BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P27352
         (417 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3KQ4-A nrPDB                                                          807   0.0  
4KKJ-A nrPDB                                                          183   1e-46
2BB6-A nrPDB                                                          102   3e-22
4ZRP-A nrPDB                                                           96   2e-20
2YXG-A nrPDB                                                           32   0.57 
5MQ0-T nrPDB                                                           30   2.6  
1G9T-A nrPDB                                                           29   3.7  
1Z2Z-A nrPDB                                                           28   5.9  
3HDB-A nrPDB                                                           28   9.4  

>3KQ4-A nrPDB
          Length = 393

 Score =  807 bits (2085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/393 (99%), Positives = 392/393 (99%)

Query: 25  SCSVPSAQEPLVNGIQVLMENSVTSSAYPNPSILIAMNLAGAYNLKAQKLLTYQLMSSDN 84
           SCSVPSAQEPLVNGIQVLMENSVTSSAYPNPSILIAMNLAGAYNLKAQKLLTYQLMSSDN
Sbjct: 1   SCSVPSAQEPLVNGIQVLMENSVTSSAYPNPSILIAMNLAGAYNLKAQKLLTYQLMSSDN 60

Query: 85  NDLTIGQLGLTIMALTSSCRDPGDKVSILQRQMENWAPSSPNAEASAFYGPSLAILALCQ 144
           NDLTIG LGLTIMALTSSCRDPGDKVSILQRQMENWAPSSPNAEASAFYGPSLAILALCQ
Sbjct: 61  NDLTIGHLGLTIMALTSSCRDPGDKVSILQRQMENWAPSSPNAEASAFYGPSLAILALCQ 120

Query: 145 KNSEATLPIAVRFAKTLLANSSPFNVDTGAMATLALTCMYNKIPVGSEEGYRSLFGQVLK 204
           KNSEATLPIAVRFAKTLLANSSPFNVDTGAMATLALTCMYNKIPVGSEEGYRSLFGQVLK
Sbjct: 121 KNSEATLPIAVRFAKTLLANSSPFNVDTGAMATLALTCMYNKIPVGSEEGYRSLFGQVLK 180

Query: 205 DIVEKISMKIKDNGIIGDIYSTGLAMQALSVTPEPSKKEWNCKKTTDMILNEIKQGKFHN 264
           DIVEKISMKIKDNGIIGDIYSTGLAMQALSVTPEPSKKEWNCKKTTDMILNEIKQGKFHN
Sbjct: 181 DIVEKISMKIKDNGIIGDIYSTGLAMQALSVTPEPSKKEWNCKKTTDMILNEIKQGKFHN 240

Query: 265 PMSIAQILPSLKGKTYLDVPQVTCSPDHEVQPTLPSNPGPGPTSASNITVIYTINNQLRG 324
           PMSIAQILPSLKGKTYLDVPQVTCSPDHEVQPTLPSNPGPGPTSASNITVIYTINNQLRG
Sbjct: 241 PMSIAQILPSLKGKTYLDVPQVTCSPDHEVQPTLPSNPGPGPTSASNITVIYTINNQLRG 300

Query: 325 VELLFNETINVSVKSGSVLLVVLEEAQRKNPMFKFETTMTSWGLVVSSINNIAENVNHKT 384
           VELLFNETINVSVKSGSVLLVVLEEAQRKNPMFKFETTMTSWGLVVSSINNIAENVNHKT
Sbjct: 301 VELLFNETINVSVKSGSVLLVVLEEAQRKNPMFKFETTMTSWGLVVSSINNIAENVNHKT 360

Query: 385 YWQFLSGVTPLNEGVADYIPFNHEHITANFTQY 417
           YWQFLSGVTPLNEGVADYIPFNHEHITANFTQY
Sbjct: 361 YWQFLSGVTPLNEGVADYIPFNHEHITANFTQY 393


>4KKJ-A nrPDB
          Length = 467

 Score =  183 bits (465), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/356 (35%), Positives = 192/356 (53%), Gaps = 35/356 (9%)

Query: 86  DLTIGQLGLTIMALTSSCRDPGDKV----SILQRQMENWAPSSPNAEA------SAFYGP 135
           D++ G+L L I+AL   CR+  + +     ++ +    +     N EA      + +Y  
Sbjct: 89  DVSSGELALIILAL-GVCRNAEENLIYDYHLIDKLENKFQAEIENMEAHNGTPLTNYYQL 147

