BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= P25519
(426 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
5ZZM-A nrPDB 865 0.0
2QTH-A nrPDB 129 2e-30
1UDX-A nrPDB 77 2e-14
1LNZ-A nrPDB 60 2e-09
4CSU-9 nrPDB 57 1e-08
5M04-A nrPDB 57 1e-08
1XZP-A nrPDB 49 6e-06
1MKY-A nrPDB 48 1e-05
5DN8-A nrPDB 48 1e-05
2E87-A nrPDB 45 5e-05
2WIC-A nrPDB 44 1e-04
5EE0-A nrPDB 44 1e-04
3R9W-A nrPDB 44 2e-04
3J8G-X nrPDB 44 2e-04
1JAL-A nrPDB 43 2e-04
2OHF-A nrPDB 43 3e-04
2DBY-A nrPDB 42 4e-04
1WF3-A nrPDB 40 0.002
3IZY-P nrPDB 39 0.004
4R98-A nrPDB 38 0.007
3EC1-A nrPDB 38 0.007
2EW1-A nrPDB 37 0.014
6GB2-BC nrPDB 37 0.023
1Z22-A nrPDB 36 0.026
3K53-A nrPDB 36 0.029
5DI3-B nrPDB 36 0.031
4M9Q-A nrPDB 36 0.032
3W5J-A nrPDB 35 0.042
3GEH-A nrPDB 35 0.046
2LKD-A nrPDB 35 0.047
5KH0-A nrPDB 35 0.068
1F6B-A nrPDB 35 0.072
3H2Y-A nrPDB 35 0.088
5LAD-A nrPDB 35 0.092
4DCU-A nrPDB 34 0.094
5X4B-A nrPDB 34 0.098
2G6B-A nrPDB 34 0.11
2ZBI-A nrPDB 34 0.15
2WJG-A nrPDB 34 0.15
2WJI-A nrPDB 33 0.20
3K8W-A nrPDB 33 0.20
3A1U-A nrPDB 33 0.20
1NI3-A nrPDB 33 0.21
4V0N-A nrPDB 33 0.25
3IBY-A nrPDB 32 0.36
3R2W-A nrPDB 32 0.36
3A1W-A nrPDB 32 0.38
4A9A-A nrPDB 32 0.43
4OI0-A nrPDB 32 0.48
2GAO-A nrPDB 32 0.60
2H57-A nrPDB 31 1.0
3GEE-A nrPDB 31 1.3
6MTD-v nrPDB 30 1.4
1XC6-A nrPDB 30 1.6
3JCN-b nrPDB 30 1.6
1U0L-A nrPDB 30 1.6
2DYK-A nrPDB 30 1.9
1ZO1-I nrPDB 30 1.9
4DR0-A nrPDB 30 2.0
4Q7K-A nrPDB 30 2.3
3LX8-A nrPDB 30 2.3
3B5X-A nrPDB 30 2.5
5JSZ-B nrPDB 30 2.7
5CF3-A nrPDB 30 2.8
4V7F-o nrPDB 29 3.3
6QUZ-A nrPDB 29 3.6
1WDT-A nrPDB 29 3.6
4NKR-A nrPDB 29 4.2
3T5G-A nrPDB 29 4.3
3BH6-A nrPDB 29 4.4
3CUE-F nrPDB 29 4.6
5LPG-A nrPDB 29 5.0
6G12-A nrPDB 28 5.2
3IEU-A nrPDB 28 5.6
3CPH-A nrPDB 28 6.5
4B44-A nrPDB 28 6.6
4KJZ-A nrPDB 28 7.2
5EUM-A nrPDB 28 7.3
1T3J-A nrPDB 28 7.5
3J4J-A nrPDB 28 9.0
2OCY-C nrPDB 28 9.7
>5ZZM-A nrPDB
Length = 426
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/426 (100%), Positives = 426/426 (100%)
Query: 1 MFDRYDAGEQAVLVHIYFTQDKDMEDLQEFESLVSSAGVEALQVITGSRKAPHPKYFVGE 60
MFDRYDAGEQAVLVHIYFTQDKDMEDLQEFESLVSSAGVEALQVITGSRKAPHPKYFVGE
Sbjct: 1 MFDRYDAGEQAVLVHIYFTQDKDMEDLQEFESLVSSAGVEALQVITGSRKAPHPKYFVGE 60
Query: 61 GKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECRVIDRTGLILDIFAQRARTHEG 120
GKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECRVIDRTGLILDIFAQRARTHEG
Sbjct: 61 GKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECRVIDRTGLILDIFAQRARTHEG 120
Query: 121 KLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQLETDRRLLRNRIVQIQSRLER 180
KLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQLETDRRLLRNRIVQIQSRLER
Sbjct: 121 KLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQLETDRRLLRNRIVQIQSRLER 180
Query: 181 VEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRID 240
VEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRID
Sbjct: 181 VEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRID 240
Query: 241 VADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNT 300
VADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNT
Sbjct: 241 VADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNT 300
Query: 301 VLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTER 360
VLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTER
Sbjct: 301 VLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTER 360
Query: 361 LSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEEDGSVSLQVRMPIVDWRRLCKQEPA 420
LSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEEDGSVSLQVRMPIVDWRRLCKQEPA
Sbjct: 361 LSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEEDGSVSLQVRMPIVDWRRLCKQEPA 420
Query: 421 LIDYLI 426
LIDYLI
Sbjct: 421 LIDYLI 426
>2QTH-A nrPDB
Length = 364
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 163/291 (56%), Gaps = 13/291 (4%)
Query: 50 KAPHPKYFVGEGKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECR-VIDRTGLIL 108
K+P+ K+++ K +I + +++++F+ L P N+ R + + V+D+ L+L
Sbjct: 35 KSPNVKFYIQYDKLQQIKNDEEI--STLIIFEQ-LKPRHFINIRRELKGKEVLDKILLLL 91
Query: 109 DIFAQRARTHEGKLQVELAQLRHLATRLVRGWTH--LERQKGGIGLRGPGETQLETDRRL 166
+IFA A + E K+Q+ELA+L++ + +T + Q+G +G G +E+ +
Sbjct: 92 EIFALHAGSKEAKMQIELARLKYELPIIKETYTKSKIGEQQGPLG---AGTYGVESTIKF 148
Query: 167 LRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAAD 226
+ RI ++ LE ++ +E+ +S + ++P++ +VGYTN+GK++LFN +T
Sbjct: 149 YKRRINKLMKELESIKIFKEKSIESNKRNNIPSIGIVGYTNSGKTSLFNSLTGLTQKVDT 208
Query: 227 QLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDA 286
+LF T+ P I + + + +L DTVGFIR +P +V AF TL E + + L+ VID+
Sbjct: 209 KLFTTMSPKRYAIPINN-RKIMLVDTVGFIRGIPPQIVDAFFVTLSEAKYSDALILVIDS 267
Query: 287 --ADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLE-DFEPRIDRDEE 334
++ + E +++ +L EI P L+ +NKID + D ++D E+
Sbjct: 268 TFSENLLIETLQSSFEILREIGVSGKPILVTLNKIDKINGDLYKKLDLVEK 318
>1UDX-A nrPDB
Length = 416
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 98/190 (51%), Gaps = 19/190 (10%)
Query: 180 RVEKQREQGRQSRIKAD---VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTL 236
R + E+G + R++ + + V LVGY NAGKS+L +T A A F TL P L
Sbjct: 137 RFAEAGEEGEKRRLRLELMLIADVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNL 196
Query: 237 RRIDVADVGETVLADTVGFIRHLPH--DLVAAFKATLQETRQATLLLHVIDAADVRVQEN 294
++V++ LAD G I L F + TR +LL+V+DAAD E
Sbjct: 197 GVVEVSEEERFTLADIPGIIEGASEGKGLGLEFLRHIARTR---VLLYVLDAAD----EP 249
Query: 295 IEAVNTVLEEIDAHEI-----PTLLVMNKIDMLEDFEPRIDRDEENKPNRVWL--SAQTG 347
++ + T+ +E+ A++ P+L+ +NK+D+LE+ + D + L SA TG
Sbjct: 250 LKTLETLRKEVGAYDPALLRRPSLVALNKVDLLEEEAVKALADALAREGLAVLPVSALTG 309
Query: 348 AGIPQLFQAL 357
AG+P L +AL
Sbjct: 310 AGLPALKEAL 319
>1LNZ-A nrPDB
Length = 342
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 16/173 (9%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
V LVG+ + GKSTL + ++ A+ AD F TL P L ++ D V+AD G I
Sbjct: 161 VGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLIEGA 220
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEI-----PTLL 314
H V L+ + +++HVID + + ++ + T+ +E+ + + P ++
Sbjct: 221 -HQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYNLRLTERPQII 279
Query: 315 VMNKIDM------LEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERL 361
V NK+DM LE F+ ++ D P +SA T G+ +L + +L
Sbjct: 280 VANKMDMPEAAENLEAFKEKLTDDYPVFP----ISAVTREGLRELLFEVANQL 328
>4CSU-9 nrPDB
Length = 390
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
V ++G NAGKST ++ A+ AD F TL P+L + + + V+AD G I
Sbjct: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGA 221
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHE-----IPTLL 314
+ L+ + +LLH+ID + + +E ++ E++ + P L
Sbjct: 222 AEGAGLGIR-FLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWL 280
Query: 315 VMNKIDMLEDFE 326
V NKID+L+ E
Sbjct: 281 VFNKIDLLDKVE 292
>5M04-A nrPDB
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
V ++G NAGKST ++ A+ AD F TL P+L + + + V+AD G I
Sbjct: 182 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGA 241
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHE-----IPTLL 314
