BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P25785
         (220 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

1GXD-C nrPDB                                                          403   e-113
1BUV-T nrPDB                                                          374   e-104
2TMP-A nrPDB                                                          261   2e-70
1UEA-B nrPDB                                                          145   1e-35
3CKI-B nrPDB                                                          124   2e-29
1D2B-A nrPDB                                                          109   8e-25
6AMW-A nrPDB                                                           33   0.11 
2FO0-A nrPDB                                                           32   0.19 
2ZHY-A nrPDB                                                           31   0.45 
3SQ8-A nrPDB                                                           28   2.3  
1Q32-A nrPDB                                                           28   2.4  
3AHY-A nrPDB                                                           27   4.9  
5EXR-B nrPDB                                                           27   6.7  

>1GXD-C nrPDB
          Length = 194

 Score =  403 bits (1036), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 191/194 (98%), Positives = 193/194 (99%)

Query: 27  CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDKDI 86
           CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGP+KDI
Sbjct: 1   CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPEKDI 60

Query: 87  EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQKKSLNH 146
           EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLS TQKKSLNH
Sbjct: 61  EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSTTQKKSLNH 120

Query: 147 RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKSINGHQAKFFACIKRSDGSCAWYRG 206
           RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEK+INGHQAKFFACIKRSDGSCAWYRG
Sbjct: 121 RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKNINGHQAKFFACIKRSDGSCAWYRG 180

Query: 207 AAPPKQEFLDIEDP 220
           AAPPKQEFLDIEDP
Sbjct: 181 AAPPKQEFLDIEDP 194


>1BUV-T nrPDB
          Length = 184

 Score =  374 bits (959), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 173/184 (94%), Positives = 182/184 (98%)

Query: 27  CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDKDI 86
           CSCSPVHPQQAFCNAD+VIRAKAV++KEVDSGNDIYGNPIKRIQYEIKQIKMFKGPD+DI
Sbjct: 1   CSCSPVHPQQAFCNADIVIRAKAVNKKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDQDI 60

Query: 87  EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQKKSLNH 146
           EFIYTAP++AVCGVSLD+GGKKEYLIAGKAEG+G MHITLCDFIVPWDTLS TQKKSLNH
Sbjct: 61  EFIYTAPAAAVCGVSLDIGGKKEYLIAGKAEGNGNMHITLCDFIVPWDTLSATQKKSLNH 120

Query: 147 RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKSINGHQAKFFACIKRSDGSCAWYRG 206
           RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEK+INGHQAKFFACIKRSDGSCAWYRG
Sbjct: 121 RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKNINGHQAKFFACIKRSDGSCAWYRG 180

Query: 207 AAPP 210
           AAPP
Sbjct: 181 AAPP 184


>2TMP-A nrPDB
          Length = 127

 Score =  261 bits (666), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 124/127 (97%), Positives = 125/127 (98%)

Query: 27  CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDKDI 86
           CSCSPVHPQQAFCNADVVIR KAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGP+KDI
Sbjct: 1   CSCSPVHPQQAFCNADVVIRTKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPEKDI 60

Query: 87  EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQKKSLNH 146
           EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLS TQKKSLNH
Sbjct: 61  EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSTTQKKSLNH 120

Query: 147 RYQMGCE 153
           RYQMGCE
Sbjct: 121 RYQMGCE 127


>1UEA-B nrPDB
          Length = 184

 Score =  145 bits (366), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 77/184 (41%), Positives = 105/184 (57%), Gaps = 15/184 (8%)

Query: 27  CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDK-- 84
           C+C P HPQ AFCN+D+VIRAK V   EV +   +Y       +YEIK  KM+KG     
Sbjct: 1   CTCVPPHPQTAFCNSDLVIRAKFVGTPEV-AQTTLYQ------RYEIKMTKMYKGFQALG 53

Query: 85  ---DIEFIYTAPSSAVCGVSLDVGGK-KEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQ 140
              DI F+YT    +VCG       + +E+LIAGK + DG +HIT C F+ PW++LS+ Q
Sbjct: 54  DAADIRFVYTPAMESVCGYFHRSHARSEEFLIAGKLQ-DGLLHITTCSFVAPWNSLSLAQ 112

Query: 141 KKSLNHRYQMGC-ECKITRCPMIPCYISSPDECLWMDWVTEKSINGHQAKFFACIKRSDG 199
           ++     Y +GC EC +  C  IPC + S   CLW D + + S  G Q++  AC+ R  G
Sbjct: 113 RRGFTKTYTVGCEECTVFPCLSIPCKLQSGTHCLWTDQLLQGSEKGFQSRHLACLPREPG 172