Query: 136 SLAILALCQKNSEATLPIAVRFAKTLLAN---SSPFNVDTGAMATLALTCMYNKIPVG-- 190
           SL +LALC  N   +    V        N    S F+VDTGAMA LALTC+   +  G  
Sbjct: 148 SLDVLALCLFNGNYSTAEVVNHFTPENKNYYFGSQFSVDTGAMAVLALTCVKKSLINGQI 207

Query: 191 -SEEGYRSLFGQVLKDIVEKISMKIKDNGIIGDIYSTGLAMQALSVTPEP-SKKEWNCKK 248
            ++EG         K +VEKI  + K+NG+IG+ +STG AMQAL V+ +  ++ +WNC++
Sbjct: 208 KADEGSLKNISIYTKSLVEKILSEKKENGLIGNTFSTGEAMQALFVSSDYYNENDWNCQQ 267

Query: 249 TTDMILNEIKQGKFHNPMSIAQILPSLKGKTYLDVPQ----VTCSPDHEVQPTLPSNPGP 304
           T + +L EI QG F NP + AQ+LP+L GKT+LD+ +    V+ S +  +    P    P
Sbjct: 268 TLNTVLTEISQGAFSNPNAAAQVLPALMGKTFLDINKDSSCVSASGNFNISADEPITVTP 327

Query: 305 GPTSASNITVIYTINNQLRGVELLFNET--INVSVKSGSVLLVVLEEAQRKNP-MFKFET 361
            P S S I+V Y++           NET   NV+V +GSV L V+E+AQ+ N  +F F  
Sbjct: 328 -PDSQSYISVNYSVR---------INETYFTNVTVLNGSVFLSVMEKAQKMNDTIFGFTM 377

Query: 362 TMTSWGLVVSSINNIAENVNHKTYWQFLSGVTPLNEGVADYIPFNHEHITANFTQY 417
              SWG  ++ I  +  N N +TYW+ LSG  PL++G   Y+  N E++   +++Y
Sbjct: 378 EERSWGPYITCIQGLCANNNDRTYWELLSGGEPLSQGAGSYVVRNGENLEVRWSKY 433


>2BB6-A nrPDB
          Length = 414

 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 184/393 (46%), Gaps = 54/393 (13%)

Query: 54  NPSILIAMNL----AGA--------YNLKAQKLLTYQLMSSDNNDL----TIGQLGLTIM 97
           NPSI + + L    AGA          L  Q+ L     + D+ND     ++GQL L ++
Sbjct: 33  NPSIYVGLRLSSLQAGAKEAHYLHSLKLSYQQSLLRPASNKDDNDSEAKPSMGQLALYLL 92

Query: 98  ALTSSCR----DPGDK-VSILQRQMENWAPS----SPNAEASAFYGPSLAILALC--QKN 146
           AL ++C       GD+ VS L+R +E+   +          +++Y  SL ILALC  QK 
Sbjct: 93  ALRANCEFIGGRKGDRLVSQLKRFLEDEKRAIGHNHQGHPRTSYYQYSLGILALCVHQKR 152

Query: 147 SE----ATLPIAVRFAKTLLANSSPFNVDTGAMATLALTCMY--NKIPVGSEEGYRSLFG 200
                   L  AV     LL +    +VDT AMA +A +C+   N  P       R+   
Sbjct: 153 VHDSVVGKLLYAVEHKPHLLQDH--VSVDTMAMAGMAFSCLELSNLNP-----KQRNRIN 205

Query: 201 QVLKDIVEKISMKIKDNGIIGDIYSTGLAMQALSVTPEPSKKEWN-CKKTTDMILNEIKQ 259
             LK + EKI       G  G++YST LA+Q L  +  PS +    C K    +   ++ 
Sbjct: 206 LALKRVQEKILKAQTPEGYFGNVYSTPLALQLLMGSLRPSVELGTACLKAKAALQASLQH 265

Query: 260 GKFHNPMSIAQILPSLKGKTYLDVPQVTC-SPDHEVQPTLPSNPGPGPTSASNITVIYTI 318
             F NP+ I+Q+LP L  K+Y+D+    C +P   ++P L + P       + +     +
Sbjct: 266 KTFQNPLMISQLLPVLNQKSYVDLISPDCQAPRALLEPALETPP------QAKVPKFIDV 319