+ L+ + +LLH+ID + + +E ++ E++ + P L
Sbjct: 242 AEGAGLGIR-FLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWL 300
Query: 315 VMNKIDMLEDFE 326
V NKID+L+ E
Sbjct: 301 VFNKIDLLDKVE 312
>1XZP-A nrPDB
Length = 482
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 22/196 (11%)
Query: 173 QIQSRLERVEKQREQGRQSRIKADVPT-------VSLVGYTNAGKSTLFNR-ITEARVYA 224
++ +RLER+ +E+ + KAD + +VG N GKSTL NR + E R
Sbjct: 215 EVVTRLERI---KEKLTEELKKADAGILLNRGLRMVIVGKPNVGKSTLLNRLLNEDRAIV 271
Query: 225 ADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVA--AFKATLQETRQATLLLH 282
D T D I + + ++ DT G +R +DLV + TLQE +A ++L
Sbjct: 272 TDIPGTTRDVISEEIVIRGILFRIV-DTAG-VRSETNDLVERLGIERTLQEIEKADIVLF 329
Query: 283 VIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDF-EPRIDRDEENKPNRVW 341
V+DA+ +E+ +LE I L+V+NK+D++E E I + V
Sbjct: 330 VLDASSPLDEED----RKILERIKNKRY--LVVINKVDVVEKINEEEIKNKLGTDRHMVK 383
Query: 342 LSAQTGAGIPQLFQAL 357
+SA G G+ +L +++
Sbjct: 384 ISALKGEGLEKLEESI 399
>1MKY-A nrPDB
Length = 439
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 11/132 (8%)
Query: 199 TVSLVGYTNAGKSTLFNR-ITEARVYAADQLFATLDPTLRRIDVADVGETV-LADTVGFI 256
TV +VG N GKSTLFN+ + + + D+ T DP ++ G+T L DT G
Sbjct: 3 TVLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEW--YGKTFKLVDTCGVF 60
Query: 257 RHLPHDLVA--AFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLL 314
+ P D+++ + TL R+A L+L V+D +E+ E++ L + + T+L
Sbjct: 61 DN-PQDIISQKMKEVTLNMIREADLVLFVVDGKRGITKED-ESLADFLRK---STVDTIL 115
Query: 315 VMNKIDMLEDFE 326
V NK + L +FE
Sbjct: 116 VANKAENLREFE 127
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 195 ADVPTVSLVGYTNAGKSTLFNRI-TEARVYAADQLFATLDPTLRRIDVADVGETVLADTV 253
D V++VG N GKSTLFN I + R + T DP + + D + V DT
Sbjct: 178 TDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFI-DGRKYVFVDTA 236
Query: 254 GFIRH 258
G R
Sbjct: 237 GLRRK 241
>5DN8-A nrPDB
Length = 446
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 95/218 (43%), Gaps = 37/218 (16%)
Query: 200 VSLVGYTNAGKSTLFNR-ITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRH 258
++++G N GKSTL NR + E RV DQ T D D T L DT G R
Sbjct: 181 IAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYT-LIDTAGIRRR 239
Query: 259 LP-HDLVAAFK--ATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLV 315
D V F +LQ A +++ ++DA ++++ +N ++E + ++
Sbjct: 240 AKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEA----GVSLIIA 295
Query: 316 MNKIDML-----EDFEPRIDRDEE--NKPNRVWLSAQTGAGIPQLFQA------------ 356
+NK D L ++ IDR + R ++SA G G+ +LF+A
Sbjct: 296 VNKWDGLNIEERDNVRNAIDRRMPFVDFARRYFISALHGTGVGKLFRAIQESYQSIQQEL 355
Query: 357 ----LTERLSGEVAQHTLRLPP--QEGRLRSRFYQLQA 388
LT L VA+H PP + R+R R+ L A
Sbjct: 356 TTGQLTRALEKAVAEHE---PPLVKGRRIRLRYAHLGA 390
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 194 KADVPTVSLVGYTNAGKSTLFNRITEAR 221
A +P +++VG N GKSTLFN +T++R
Sbjct: 2 NAMLPVIAIVGRPNVGKSTLFNYLTKSR 29
>2E87-A nrPDB
Length = 357
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 29/218 (13%)
Query: 174 IQSRLERVEKQREQGRQ-SRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATL 232
I RL + K RE + + ++PTV + G+ N GKSTL +T A+ A F T
Sbjct: 143 IDDRLRYLNKAREVLKDLPVVDLEIPTVVIAGHPNVGKSTLLKALTTAKPEIASYPFTT- 201
Query: 233 DPTLRRIDVADVGETV----LADTVGFI-RHLPHDLVAAFKATLQETRQATLLLHVIDAA 287
R I+V + + DT G + R + +A L L++++ D +
Sbjct: 202 ----RGINVGQFEDGYFRYQIIDTPGLLDRPISERNEIEKQAILALRYLGNLIIYIFDPS 257
Query: 288 D---VRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDE----ENKPNRV 340
+ ++E I V E ++P L+V+NKID+ + E I R E E N +
Sbjct: 258 EHCGFPLEEQIHLFEEVHGEF--KDLPFLVVINKIDVAD--EENIKRLEKFVKEKGLNPI 313
Query: 341 WLSAQTGAGIP-------QLFQALTERLSGEVAQHTLR 371
+SA G GI + + L E+++ E + LR
Sbjct: 314 KISALKGTGIDLVKEEIIKTLRPLAEKVAREKIERELR 351
>2WIC-A nrPDB
Length = 267
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 23/144 (15%)
Query: 199 TVSLVGYTNAGKSTLFNRITEAR----------VYAADQLFATLDPTLRRIDVADVGETV 248
TV L+G N+GK+TLFN++T AR V + +FAT D ++ + D+ T
Sbjct: 5 TVGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGIFATTD---HQVTLVDLPGTY 61
Query: 249 LADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAH 308
T+ L + + + A +L++V+DA+ N+E + ++
Sbjct: 62 SLTTISSQTSLDEQIACHYIL----SGDADMLINVVDAS------NLERNLYLTLQLLEL 111
Query: 309 EIPTLLVMNKIDMLEDFEPRIDRD 332
IP ++ +N +D+ E + RID D
Sbjct: 112 GIPCVVALNMLDIAEKQQVRIDID 135
>5EE0-A nrPDB
Length = 395
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 63/149 (42%), Gaps = 30/149 (20%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVAD---------------- 243
+ +VG N GKST FN +T+ + A + F T+DP R+ V D
Sbjct: 28 IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEV 87
Query: 244 VGETVLADTVGFIR--HLPHDLVAAFKATLQETRQATLLLHVIDAAD----VRVQENIEA 297
+ D G +R H L AF L R + HV+ A + + ++++
Sbjct: 88 SAYLEINDIAGLVRGAHAGEGLGNAF---LSHIRAVDGIFHVLRAFEDKEVTHIDDSVDP 144
Query: 298 V---NTVLEEIDAHEIPTLLVMNKIDMLE 323
V T+ EE+ +I V NKID LE
Sbjct: 145 VRDLETIGEELRLKDIE--FVQNKIDDLE 171
>3R9W-A nrPDB
Length = 307
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 22/177 (12%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADV---GETVLADTVGFI 256
V++VG N GKSTL N + +V T +R + V ++ + + DT G
Sbjct: 12 VAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTT--RMRVLGVKNIPNEAQIIFLDTPGIY 69
Query: 257 RH-----LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIP 311
L H +V K +L+E A ++L +IDA + + E ++ ++ P
Sbjct: 70 EPKKSDVLGHSMVEIAKQSLEE---ADVILFMIDATEGWRPRDEEIYQNFIKPLNK---P 123
Query: 312 TLLVMNKIDML---EDFEPRIDRDEENKPNR---VWLSAQTGAGIPQLFQALTERLS 362
++V+NKID + ++ P ID + P V +SA GA + +L + + + L
Sbjct: 124 VIVVINKIDKIGPAKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLP 180
>3J8G-X nrPDB
Length = 490
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 197 VPTVSLVGYTNAGKSTLFNRITEAR-VYAADQLFATLDPTLRRIDVADVGETVLADTVGF 255
VP V+LVG N GKSTLFNR+T R AD T D R ++ + E + DT G
Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEI-EGREFICIDTGGI 60
Query: 256 IRHLPHDLVAAFKA--TLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTL 313
D V A +L +A ++L ++DA + A + + + + E PT
Sbjct: 61 --DGTEDGVETRMAEQSLLAIEEADVVLFMVDAR----AGLMPADEAIAKHLRSREKPTF 114
Query: 314 LVMNKIDMLEDFEPRID 330
LV NK D L+ + +D
Sbjct: 115 LVANKTDGLDPDQAVVD 131
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 16/171 (9%)
Query: 200 VSLVGYTNAGKSTLFNRI-TEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGF-IR 257
+++VG N GKSTL NRI E RV D T D ++ D E VL DT G R
Sbjct: 205 LAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPME-RDGREYVLIDTAGVRKR 263
Query: 258 HLPHDLVAAFKA--TLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLV 315
D V F TLQ A +++ VIDA + +++ + +L + ++V
Sbjct: 264 GKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRS----LVIV 319
Query: 316 MNKIDML-EDFEPRIDRDEENKPNRV------WLSAQTGAGIPQLFQALTE 359
+NK D L ++ + ++ + + + ++SA G+G+ LF+++ E
Sbjct: 320 VNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVRE 370
>1JAL-A nrPDB
Length = 363
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
