BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P27731
         (150 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

1TFP-A nrPDB                                                          269   3e-73
5E4A-A nrPDB                                                          216   3e-57
1IE4-A nrPDB                                                          213   3e-56
5H0Z-A nrPDB                                                          192   7e-50
6GNM-A nrPDB                                                          171   9e-44
3IWU-A nrPDB                                                           86   4e-18
2H6U-A nrPDB                                                           83   6e-17
2G2N-A nrPDB                                                           62   7e-11
2GPZ-A nrPDB                                                           57   4e-09
4Q14-A nrPDB                                                           49   1e-06
2H0E-A nrPDB                                                           40   3e-04
5Z5M-A nrPDB                                                           31   0.24 
2QTV-A nrPDB                                                           27   3.9  
5MRC-PP nrPDB                                                          27   4.1  
6O8B-A nrPDB                                                           26   5.2  
2FQX-A nrPDB                                                           26   7.0  

>1TFP-A nrPDB
          Length = 130

 Score =  269 bits (688), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 130/130 (100%), Positives = 130/130 (100%)

Query: 21  APLVSHGSVDSKCPLMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIHE 80
           APLVSHGSVDSKCPLMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIHE
Sbjct: 1   APLVSHGSVDSKCPLMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIHE 60

Query: 81  LTTEEQFVEGVYRVEFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYS 140
           LTTEEQFVEGVYRVEFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYS
Sbjct: 61  LTTEEQFVEGVYRVEFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYS 120

Query: 141 TTAVVSDPQE 150
           TTAVVSDPQE
Sbjct: 121 TTAVVSDPQE 130


>5E4A-A nrPDB
          Length = 137

 Score =  216 bits (549), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 104/139 (74%), Positives = 122/139 (87%), Gaps = 3/139 (2%)

Query: 11  LAGLVFLSEAAPLVSHGSVDSKCPLMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATG 70
           LAGLVF+SEA P    G+ +SKCPLMVKVLDAVRGSPA NVAV VF+KAAD TW+ FA+G
Sbjct: 2   LAGLVFVSEAGPT---GTGESKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASG 58

Query: 71  KTTEFGEIHELTTEEQFVEGVYRVEFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTI 130
           KT+E GE+H LTTEE+FVEG+Y+VE DT SYWK LG+SPFHE+A+VVFTANDSG R YTI
Sbjct: 59  KTSESGELHGLTTEEEFVEGIYKVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTI 118

Query: 131 AALLSPFSYSTTAVVSDPQ 149
           AALLSP+SYSTTAVV++P+
Sbjct: 119 AALLSPYSYSTTAVVTNPK 137


>1IE4-A nrPDB
          Length = 127

 Score =  213 bits (541), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 99/124 (79%), Positives = 112/124 (90%)

Query: 27  GSVDSKCPLMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIHELTTEEQ 86
           G+ +SKCPLMVKVLDAVRGSPA +VAVKVFKK ADG+W+ FA+GKT E GE+H LTT+E+
Sbjct: 4   GAGESKCPLMVKVLDAVRGSPAVDVAVKVFKKTADGSWEPFASGKTAESGELHGLTTDEK 63

Query: 87  FVEGVYRVEFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYSTTAVVS 146
           F EGVYRVE DT SYWK LG+SPFHEYA+VVFTANDSGHRHYTIAALLSP+SYSTTAVVS
Sbjct: 64  FTEGVYRVELDTKSYWKALGISPFHEYAEVVFTANDSGHRHYTIAALLSPYSYSTTAVVS 123

Query: 147 DPQE 150
           +PQ 
Sbjct: 124 NPQN 127


>5H0Z-A nrPDB
          Length = 126

 Score =  192 bits (487), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 90/118 (76%), Positives = 105/118 (88%)

Query: 33  CPLMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIHELTTEEQFVEGVY 92
            PLMVKVLDAVRGSPA NVAV VF+KAAD TW+ FA+GKT+E GE+H LTTEE+FVEG+Y
Sbjct: 9   SPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIY 68

