 317 DLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKR 376 ++ +K + D+ LIT+ + ++ +T + E+QR + + Sbjct: 67 EIQNIKDLNLIDDKLITDSFVFLNHDDDDNANITSNS--------REDQRYGNANGNDNK 118 Query: 377 KEEEEAEDKEDDEDKDEDEEDEEDKEEDEEEDVPGQAK 414 K + D +D DEE++E +EDE + + +K Sbjct: 119 KANSDTSDGTSTF-RDHDEEEQEATDEDENQQIQLNSK 155 >6FF4-3 nrPDB Length = 619 Score = 29.7 bits (65), Expect = 2.4, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 71/201 (35%), Gaps = 28/201 (13%) Query: 192 ESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKP---EDWDKPEHIPDPDAK 248 ++ E D D PP+K + ++ ++D D + D P H P Sbjct: 314 KNSKYEYDPDISPPRK-----KQAKSHFGDKKQLDSKGDCQKATDSDLSSPRHKQSPGH- 367 Query: 249 KPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAY 308 +D D ++ P ++ + R+ P P +Y+ Sbjct: 368 --QDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYS- 424 Query: 309 DNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVT---KAAEKQMKDKQDEEQ 365 K+G + + I ++ +E ET + AE +DK ++ Sbjct: 425 -----------GAKTGLVLTD--IQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKR 471 Query: 366 RLKEEEEDKKRKEEEEAEDKE 386 LK E +++RK E+++E E Sbjct: 472 NLKLERLEQRRKAEKDSERDE 492 >3FRT-A nrPDB Length = 218 Score = 29.7 bits (65), Expect = 2.5, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 25/46 (54%) Query: 336 EAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEE 381 + E+ + + ++Q++D Q EE+++K +D +K +++ Sbjct: 9 KELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKD 54 >5YZG-3 nrPDB Length = 754 Score = 29.3 bits (64), Expect = 3.3, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 5/65 (7%) Query: 354 EKQMKDKQD----EEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEEDV 409 EK+M+ + E + KE++ D K K++E + KE + + E + +E D + +E+D Sbjct: 482 EKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSK-QLESKSNEHDHSKSKEKDR 540 Query: 410 PGQAK 414 Q++ Sbjct: 541 RAQSR 545 >5G5P-A nrPDB Length = 805 Score = 28.9 bits (63), Expect = 3.8, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 32/66 (48%) Query: 344 NETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEE 403 N T +KA +++L E+E+ ++KEE+ E+++ K ++ D++ E Sbjct: 669 NSTVEASKAHMISTTSNGAYDEKLSSEQEEMRKKEEQRIEEEKTQLKKKQENADKQVITE 728 Query: 404 DEEEDV 409 D+ Sbjct: 729 QIANDL 734 >1LT8-A nrPDB Length = 406 Score = 28.9 bits (63), Expect = 4.1, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Query: 326 IFDNFLITNDEAYAEEFGN-ETWGVTKAAEKQMKDKQ-DEEQRLKEEEEDKKRKEE 379 ++N I + Y + WGVTK + M+ K+ EQ+LKE E +K K + Sbjct: 351 YWENLRIASGRPYNPSMSKPDGWGVTKGTAELMQQKEATTEQQLKELFEKQKFKSQ 406 >1SO2-A nrPDB Length = 420 Score = 28.9 bits (63), Expect = 4.6, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 16/25 (64%) Query: 378 EEEEAEDKEDDEDKDEDEEDEEDKE 402 E EE D E +D+D +E D ED+E Sbjct: 362 EAEEDNDTESGDDEDGEELDTEDEE 386 >5FUR-H nrPDB Length = 349 Score = 28.5 bits (62), Expect = 4.8, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 5/93 (5%) Query: 330 FLITNDEAYAEEFGNETWGVTKAAEKQMKD-----KQDEEQRLKEEEEDKKRKEEEEAED 384 L T+ EA + + TK AE Q D Q E D+ R+ + Sbjct: 169 LLSTDAEAVSTRWEIIAEDETKEAENQGLDISSPGMSGHRQGHDSLEHDELREIFNDLSS 228 Query: 385 KEDDEDKDEDEEDEEDKEEDEEEDVPGQAKDEL 417 +DED+ + +++E+ D EED+ Q +D+L Sbjct: 229 SSEDEDETQHQDEEDINIIDTEEDLERQLQDKL 261 >6HQA-J nrPDB Length = 553 Score = 28.5 bits (62), Expect = 5.9, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Query: 364 EQRLKE---EEEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEEDVPGQAK 414 + RLK EE K+KE +EA D +K+ ++D E K E + +AK Sbjct: 78 KDRLKLGRVEELMNKQKEIQEARKLFDSNEKETKDDDIEKKRRKEAKRAIKEAK 131 >4PSP-A nrPDB Length = 585 Score = 28.2 bits (61), Expect = 6.3, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 33/91 (36%), Gaps = 15/91 (16%) Query: 223 AKIDDPTDSKPEDWDKPEHIPDPDAKKPEDW--DEEMDGEWEPPVIQNPEYKGEWKPRQI 280 AK D P ++ E DK P+ W D + W +Y EW PR + Sbjct: 1 AKADGPYEATWESTDKHNAAPE--------WYRDAKFGVYWHWGAFTTAQYASEWYPRNM 52 Query: 281 DNPDYKGTWIHPEIDNPEYSPDPSIYAYDNF 311 PD H E P P + Y+NF Sbjct: 53 YEPDSDQRKHHTETYGP-----PEEWGYENF 78 >6FAI-k nrPDB Length = 788 Score = 28.2 bits (61), Expect = 8.0, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 22/95 (23%) Query: 326 IFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDK 385 D+ + N+E AE+ T ++ M + D+E ++++ E+ EE + ED Sbjct: 404 YLDDVIDANEEEEAEQ--------TNGKDETMM-EIDDEMMVEQDNEEVAGDEEYDIEDN 454 Query: 386 ED-------------DEDKDEDEEDEEDKEEDEEE 407 E E +D ++ED E +E E E Sbjct: 455 EGFEELSPEEEERQLREFRDMEKEDREFPDEIELE 489 >5WWN-A nrPDB Length = 709 Score = 27.8 bits (60), Expect = 8.1, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 22/95 (23%) Query: 326 IFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDK 385 D+ + N+E AE+ T ++ M + D+E ++++ E+ EE + ED Sbjct: 325 YLDDVIDANEEEEAEQ--------TNGKDETMM-EIDDEMMVEQDNEEVAGDEEYDIEDN 375 Query: 386 ED-------------DEDKDEDEEDEEDKEEDEEE 407 E E +D ++ED E +E E E Sbjct: 376 EGFEELSPEEEERQLREFRDMEKEDREFPDEIELE 410 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.302 0.129 0.359 Lambda K H 0.267 0.0390 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,122,727 Number of Sequences: 36641 Number of extensions: 849576 Number of successful extensions: 12514 Number of sequences better than 10.0: 245 Number of HSP's better than 10.0 without gapping: 405 Number of HSP's successfully gapped in prelim test: 98 Number of HSP's that attempted gapping in prelim test: 4188 Number of HSP's gapped (non-prelim): 3790 length of query: 417 length of database: 10,336,785 effective HSP length: 100 effective length of query: 317 effective length of database: 6,672,685 effective search space: 2115241145 effective search space used: 2115241145 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.3 bits) S2: 60 (27.8 bits)