+VG N GKSTLFN +T+A + AA+ F T++P + + D LA+ V R L
Sbjct: 5 CGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERIL 64
Query: 260 P 260
P
Sbjct: 65 P 65
>2OHF-A nrPDB
Length = 396
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVAD 243
+ +VG N GKST FN +T ++ A + F T+DP R+ V D
Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPD 68
>2DBY-A nrPDB
Length = 368
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 199 TVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVAD 243
V +VG N GKSTLFN +T A AA+ FAT+D + + + D
Sbjct: 3 AVGIVGLPNVGKSTLFNALTRANALAANYPFATIDKNVGVVPLED 47
>1WF3-A nrPDB
Length = 301
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 73/180 (40%), Gaps = 20/180 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
V++VG N GKSTL N + +V T LR I + V DT G H
Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGL--HK 67
Query: 260 PHDLVAAFKATLQETRQA----TLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLV 315
P D + F QE +A ++ V+D E+ E V L+ + ++P LLV
Sbjct: 68 PMDALGEFMD--QEVYEALADVNAVVWVVDLRHPPTPED-ELVARALKPL-VGKVPILLV 123
Query: 316 MNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQ 375
NK+D + E + E P P++ AL ER E+ L L P+
Sbjct: 124 GNKLDAAKYPEEAMKAYHELLPE----------AEPRMLSALDERQVAELKADLLALMPE 173
>3IZY-P nrPDB
Length = 537
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 12/126 (9%)
Query: 198 PTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIR 257
P V+++G+ + GK+TL +++ + +V A + T + + + DT G
Sbjct: 5 PVVTIMGHVDHGKTTLLDKLRKTQVAAMEAGGITQHIGAFLVSLPSGEKITFLDTPGH-- 62
Query: 258 HLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMN 317
AAF A Q T ++ ++ AAD V + + V ++ DAH +P +L +N
Sbjct: 63 -------AAFSAMRARGTQVTDIVILVVAADDGVMK--QTVESIQHAKDAH-VPIVLAIN 112
Query: 318 KIDMLE 323
K D E
Sbjct: 113 KCDKAE 118
>4R98-A nrPDB
Length = 271
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 17/141 (12%)
Query: 199 TVSLVGYTNAGKSTLFNRITEARVYAADQLFATLD-------PTLRRIDVADVGETVLAD 251
T+ L+G N+GK+TLFN++T +R + T++ T ++ + D+ T
Sbjct: 5 TIGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFSTTDHQVTLVDLPGTYSLT 64
Query: 252 TVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIP 311
T+ L + + + A LL++V+DA+ N+E + ++ IP
Sbjct: 65 TISSQTSLDEQIACHYIL----SGDADLLINVVDAS------NLERNLYLTLQLLELGIP 114
Query: 312 TLLVMNKIDMLEDFEPRIDRD 332
++ +N +D+ E RI+ D
Sbjct: 115 CIVALNMLDIAEKQNIRIEID 135
>3EC1-A nrPDB
Length = 369
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 12/83 (14%)
Query: 178 LERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDP--T 235
+E + + RE G V +VG TN GKST NRI E + + + P T
Sbjct: 153 MEAINRYREGG----------DVYVVGCTNVGKSTFINRIIEEATGKGNVITTSYFPGTT 202
Query: 236 LRRIDVADVGETVLADTVGFIRH 258
L I++ L DT G I H
Sbjct: 203 LDMIEIPLESGATLYDTPGIINH 225
>2EW1-A nrPDB
Length = 201
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 23/181 (12%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETV---LADTVGFI 256
+ L+G GK+ L R T+ +D ++ +++ GE V + DT G
Sbjct: 29 IVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEIN--GEKVKLQIWDTAGQE 86
Query: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEID---AHEIPTL 313
R F++ Q ++ L I D+ +E+ + L EI+ ++++ T+
Sbjct: 87 R---------FRSITQSYYRSANAL--ILTYDITCEESFRCLPEWLREIEQYASNKVITV 135
Query: 314 LVMNKIDMLEDFEPRIDRDEE--NKPNRVWL--SAQTGAGIPQLFQALTERLSGEVAQHT 369
LV NKID+ E E R EE + +L SA+ + +LF L RL E Q+T
Sbjct: 136 LVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNT 195
Query: 370 L 370
L
Sbjct: 196 L 196
>6GB2-BC nrPDB
Length = 657
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 72/159 (45%), Gaps = 12/159 (7%)
Query: 165 RLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYA 224
+L +++ Q + R + +R Q + + P V+++G+ + GK+TL ++ + +V A
Sbjct: 78 KLKWSKLKQDKVRKNKDAVRRPQADPALLTPRSPVVTIMGHVDHGKTTLLDKFRKTQVAA 137
Query: 225 ADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVI 284
+ T + + + DT G AAF A Q T ++ ++
Sbjct: 138 VETGGITQHIGAFLVSLPSGEKITFLDTPGH---------AAFSAMRARGAQVTDIVVLV 188
Query: 285 DAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLE 323
AAD V + + V ++ DA ++P +L +NK D E
Sbjct: 189 VAADDGVMK--QTVESIQHAKDA-QVPIILAVNKCDKAE 224
>1Z22-A nrPDB
Length = 168
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRHLP 260
+VG GKS++ R + + +D R+I V D +L DT G
Sbjct: 10 VVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAG-----Q 64
Query: 261 HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAH--EIPTLLVMNK 318
+ A KA + + L+ D +E+ EA+++ E++ A +IPT LV NK
Sbjct: 65 EEFDAITKAYYRGAQACVLVFSTTD------RESFEAISSWREKVVAEVGDIPTALVQNK 118
Query: 319 IDMLEDFEPRIDRDEENKPNRVWL-----SAQTGAGIPQLFQALTER 360
ID+L+D + + + E R+ L S + + ++F+ L E+
Sbjct: 119 IDLLDDSCIK-NEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEK 164
>3K53-A nrPDB
Length = 271
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 199 TVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRH 258
TV+LVG N GK+T+FN +T R + + T++ ++ + E ++ D G
Sbjct: 5 TVALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGIMEYRE-KEFLVVDLPGIYSL 63
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
H + A +++ ++D+ + + + LE + +LV+NK
Sbjct: 64 TAHSIDELIARNFILDGNADVIVDIVDSTCL-----MRNLFLTLELFEMEVKNIILVLNK 118
Query: 319 IDMLEDFEPRID----RDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTL 370
D+L+ +ID R E P + +A+ G G+ +L + + G+V + +
Sbjct: 119 FDLLKKKGAKIDIKKMRKELGVP-VIPTNAKKGEGVEELKRMIALMAEGKVTTNPI 173
>5DI3-B nrPDB
Length = 263
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 21/128 (16%)
Query: 199 TVSLVGYTNAGKSTLFNRITEARVYAADQLFA----TLDPTLRRIDVADVGETVLADTVG 254
T++L+G NAGK+TL N I F TL+ +I+V D+G
Sbjct: 6 TIALLGLDNAGKTTLLNSIQGEVDRDTTPTFGFNSTTLNEGKYKIEVFDLGGG------- 58
Query: 255 FIRHLPHDLVAAFKATLQETRQATLLLHVIDAADV-RVQENIEAVNTVLEEIDAHEIPTL 313
++ +K L E +++V+DAAD R +E+ + VLE + P
Sbjct: 59 ------KNIRGVWKKYLAEVH---AIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPIC 109
Query: 314 LVMNKIDM 321
+ NK D+
Sbjct: 110 IFANKQDL 117
>4M9Q-A nrPDB
Length = 227
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 21/128 (16%)
Query: 199 TVSLVGYTNAGKSTLFNRITEARVYAADQLFA----TLDPTLRRIDVADVGETVLADTVG 254
T++L+G NAGK+TL N I F TL+ +I+V D+G
Sbjct: 6 TIALLGLDNAGKTTLLNSIQGEVDRDTTPTFGFNSTTLNEGKYKIEVFDLGGG------- 58
Query: 255 FIRHLPHDLVAAFKATLQETRQATLLLHVIDAADV-RVQENIEAVNTVLEEIDAHEIPTL 313
++ +K L E +++V+DAAD R +E+ + VLE + P
Sbjct: 59 ------KNIRGVWKKYLAEVHA---IVYVVDAADPGRFEESKMTMAEVLENQFMRDKPIC 109
Query: 314 LVMNKIDM 321
+ NK D+
Sbjct: 110 IFANKQDL 117
>3W5J-A nrPDB
Length = 204
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDV-ADVGETV----LADTVG 254
++L+G N GKSTLFNR+T + T++ +I + AD+ E + + D G
Sbjct: 6 IALLGMPNTGKSTLFNRMTGGAARVGNWPGITVELLSGKILLGADMVEIIDLPGIYDLHG 65
Query: 255 F------IRHLPHDLVAAFKATL----QETRQATLLLHV 283
F +RH HD V + Q RQ +LLL +
Sbjct: 66 FSDDEQVVRHFLHDNVPDLALVILNATQIERQMSLLLQL 104
>3GEH-A nrPDB
Length = 462
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 200 VSLVGYTNAGKSTLFNRITEA-RVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRH 258