Query: 93  RVEFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYSTTAVVSDPQE 150
           +VE DT SYWK LG+SPFHE+A+VVFTANDSG R YTIAALLS +SYSTTAVV++P+E
Sbjct: 69  KVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSAYSYSTTAVVTNPKE 126


>6GNM-A nrPDB
          Length = 135

 Score =  171 bits (434), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 81/129 (62%), Positives = 96/129 (74%)

Query: 22  PLVSHGSVDSKCPLMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIHEL 81
           P   HG  D++CPLMVK+LDAV+G+PA +VA+KV +K ADG W   ATG T   GEIH L
Sbjct: 7   PTDKHGGSDTRCPLMVKILDAVKGTPAGSVALKVSQKTADGGWTQIATGVTDATGEIHNL 66

Query: 82  TTEEQFVEGVYRVEFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYST 141
            TE+QF  GVYRVEFDT +YW   G +PFHE A+VVF A+  GHRHYT+A LLSPFSY+T
Sbjct: 67  ITEQQFPAGVYRVEFDTKAYWTNQGSTPFHEVAEVVFDAHPEGHRHYTLALLLSPFSYTT 126

Query: 142 TAVVSDPQE 150
           TAVVS   E
Sbjct: 127 TAVVSSVHE 135


>3IWU-A nrPDB
          Length = 138

 Score = 86.3 bits (212), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 63/110 (57%), Gaps = 2/110 (1%)

Query: 34  PLMVKVLDAVRGSPAANVAVKVFK-KAADGTWQDFATGKTTEFGEIHELTTEEQFVEGVY 92
           PL   VL+A +G P AN+ + + +       W    TG T + G    L T+E F+ GVY
Sbjct: 27  PLSTHVLNAAQGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGVY 86

Query: 93  RVEFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYSTT 142
           ++ F+T  YW  LG + F+ Y ++VFT  ++  +HY +  LLS FSYSTT
Sbjct: 87  KMRFETGKYWDALGETCFYPYVEIVFTITNTS-QHYHVPLLLSRFSYSTT 135


>2H6U-A nrPDB
          Length = 119

 Score = 82.8 bits (203), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 2/109 (1%)

Query: 34  PLMVKVLDAVRGSPAANVAVKVFK-KAADGTWQDFATGKTTEFGEIHELTTEEQFVEGVY 92
           PL   VL+  +G P AN+ + + +       W    TG T + G    L T+E F+ GVY
Sbjct: 8   PLSTHVLNIAQGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGVY 67

Query: 93  RVEFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYST 141
           ++ F+T  YW  LG + F+ Y ++VFT  ++  +HY +  LLS FSYST
Sbjct: 68  KMRFETGKYWDALGETCFYPYVEIVFTITNTS-QHYHVPLLLSRFSYST 115


>2G2N-A nrPDB
          Length = 114

 Score = 62.4 bits (150), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 53/107 (49%), Gaps = 2/107 (1%)

Query: 35  LMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIHELTTEEQFVEGVYRV 94
           L V +L+   G PAA+V V + KKA +G W    T KT + G I  L  E+    G YRV
Sbjct: 6   LSVHILNQQTGKPAADVTVTLEKKADNG-WLQLNTAKTDKDGRIKALWPEQTATTGDYRV 64

Query: 95  EFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYST 141
            F T  Y+K   L  F     V F  N   + HY +  LLS + YST
Sbjct: 65  VFKTGDYFKKQNLESFFPEIPVEFHINKV-NEHYHVPLLLSQYGYST 110


>2GPZ-A nrPDB
          Length = 111

 Score = 56.6 bits (135), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 50/107 (46%), Gaps = 2/107 (1%)

Query: 35  LMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIHELTTEEQFVEGVYRV 94
           L V +LD   G PA  V V V ++  D  W    TG T + G I  L  E+    G YRV
Sbjct: 3   LSVHILDQQTGKPAPGVEV-VLEQKKDNGWTQLNTGHTDQDGRIKALWPEKAAAPGDYRV 61