Query: 319 NNQLRGVELLFNETINVSVKSGSVLLVVLEEAQRKNPMFKFETTMTSWGLVVSSINNIAE 378
             ++ G+   +  +  VSV +GS L  +L+ AQ ++  F+F T  +  G  ++S+  +  
Sbjct: 320 LLKVSGISPSYRHS--VSVPAGSSLEDILKNAQ-EHGRFRFRTQASLSGPFLTSV--LGR 374

Query: 379 NVNHKTYWQFLSG-VTPLNEGVADYIPFNHEHI 410
               + +WQ L    TPL +G+ADY P + E I
Sbjct: 375 KAGEREFWQVLRDPDTPLQQGIADYRPKDGETI 407


>4ZRP-A nrPDB
          Length = 409

 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 181/427 (42%), Gaps = 55/427 (12%)

Query: 26  CSVPSAQEPLVN--GIQVLMENSVTSSAYPNPSILIAMNLAG------------AYNLKA 71
           C +P     LV   G  +L      S  + NPSI + + L+             +  L  
Sbjct: 3   CEIPEMDSHLVEKLGQHLLPWMDRLSLEHLNPSIYVGLRLSSLQAGTKEDLYLHSLKLGY 62

Query: 72  QKLLTYQLMSSDNNDL----TIGQLGLTIMALTSSCR----DPGDKVS-----ILQRQME 118
           Q+ L     S D+ D     ++GQL L ++AL ++C       GD++       L+ +  
Sbjct: 63  QQCLLGSAFSEDDGDCQGKPSMGQLALYLLALRANCEFVRGHKGDRLVSQLKWFLEDEKR 122

Query: 119 NWAPSSPNAEASAFYGPSLAILALCQKNSEATLPIAVRFAKTLLANSSPFN-----VDTG 173
                      +++Y   L ILALC         +       LL    PF+     VDT 
Sbjct: 123 AIGHDHKGHPHTSYYQYGLGILALCLHQKR----VHDSVVDKLLYAVEPFHQGHHSVDTA 178

Query: 174 AMATLALTCMYNKIPVGSEEGYRSLFGQVLKDIVEKISMKIKDNGIIGDIYSTGLAMQAL 233
           AMA LA TC+          G R      ++ + E+I       G  G++YST LA+Q L
Sbjct: 179 AMAGLAFTCLKRS---NFNPGRRQRITMAIRTVQEEILKAQTPEGHFGNVYSTPLALQFL 235

Query: 234 SVTP-EPSKKEWNCKKTTDMILNEIKQGKFHNPMSIAQILPSLKGKTYLDVPQVTC-SPD 291
             +P   ++    C K    +L  ++ G F N + I+Q+LP L  KTY+D+    C +P 
Sbjct: 236 MTSPMRGAELGTACLKARVALLASLQDGAFQNALMISQLLPVLNHKTYIDLIFPDCLAPR 295

Query: 292 HEVQPTLPSNPGPGPTSASNITVIYTINNQLRGVELLFNETINVSVKSGSVLLVVLEEAQ 351
             ++P   +     P +   I+V   +      + LL     ++SV +GS +  VL++A 
Sbjct: 296 VMLEPAAETI----PQTQEIISVTLQV------LSLLPPYRQSISVLAGSTVEDVLKKAH 345

Query: 352 RKNPMFKFETTMTSWGLVVSSINNIAENVNHKTYWQFLSGV-TPLNEGVADYIPFNHEHI 410
                F +ET  +  G  ++S+  + +    + +WQ L    TPL +G+ADY P + E I
Sbjct: 346 ELGG-FTYETQASLSGPYLTSV--MGKAAGEREFWQLLRDPNTPLLQGIADYRPKDGETI 402

Query: 411 TANFTQY 417
                 +
Sbjct: 403 ELRLVSW 409


>2YXG-A nrPDB
          Length = 289

 Score = 32.0 bits (71), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 3/41 (7%)

Query: 166 SPFNVDTGAMATLALTCMYNKIPVGSEEGYRSLFGQVLKDI 206
           S F  D GA A L++T  YNK    ++EG R  FG+V + I
Sbjct: 88  SVFAEDVGADAVLSITPYYNK---PTQEGLRKHFGKVAESI 125


