BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P25785 (220 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1GXD-C nrPDB 403 e-113 1BUV-T nrPDB 374 e-104 2TMP-A nrPDB 261 2e-70 1UEA-B nrPDB 145 1e-35 3CKI-B nrPDB 124 2e-29 1D2B-A nrPDB 109 8e-25 6AMW-A nrPDB 33 0.11 2FO0-A nrPDB 32 0.19 2ZHY-A nrPDB 31 0.45 3SQ8-A nrPDB 28 2.3 1Q32-A nrPDB 28 2.4 3AHY-A nrPDB 27 4.9 5EXR-B nrPDB 27 6.7 >1GXD-C nrPDB Length = 194 Score = 403 bits (1036), Expect = e-113, Method: Compositional matrix adjust. Identities = 191/194 (98%), Positives = 193/194 (99%) Query: 27 CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDKDI 86 CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGP+KDI Sbjct: 1 CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPEKDI 60 Query: 87 EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQKKSLNH 146 EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLS TQKKSLNH Sbjct: 61 EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSTTQKKSLNH 120 Query: 147 RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKSINGHQAKFFACIKRSDGSCAWYRG 206 RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEK+INGHQAKFFACIKRSDGSCAWYRG Sbjct: 121 RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKNINGHQAKFFACIKRSDGSCAWYRG 180 Query: 207 AAPPKQEFLDIEDP 220 AAPPKQEFLDIEDP Sbjct: 181 AAPPKQEFLDIEDP 194 >1BUV-T nrPDB Length = 184 Score = 374 bits (959), Expect = e-104, Method: Compositional matrix adjust. Identities = 173/184 (94%), Positives = 182/184 (98%) Query: 27 CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDKDI 86 CSCSPVHPQQAFCNAD+VIRAKAV++KEVDSGNDIYGNPIKRIQYEIKQIKMFKGPD+DI Sbjct: 1 CSCSPVHPQQAFCNADIVIRAKAVNKKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDQDI 60 Query: 87 EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQKKSLNH 146 EFIYTAP++AVCGVSLD+GGKKEYLIAGKAEG+G MHITLCDFIVPWDTLS TQKKSLNH Sbjct: 61 EFIYTAPAAAVCGVSLDIGGKKEYLIAGKAEGNGNMHITLCDFIVPWDTLSATQKKSLNH 120 Query: 147 RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKSINGHQAKFFACIKRSDGSCAWYRG 206 RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEK+INGHQAKFFACIKRSDGSCAWYRG Sbjct: 121 RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKNINGHQAKFFACIKRSDGSCAWYRG 180 Query: 207 AAPP 210 AAPP Sbjct: 181 AAPP 184 >2TMP-A nrPDB Length = 127 Score = 261 bits (666), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 124/127 (97%), Positives = 125/127 (98%) Query: 27 CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDKDI 86 CSCSPVHPQQAFCNADVVIR KAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGP+KDI Sbjct: 1 CSCSPVHPQQAFCNADVVIRTKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPEKDI 60 Query: 87 EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQKKSLNH 146 EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLS TQKKSLNH Sbjct: 61 EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSTTQKKSLNH 120 Query: 147 RYQMGCE 153 RYQMGCE Sbjct: 121 RYQMGCE 127 >1UEA-B nrPDB Length = 184 Score = 145 bits (366), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 77/184 (41%), Positives = 105/184 (57%), Gaps = 15/184 (8%) Query: 27 CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDK-- 84 C+C P HPQ AFCN+D+VIRAK V EV + +Y +YEIK KM+KG Sbjct: 1 CTCVPPHPQTAFCNSDLVIRAKFVGTPEV-AQTTLYQ------RYEIKMTKMYKGFQALG 53 Query: 85 ---DIEFIYTAPSSAVCGVSLDVGGK-KEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQ 140 DI F+YT +VCG + +E+LIAGK + DG +HIT C F+ PW++LS+ Q Sbjct: 54 DAADIRFVYTPAMESVCGYFHRSHARSEEFLIAGKLQ-DGLLHITTCSFVAPWNSLSLAQ 112 Query: 141 KKSLNHRYQMGC-ECKITRCPMIPCYISSPDECLWMDWVTEKSINGHQAKFFACIKRSDG 