Query: 95  EFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYST 141
            F T  Y++   L  F     V F  + + + HY +  LLS + YST
Sbjct: 62  IFKTGQYFESKKLDTFFPEIPVEFHISKT-NEHYHVPLLLSQYGYST 107


>4Q14-A nrPDB
          Length = 139

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 8/117 (6%)

Query: 31  SKCPLMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIH-ELTTEEQFVE 89
           S   L   VLD   G+PAA + V++++ AA GT +      T   G     L + ++   
Sbjct: 21  SMGKLSTHVLDTAHGTPAAAMRVELYRIAASGTPELLKRVVTNLDGRTDAPLLSGDEMRT 80

Query: 90  GVYRVEFDTSSYWKGLGL----SPFHEYADVVF-TANDSGHRHYTIAALLSPFSYST 141
           G+Y ++F  + Y++G G      PF +   + F  A++ G+ H  +  L+SP+SYST
Sbjct: 81  GIYELQFHVAEYFEGRGAELAHEPFLDLIPIRFGIADEDGNYH--VPLLVSPWSYST 135


>2H0E-A nrPDB
          Length = 121

 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 10/111 (9%)

Query: 35  LMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIH-ELTTEEQFVEGVYR 93
           L   +LD   G PAANV + + K+  +   ++  T      G +   L   E+ + G Y 
Sbjct: 11  LTTHILDLTCGKPAANVKIGL-KRLGESIMKEVYTNND---GRVDVPLLAGEELMSGEYV 66

Query: 94  VEFDTSSYWKGLGLS----PFHEYADVVFTANDSGHRHYTIAALLSPFSYS 140
           +EF    Y+    ++    PF     V F   D    HY I  LLSPF Y 
Sbjct: 67  MEFHAGDYFASKNMNAADQPFLTIVTVRFQLADP-DAHYHIPLLLSPFGYQ 116


>5Z5M-A nrPDB
          Length = 299

 Score = 30.8 bits (68), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 8/119 (6%)

Query: 30  DSKCPLMVKVLDAVRGSPAANVAVKVFKKAAD---GTWQDFATGKTTEFGEIHELTTEEQ 86
           D++  L   VLD   G PA  + + + + +     G   +F T           L   ++
Sbjct: 178 DAQGFLTCHVLDTGNGCPAEKMRIHLHRLSPPEMAGLVGEFVTNDDGRLEGGPALKGGKE 237

Query: 87  FVEGVYRVEFDTSSYWKGLGL----SPFHEYADVVFTANDSGHRHYTIAALLSPFSYST 141
           F  G Y   F    Y+   G      PF +   + F   D+   HY +  L+SP+S+ST
Sbjct: 238 FTVGQYEWTFFCGEYFASKGTFTSGQPFLDTIPLRF-GIDNPDDHYHVPLLVSPWSFST 295


>2QTV-A nrPDB
          Length = 772

 Score = 26.9 bits (58), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 99  SSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAA 132
           +S WK   LSP+H YA     AN + + +  ++A
Sbjct: 446 TSTWKMASLSPYHSYAIFFEIANTAANSNPMMSA 479


>5MRC-PP nrPDB
          Length = 119

 Score = 26.6 bits (57), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 9/71 (12%)

Query: 44  RGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIHELTTEEQFVEGVY-----RVEFDT 98
           + SP  N+ V   +KA D    +        +  +    T+ +   GV      +++FD 
Sbjct: 15  KNSPVYNIVVANSRKARDAKPIEV----LGTYVPVPSPVTKRELKRGVVPIKDVKLDFDR 70

Query: 99  SSYWKGLGLSP 109
           + YW G+G  P
Sbjct: 71  TKYWIGVGAQP 81


>6O8B-A nrPDB
          Length = 665

 Score = 26.2 bits (56), Expect = 5.2,   Method: Composition-based stats.
 Identities = 11/19 (57%), Positives = 13/19 (68%)