>5MQ0-T nrPDB
          Length = 877

 Score = 29.6 bits (65), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 210 ISMKIKDNGIIGDIYSTGLAMQALSVTPEPSKKE 243
           IS +I +NG  GDI+S+ +  + L V P+  + E
Sbjct: 196 ISEEISENGSRGDIWSSHILERYLKVAPQQKRNE 229


>1G9T-A nrPDB
          Length = 182

 Score = 29.3 bits (64), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 292 HEVQPTLPSNPGPGPTSASNITVIYTINNQLRGVELLFNETINVSVKSGSVLLVVLEEAQ 351
           HEV     S+ G G ++  ++ ++  ++  +RG ++L  E I   + SG+ L  V E   
Sbjct: 64  HEVDFMTASSYGSGMSTTRDLKILKDLDEDIRGKDVLIVEDI---IDSGNTLSKVREILS 120

Query: 352 RKNP 355
            + P
Sbjct: 121 LREP 124


>1Z2Z-A nrPDB
          Length = 446

 Score = 28.5 bits (62), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 27/52 (51%)

Query: 203 LKDIVEKISMKIKDNGIIGDIYSTGLAMQALSVTPEPSKKEWNCKKTTDMIL 254
           LKDI  K+  + + +  +GD++     +   ++   P + E   KKTTD IL
Sbjct: 110 LKDIELKVLGRSRKSVELGDLWGNDFRITVRNIENSPEETEALLKKTTDEIL 161


>3HDB-A nrPDB
          Length = 417

 Score = 27.7 bits (60), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 221 GDIYSTGL-AMQALSVTPEPSKKEWNCK--KTTDMILNEIKQGKFHNPMSIAQILPSLKG 277
           G  Y  G   +   S++PEPSK   NC   +  D I+N   +   + P+    I P L G
Sbjct: 154 GYCYCGGYPCIMGPSISPEPSKFFSNCSYIQCWDFIMNHNPECIDNEPLGTDIISPPLCG 213

Query: 278 KTYLDVPQ 285
              L+V +
Sbjct: 214 NELLEVGE 221


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

3KQ4-A nrPDB                                                          616   e-177
4ZRP-A nrPDB                                                          481   e-136
2BB6-A nrPDB                                                          457   e-129
4KKJ-A nrPDB                                                          407   e-114

Sequences not found previously or not previously below threshold:

4WBG-A nrPDB                                                           35   0.067
4CCA-A nrPDB                                                           34   0.11 
1VJ7-A nrPDB                                                           32   0.63 
2CZC-A nrPDB                                                           32   0.67 
4DXB-A nrPDB                                                           31   0.99 
4OT9-A nrPDB                                                           30   1.9  


CONVERGED!
>3KQ4-A nrPDB
          Length = 393

 Score =  616 bits (1588), Expect = e-177,   Method: Composition-based stats.
 Identities = 392/393 (99%), Positives = 392/393 (99%)

Query: 25  SCSVPSAQEPLVNGIQVLMENSVTSSAYPNPSILIAMNLAGAYNLKAQKLLTYQLMSSDN 84
           SCSVPSAQEPLVNGIQVLMENSVTSSAYPNPSILIAMNLAGAYNLKAQKLLTYQLMSSDN
Sbjct: 1   SCSVPSAQEPLVNGIQVLMENSVTSSAYPNPSILIAMNLAGAYNLKAQKLLTYQLMSSDN 60

Query: 85  NDLTIGQLGLTIMALTSSCRDPGDKVSILQRQMENWAPSSPNAEASAFYGPSLAILALCQ 144
           NDLTIG LGLTIMALTSSCRDPGDKVSILQRQMENWAPSSPNAEASAFYGPSLAILALCQ
Sbjct: 61  NDLTIGHLGLTIMALTSSCRDPGDKVSILQRQMENWAPSSPNAEASAFYGPSLAILALCQ 120

Query: 145 KNSEATLPIAVRFAKTLLANSSPFNVDTGAMATLALTCMYNKIPVGSEEGYRSLFGQVLK 204
           KNSEATLPIAVRFAKTLLANSSPFNVDTGAMATLALTCMYNKIPVGSEEGYRSLFGQVLK
Sbjct: 121 KNSEATLPIAVRFAKTLLANSSPFNVDTGAMATLALTCMYNKIPVGSEEGYRSLFGQVLK 180