Query: 200 SCAW 203
            C W
Sbjct: 173 LCTW 176


>3CKI-B nrPDB
          Length = 121

 Score =  124 bits (312), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 59/129 (45%), Positives = 87/129 (67%), Gaps = 10/129 (7%)

Query: 27  CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDK-- 84
           C+CSP HPQ AFCN+D+VIRAK V +K V  G      P   + Y IKQ+KM++G  K  
Sbjct: 1   CTCSPSHPQDAFCNSDIVIRAKVVGKKLVKEG------PFGTLVYTIKQMKMYRGFTKMP 54

Query: 85  DIEFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQKKSL 144
            +++I+T  S ++CG+ L+V  K +YL+ G+   DGKM+  LC+F+  WD L+++Q+K L
Sbjct: 55  HVQYIHTEASESLCGLKLEV-NKYQYLLTGRVY-DGKMYTGLCNFVERWDQLTLSQRKGL 112

Query: 145 NHRYQMGCE 153
           N+RY +GC 
Sbjct: 113 NYRYHLGCN 121


>1D2B-A nrPDB
          Length = 126

 Score =  109 bits (273), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 58/133 (43%), Positives = 79/133 (59%), Gaps = 14/133 (10%)

Query: 27  CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDK-- 84
           C+C P HPQ AFCN+D+VIRAK V   EV+    +Y       +YEIK  KM+KG     
Sbjct: 1   CTCVPPHPQTAFCNSDLVIRAKFVGTPEVNQ-TTLYQ------RYEIKMTKMYKGFQALG 53

Query: 85  ---DIEFIYTAPSSAVCGVSLDVGGK-KEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQ 140
              DI F+YT    +VCG       + +E+LIAGK + DG +HIT C F+ PW++LS+ Q
Sbjct: 54  DAADIRFVYTPAMESVCGYFHRSHNRSEEFLIAGKLQ-DGLLHITTCSFVAPWNSLSLAQ 112

Query: 141 KKSLNHRYQMGCE 153
           ++     Y +GCE
Sbjct: 113 RRGFTKTYTVGCE 125


>6AMW-A nrPDB
          Length = 255

 Score = 32.7 bits (73), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 108 KEYLIAGKAEGDGKMHITLCDFIVPWD-TLSITQKKSL 144
           KE L+AG +E D  + + L DF+   D TLSIT+ + L
Sbjct: 70  KENLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKL 107


>2FO0-A nrPDB
          Length = 495

 Score = 32.0 bits (71), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 108 KEYLIAGKAEGDGKMHITLCDFIVPWD-TLSITQKKSL 144
           KE L+AG +E D  + + L DF+   D TLSIT+ + L
Sbjct: 28  KENLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKL 65


>2ZHY-A nrPDB
          Length = 183

 Score = 30.8 bits (68), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 20/41 (48%)

Query: 175 MDWVTEKSINGHQAKFFACIKRSDGSCAWYRGAAPPKQEFL 215
            D   E  I GH A   A + R DG  A Y G  PP +EF+
Sbjct: 70  FDLGGELCIPGHAAITDAHLARLDGWLAHYNGQLPPLEEFI 110


>3SQ8-A nrPDB
          Length = 470

 Score = 28.5 bits (62), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 81  GPDKDIEFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMH 123
            P  ++EF+Y+ PS       L    K E L AG +  D   H
Sbjct: 186 APLSELEFVYSTPSKFQSSGLLSFYNKLEKLSAGTSASDTAKH 228


>1Q32-A nrPDB
          Length = 544

 Score = 28.5 bits (62), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 81  GPDKDIEFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMH 123
            P  ++EF+Y+ PS       L    K E L AG +  D   H
Sbjct: 263 APLSELEFVYSTPSKFQSSGLLSFYNKLEKLSAGTSASDTAKH 305


>3AHY-A nrPDB
          Length = 473

 Score = 27.3 bits (59), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 116 AEGDGKMHITL-CDFIVPWDTLSITQKKSLNHRYQM 150
           A GDG++ I L  DF  PWD      K++   R + 
Sbjct: 221 ASGDGQIGIVLNGDFTYPWDAADPADKEAAERRLEF 256


>5EXR-B nrPDB
          Length = 509

 Score = 26.9 bits (58), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 10/48 (20%)

Query: 20  LVRPADACSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIK 67
           ++   D C  S  HP Q FC           S++ ++ G DI   PI+
Sbjct: 430 MIHNVDDCGFSLNHPNQFFCE----------SQRILNGGKDIKKEPIQ 467


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

1GXD-C nrPDB                                                          367   e-102
1BUV-T nrPDB                                                          342   1e-94
1UEA-B nrPDB                                                          258   2e-69
2TMP-A nrPDB                                                          232   8e-62
1D2B-A nrPDB                                                          183   5e-47
3CKI-B nrPDB                                                          180   4e-46