Query: 71  KTTEFGEIHELTTEEQFVE 89
           K T+FG   EL  +EQFVE
Sbjct: 162 KLTDFGAARELEDDEQFVE 180


>2FQX-A nrPDB
          Length = 318

 Score = 25.8 bits (55), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 66  DFATGKTTEFGEIHELTTEEQFVEGVYRVEFDTSSYWKGLGLSPFHEY 113
           DF  G  T+ G+I + +  +Q  EG+ R   + ++  K +  S   EY
Sbjct: 4   DFVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNAKCKYVTASTDAEY 51


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

5E4A-A nrPDB                                                          209   3e-55
1TFP-A nrPDB                                                          202   5e-53
1IE4-A nrPDB                                                          191   7e-50
6GNM-A nrPDB                                                          186   4e-48
5H0Z-A nrPDB                                                          179   5e-46
3IWU-A nrPDB                                                          154   2e-38
2G2N-A nrPDB                                                          151   8e-38
2H6U-A nrPDB                                                          149   5e-37
2GPZ-A nrPDB                                                          147   1e-36
4Q14-A nrPDB                                                          132   7e-32
2H0E-A nrPDB                                                          124   1e-29

Sequences not found previously or not previously below threshold:

5Z5M-A nrPDB                                                           97   2e-21
3QVA-A nrPDB                                                           71   2e-13
1BY7-A nrPDB                                                           31   0.19 
4QL6-A nrPDB                                                           28   2.0  
5AHU-B nrPDB                                                           27   2.4  
5AEL-A nrPDB                                                           27   2.4  
5JOQ-A nrPDB                                                           27   2.4  
3H3K-A nrPDB                                                           27   4.1  
3K30-A nrPDB                                                           27   4.2  

>5E4A-A nrPDB
          Length = 137

 Score =  209 bits (532), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 104/139 (74%), Positives = 122/139 (87%), Gaps = 3/139 (2%)

Query: 11  LAGLVFLSEAAPLVSHGSVDSKCPLMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATG 70
           LAGLVF+SEA P    G+ +SKCPLMVKVLDAVRGSPA NVAV VF+KAAD TW+ FA+G
Sbjct: 2   LAGLVFVSEAGPT---GTGESKCPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASG 58

Query: 71  KTTEFGEIHELTTEEQFVEGVYRVEFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTI 130
           KT+E GE+H LTTEE+FVEG+Y+VE DT SYWK LG+SPFHE+A+VVFTANDSG R YTI
Sbjct: 59  KTSESGELHGLTTEEEFVEGIYKVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTI 118

Query: 131 AALLSPFSYSTTAVVSDPQ 149
           AALLSP+SYSTTAVV++P+
Sbjct: 119 AALLSPYSYSTTAVVTNPK 137


>1TFP-A nrPDB
          Length = 130

 Score =  202 bits (513), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 130/130 (100%), Positives = 130/130 (100%)

Query: 21  APLVSHGSVDSKCPLMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIHE 80
           APLVSHGSVDSKCPLMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIHE
Sbjct: 1   APLVSHGSVDSKCPLMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIHE 60

Query: 81  LTTEEQFVEGVYRVEFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYS 140
           LTTEEQFVEGVYRVEFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYS
Sbjct: 61  LTTEEQFVEGVYRVEFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYS 120

Query: 141 TTAVVSDPQE 150
           TTAVVSDPQE
Sbjct: 121 TTAVVSDPQE 130


>1IE4-A nrPDB
          Length = 127

 Score =  191 bits (486), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 99/124 (79%), Positives = 112/124 (90%)

Query: 27  GSVDSKCPLMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIHELTTEEQ 86
           G+ +SKCPLMVKVLDAVRGSPA +VAVKVFKK ADG+W+ FA+GKT E GE+H LTT+E+
Sbjct: 4   GAGESKCPLMVKVLDAVRGSPAVDVAVKVFKKTADGSWEPFASGKTAESGELHGLTTDEK 63