Query: 205 DIVEKISMKIKDNGIIGDIYSTGLAMQALSVTPEPSKKEWNCKKTTDMILNEIKQGKFHN 264
           DIVEKISMKIKDNGIIGDIYSTGLAMQALSVTPEPSKKEWNCKKTTDMILNEIKQGKFHN
Sbjct: 181 DIVEKISMKIKDNGIIGDIYSTGLAMQALSVTPEPSKKEWNCKKTTDMILNEIKQGKFHN 240

Query: 265 PMSIAQILPSLKGKTYLDVPQVTCSPDHEVQPTLPSNPGPGPTSASNITVIYTINNQLRG 324
           PMSIAQILPSLKGKTYLDVPQVTCSPDHEVQPTLPSNPGPGPTSASNITVIYTINNQLRG
Sbjct: 241 PMSIAQILPSLKGKTYLDVPQVTCSPDHEVQPTLPSNPGPGPTSASNITVIYTINNQLRG 300

Query: 325 VELLFNETINVSVKSGSVLLVVLEEAQRKNPMFKFETTMTSWGLVVSSINNIAENVNHKT 384
           VELLFNETINVSVKSGSVLLVVLEEAQRKNPMFKFETTMTSWGLVVSSINNIAENVNHKT
Sbjct: 301 VELLFNETINVSVKSGSVLLVVLEEAQRKNPMFKFETTMTSWGLVVSSINNIAENVNHKT 360

Query: 385 YWQFLSGVTPLNEGVADYIPFNHEHITANFTQY 417
           YWQFLSGVTPLNEGVADYIPFNHEHITANFTQY
Sbjct: 361 YWQFLSGVTPLNEGVADYIPFNHEHITANFTQY 393


>4ZRP-A nrPDB
          Length = 409

 Score =  481 bits (1238), Expect = e-136,   Method: Composition-based stats.
 Identities = 111/427 (25%), Positives = 181/427 (42%), Gaps = 55/427 (12%)

Query: 26  CSVPSAQEPLVN--GIQVLMENSVTSSAYPNPSILIAMNLAG------------AYNLKA 71
           C +P     LV   G  +L      S  + NPSI + + L+             +  L  
Sbjct: 3   CEIPEMDSHLVEKLGQHLLPWMDRLSLEHLNPSIYVGLRLSSLQAGTKEDLYLHSLKLGY 62

Query: 72  QKLLTYQLMSSDNNDL----TIGQLGLTIMALTSSCR----DPGDKVS-----ILQRQME 118
           Q+ L     S D+ D     ++GQL L ++AL ++C       GD++       L+ +  
Sbjct: 63  QQCLLGSAFSEDDGDCQGKPSMGQLALYLLALRANCEFVRGHKGDRLVSQLKWFLEDEKR 122

Query: 119 NWAPSSPNAEASAFYGPSLAILALCQKNSEATLPIAVRFAKTLLANSSPFN-----VDTG 173
                      +++Y   L ILALC         +       LL    PF+     VDT 
Sbjct: 123 AIGHDHKGHPHTSYYQYGLGILALCLHQKR----VHDSVVDKLLYAVEPFHQGHHSVDTA 178

Query: 174 AMATLALTCMYNKIPVGSEEGYRSLFGQVLKDIVEKISMKIKDNGIIGDIYSTGLAMQAL 233
           AMA LA TC+          G R      ++ + E+I       G  G++YST LA+Q L
Sbjct: 179 AMAGLAFTCLKRS---NFNPGRRQRITMAIRTVQEEILKAQTPEGHFGNVYSTPLALQFL 235

Query: 234 SVTP-EPSKKEWNCKKTTDMILNEIKQGKFHNPMSIAQILPSLKGKTYLDVPQVTC-SPD 291
             +P   ++    C K    +L  ++ G F N + I+Q+LP L  KTY+D+    C +P 
Sbjct: 236 MTSPMRGAELGTACLKARVALLASLQDGAFQNALMISQLLPVLNHKTYIDLIFPDCLAPR 295

Query: 292 HEVQPTLPSNPGPGPTSASNITVIYTINNQLRGVELLFNETINVSVKSGSVLLVVLEEAQ 351
             ++P   +     P +   I+V   +      + LL     ++SV +GS +  VL++A 
Sbjct: 296 VMLEPAAETI----PQTQEIISVTLQV------LSLLPPYRQSISVLAGSTVEDVLKKAH 345