Sequences not found previously or not previously below threshold:

5L25-A nrPDB                                                           30   0.92 
6AMW-A nrPDB                                                           29   1.2  
2FO0-A nrPDB                                                           29   1.2  
2ZHY-A nrPDB                                                           29   2.6  
3J9W-AH nrPDB                                                          27   5.5  
4N13-A nrPDB                                                           27   8.0  


CONVERGED!
>1GXD-C nrPDB
          Length = 194

 Score =  367 bits (942), Expect = e-102,   Method: Composition-based stats.
 Identities = 191/194 (98%), Positives = 193/194 (99%)

Query: 27  CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDKDI 86
           CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGP+KDI
Sbjct: 1   CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPEKDI 60

Query: 87  EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQKKSLNH 146
           EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLS TQKKSLNH
Sbjct: 61  EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSTTQKKSLNH 120

Query: 147 RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKSINGHQAKFFACIKRSDGSCAWYRG 206
           RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEK+INGHQAKFFACIKRSDGSCAWYRG
Sbjct: 121 RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKNINGHQAKFFACIKRSDGSCAWYRG 180

Query: 207 AAPPKQEFLDIEDP 220
           AAPPKQEFLDIEDP
Sbjct: 181 AAPPKQEFLDIEDP 194


>1BUV-T nrPDB
          Length = 184

 Score =  342 bits (876), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 173/184 (94%), Positives = 182/184 (98%)

Query: 27  CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDKDI 86
           CSCSPVHPQQAFCNAD+VIRAKAV++KEVDSGNDIYGNPIKRIQYEIKQIKMFKGPD+DI
Sbjct: 1   CSCSPVHPQQAFCNADIVIRAKAVNKKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDQDI 60

Query: 87  EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQKKSLNH 146
           EFIYTAP++AVCGVSLD+GGKKEYLIAGKAEG+G MHITLCDFIVPWDTLS TQKKSLNH
Sbjct: 61  EFIYTAPAAAVCGVSLDIGGKKEYLIAGKAEGNGNMHITLCDFIVPWDTLSATQKKSLNH 120

Query: 147 RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKSINGHQAKFFACIKRSDGSCAWYRG 206
           RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEK+INGHQAKFFACIKRSDGSCAWYRG
Sbjct: 121 RYQMGCECKITRCPMIPCYISSPDECLWMDWVTEKNINGHQAKFFACIKRSDGSCAWYRG 180

Query: 207 AAPP 210
           AAPP
Sbjct: 181 AAPP 184


>1UEA-B nrPDB
          Length = 184

 Score =  258 bits (658), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 77/184 (41%), Positives = 105/184 (57%), Gaps = 15/184 (8%)

Query: 27  CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDK-- 84
           C+C P HPQ AFCN+D+VIRAK V   EV +   +Y       +YEIK  KM+KG     
Sbjct: 1   CTCVPPHPQTAFCNSDLVIRAKFVGTPEV-AQTTLYQ------RYEIKMTKMYKGFQALG 53

Query: 85  ---DIEFIYTAPSSAVCGVSLDVGGK-KEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQ 140
              DI F+YT    +VCG       + +E+LIAGK + DG +HIT C F+ PW++LS+ Q
Sbjct: 54  DAADIRFVYTPAMESVCGYFHRSHARSEEFLIAGKLQ-DGLLHITTCSFVAPWNSLSLAQ 112

Query: 141 KKSLNHRYQMGC-ECKITRCPMIPCYISSPDECLWMDWVTEKSINGHQAKFFACIKRSDG 199
           ++     Y +GC EC +  C  IPC + S   CLW D + + S  G Q++  AC+ R  G
Sbjct: 113 RRGFTKTYTVGCEECTVFPCLSIPCKLQSGTHCLWTDQLLQGSEKGFQSRHLACLPREPG 172

Query: 200 SCAW 203
            C W
Sbjct: 173 LCTW 176


>2TMP-A nrPDB
          Length = 127

 Score =  232 bits (592), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 124/127 (97%), Positives = 125/127 (98%)

Query: 27  CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDKDI 86
           CSCSPVHPQQAFCNADVVIR KAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGP+KDI
Sbjct: 1   CSCSPVHPQQAFCNADVVIRTKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPEKDI 60

Query: 87  EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQKKSLNH 146
           EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLS TQKKSLNH
Sbjct: 61  EFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSTTQKKSLNH 120

Query: 147 RYQMGCE 153
           RYQMGCE
Sbjct: 121 RYQMGCE 127


>1D2B-A nrPDB
          Length = 126

 Score =  183 bits (465), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 58/133 (43%), Positives = 79/133 (59%), Gaps = 14/133 (10%)