V++VG N GKS+L N +++ R D T D ++ V + VL DT G IR
Sbjct: 227 VAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQLVVGGIPVQVL-DTAG-IRE 284
Query: 259 LPHDLVAAFKATLQETRQAT----LLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLL 314
+ K ++ +RQA L+L IDAA + E + E++ P +L
Sbjct: 285 TSDQV---EKIGVERSRQAANTADLVLLTIDAATGWTTGDQE----IYEQVKHR--PLIL 335
Query: 315 VMNKIDMLE 323
VMNKID++E
Sbjct: 336 VMNKIDLVE 344
>2LKD-A nrPDB
Length = 178
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 23/170 (13%)
Query: 198 PTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIR 257
P V+++G+ + GK+TL + I ++V + T ++ V D T L DT G
Sbjct: 9 PVVTIMGHVDHGKTTLLDAIRHSKVTEQEAGGITQHIGAYQVTVNDKKITFL-DTPG--- 64
Query: 258 HLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMN 317
H+ +A + +L V+ A D + + +EA+N A +P ++ +N
Sbjct: 65 ---HEAFTTMRARGAQVTDIVIL--VVAADDGVMPQTVEAIN----HAKAANVPIIVAIN 115
Query: 318 KIDMLEDFEPRIDRD--EENKPNRVW--------LSAQTGAGIPQLFQAL 357
K+D E R+ ++ E N W LSA+T G+ L + +
Sbjct: 116 KMDKPEANPDRVMQELMEYNLVPEEWGGDTIFCKLSAKTKEGLDHLLEMI 165
>5KH0-A nrPDB
Length = 396
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 12/127 (9%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATL-DPTLRRIDVADVGETVLADTVGF--I 256
+++ G N GKS+ N + V + T DP + ++++ VG L DT G +
Sbjct: 11 IAITGRRNVGKSSFMNALIGQEVSIVSNVAGTTTDPVFKSMELSPVGPITLIDTPGLDDV 70
Query: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVM 316
L + K +L L ++D +E I ++ EIP + +
Sbjct: 71 GELGIKRIKKAKKSLYRADCGIL---IVDDIPGNFEEQI------IKLFKELEIPYFIAI 121
Query: 317 NKIDMLE 323
NKID ++
Sbjct: 122 NKIDTID 128
>1F6B-A nrPDB
Length = 198
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 17/122 (13%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI--RHL 259
+G NAGK+TL + + + R+ Q TL PT + +A + T D G I R +
Sbjct: 30 FLGLDNAGKTTLLHMLKDDRL---GQHVPTLHPTSEELTIAGMTFTTF-DLGGHIQARRV 85
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAAD-VRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
+ + A ++ ++D AD R+ E+ E +++++ + +P L++ NK
Sbjct: 86 WKNYLPAING----------IVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNK 135
Query: 319 ID 320
ID
Sbjct: 136 ID 137
>3H2Y-A nrPDB
Length = 368
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATL---DPTLRRIDVADVGETVLADTVGFI 256
V +VG TN GKST NR+ + + + T TL ID+ E+ L DT G I
Sbjct: 163 VYVVGCTNVGKSTFINRMIKEFSDETENVITTSHFPGTTLDLIDIPLDEESSLYDTPGII 222
Query: 257 RH 258
H
Sbjct: 223 NH 224
>5LAD-A nrPDB
Length = 404
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATL-DPTLRRIDVADVGETVLADTVGFIRH 258
+ + G N GKS+ N + V + T DP + +++ VG L DT G
Sbjct: 12 IVVAGRRNVGKSSFMNALVGQNVSIVSEYAGTTTDPVYKSMELYPVGPVTLVDTPGL--- 68
Query: 259 LPHDLVAAFKATLQETRQ----ATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLL 314
D+ + +++ R+ A + V D+ ++++ VN E EIP ++
Sbjct: 69 --DDVGELGRLRVEKARRVFYRADCGILVTDSEPTPYEDDV--VNLFKE----MEIPFVV 120
Query: 315 VMNKIDML 322
V+NKID+L
Sbjct: 121 VVNKIDVL 128
>4DCU-A nrPDB
Length = 456
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 198 PTVSLVGYTNAGKSTLFNRITEARV 222
P V++VG N GKST+FNRI R+
Sbjct: 24 PVVAIVGRPNVGKSTIFNRIAGERI 48
>5X4B-A nrPDB
Length = 162
Score = 34.3 bits (77), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 198 PTVSLVGYTNAGKSTLFNRITEARV 222
P V++VG N GKST+FNRI R+
Sbjct: 3 PVVAIVGRPNVGKSTIFNRIAGERI 27
>2G6B-A nrPDB
Length = 180
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 24/173 (13%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRR--IDVADVGETV-LADTVG-- 254
V LVG + GK+ L R + + A +T+ R +DV V + + DT G
Sbjct: 13 VMLVGDSGVGKTCLLVRFKDG-AFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQE 71
Query: 255 FIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLL 314
R + H R A LL + D + +NI+A T + E H++ +L
Sbjct: 72 RFRSVTH----------AYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALML 121
Query: 315 VMNKIDMLEDFEPRIDRDEENKPNRVW------LSAQTGAGIPQLFQALTERL 361
+ NK+D E + R++ K + + SA+TG + F A+ + L
Sbjct: 122 LGNKVDSAH--ERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKEL 172
>2ZBI-A nrPDB
Length = 292
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 21/134 (15%)
Query: 111 FAQRARTHEGKLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQLETDRRLLRNR 170
AQ A G++ L ++R LA + G T +TDR L+
Sbjct: 20 LAQTAEGALGEISNNLQRIRELAVQASNG------------------TNTQTDRDALQAE 61
Query: 171 IVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFA 230
+ Q+QS ++RV +Q Q + V NAG++ ++I A+ + L
Sbjct: 62 VTQLQSEIQRVAEQTSFNGQKLLDGSFNGVQFQIGANAGETIGVSKIMNAQTAS---LGG 118
Query: 231 TLDPTLRRIDVADV 244
+L T ID D+
Sbjct: 119 SLTRTTSTIDATDL 132
>2WJG-A nrPDB
Length = 188
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDP----------TLRRIDVADVGETVL 249
++L+G N GKST+FN +T VY + T++ + +D+ V ++
Sbjct: 10 IALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEKFKVVDLPGV-YSLT 68
Query: 250 ADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHE 309
A+++ D + A + E + L+++++DA ++ N+ + L E+ A+
Sbjct: 69 ANSI--------DEIIARDYIINE--KPDLVVNIVDAT--ALERNL-YLTLQLMEMGAN- 114
Query: 310 IPTLLVMNKIDMLEDFEPRIDRDEENK---PNRVWLSAQTGAGIPQLFQALT 358
LL +NK+D+ + ID D+ K V LSA GI +L +A++
Sbjct: 115 --LLLALNKMDLAKSLGIEIDVDKLEKILGVKVVPLSAAKKMGIEELKKAIS 164
>2WJI-A nrPDB
Length = 165
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 71/180 (39%), Gaps = 46/180 (25%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAAD-----------------QLFATLD-PTLRRIDV 241
++L+G N GKST+FN +T VY + + F +D P + +
Sbjct: 6 IALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEKFKVVDLPGVYSLTA 65
Query: 242 ADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTV 301
+ E + D + I P +V AT E R L L
Sbjct: 66 NSIDEIIARDYI--INEKPDLVVNIVDATALE-RNLYLTLQ------------------- 103
Query: 302 LEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENK---PNRVWLSAQTGAGIPQLFQALT 358
L E+ A+ LL +NK+D+ + ID D+ K V LSA GI +L +A++
Sbjct: 104 LMEMGAN---LLLALNKMDLAKSLGIEIDVDKLEKILGVKVVPLSAAKKMGIEELKKAIS 160
>3K8W-A nrPDB
Length = 326
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 21/134 (15%)
Query: 111 FAQRARTHEGKLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQLETDRRLLRNR 170
AQ A G++ L ++R LA + G T +TDR L+
Sbjct: 54 LAQTAEGALGEISNNLQRIRELAVQASNG------------------TNTQTDRDALQAE 95
Query: 171 IVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFA 230
+ Q+QS ++RV +Q Q + V NAG++ ++I A+ + L
Sbjct: 96 VTQLQSEIQRVAEQTSFNGQKLLDGSFNGVQFQIGANAGETIGVSKIMNAQTAS---LGG 152
Query: 231 TLDPTLRRIDVADV 244
+L T ID D+
Sbjct: 153 SLTRTTSTIDATDL 166
>3A1U-A nrPDB
Length = 258
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 18/180 (10%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
V+L G N GK++LFN +T + Y A+ T++ ++ V T T+ I L
Sbjct: 8 VALAGCPNVGKTSLFNALTGTKQYVANWPGVTVE---KKEGVF----TYKGYTINLI-DL 59
Query: 260 PHDLVAAFKATLQETRQATLLLH----VIDAADVRVQENIEAVNTVLEEIDAHEIPTLLV 315
P + + ++ + LL VI AD N E +L EI E +L
Sbjct: 60 PGTYSLGYSSIDEKIARDYLLKGDADLVILVAD---SVNPEQSLYLLLEILEMEKKVILA 116
Query: 316 MNKIDMLEDFEPRIDRDEENKP---NRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRL 372