Query: 352 RKNPMFKFETTMTSWGLVVSSINNIAENVNHKTYWQFLSGV-TPLNEGVADYIPFNHEHI 410
                F +ET  +  G  ++S+  + +    + +WQ L    TPL +G+ADY P + E I
Sbjct: 346 ELGG-FTYETQASLSGPYLTSV--MGKAAGEREFWQLLRDPNTPLLQGIADYRPKDGETI 402

Query: 411 TANFTQY 417
                 +
Sbjct: 403 ELRLVSW 409


>2BB6-A nrPDB
          Length = 414

 Score =  457 bits (1176), Expect = e-129,   Method: Composition-based stats.
 Identities = 111/428 (25%), Positives = 184/428 (42%), Gaps = 52/428 (12%)

Query: 26  CSVPSAQEPLVN--GIQVLMENSVTSSAYPNPSILIAMNLAG------------AYNLKA 71
           C +      LV   G ++L      S    NPSI + + L+             +  L  
Sbjct: 3   CEITEVDSTLVERLGQRLLPWMDRLSQEQLNPSIYVGLRLSSLQAGAKEAHYLHSLKLSY 62

Query: 72  QKLLTYQLMSSDNNDL----TIGQLGLTIMALTSSCR----DPGDKVS-----ILQRQME 118
           Q+ L     + D+ND     ++GQL L ++AL ++C       GD++       L+ +  
Sbjct: 63  QQSLLRPASNKDDNDSEAKPSMGQLALYLLALRANCEFIGGRKGDRLVSQLKRFLEDEKR 122

Query: 119 NWAPSSPNAEASAFYGPSLAILALCQKNSE------ATLPIAVRFAKTLLANSSPFNVDT 172
               +      +++Y  SL ILALC             L  AV     LL +    +VDT
Sbjct: 123 AIGHNHQGHPRTSYYQYSLGILALCVHQKRVHDSVVGKLLYAVEHKPHLLQDH--VSVDT 180

Query: 173 GAMATLALTCMYNKIPVGSEEGYRSLFGQVLKDIVEKISMKIKDNGIIGDIYSTGLAMQA 232
            AMA +A +C+            R+     LK + EKI       G  G++YST LA+Q 
Sbjct: 181 MAMAGMAFSCLELS---NLNPKQRNRINLALKRVQEKILKAQTPEGYFGNVYSTPLALQL 237

Query: 233 LSVTPEPS-KKEWNCKKTTDMILNEIKQGKFHNPMSIAQILPSLKGKTYLDVPQVTC-SP 290
           L  +  PS +    C K    +   ++   F NP+ I+Q+LP L  K+Y+D+    C +P
Sbjct: 238 LMGSLRPSVELGTACLKAKAALQASLQHKTFQNPLMISQLLPVLNQKSYVDLISPDCQAP 297

Query: 291 DHEVQPTLPSNPGPGPTSASNITVIYTINNQLRGVELLFNETINVSVKSGSVLLVVLEEA 350
              ++P L + P       + +     +  ++ G+   +  +  VSV +GS L  +L+ A
Sbjct: 298 RALLEPALETPP------QAKVPKFIDVLLKVSGISPSYRHS--VSVPAGSSLEDILKNA 349

Query: 351 QRKNPMFKFETTMTSWGLVVSSINNIAENVNHKTYWQFLSGV-TPLNEGVADYIPFNHEH 409
           Q  +  F+F T  +  G  ++S+  +      + +WQ L    TPL +G+ADY P + E 
Sbjct: 350 QE-HGRFRFRTQASLSGPFLTSV--LGRKAGEREFWQVLRDPDTPLQQGIADYRPKDGET 406

Query: 410 ITANFTQY 417
           I      +
Sbjct: 407 IELRLVGW 414


>4KKJ-A nrPDB
          Length = 467

 Score =  407 bits (1045), Expect = e-114,   Method: Composition-based stats.
 Identities = 137/425 (32%), Positives = 216/425 (50%), Gaps = 38/425 (8%)

Query: 20  TQTQSSCSVPSAQ----EPLVNGIQVLMENSVTSSAYPNPSI-LIAMNLAGAYNLKAQKL 74
           +Q    C V        +PL+N +     N  TS+     S+ L+ + +        Q+ 
Sbjct: 20  SQLCEICEVSEENYIRLKPLLNTMIQSNYNRGTSAVNVVLSLKLVGIQIQTLMQKMIQQ- 78