Query: 87  FVEGVYRVEFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYSTTAVVS 146
           F EGVYRVE DT SYWK LG+SPFHEYA+VVFTANDSGHRHYTIAALLSP+SYSTTAVVS
Sbjct: 64  FTEGVYRVELDTKSYWKALGISPFHEYAEVVFTANDSGHRHYTIAALLSPYSYSTTAVVS 123

Query: 147 DPQE 150
           +PQ 
Sbjct: 124 NPQN 127


>6GNM-A nrPDB
          Length = 135

 Score =  186 bits (471), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 81/129 (62%), Positives = 96/129 (74%)

Query: 22  PLVSHGSVDSKCPLMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIHEL 81
           P   HG  D++CPLMVK+LDAV+G+PA +VA+KV +K ADG W   ATG T   GEIH L
Sbjct: 7   PTDKHGGSDTRCPLMVKILDAVKGTPAGSVALKVSQKTADGGWTQIATGVTDATGEIHNL 66

Query: 82  TTEEQFVEGVYRVEFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYST 141
            TE+QF  GVYRVEFDT +YW   G +PFHE A+VVF A+  GHRHYT+A LLSPFSY+T
Sbjct: 67  ITEQQFPAGVYRVEFDTKAYWTNQGSTPFHEVAEVVFDAHPEGHRHYTLALLLSPFSYTT 126

Query: 142 TAVVSDPQE 150
           TAVVS   E
Sbjct: 127 TAVVSSVHE 135


>5H0Z-A nrPDB
          Length = 126

 Score =  179 bits (453), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 90/119 (75%), Positives = 105/119 (88%)

Query: 32  KCPLMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIHELTTEEQFVEGV 91
             PLMVKVLDAVRGSPA NVAV VF+KAAD TW+ FA+GKT+E GE+H LTTEE+FVEG+
Sbjct: 8   MSPLMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGI 67

Query: 92  YRVEFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYSTTAVVSDPQE 150
           Y+VE DT SYWK LG+SPFHE+A+VVFTANDSG R YTIAALLS +SYSTTAVV++P+E
Sbjct: 68  YKVEIDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSAYSYSTTAVVTNPKE 126


>3IWU-A nrPDB
          Length = 138

 Score =  154 bits (388), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 43/111 (38%), Positives = 63/111 (56%), Gaps = 2/111 (1%)

Query: 33  CPLMVKVLDAVRGSPAANVAVKVFK-KAADGTWQDFATGKTTEFGEIHELTTEEQFVEGV 91
            PL   VL+A +G P AN+ + + +       W    TG T + G    L T+E F+ GV
Sbjct: 26  SPLSTHVLNAAQGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGV 85

Query: 92  YRVEFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYSTT 142
           Y++ F+T  YW  LG + F+ Y ++VFT  ++  +HY +  LLS FSYSTT
Sbjct: 86  YKMRFETGKYWDALGETCFYPYVEIVFTITNTS-QHYHVPLLLSRFSYSTT 135


>2G2N-A nrPDB
          Length = 114

 Score =  151 bits (382), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 42/107 (39%), Positives = 52/107 (48%), Gaps = 2/107 (1%)

Query: 35  LMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIHELTTEEQFVEGVYRV 94
           L V +L+   G PAA+V V + KK AD  W    T KT + G I  L  E+    G YRV
Sbjct: 6   LSVHILNQQTGKPAADVTVTLEKK-ADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRV 64

Query: 95  EFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYST 141
            F T  Y+K   L  F     V F  N   + HY +  LLS + YST
Sbjct: 65  VFKTGDYFKKQNLESFFPEIPVEFHINKV-NEHYHVPLLLSQYGYST 110


>2H6U-A nrPDB
          Length = 119

 Score =  149 bits (375), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 2/110 (1%)

Query: 33  CPLMVKVLDAVRGSPAANVAVKVFK-KAADGTWQDFATGKTTEFGEIHELTTEEQFVEGV 91
            PL   VL+  +G P AN+ + + +       W    TG T + G    L T+E F+ GV
Sbjct: 7   SPLSTHVLNIAQGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGV 66