M ID + +IDR E K V+ S+ TG G+ +L + + E H + L
Sbjct: 117 MTAIDEAKKTGMKIDRYELQKHLGIPVVFTSSVTGEGLEELKEKIVEYAQKNTILHRMIL 176
>1NI3-A nrPDB
Length = 392
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 201 SLVGYTNAGKSTLFNRITEARV-YAADQLFATLDPTLRRIDVAD 243
+VG N GKST F IT++ + A+ +AT+DP ++ V D
Sbjct: 24 GIVGMPNVGKSTFFRAITKSVLGNPANYPYATIDPEEAKVAVPD 67
>4V0N-A nrPDB
Length = 169
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 24/175 (13%)
Query: 199 TVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRH 258
V +VG N+GK+T+ R+ + R A ++ T+ T+ ++ + TV D G R+
Sbjct: 8 NVLVVGLDNSGKTTIIERL-KPRPRQAAEVAPTVGFTVDEVEKGPLTFTVF-DMSGAGRY 65
Query: 259 LPHDLVAAFKATLQE--TRQATLLLHVIDAAD-VRVQENIEAVNTVLEEIDAHEIPTLLV 315
TL E R+A ++ V+D+AD +R+ + + +L+ + ++P L
Sbjct: 66 ----------RTLWEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPILYF 115
Query: 316 MNKIDMLEDFEP-------RIDRDEENKPNRVWLS-AQTGAGIPQLFQALTERLS 362
NK D+ P +D D +++P ++ S TG G+ + L ERLS
Sbjct: 116 ANKKDLPVAMPPVEIAQALGLD-DIKDRPWQIVPSNGLTGEGVDKGIDWLAERLS 169
>3IBY-A nrPDB
Length = 256
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 37/206 (17%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLP- 260
L+G N GK+TLFN +T A + T++ GE +L + + I LP
Sbjct: 6 LIGNPNCGKTTLFNALTNANQRVGNWPGVTVEK--------KTGEFLLGEHLIEITDLPG 57
Query: 261 -HDLVAAFKATLQETRQAT---------LLLHVIDAADVRVQENIEAVNTVLEEIDAHEI 310
+ LVA + Q+ + A +++VIDA + E + + L E+
Sbjct: 58 VYSLVANAEGISQDEQIAAQSVIDLEYDCIINVIDACHL---ERHLYLTSQLFELGK--- 111
Query: 311 PTLLVMNKIDMLEDFEPRIDRDEENK---PNRVWLSAQTGAGIPQLFQALTE-------- 359
P ++ +N +D+ E ID ++ + + + A GIP L Q+L
Sbjct: 112 PVVVALNMMDIAEHRGISIDTEKLESLLGCSVIPIQAHKNIGIPALQQSLLHCSQKIKPL 171
Query: 360 RLSGEVAQHTLRLPPQEGRLRSRFYQ 385
+LS VA + L E +L S+ Y+
Sbjct: 172 KLSLSVAAQQI-LNDLENQLISKGYK 196
>3R2W-A nrPDB
Length = 528
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 57 FVGEGKAVEIAEAVKATGASVVLF--DHALSPAQERNLERLCECRVIDRTGLILDIFAQR 114
F+GEGK + GA+V L+ +H ++P + E + E R D+
Sbjct: 259 FIGEGKEYIFVSNIDNLGATVDLYILNHLMNPPNGKRCEFVMEVTNKTRA----DVKGGT 314
Query: 115 ARTHEGKLQ-VELAQL 129
+EGKL+ VE+AQ+
Sbjct: 315 LTQYEGKLRLVEIAQV 330
>3A1W-A nrPDB
Length = 168
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 22/169 (13%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
V+L G N GK++LFN +T + Y A+ T++ ++ V T T+ I L
Sbjct: 8 VALAGCPNVGKTSLFNALTGTKQYVANWPGVTVE---KKEGVF----TYKGYTINLI-DL 59
Query: 260 PHDLVAAFKATLQETRQATLL-----LHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLL 314
P + + ++ + LL L ++ A V ++++ +L EI E +L
Sbjct: 60 PGTYSLGYSSIDEKIARDYLLKGDADLVILVADSVNPEQSL----YLLLEILEMEKKVIL 115
Query: 315 VMNKIDMLEDFEPRIDRDEENK----PNRVWLSAQTGAGIPQLFQALTE 359
M ID + +IDR E K P V+ S+ TG G+ +L + + E
Sbjct: 116 AMTAIDEAKKTGMKIDRYELQKHLGIP-VVFTSSVTGEGLEELKEKIVE 163
>4A9A-A nrPDB
Length = 376
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 194 KADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATL 232
+ V +V VG+ + GKSTL +++T AA+ F TL
Sbjct: 69 RTGVASVGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTL 107
>4OI0-A nrPDB
Length = 431
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 12/136 (8%)
Query: 172 VQIQSRLERVEKQRE-QGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAA-DQLF 229
+ I + +E V K+RE Q + KA P + LVG T+ GK+T+ + V +F
Sbjct: 91 LNIHAAMEEVRKKREEQAAGNSNKAKGPRLLLVGPTDVGKTTVSRILCNYSVRQGRTPIF 150
Query: 230 ATLDPTLRRIDVADVGETVL----ADTV-GFIRHLPHDLVAAFKATLQETRQA---TLLL 281
LD + V VL AD + GF R+ P +V F T + L
Sbjct: 151 VELDVGQNSVSVPGTVAAVLVQKTADVIDGFERNQP--IVFNFGHTSPSANLSLYEALFK 208
Query: 282 HVIDAADVRVQENIEA 297
+ + ++QEN EA
Sbjct: 209 EMATTLNAQIQENDEA 224
>2GAO-A nrPDB
Length = 208
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGF--IRHL 259
+G NAGK+TL + + + R+ Q TL PT + +A + T D G R +
Sbjct: 40 FLGLDNAGKTTLLHMLKDDRL---GQHVPTLHPTSEELTIAGMTFTTF-DLGGHEQARRV 95
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAAD-VRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
+ + A ++ ++D AD R+ E+ +N ++ + +P L++ NK
Sbjct: 96 WKNYLPAING----------IVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNK 145
Query: 319 ID 320
ID
Sbjct: 146 ID 147
>2H57-A nrPDB
Length = 190
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 62/125 (49%), Gaps = 13/125 (10%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
V +G N+GK+T+ N++ + + + + T+ ++ + + + TV D G R+
Sbjct: 24 VLCLGLDNSGKTTIINKLKPSNAQSQN-ILPTIGFSIEKFKSSSLSFTVF-DMSGQGRY- 80
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAAD-VRVQENIEAVNTVLE--EIDAHEIPTLLVM 316
+L + ++ ++ VID++D +R+ E ++T+L +I IP L
Sbjct: 81 -RNLWEHY------YKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFA 133
Query: 317 NKIDM 321
NK+D+
Sbjct: 134 NKMDL 138
>3GEE-A nrPDB
Length = 476
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 78/193 (40%), Gaps = 11/193 (5%)
Query: 172 VQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFAT 231
+QI++ V + + + RI ++ + + G NAGKSTL N + + T
Sbjct: 208 MQIETLRSEVNRLIDSYQHGRIVSEGVSTVIAGKPNAGKSTLLNTLLGQERAIVSHMPGT 267
Query: 232 LDPTLRRIDVADVGETVLADTVGF---IRHLPHDLVAAFKATLQETRQATLLLHVIDAAD 288
+ + D L DT G + H+ + + + +A L+L+++D
Sbjct: 268 TRDYIEECFIHDKTMFRLTDTAGLREAGEEIEHE---GIRRSRMKMAEADLILYLLDLGT 324
Query: 289 VRVQENIEAVNTVLEEIDAHEIPTLL-VMNKIDMLEDFEPRIDRDEENKPNRV-WLSAQT 346
R+ + + + E AH L V NK+D + + I + V +SA
Sbjct: 325 ERLDDELTEIR---ELKAAHPAAKFLTVANKLDRAANADALIRAIADGTGTEVIGISALN 381
Query: 347 GAGIPQLFQALTE 359
G GI L Q + +
Sbjct: 382 GDGIDTLKQHMGD 394
>6MTD-v nrPDB
Length = 839
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 194 KADVPTVSLVGYTNAGKSTLFNR-ITEARVYA--------ADQLFATLDPT-LRRIDVAD 243
KA++ +S++ + + GKSTL + + +A + A A LF L L I +
Sbjct: 15 KANIRNMSVIAHVDHGKSTLTDSLVCKAGIIARCITIKSTAISLFYELSENDLNFIKQSK 74
Query: 244 VGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLE 303
G L + + H+ D + A L+ T A +++ + V+ + TVL
Sbjct: 75 DGAGFLINLIDSPGHV--DFSSEVTAALRVTDGALVVVDCVSGVCVQTE-------TVLR 125
Query: 304 EIDAHEIPTLLVMNKID 320
+ A I +L+MNK+D
Sbjct: 126 QAIAERIKPVLMMNKMD 142
>1XC6-A nrPDB
Length = 971
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Query: 282 HVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVW 341
+V A + +N A T+ +V++ + + ED+ I ++ P +
Sbjct: 726 YVGSWAGTSINDNNNATYTLPTLQSGKNYVITVVIDNMGLDEDW--TIGSEDMKNPRGII 783
Query: 342 LSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRL---RSRFYQLQAIEKEW 393
+ +G + LT L GE + T+R P EG L R F+Q Q ++W
Sbjct: 784 QYSLSGQEASAISWKLTGNLGGENYRDTVRGPLNEGGLYAERQGFHQPQPPTQKW 838
>3JCN-b nrPDB
Length = 890
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 179 ERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRR 238
E V R+ G + +A P V+++G+ + GK++L + I +V + + T
Sbjct: 375 EAVMSDRDTGAAAEPRA--PVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYH 432
Query: 239 IDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQ-ENIEA 297
++ + G DT G AAF + QAT ++ ++ AAD V + IEA
Sbjct: 433 VETEN-GMITFLDTPGH---------AAFTSMRARGAQATDIVVLVVAADDGVMPQTIEA 482