Query: 75  LTYQLMSSDNNDLTIGQLGLTIMALTSSCRDPGDKV----SILQRQMENWAPSSPNAEA- 129
           + Y + S   +D++ G+L L I+AL   CR+  + +     ++ +    +     N EA 
Sbjct: 79  IKYNVKSR-LSDVSSGELALIILAL-GVCRNAEENLIYDYHLIDKLENKFQAEIENMEAH 136

Query: 130 -----SAFYGPSLAILALCQKNSEATLPIAVRFAKTLLAN---SSPFNVDTGAMATLALT 181
                + +Y  SL +LALC  N   +    V        N    S F+VDTGAMA LALT
Sbjct: 137 NGTPLTNYYQLSLDVLALCLFNGNYSTAEVVNHFTPENKNYYFGSQFSVDTGAMAVLALT 196

Query: 182 CMYNKIPVG---SEEGYRSLFGQVLKDIVEKISMKIKDNGIIGDIYSTGLAMQALSVTPE 238
           C+   +  G   ++EG         K +VEKI  + K+NG+IG+ +STG AMQAL V+ +
Sbjct: 197 CVKKSLINGQIKADEGSLKNISIYTKSLVEKILSEKKENGLIGNTFSTGEAMQALFVSSD 256

Query: 239 P-SKKEWNCKKTTDMILNEIKQGKFHNPMSIAQILPSLKGKTYLDVPQ----VTCSPDHE 293
             ++ +WNC++T + +L EI QG F NP + AQ+LP+L GKT+LD+ +    V+ S +  
Sbjct: 257 YYNENDWNCQQTLNTVLTEISQGAFSNPNAAAQVLPALMGKTFLDINKDSSCVSASGNFN 316

Query: 294 VQPTLPSNPGPGPTSASNITVIYTINNQLRGVELLFNETINVSVKSGSVLLVVLEEAQRK 353
           +    P    P P S S I+V Y++               NV+V +GSV L V+E+AQ+ 
Sbjct: 317 ISADEPITVTP-PDSQSYISVNYSVRINET-------YFTNVTVLNGSVFLSVMEKAQKM 368

Query: 354 NP-MFKFETTMTSWGLVVSSINNIAENVNHKTYWQFLSGVTPLNEGVADYIPFNHEHITA 412
           N  +F F     SWG  ++ I  +  N N +TYW+ LSG  PL++G   Y+  N E++  
Sbjct: 369 NDTIFGFTMEERSWGPYITCIQGLCANNNDRTYWELLSGGEPLSQGAGSYVVRNGENLEV 428

Query: 413 NFTQY 417
            +++Y
Sbjct: 429 RWSKY 433


>4WBG-A nrPDB
          Length = 380

 Score = 34.8 bits (78), Expect = 0.067,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 68/211 (32%), Gaps = 15/211 (7%)

Query: 85  NDLTIGQLGLTIMA-LTSSCRDPGDKVSILQRQMENWAPSSPNAEASAFYGPSLAI---L 140
           + +T+G+L       L     +  D    ++     WAP         +  PS+ +   L
Sbjct: 124 DSITMGELATYSAGGLPLQFPEEVDSSEKMRAYYRQWAPVYSPGSHRQYSNPSIGLFGHL 183

Query: 141 ALCQKNSEATLPIAVRFAKTLLANSSPFNVDTGAMATLALTCMYNKIPVGSEEGYRSLFG 200
           A           +       L  + +  NV   AMA+ A        P+    G  +   
Sbjct: 184 AASSLKQPFAQLMEQTLLPGLGMHHTYVNVPKQAMASYAYGYSKEDKPIRVNPGMLADEA 243

Query: 201 QVLKDIVEKISMKIKDNGIIGDIYSTGLAMQALSVTPEPSKKEWNCKKTTDMILNEIKQG 260
             +K     +   +K N  IG +    L  QA+S+T +         +        +   
Sbjct: 244 YGIKTSSADLLAFVKAN--IGGVDDKALQ-QAISLTHKGHYSVGGMTQG-------LGWE 293

Query: 261 KFHNPMSIAQILPSLKGKTYLDVPQVTCSPD 291
            +  P++   +L     K  L+    T +P 
Sbjct: 294 SYAYPVTEQTLLAGNSAKVILEAN-PTAAPR 323


>4CCA-A nrPDB
          Length = 598

 Score = 34.0 bits (76), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 16/114 (14%)