199 ++ Y +GC EC + C IPC + S CLW D + + S G Q++ AC+ R G Sbjct: 113 RRGFTKTYTVGCEECTVFPCLSIPCKLQSGTHCLWTDQLLQGSEKGFQSRHLACLPREPG 172 Query: 200 SCAW 203 C W Sbjct: 173 LCTW 176 >3CKI-B nrPDB Length = 121 Score = 124 bits (312), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 59/129 (45%), Positives = 87/129 (67%), Gaps = 10/129 (7%) Query: 27 CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDK-- 84 C+CSP HPQ AFCN+D+VIRAK V +K V G P + Y IKQ+KM++G K Sbjct: 1 CTCSPSHPQDAFCNSDIVIRAKVVGKKLVKEG------PFGTLVYTIKQMKMYRGFTKMP 54 Query: 85 DIEFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQKKSL 144 +++I+T S ++CG+ L+V K +YL+ G+ DGKM+ LC+F+ WD L+++Q+K L Sbjct: 55 HVQYIHTEASESLCGLKLEV-NKYQYLLTGRVY-DGKMYTGLCNFVERWDQLTLSQRKGL 112 Query: 145 NHRYQMGCE 153 N+RY +GC Sbjct: 113 NYRYHLGCN 121 >1D2B-A nrPDB Length = 126 Score = 109 bits (273), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 58/133 (43%), Positives = 79/133 (59%), Gaps = 14/133 (10%) Query: 27 CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDK-- 84 C+C P HPQ AFCN+D+VIRAK V EV+ +Y +YEIK KM+KG Sbjct: 1 CTCVPPHPQTAFCNSDLVIRAKFVGTPEVNQ-TTLYQ------RYEIKMTKMYKGFQALG 53 Query: 85 ---DIEFIYTAPSSAVCGVSLDVGGK-KEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQ 140 DI F+YT +VCG + +E+LIAGK + DG +HIT C F+ PW++LS+ Q Sbjct: 54 DAADIRFVYTPAMESVCGYFHRSHNRSEEFLIAGKLQ-DGLLHITTCSFVAPWNSLSLAQ 112 Query: 141 KKSLNHRYQMGCE 153 ++ Y +GCE Sbjct: 113 RRGFTKTYTVGCE 125 >6AMW-A nrPDB Length = 255 Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Query: 108 KEYLIAGKAEGDGKMHITLCDFIVPWD-TLSITQKKSL 144 KE L+AG +E D + + L DF+ D TLSIT+ + L Sbjct: 70 KENLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKL 107 >2FO0-A nrPDB Length = 495 Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Query: 108 KEYLIAGKAEGDGKMHITLCDFIVPWD-TLSITQKKSL 144 KE L+AG +E D + + L DF+ D TLSIT+ + L Sbjct: 28 KENLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKL 65 >2ZHY-A nrPDB Length = 183 Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 20/41 (48%) Query: 175 MDWVTEKSINGHQAKFFACIKRSDGSCAWYRGAAPPKQEFL 215 D E I GH A A + R DG A Y G PP +EF+ Sbjct: 70 FDLGGELCIPGHAAITDAHLARLDGWLAHYNGQLPPLEEFI 110 >3SQ8-A nrPDB Length = 470 Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust. Identities = 14/43 (32%), Positives = 19/43 (44%) Query: 81 GPDKDIEFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMH 123 P ++EF+Y+ PS L K E L AG + D H Sbjct: 186 APLSELEFVYSTPSKFQSSGLLSFYNKLEKLSAGTSASDTAKH 228 >1Q32-A nrPDB Length = 544 Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust. Identities = 14/43 (32%), Positives = 19/43 (44%) Query: 81 GPDKDIEFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMH 123 P ++EF+Y+ PS L K E L AG + D H Sbjct: 263 APLSELEFVYSTPSKFQSSGLLSFYNKLEKLSAGTSASDTAKH 305 >3AHY-A nrPDB Length = 473 Score = 27.3 bits (59), Expect = 4.9, Method: Compositional matrix adjust. Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%) Query: 116 AEGDGKMHITL-CDFIVPWDTLSITQKKSLNHRYQM 150 A GDG++ I L DF PWD K++ R + Sbjct: 221 ASGDGQIGIVLNGDFTYPWDAADPADKEAAERRLEF 256 >5EXR-B nrPDB Length = 509 Score = 26.9 bits (58), Expect = 6.7, Method: Compositional matrix adjust. Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 10/48 (20%) Query: 20 LVRPADACSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIK 67 ++ D C S HP Q FC S++ ++ G DI PI+ Sbjct: 430 MIHNVDDCGFSLNHPNQFFCE----------SQRILNGGKDIKKEPIQ 467 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1GXD-C nrPDB 367 e-102 1BUV-T nrPDB 342 1e-94 1UEA-B nrPDB 258 2e-69 2TMP-A nrPDB 232 8e-62 1D2B-A nrPDB 183 5e-47 3CKI-B nrPDB 180 4e-46 Sequences not found previously or not previously below threshold: 5L25-A nrPDB 30 0.92 6AMW-A nrPDB 29 1.2 2FO0-A nrPDB 29 1.2 2ZHY-A nrPDB 29 2.6 3J9W-AH nrPDB 27 5.5 4N13-A nrPDB 27 8.0 CONVERGED! >1GXD-C nrPDB Length = 194 Score = 367 bits (942), Expect = e-102, Method: Composition-based stats. Identities = 191/194 (98%), Positives = 193/194 (99%) Query: 27 CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDKDI 86 CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGP+KDI Sbjct: 1 CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPEKDI 60 Query: 87 EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQKKSLNH 146 EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLS TQKKSLNH Sbjct: 61 EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSTTQKKSLNH 120 Query: 147 RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKSINGHQAKFFACIKRSDGSCAWYRG 206 RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEK+INGHQAKFFACIKRSDGSCAWYRG Sbjct: 121 RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKNINGHQAKFFACIKRSDGSCAWYRG 180 Query: 207 AAPPKQEFLDIEDP 220 AAPPKQEFLDIEDP Sbjct: 181 AAPPKQEFLDIEDP 194 >1BUV-T nrPDB Length = 184 Score = 342 bits (876), Expect = 1e-94, Method: Composition-based stats. Identities = 173/184 (94%), Positives = 182/184 (98%) Query: 27 CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDKDI 86 CSCSPVHPQQAFCNAD+VIRAKAV++KEVDSGNDIYGNPIKRIQYEIKQIKMFKGPD+DI Sbjct: 1 CSCSPVHPQQAFCNADIVIRAKAVNKKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDQDI 60 Query: 87 EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQKKSLNH 146 EFIYTAP++AVCGVSLD+GGKKEYLIAGKAEG+G MHITLCDFIVPWDTLS TQKKSLNH Sbjct: 61 EFIYTAPAAAVCGVSLDIGGKKEYLIAGKAEGNGNMHITLCDFIVPWDTLSATQKKSLNH 120 Query: 147 RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKSINGHQAKFFACIKRSDGSCAWYRG 206 RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEK+INGHQAKFFACIKRSDGSCAWYRG Sbjct: 121 RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKNINGHQAKFFACIKRSDGSCAWYRG 180 Query: 207 AAPP 210 AAPP Sbjct: 181 AAPP 184 >1UEA-B nrPDB Length = 184 Score = 258 bits (658), Expect = 2e-69, Method: Composition-based stats. Identities = 77/184 (41%), Positives = 105/184 (57%), Gaps = 15/184 (8%) Query: 27 CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDK-- 84 C+C P HPQ AFCN+D+VIRAK V EV + +Y +YEIK KM+KG Sbjct: 1 CTCVPPHPQTAFCNSDLVIRAKFVGTPEV-AQTTLYQ------RYEIKMTKMYKGFQALG 53 Query: 85 ---DIEFIYTAPSSAVCGVSLDVGGK-KEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQ 140 DI F+YT +VCG + +E+LIAGK + DG +HIT C F+ PW++LS+ Q Sbjct: 54 DAADIRFVYTPAMESVCGYFHRSHARSEEFLIAGKLQ-DGLLHITTCSFVAPWNSLSLAQ 112 Query: 141 KKSLNHRYQMGC-ECKITRCPMIPCYISSPDECLWMDWVTEKSINGHQAKFFACIKRSDG 199 ++ Y +GC EC + C IPC + S CLW D + + S G Q++ AC+ R G Sbjct: 113 RRGFTKTYTVGCEECTVFPCLSIPCKLQSGTHCLWTDQLLQGSEKGFQSRHLACLPREPG 172 Query: 200 SCAW 203 C W Sbjct: 173 LCTW 176 >2TMP-A nrPDB Length = 127 Score = 232 bits (592), Expect = 8e-62, Method: Composition-based stats. Identities = 124/127 (97%), Positives = 125/127 (98%) Query: 27 CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDKDI 86 CSCSPVHPQQAFCNADVVIR KAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGP+KDI Sbjct: 1 CSCSPVHPQQAFCNADVVIRTKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPEKDI 60 Query: 87 EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQKKSLNH 146 EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLS TQKKSLNH Sbjct: 61 EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSTTQKKSLNH 120 Query: 147 RYQMGCE 153 RYQMGCE Sbjct: 121 RYQMGCE 