Query: 298 VNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRD--------EE--NKPNRVWLSAQTG 347
+ + A ++P ++ +NKID E R+ + EE + V +SA+ G
Sbjct: 483 I----QHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAG 538
Query: 348 AGIPQLFQAL 357
GI +L A+
Sbjct: 539 TGIDELLDAI 548
>1U0L-A nrPDB
Length = 301
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 306 DAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVW----LSAQTGAGIPQLFQALTERL 361
+ +E+ T++V+NK+D+ ++ + R R+ E + ++ SA+TG GI +L + L ++
Sbjct: 112 EKNELETVMVINKMDLYDEDDLRKVRELEEIYSGLYPIVKTSAKTGMGIEELKEYLKGKI 171
Query: 362 S 362
S
Sbjct: 172 S 172
>2DYK-A nrPDB
Length = 161
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 17/127 (13%)
Query: 200 VSLVGYTNAGKSTLFNRITEAR-VYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRH 258
V +VG N GKS+LFNR+ + R AD T D ++ D G +L DT G
Sbjct: 4 VVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVE-TDRGRFLLVDTGGLWSG 62
Query: 259 LPHDLVAAFKATLQET-----RQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTL 313
++ +QE A ++L +D Q + E V E + P +
Sbjct: 63 ------DKWEKKIQEKVDRALEDAEVVLFAVDGRAELTQADYE----VAEYLRRKGKPVI 112
Query: 314 LVMNKID 320
LV K+D
Sbjct: 113 LVATKVD 119
>1ZO1-I nrPDB
Length = 501
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 25/171 (14%)
Query: 198 PTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIR 257
P V+++G+ + GK++L I +V + + T ++ + G DT G
Sbjct: 5 PVVTIMGHVDHGKTSLLEYIRSTKVASGEAGGITQHIGAYHVETEN-GMITFLDTPGH-- 61
Query: 258 HLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQ-ENIEAVNTVLEEIDAHEIPTLLVM 316
AAF + QAT ++ ++ AAD V + IEA+ + A ++P ++ +
Sbjct: 62 -------AAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAI----QHAKAAQVPVVVAV 110
Query: 317 NKIDMLEDFEPRIDRD--------EE--NKPNRVWLSAQTGAGIPQLFQAL 357
NKID E R+ + EE + V +SA+ G GI +L A+
Sbjct: 111 NKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAI 161
>4DR0-A nrPDB
Length = 350
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 3 DRYDAGEQAVLVHIYFTQDKDMEDLQEFESLVSSAGVEALQVITGSRKAPHPKYFVGEGK 62
++Y + ++V +Y KD +++ F+++V+S +E+ +G +P YF G+GK
Sbjct: 149 NKYLQKKAQMIVGLYKAIQKD-DEISLFKAMVASVYLESFLFYSGFY---YPLYFYGQGK 204
Query: 63 AVEIAEAVK 71
++ E +
Sbjct: 205 LMQSGEIIN 213
>4Q7K-A nrPDB
Length = 250
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 14/77 (18%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDV--ADVGETVLADTVGFIR 257
V+++G T +GKSTL N I +DP R++V DV L D G I
Sbjct: 34 VAVLGETGSGKSTLMNLIPR-----------LIDPERGRVEVDELDVRTVKLKDLRGHIS 82
Query: 258 HLPHDLVAAFKATLQET 274
+P + V F T++E
Sbjct: 83 AVPQETV-LFSGTIKEN 98
>3LX8-A nrPDB
Length = 272
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 84/191 (43%), Gaps = 15/191 (7%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETV-LADTVGFIRH 258
++L+G N+GK++LFN IT + T++ R+ + + + + D G
Sbjct: 6 IALIGNPNSGKTSLFNLITGHNQRVGNWPGVTVE---RKSGLVKKNKDLEIQDLPGIYSM 62
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
P+ +++A +L+V+DA + ++ N+ ++E IP + +N
Sbjct: 63 SPYSPEEKVARDYLLSQRADSILNVVDATN--LERNLYLTTQLIET----GIPVTIALNM 116
Query: 319 IDMLEDFEPRIDRDEENKPNRVWLSAQTG---AGIPQLFQALTERLSGEVAQHTLRLPPQ 375
ID+L+ +I+ D+ + V + A + G+ Q+ + + V L P
Sbjct: 117 IDVLDGQGKKINVDKLSYHLGVPVVATSALKQTGVDQVVKKAAHTTTSTVGD--LAFPIY 174
Query: 376 EGRLRSRFYQL 386
+ RL + Q+
Sbjct: 175 DDRLEAAISQI 185
>3B5X-A nrPDB
Length = 582
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Query: 185 REQGRQSRIKADVP---TVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDV 241
+E+ S + +P TV+LVG + +GKST+ N T R Y D LD DV
Sbjct: 354 KEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFT--RFYDVDSGSICLDGH----DV 407
Query: 242 ADVGETVLADTVGFIR---HLPHDLVA---AFKATLQETRQ 276
D T L + HL +D +A A+ A + TR+
Sbjct: 408 RDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTRE 448
>5JSZ-B nrPDB
Length = 287
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 13/53 (24%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADT 252
++LVG+T +GKSTL A L PT +I++A G T+ +T
Sbjct: 36 IALVGHTGSGKSTLMQHFN-----------ALLKPTSGKIEIA--GYTITPET 75
>5CF3-A nrPDB
Length = 331
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 282 HVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEP 327
H+I +D ++ ++A +T+ + D H IP+ D+ +DF P
Sbjct: 36 HIIYTSDFKIDNAVKAGDTMTVKYDKHTIPS-------DITDDFTP 74
>4V7F-o nrPDB
Length = 647
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 171 IVQIQSRLERVEKQREQ-GRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLF 229
+ +++ L +E+ R+ GR I + T+ + GY N GKS+ IT++ V F
Sbjct: 140 VKKLRDPLAYLEQVRQHIGRLPSIDPNTRTLLICGYPNVGKSSFLRCITKSDVDVQPYAF 199
Query: 230 AT 231
T
Sbjct: 200 TT 201
>6QUZ-A nrPDB
Length = 587
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 14/77 (18%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDV--ADVGETVLADTVGFIR 257
V+++G T +GKSTL N I +DP R++V DV L D G I
Sbjct: 372 VAVLGETGSGKSTLMNLIPR-----------LIDPERGRVEVDELDVRTVKLKDLRGHIS 420
Query: 258 HLPHDLVAAFKATLQET 274
+P + V F T++E
Sbjct: 421 AVPQETV-LFSGTIKEN 436
>1WDT-A nrPDB
Length = 665
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 29/148 (19%)
Query: 195 ADVPTVSLVGYTNAGKSTLF-------------NRITEARVYAADQLFATLDPTLRRIDV 241
A + TV+LVG+ +GK+TL R+ E A L T R V
Sbjct: 7 AMIRTVALVGHAGSGKTTLTEALLYKTGAKERRGRVEEGTTTTDYTPEAKLHRTTVRTGV 66
Query: 242 ADV---GETV-LADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEA 297
A + G V L D G+ D V + L+ A + + +A+ VQ E
Sbjct: 67 APLLFRGHRVFLLDAPGY-----GDFVGEIRGALEAADAALVAV----SAEAGVQVGTER 117
Query: 298 VNTVLEEIDAHEIPTLLVMNKIDMLEDF 325
TV E + +P ++V+ K+D D+
Sbjct: 118 AWTVAERLG---LPRMVVVTKLDKGGDY 142
>4NKR-A nrPDB
Length = 166
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 198 PTVSLVGYTNAGKSTLFNRITE 219
P V +VG+ N+GK+T RI E
Sbjct: 2 PIVQVVGFQNSGKTTFIERILE 23
>3T5G-A nrPDB
Length = 181
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGET--VLADTVGFIR 257
++++GY + GKS+L + E + D T++ T ++ + E L DT G
Sbjct: 9 IAILGYRSVGKSSLTIQFVEGQF--VDSYDPTIENTFTKLITVNGQEYHLQLVDTAG--- 63
Query: 258 HLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVN-TVLEEIDAHEIPTLLVM 316
D + F T +L++ + + ++ E I+ ++ +L+ + +IP +LV
Sbjct: 64 ---QDEYSIFPQTYSIDINGYILVYSVTS--IKSFEVIKVIHGKLLDMVGKVQIPIMLVG 118
Query: 317 NKIDM 321
NK D+
Sbjct: 119 NKKDL 123
>3BH6-A nrPDB
Length = 164
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 36/165 (21%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPT--LRRIDVADVGETVLADTVGFIRHL 259
L+G NAGK+TL ++ A + + + PT V G + +G +R +
Sbjct: 9 LLGLDNAGKTTLLKQL-------ASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGLRKI 61
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAAD-VRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
+ F+ T +L++VID+AD R +E + + +LEE +P L+ NK
Sbjct: 62 RPYWRSYFENT-------DILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANK 114
Query: 319 IDML---------EDFEPRIDRDEENKPNRVW----LSAQTGAGI 350
D+L E RD RVW SA TG G+
Sbjct: 115 QDLLTAAPASEIAEGLNLHTIRD------RVWQIQSCSALTGEGV 153
>3CUE-F nrPDB
Length = 206
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 23/185 (12%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETV---LADTVGFIRH 258