Query: 308 SASNITVIYTINNQLRGVELLFNETI---NVSVKSGSVLLVVLEEAQRKNPMFKFETTMT 364
           S  N+  +    N      L+ N       V+   GS     LE  +R  P +     ++
Sbjct: 423 SEENLAKLIQHANVQAHSSLIRNLEQLGGTVTNPGGSGTSSRLEPRERMEPTY----QLS 478

Query: 365 SWGLVVSSI-NNIAENVNHKTYWQFLSGVTPLNEGVADYIPFNHEHITANFTQY 417
            W  V+  +  +  E+   +  W F+S   P     A         ++A F  +
Sbjct: 479 RWTPVIKDVMEDAVEDRLDRNLWPFVSDPAPTASSQAA--------VSARFGHW 524


>1VJ7-A nrPDB
          Length = 393

 Score = 31.7 bits (70), Expect = 0.63,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 22/57 (38%), Gaps = 1/57 (1%)

Query: 186 KIPVGSEEGYRSLFGQVLKDIVEKISMKIKDNGIIGDIYSTGLAMQALSVTPEPSKK 242
           KI     E  R     V  DIV KI     + G+ GD+Y     + ++       KK
Sbjct: 202 KISHMMNEKRREREALV-DDIVTKIKSYTTEQGLFGDVYGRPKHIYSIYRKMRDKKK 257


>2CZC-A nrPDB
          Length = 334

 Score = 31.7 bits (70), Expect = 0.67,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 28/81 (34%)

Query: 282 DVPQVTCSPDHEVQPTLPSNPGPGPTSASNITVIYTINNQLRGVELLFNETINVSVKSGS 341
           D       P + ++PT+      GP   + I +       +    L+   ++ V +K   
Sbjct: 170 DPNDTKRGPINAIKPTVEVPSHHGPDVQTVIPINIETMAFVVPTTLMHVHSVMVELKKPL 229

Query: 342 VLLVVLEEAQRKNPMFKFETT 362
               V++  +    +  FE  
Sbjct: 230 TKDDVIDIFENTTRVLLFEKE 250


>4DXB-A nrPDB
          Length = 637

 Score = 30.9 bits (68), Expect = 0.99,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 50/153 (32%), Gaps = 26/153 (16%)

Query: 85  NDLTIGQLGLTIMA----LTSSCRDPGDKVSILQRQMENWAPSSPNAEASAFYGPSLA-- 138
           +D T   L LT +     LT+   + GD V+ L R       + PN E       ++A  
Sbjct: 486 SDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATT 545

Query: 139 --------ILALCQKNSEATLPIAVRFAKTLLANSSPFNVDTGAMA-----------TLA 179
                   +L L  +        A + A  LL ++ P    T   A             A
Sbjct: 546 LRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGSATMENAQKGEIMPNIPQMSA 605

Query: 180 LTCMYNKIPVGSEEGYRSLFGQVLKDIVEKISM 212
                    + +  G R    + LKD   +I+ 
Sbjct: 606 FWYAVRTAVINAASG-RQTVDEALKDAQTRITK 637


>4OT9-A nrPDB
          Length = 359

 Score = 30.2 bits (66), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 19/114 (16%)

Query: 291 DHEVQPTLPSNPG--PGPTSASNITVIYTINNQLRGVELLFNETINVSVKSGSVLLVVLE 348
              +Q   P+ P     P       V   +  +         E +++ V SG+ +    E
Sbjct: 173 RALLQSGAPAVPQLLHMPDFEGLYPVHLAVRARS-------PECLDLLVDSGAEV----E 221

Query: 349 EAQRKNPM--FKFETTMTSWGLVVSSINNIAENVNHKTYWQFLSGVTPLNEGVA 400
             +R+         T M   GLV   +  +  NVN +T+    +G TPL+    
Sbjct: 222 ATERQGGRTALHLATEMEELGLVTHLVTKLRANVNARTF----AGNTPLHLAAG 271


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.305    0.122    0.310 

Lambda     K      H
   0.267   0.0379    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,445,530
Number of Sequences: 36641
Number of extensions: 467254
Number of successful extensions: 1384
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1328
Number of HSP's gapped (non-prelim): 21
length of query: 417
length of database: 10,336,785
effective HSP length: 100
effective length of query: 317
effective length of database: 6,672,685
effective search space: 2115241145
effective search space used: 2115241145
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 60 (27.8 bits)