Query: 92  YRVEFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYST 141
           Y++ F+T  YW  LG + F+ Y ++VFT  ++  +HY +  LLS FSYST
Sbjct: 67  YKMRFETGKYWDALGETCFYPYVEIVFTITNTS-QHYHVPLLLSRFSYST 115


>2GPZ-A nrPDB
          Length = 111

 Score =  147 bits (372), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 38/107 (35%), Positives = 50/107 (46%), Gaps = 2/107 (1%)

Query: 35  LMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIHELTTEEQFVEGVYRV 94
           L V +LD   G PA  V V + +K  D  W    TG T + G I  L  E+    G YRV
Sbjct: 3   LSVHILDQQTGKPAPGVEVVLEQKK-DNGWTQLNTGHTDQDGRIKALWPEKAAAPGDYRV 61

Query: 95  EFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYST 141
            F T  Y++   L  F     V F  + + + HY +  LLS + YST
Sbjct: 62  IFKTGQYFESKKLDTFFPEIPVEFHISKT-NEHYHVPLLLSQYGYST 107


>4Q14-A nrPDB
          Length = 139

 Score =  132 bits (331), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 6/116 (5%)

Query: 31  SKCPLMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIH-ELTTEEQFVE 89
           S   L   VLD   G+PAA + V++++ AA GT +      T   G     L + ++   
Sbjct: 21  SMGKLSTHVLDTAHGTPAAAMRVELYRIAASGTPELLKRVVTNLDGRTDAPLLSGDEMRT 80

Query: 90  GVYRVEFDTSSYWKGLGL----SPFHEYADVVFTANDSGHRHYTIAALLSPFSYST 141
           G+Y ++F  + Y++G G      PF +   + F   D    +Y +  L+SP+SYST
Sbjct: 81  GIYELQFHVAEYFEGRGAELAHEPFLDLIPIRFGIADE-DGNYHVPLLVSPWSYST 135


>2H0E-A nrPDB
          Length = 121

 Score =  124 bits (311), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 10/114 (8%)

Query: 32  KCPLMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIH-ELTTEEQFVEG 90
              L   +LD   G PAANV + + K+  +   ++     T   G +   L   E+ + G
Sbjct: 8   MGKLTTHILDLTCGKPAANVKIGL-KRLGESIMKEVY---TNNDGRVDVPLLAGEELMSG 63

Query: 91  VYRVEFDTSSYWKGLGLS----PFHEYADVVFTANDSGHRHYTIAALLSPFSYS 140
            Y +EF    Y+    ++    PF     V F   D    HY I  LLSPF Y 
Sbjct: 64  EYVMEFHAGDYFASKNMNAADQPFLTIVTVRFQLADP-DAHYHIPLLLSPFGYQ 116


>5Z5M-A nrPDB
          Length = 299

 Score = 97.5 bits (241), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 8/126 (6%)

Query: 23  LVSHGSVDSKCPLMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEI---H 79
           L    + D++  L   VLD   G PA  + + + + +            T + G +    
Sbjct: 171 LSKIDTSDAQGFLTCHVLDTGNGCPAEKMRIHLHRLSPPEMAGLVGEFVTNDDGRLEGGP 230

Query: 80  ELTTEEQFVEGVYRVEFDTSSYWKGLGL----SPFHEYADVVFTANDSGHRHYTIAALLS 135
            L   ++F  G Y   F    Y+   G      PF +   + F  ++    HY +  L+S
Sbjct: 231 ALKGGKEFTVGQYEWTFFCGEYFASKGTFTSGQPFLDTIPLRFGIDNPDD-HYHVPLLVS 289

Query: 136 PFSYST 141
           P+S+ST
Sbjct: 290 PWSFST 295


>3QVA-A nrPDB
          Length = 116

 Score = 70.9 bits (172), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 6/110 (5%)