L+G + GKS L R ++ Y D + +T+ + V G+TV + DT G R
Sbjct: 13 LIGNSGVGKSCLLLRFSD-DTYTNDYI-STIGVDFKIKTVELDGKTVKLQIWDTAGQERF 70
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPT---LLV 315
T R + ++ V D D QE+ V L+EID + T LLV
Sbjct: 71 RT--------ITSSYYRGSHGIIIVYDVTD---QESFNGVKMWLQEIDRYATSTVLKLLV 119
Query: 316 MNKIDMLE----DFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLR 371
NK D+ + +++ + + NK + SA + F + ++ ++Q L
Sbjct: 120 GNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLN 179
Query: 372 LPPQE 376
Q+
Sbjct: 180 ETTQK 184
>5LPG-A nrPDB
Length = 164
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 298 VNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQAL 357
VN+ +E+ + H + T+L+ ++D+ D EP+ E+N+ + W+ + + QLF L
Sbjct: 81 VNSFIEKENYHYV-TILMKGEVDVTHDSEPKNVEPEKNE-SWEWVPWEELPPLDQLFWGL 138
>6G12-A nrPDB
Length = 301
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Query: 174 IQSRLERVEKQREQGRQSR-IKADVPTVSLVGYTNAGKSTLFNRITE 219
I++ E+ E+++ +G + R I+A +VG N GKSTL N++ +
Sbjct: 108 IKATAEKFEREKAKGLKPRAIRA-----MIVGIPNVGKSTLINKLAK 149
>3IEU-A nrPDB
Length = 301
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 15/159 (9%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
+++VG N GKSTL N++ ++ + T + I + + DT G H+
Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGL--HM 68
Query: 260 PHDLVA---AFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVM 316
KA L++ V++ R + E V L E A P +L +
Sbjct: 69 EEKRAINRLMNKAASSSIGDVELVIFVVEGT--RWTPDDEMVLNKLREGKA---PVILAV 123
Query: 317 NKIDMLE---DFEPRID--RDEENKPNRVWLSAQTGAGI 350
NK+D ++ D P + + N + V +SA+TG +
Sbjct: 124 NKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNV 162
>3CPH-A nrPDB
Length = 213
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 51/123 (41%), Gaps = 13/123 (10%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETV---LADTVGFIRH 258
L+G + GKS L R E + + +D ++ +D+ G+ V L DT G R
Sbjct: 25 LIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDIN--GKKVKLQLWDTAGQERF 82
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
+ A+ R A ++ V D D R NI+ + E E LLV NK
Sbjct: 83 --RTITTAY------YRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134
Query: 319 IDM 321
DM
Sbjct: 135 SDM 137
>4B44-A nrPDB
Length = 363
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 149 GIGLRGPGETQLETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNA 208
G+ + T E D +R +V+ Q L+ EK E+ R+ + P V ++G+ +
Sbjct: 28 GVAYKSHASTLEEKDAEAVRE-LVKEQRGLQ--EKLAEEERRKSLPRRPPVVVIMGHVDH 84
Query: 209 GKSTLFNRITEARV 222
GK+TL + + ++R+
Sbjct: 85 GKTTLLDYLRKSRI 98
>4KJZ-A nrPDB
Length = 473
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 149 GIGLRGPGETQLETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNA 208
G+ + T E D +R +V+ Q L+ EK E+ R+ + P V ++G+ +
Sbjct: 27 GVAYKSHASTLEEKDAEAVRE-LVKEQRGLQ--EKLAEEERRKSLPRRPPVVVIMGHVDH 83
Query: 209 GKSTLFNRITEARV 222
GK+TL + + ++R+
Sbjct: 84 GKTTLLDYLRKSRI 97
>5EUM-A nrPDB
Length = 258
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 16/89 (17%)
Query: 187 QGRQ----SRIKADVP---TVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRI 239
QG++ + I VP TV+LVG + +GKST+ N +T R Y +Q LD +
Sbjct: 28 QGKEELALNNISFSVPAGKTVALVGRSGSGKSTIANLVT--RFYDIEQGEILLDG----V 81
Query: 240 DVADVGETVLADTVGFIR---HLPHDLVA 265
++ D + L + + HL +D +A
Sbjct: 82 NIQDYRLSNLRENCAVVSQQVHLFNDTIA 110
>1T3J-A nrPDB
Length = 96
Score = 28.1 bits (61), Expect = 7.5, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 142 HLERQKGGIGLRGPGETQLETDRRLLRNRIVQIQSRLERVEKQ 184
HLE + + +++ + +LLRN+ VQ++S LE KQ
Sbjct: 51 HLEEEIARLSKEIDQLEKMQNNSKLLRNKAVQLESELENFSKQ 93
>3J4J-A nrPDB
Length = 569
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 149 GIGLRGPGETQLETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNA 208
G+ + T E D +R +V+ Q L+ EK E+ R+ + P V ++G+ +
Sbjct: 28 GVAYKSHASTLEEKDAEAVRE-LVKEQRGLQ--EKLAEEERRKSLPRRPPVVVIMGHVDH 84
Query: 209 GKSTLFNRITEARV 222
GK+TL + + ++R+
Sbjct: 85 GKTTLLDYLRKSRI 98
>2OCY-C nrPDB
Length = 170
Score = 27.7 bits (60), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 13/128 (10%)
Query: 197 VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETV---LADTV 253
+ + L+G + GKS L R E + + +D ++ +D+ G+ V L DT
Sbjct: 3 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDIN--GKKVKLQLWDTA 60
Query: 254 GFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTL 313
G R + A+ R A ++ V D D R NI+ + E E L
Sbjct: 61 GQERF--RTITTAY------YRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLL 112
Query: 314 LVMNKIDM 321
LV NK DM
Sbjct: 113 LVGNKSDM 120
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
5ZZM-A nrPDB 627 e-180
2QTH-A nrPDB 316 1e-86
1LNZ-A nrPDB 158 4e-39
5DN8-A nrPDB 153 1e-37
2E87-A nrPDB 152 2e-37
1UDX-A nrPDB 151 5e-37
4CSU-9 nrPDB 142 2e-34
5M04-A nrPDB 142 4e-34
3R9W-A nrPDB 138 5e-33
1XZP-A nrPDB 137 9e-33
1WF3-A nrPDB 132 4e-31
3J8G-X nrPDB 130 1e-30
1MKY-A nrPDB 116 2e-26
5EE0-A nrPDB 111 7e-25
2WIC-A nrPDB 105 3e-23
2OHF-A nrPDB 99 5e-21
1JAL-A nrPDB 90 2e-18
2DBY-A nrPDB 86 4e-17
Sequences not found previously or not previously below threshold:
5X4B-A nrPDB 109 3e-24
4DCU-A nrPDB 108 5e-24
3GEH-A nrPDB 98 5e-21
2WJG-A nrPDB 96 4e-20
2DYK-A nrPDB 96 4e-20
4R98-A nrPDB 96 4e-20
2WJI-A nrPDB 94 9e-20
3A1W-A nrPDB 91 1e-18
3LX8-A nrPDB 89 2e-18
3A1U-A nrPDB 89 3e-18
2GJ9-A nrPDB 89 4e-18
3K53-A nrPDB 89 5e-18
3GEE-A nrPDB 86 3e-17
3IEU-A nrPDB 86 4e-17
5LAD-A nrPDB 83 2e-16
5KH0-A nrPDB 82 4e-16
3IBY-A nrPDB 82 4e-16
2QU8-A nrPDB 72 4e-13
3W5J-A nrPDB 72 6e-13
4A9A-A nrPDB 71 7e-13
4V7F-o nrPDB 71 1e-12
2CXX-A nrPDB 71 1e-12
1NI3-A nrPDB 69 3e-12
1WXQ-A nrPDB 67 1e-11
6GB2-BC nrPDB 66 3e-11
3IZY-P nrPDB 66 4e-11
2LKD-A nrPDB 61 9e-10
3PR1-A nrPDB 61 1e-09
1SUL-A nrPDB 61 2e-09
5J8B-z nrPDB 56 3e-08
4ZU9-A nrPDB 55 6e-08
3J4J-A nrPDB 55 7e-08
4KJZ-A nrPDB 54 1e-07
4B44-A nrPDB 54 1e-07
4V0N-A nrPDB 53 2e-07
1ZO1-I nrPDB 51 9e-07
4AC9-A nrPDB 51 9e-07
4DHE-A nrPDB 50 1e-06
1PUJ-A nrPDB 50 1e-06
2EW1-A nrPDB 50 2e-06
1ZC4-A nrPDB 50 2e-06
3JCN-b nrPDB 49 3e-06
5UCV-A nrPDB 49 3e-06
4BAS-A nrPDB 49 4e-06
2G77-B nrPDB 49 4e-06
1Z06-A nrPDB 49 4e-06
1M2O-B nrPDB 49 6e-06
6G12-A nrPDB 48 7e-06
6GNI-B nrPDB 48 7e-06
2D74-A nrPDB 48 8e-06
2YWH-A nrPDB 48 1e-05
5YT0-A nrPDB 47 1e-05
4NCL-A nrPDB 47 1e-05
4N3G-A nrPDB 47 1e-05
5DE3-A nrPDB 47 1e-05
5FG3-A nrPDB 47 1e-05
4NCF-A nrPDB 47 1e-05
4UJC-AB nrPDB 47 1e-05
4M9Q-A nrPDB 47 1e-05
2G6B-A nrPDB 47 1e-05
4V8Y-CP nrPDB 47 1e-05
5IMR-C nrPDB 47 2e-05
6IYB-A nrPDB 47 2e-05
4UJ4-A nrPDB 47 2e-05
3WBI-A nrPDB 47 2e-05
3EC1-A nrPDB 47 2e-05
5DI3-B nrPDB 47 2e-05
5FBL-B nrPDB 46 2e-05
4TN1-B nrPDB 46 3e-05
3RWM-B nrPDB 46 3e-05
2KE5-A nrPDB 46 3e-05
4V8Z-CV nrPDB 46 3e-05
2F9L-A nrPDB 46 3e-05
3CPJ-B nrPDB 46 3e-05
1F6B-A nrPDB 46 4e-05
2ATV-A nrPDB 45 4e-05
3H2Y-A nrPDB 45 4e-05
3BH6-A nrPDB 45 5e-05
5CM8-B nrPDB 45 6e-05
1G7S-A nrPDB 45 7e-05
6N8J-m nrPDB 45 7e-05
2H57-A nrPDB 45 7e-05