127 >1D2B-A nrPDB Length = 126 Score = 183 bits (465), Expect = 5e-47, Method: Composition-based stats. Identities = 58/133 (43%), Positives = 79/133 (59%), Gaps = 14/133 (10%) Query: 27 CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDK-- 84 C+C P HPQ AFCN+D+VIRAK V EV+ +Y +YEIK KM+KG Sbjct: 1 CTCVPPHPQTAFCNSDLVIRAKFVGTPEVNQ-TTLYQ------RYEIKMTKMYKGFQALG 53 Query: 85 ---DIEFIYTAPSSAVCGVSLDVGGK-KEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQ 140 DI F+YT +VCG + +E+LIAGK + DG +HIT C F+ PW++LS+ Q Sbjct: 54 DAADIRFVYTPAMESVCGYFHRSHNRSEEFLIAGKLQ-DGLLHITTCSFVAPWNSLSLAQ 112 Query: 141 KKSLNHRYQMGCE 153 ++ Y +GCE Sbjct: 113 RRGFTKTYTVGCE 125 >3CKI-B nrPDB Length = 121 Score = 180 bits (457), Expect = 4e-46, Method: Composition-based stats. Identities = 59/129 (45%), Positives = 87/129 (67%), Gaps = 10/129 (7%) Query: 27 CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDK-- 84 C+CSP HPQ AFCN+D+VIRAK V +K V G P + Y IKQ+KM++G K Sbjct: 1 CTCSPSHPQDAFCNSDIVIRAKVVGKKLVKEG------PFGTLVYTIKQMKMYRGFTKMP 54 Query: 85 DIEFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQKKSL 144 +++I+T S ++CG+ L+V K +YL+ G+ DGKM+ LC+F+ WD L+++Q+K L Sbjct: 55 HVQYIHTEASESLCGLKLEV-NKYQYLLTGRVY-DGKMYTGLCNFVERWDQLTLSQRKGL 112 Query: 145 NHRYQMGCE 153 N+RY +GC Sbjct: 113 NYRYHLGCN 121 >5L25-A nrPDB Length = 652 Score = 29.7 bits (65), Expect = 0.92, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 22/41 (53%) Query: 89 IYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDF 129 + T S+A+CG+ + G + LI G AE M+ + +F Sbjct: 69 VQTLASTAICGMIHSIIGGQPLLILGVAEPTVIMYTFMFNF 109 >6AMW-A nrPDB Length = 255 Score = 29.3 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Query: 106 GKKEYLIAGKAEGDGKMHITLCDFIVPWD-TLSITQKKSL 144 KE L+AG +E D + + L DF+ D TLSIT+ + L Sbjct: 68 NSKENLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKL 107 >2FO0-A nrPDB Length = 495 Score = 29.3 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Query: 106 GKKEYLIAGKAEGDGKMHITLCDFIVPWD-TLSITQKKSL 144 KE L+AG +E D + + L DF+ D TLSIT+ + L Sbjct: 26 NSKENLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKL 65 >2ZHY-A nrPDB Length = 183 Score = 28.5 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 15/33 (45%), Positives = 18/33 (54%) Query: 183 INGHQAKFFACIKRSDGSCAWYRGAAPPKQEFL 215 I GH A A + R DG A Y G PP +EF+ Sbjct: 78 IPGHAAITDAHLARLDGWLAHYNGQLPPLEEFI 110 >3J9W-AH nrPDB Length = 132 Score = 27.3 bits (59), Expect = 5.5, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Query: 65 PIKRIQYEIKQIKMFKGPDKDIEFIYTAPSSAVCGVSLDVGGKKEYLIAG 114 P +++ EI +I +G +D+EF+ + V L G E +I G Sbjct: 28 PASKLKREIAEILKREGFIRDVEFV-EDSKQGIIRVFLKYGQNNERVITG 76 >4N13-A nrPDB Length = 265 Score = 26.6 bits (57), Expect = 8.0, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 18/41 (43%) Query: 49 AVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDKDIEFI 89 ++ E+ N N K + EI+ K GPD I FI Sbjct: 91 FITSPEIKITNITEENLAKILNGEIQNWKQVGGPDAKINFI 131 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.315 0.133 0.421 Lambda K H 0.267 0.0414 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,805,378 Number of Sequences: 36641 Number of extensions: 343808 Number of successful extensions: 685 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 646 Number of HSP's gapped (non-prelim): 26 length of query: 220 length of database: 10,336,785 effective HSP length: 93 effective length of query: 127 effective length of database: 6,929,172 effective search space: 880004844 effective search space used: 880004844 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 57 (26.6 bits)