Query: 32  KCPLMVKVLDAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGEIHELTTEEQFVEGV 91
              L   +LD   G+PA  V V + ++      +  A   T   G I    +      G 
Sbjct: 9   MSTLSTHILDISTGTPAEGVTVSLSREG-----ETLANLVTNAQGRI-ATFSAAPLPAGR 62

Query: 92  YRVEFDTSSYWKGLGLSPFHEYADVVFTANDSGHRHYTIAALLSPFSYST 141
           Y +  +T +++   G       A + F   ++   H+ +  L++P  +ST
Sbjct: 63  YCLTAETGAWFARAGRESVFTRAQIDFVIGEAAEDHFHLPFLIAPGGWST 112


>1BY7-A nrPDB
          Length = 382

 Score = 31.2 bits (69), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 71  KTTEFGEIHELTTEEQFVEGVYRVEFDTSSYWKGLGLSPF 110
           KT   G+I  L  E   V+G  R+    + Y+KG   +PF
Sbjct: 141 KTQTKGKIPNLLPEGS-VDGDTRMVLVNAVYFKGKWKTPF 179


>4QL6-A nrPDB
          Length = 634

 Score = 27.8 bits (60), Expect = 2.0,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 17/23 (73%)

Query: 39  VLDAVRGSPAANVAVKVFKKAAD 61
           VLD++RGSP ++V + + ++  D
Sbjct: 289 VLDSLRGSPGSSVTLDIHRQNND 311


>5AHU-B nrPDB
          Length = 294

 Score = 27.4 bits (59), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 2   AFHSTLLVFLAGLVFLSEAAPLVSHGSVDSKCPLM 36
           A+++ LL  + GL+ +SEA P V  G  +    LM
Sbjct: 141 AYYTYLLPLVMGLI-VSEALPTVDMGVTEELAMLM 174


>5AEL-A nrPDB
          Length = 367

 Score = 27.4 bits (59), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 2   AFHSTLLVFLAGLVFLSEAAPLVSHGSVDSKCPLM 36
           A+++ LL  + GL+ +SEA P V  G  +    LM
Sbjct: 214 AYYTYLLPLVMGLI-VSEALPTVDMGVTEELAMLM 247


>5JOQ-A nrPDB
          Length = 290

 Score = 27.4 bits (59), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 4/61 (6%)

Query: 39  VLDAVRGSPAANVAVKVFKKAADGTWQDFATGKT----TEFGEIHELTTEEQFVEGVYRV 94
           +L A  G PA  V +   +   +  W+ F   K          +  +T      E +  +
Sbjct: 224 ILRAAHGMPAEVVKMFDEEFKTNDIWKHFDAVKNNRVYDLDENLFGMTASLNAPEALKEM 283

Query: 95  E 95
           E
Sbjct: 284 E 284


>3H3K-A nrPDB
          Length = 537

 Score = 26.6 bits (57), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 110 FHEYADVVFTANDSGHRHYTIAALLSPFSYSTTA 143
           +H+     F   D+         +LSP SY+ TA
Sbjct: 213 YHKVTTPSFPPLDTRPEDDDAPLVLSPISYAATA 246


>3K30-A nrPDB
          Length = 690

 Score = 26.6 bits (57), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 5/65 (7%)

Query: 23  LVSHGSV-DSKCPLMVKVL----DAVRGSPAANVAVKVFKKAADGTWQDFATGKTTEFGE 77
              +G   +++  L+ ++L    D   G  A    + V ++   G  ++   G   E GE
Sbjct: 196 TDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDGGITREDIEGVLRELGE 255

Query: 78  IHELT 82
           + +L 
Sbjct: 256 LPDLW 260


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.309    0.131    0.351 

Lambda     K      H
   0.267   0.0406    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,540,936
Number of Sequences: 36641
Number of extensions: 190092
Number of successful extensions: 502
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 441
Number of HSP's gapped (non-prelim): 43
length of query: 150
length of database: 10,336,785
effective HSP length: 88
effective length of query: 62
effective length of database: 7,112,377
effective search space: 440967374
effective search space used: 440967374
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 54 (25.4 bits)