Query: 27  CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDK-- 84
           C+C P HPQ AFCN+D+VIRAK V   EV+    +Y       +YEIK  KM+KG     
Sbjct: 1   CTCVPPHPQTAFCNSDLVIRAKFVGTPEVNQ-TTLYQ------RYEIKMTKMYKGFQALG 53

Query: 85  ---DIEFIYTAPSSAVCGVSLDVGGK-KEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQ 140
              DI F+YT    +VCG       + +E+LIAGK + DG +HIT C F+ PW++LS+ Q
Sbjct: 54  DAADIRFVYTPAMESVCGYFHRSHNRSEEFLIAGKLQ-DGLLHITTCSFVAPWNSLSLAQ 112

Query: 141 KKSLNHRYQMGCE 153
           ++     Y +GCE
Sbjct: 113 RRGFTKTYTVGCE 125


>3CKI-B nrPDB
          Length = 121

 Score =  180 bits (457), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 59/129 (45%), Positives = 87/129 (67%), Gaps = 10/129 (7%)

Query: 27  CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDK-- 84
           C+CSP HPQ AFCN+D+VIRAK V +K V  G      P   + Y IKQ+KM++G  K  
Sbjct: 1   CTCSPSHPQDAFCNSDIVIRAKVVGKKLVKEG------PFGTLVYTIKQMKMYRGFTKMP 54

Query: 85  DIEFIYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLSITQKKSL 144
            +++I+T  S ++CG+ L+V  K +YL+ G+   DGKM+  LC+F+  WD L+++Q+K L
Sbjct: 55  HVQYIHTEASESLCGLKLEV-NKYQYLLTGRVY-DGKMYTGLCNFVERWDQLTLSQRKGL 112

Query: 145 NHRYQMGCE 153
           N+RY +GC 
Sbjct: 113 NYRYHLGCN 121


>5L25-A nrPDB
          Length = 652

 Score = 29.7 bits (65), Expect = 0.92,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 89  IYTAPSSAVCGVSLDVGGKKEYLIAGKAEGDGKMHITLCDF 129
           + T  S+A+CG+   + G +  LI G AE    M+  + +F
Sbjct: 69  VQTLASTAICGMIHSIIGGQPLLILGVAEPTVIMYTFMFNF 109


>6AMW-A nrPDB
          Length = 255

 Score = 29.3 bits (64), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 106 GKKEYLIAGKAEGDGKMHITLCDFIVPWD-TLSITQKKSL 144
             KE L+AG +E D  + + L DF+   D TLSIT+ + L
Sbjct: 68  NSKENLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKL 107


>2FO0-A nrPDB
          Length = 495

 Score = 29.3 bits (64), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 106 GKKEYLIAGKAEGDGKMHITLCDFIVPWD-TLSITQKKSL 144
             KE L+AG +E D  + + L DF+   D TLSIT+ + L
Sbjct: 26  NSKENLLAGPSENDPNLFVALYDFVASGDNTLSITKGEKL 65


>2ZHY-A nrPDB
          Length = 183

 Score = 28.5 bits (62), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/33 (45%), Positives = 18/33 (54%)

Query: 183 INGHQAKFFACIKRSDGSCAWYRGAAPPKQEFL 215
           I GH A   A + R DG  A Y G  PP +EF+
Sbjct: 78  IPGHAAITDAHLARLDGWLAHYNGQLPPLEEFI 110


>3J9W-AH nrPDB
          Length = 132

 Score = 27.3 bits (59), Expect = 5.5,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 65  PIKRIQYEIKQIKMFKGPDKDIEFIYTAPSSAVCGVSLDVGGKKEYLIAG 114
           P  +++ EI +I   +G  +D+EF+       +  V L  G   E +I G
Sbjct: 28  PASKLKREIAEILKREGFIRDVEFV-EDSKQGIIRVFLKYGQNNERVITG 76


>4N13-A nrPDB
          Length = 265

 Score = 26.6 bits (57), Expect = 8.0,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 49  AVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDKDIEFI 89
            ++  E+   N    N  K +  EI+  K   GPD  I FI
Sbjct: 91  FITSPEIKITNITEENLAKILNGEIQNWKQVGGPDAKINFI 131


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.315    0.133    0.421 

Lambda     K      H
   0.267   0.0414    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,805,378
Number of Sequences: 36641
Number of extensions: 343808
Number of successful extensions: 685
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 646
Number of HSP's gapped (non-prelim): 26
length of query: 220
length of database: 10,336,785
effective HSP length: 93
effective length of query: 127
effective length of database: 6,929,172
effective search space: 880004844
effective search space used: 880004844
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 57 (26.6 bits)