6FT6-s nrPDB 45 8e-05
3T5D-A nrPDB 45 8e-05
2GAO-A nrPDB 44 1e-04
1PUI-A nrPDB 44 1e-04
4ZI3-A nrPDB 44 2e-04
5T62-W nrPDB 43 2e-04
6N8N-W nrPDB 43 2e-04
1YZU-A nrPDB 43 2e-04
5LZD-z nrPDB 43 2e-04
3CBQ-A nrPDB 43 2e-04
1YVD-A nrPDB 43 2e-04
5LEF-A nrPDB 43 3e-04
2QAG-C nrPDB 42 3e-04
6O62-A nrPDB 42 4e-04
5UB8-A nrPDB 42 4e-04
3DEF-A nrPDB 42 5e-04
2IL1-A nrPDB 42 7e-04
1Z0F-A nrPDB 42 7e-04
5SZI-A nrPDB 41 9e-04
1KSG-A nrPDB 41 0.001
3CPH-A nrPDB 41 0.001
4LHX-A nrPDB 41 0.001
3CNO-A nrPDB 41 0.001
3BFK-A nrPDB 40 0.001
4DJT-A nrPDB 40 0.001
1X3S-A nrPDB 40 0.002
6HLU-A nrPDB 40 0.002
2FFQ-A nrPDB 40 0.002
2AL7-A nrPDB 40 0.002
2G3Y-A nrPDB 40 0.002
3Q85-A nrPDB 40 0.002
3DPU-A nrPDB 40 0.003
2OCY-C nrPDB 40 0.003
2GIL-A nrPDB 39 0.003
5A9Z-CA nrPDB 39 0.003
2YC4-C nrPDB 39 0.003
3T1O-A nrPDB 39 0.004
2CJW-A nrPDB 39 0.004
1ZBD-A nrPDB 39 0.004
3PEN-A nrPDB 39 0.004
3TSO-A nrPDB 39 0.005
3Q72-A nrPDB 39 0.005
2QPT-A nrPDB 39 0.005
1S0U-A nrPDB 39 0.006
6IF2-B nrPDB 39 0.006
3CUE-F nrPDB 38 0.007
5EE5-B nrPDB 38 0.007
1Z22-A nrPDB 38 0.007
4ARZ-A nrPDB 38 0.008
5LZY-jj nrPDB 38 0.010
6BBQ-A nrPDB 38 0.010
5MVF-A nrPDB 38 0.010
2H16-A nrPDB 38 0.010
2P5S-A nrPDB 37 0.012
5NZV-F nrPDB 37 0.013
6DFF-C nrPDB 37 0.014
4ILE-A nrPDB 37 0.014
4WNR-A nrPDB 37 0.015
5KU1-A nrPDB 37 0.015
3LRP-A nrPDB 37 0.015
5LDD-C nrPDB 37 0.017
1J2J-A nrPDB 37 0.017
6CUM-A nrPDB 37 0.017
4U5X-A nrPDB 37 0.018
3JB9-B nrPDB 37 0.021
5NO4-Z nrPDB 37 0.022
4V5G-AZ nrPDB 37 0.023
3BWD-D nrPDB 37 0.023
1ZUN-B nrPDB 37 0.023
1YZG-A nrPDB 36 0.024
2B6H-A nrPDB 36 0.024
5W75-A nrPDB 36 0.027
2YKR-W nrPDB 36 0.027
1EK0-A nrPDB 36 0.034
2QAG-B nrPDB 36 0.037
1YZN-A nrPDB 36 0.038
6FAE-B nrPDB 36 0.039
5CYO-A nrPDB 36 0.039
3RAB-A nrPDB 36 0.039
3O47-A nrPDB 36 0.039
4WA7-A nrPDB 36 0.040
4J0Q-A nrPDB 35 0.041
4V6V-A1 nrPDB 35 0.042
1WDT-A nrPDB 35 0.045
5XR6-A nrPDB 35 0.048
3P27-A nrPDB 35 0.048
1U0L-A nrPDB 35 0.049
5KCS-1w nrPDB 35 0.050
4PHF-A nrPDB 35 0.052
4A2I-V nrPDB 35 0.053
3D6T-B nrPDB 35 0.054
3IZQ-1 nrPDB 35 0.059
4ZV4-A nrPDB 35 0.060
4V89-AW nrPDB 35 0.060
2WBL-C nrPDB 35 0.064
1Z6X-A nrPDB 35 0.071
3CB4-D nrPDB 35 0.080
4RKE-A nrPDB 35 0.085
2NZJ-A nrPDB 34 0.093
1EFM-A nrPDB 34 0.094
3AQ4-A nrPDB 34 0.098
3ZZ0-A nrPDB 34 0.099
5UF8-A nrPDB 34 0.10
5WDQ-A nrPDB 34 0.10
4KU4-A nrPDB 34 0.11
3T5G-A nrPDB 34 0.11
3IHW-A nrPDB 34 0.11
5HCI-A nrPDB 34 0.11
4RKF-A nrPDB 34 0.12
3LXX-A nrPDB 34 0.13
6C2V-A nrPDB 34 0.13
3NXS-A nrPDB 34 0.14
2NTY-C nrPDB 34 0.14
5VH6-A nrPDB 34 0.15
2RHD-A nrPDB 34 0.15
5KSO-A nrPDB 34 0.15
3TR5-A nrPDB 34 0.16
5JSZ-B nrPDB 34 0.17
3FVQ-A nrPDB 33 0.20
3DZ8-A nrPDB 33 0.21
2C4R-L nrPDB 33 0.23
6GDG-D nrPDB 33 0.25
4YPL-A nrPDB 33 0.25
5SZJ-A nrPDB 33 0.25
5W7Q-A nrPDB 33 0.28
6MTD-v nrPDB 33 0.28
4JYC-A nrPDB 33 0.29
3OES-A nrPDB 33 0.30
5LPN-A nrPDB 33 0.31
4DXA-A nrPDB 33 0.33
2GF9-A nrPDB 33 0.34
6QUZ-A nrPDB 32 0.34
5TY0-A nrPDB 32 0.34
1Z0A-A nrPDB 32 0.37
4M8N-E nrPDB 32 0.39
4YPN-A nrPDB 32 0.42
1ECX-A nrPDB 32 0.45
2HF8-A nrPDB 32 0.46
5SZH-B nrPDB 32 0.47
1QZX-A nrPDB 32 0.48
3VQT-A nrPDB 32 0.49
2A5J-A nrPDB 32 0.52
4Q7K-A nrPDB 32 0.54
1MOZ-A nrPDB 32 0.54
5L3S-A nrPDB 32 0.56
5W76-A nrPDB 32 0.66
4FMC-F nrPDB 32 0.67
3L0I-B nrPDB 32 0.67
3TK1-A nrPDB 31 0.76
5WDR-A nrPDB 31 0.83
1J8M-F nrPDB 31 0.86
3MD0-A nrPDB 31 0.97
6N0I-A nrPDB 31 0.98
2QAG-A nrPDB 31 1.0
2B7C-A nrPDB 31 1.0
1D5C-A nrPDB 31 1.1
1RYH-A nrPDB 31 1.1
5AR1-A nrPDB 31 1.1
1FNN-A nrPDB 31 1.1
1YR7-A nrPDB 31 1.1
5JBH-O nrPDB 31 1.1
6N8P-A nrPDB 31 1.3
6CS8-A nrPDB 31 1.3
5IZL-A nrPDB 31 1.3
2P8Y-T nrPDB 31 1.3
2X77-A nrPDB 30 1.3
4F4J-A nrPDB 30 1.4
5EUM-A nrPDB 30 1.5
5C1S-A nrPDB 30 1.5
3FTQ-A nrPDB 30 1.6
2YV5-A nrPDB 30 1.6
4XGC-D nrPDB 30 1.7
1T9H-A nrPDB 30 1.7
5OWV-A nrPDB 30 1.8
3B5X-A nrPDB 30 1.8
3OET-A nrPDB 30 1.9
6G79-A nrPDB 30 2.2
6FGZ-A nrPDB 30 2.3
4LV5-B nrPDB 30 2.3
4OI0-A nrPDB 30 2.3
5T3O-A nrPDB 30 2.4
3PIR-A nrPDB 30 2.4
3MMP-A nrPDB 30 2.4
3M6A-A nrPDB 30 2.5
3CON-A nrPDB 30 2.5
4KV9-A nrPDB 30 2.6
5UHV-A nrPDB 30 2.6
5ZLU-EE nrPDB 30 2.9
5GKO-A nrPDB 29 3.1
4Z54-A nrPDB 29 3.1
2QOR-A nrPDB 29 3.3
3RAP-R nrPDB 29 3.4
4RG8-A nrPDB 29 3.6
4MKI-B nrPDB 29 3.6
5ZHX-e nrPDB 29 3.8
3CRV-A nrPDB 29 3.8
1WMS-A nrPDB 29 4.1
5JCP-B nrPDB 29 4.3
4V6W-Az nrPDB 29 4.3
5C2K-A nrPDB 29 4.3
1MJ1-A nrPDB 29 4.5
2IW3-A nrPDB 29 4.6
6HA8-V nrPDB 29 4.7
3ZJC-A nrPDB 29 4.7
1JNY-A nrPDB 29 4.8
4FN5-A nrPDB 29 4.9
3JBN-AL nrPDB 29 4.9
4NKR-A nrPDB 29 5.0
3RYT-C nrPDB 29 5.3
2V1U-A nrPDB 29 5.4
1IY1-A nrPDB 29 5.5
3T34-A nrPDB 29 5.7
6BZR-B nrPDB 28 6.5
5NIK-J nrPDB 28 6.8
2FN4-A nrPDB 28 7.0
2P67-A nrPDB 28 7.1
3C5C-A nrPDB 28 7.2
5TV4-A nrPDB 28 7.6
5GAD-l nrPDB 28 8.1
5AZS-A nrPDB 28 8.9
3GD7-A nrPDB 28 9.0
2W6D-A nrPDB 28 9.0
3L6X-A nrPDB 28 9.1
2VE7-C nrPDB 28 9.1
5XG2-A nrPDB 28 9.7
>5ZZM-A nrPDB
Length = 426
Score = 627 bits (1617), Expect = e-180, Method: Composition-based stats.
Identities = 426/426 (100%), Positives = 426/426 (100%)
Query: 1 MFDRYDAGEQAVLVHIYFTQDKDMEDLQEFESLVSSAGVEALQVITGSRKAPHPKYFVGE 60
MFDRYDAGEQAVLVHIYFTQDKDMEDLQEFESLVSSAGVEALQVITGSRKAPHPKYFVGE
Sbjct: 1 MFDRYDAGEQAVLVHIYFTQDKDMEDLQEFESLVSSAGVEALQVITGSRKAPHPKYFVGE 60
Query: 61 GKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECRVIDRTGLILDIFAQRARTHEG 120
GKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECRVIDRTGLILDIFAQRARTHEG
Sbjct: 61 GKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECRVIDRTGLILDIFAQRARTHEG 120
Query: 121 KLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQLETDRRLLRNRIVQIQSRLER 180
KLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQLETDRRLLRNRIVQIQSRLER
Sbjct: 121 KLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQLETDRRLLRNRIVQIQSRLER 180
Query: 181 VEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRID 240
VEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRID
Sbjct: 181 VEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRID 240
Query: 241 VADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNT 300
VADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNT
Sbjct: 241 VADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNT 300
Query: 301 VLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTER 360
VLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTER
Sbjct: 301 VLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTER 360
Query: 361 LSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEEDGSVSLQVRMPIVDWRRLCKQEPA 420
LSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEEDGSVSLQVRMPIVDWRRLCKQEPA
Sbjct: 361 LSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEEDGSVSLQVRMPIVDWRRLCKQEPA 420
Query: 421 LIDYLI 426
LIDYLI
Sbjct: 421 LIDYLI 426
>2QTH-A nrPDB
Length = 364
Score = 316 bits (809), Expect = 1e-86, Method: Composition-based stats.
Identities = 89/321 (27%), Positives = 169/321 (52%), Gaps = 20/321 (6%)
Query: 50 KAPHPKYFVGEGKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECR-VIDRTGLIL 108
K+P+ K+++ K +I + +++++F+ L P N+ R + + V+D+ L+L
Sbjct: 35 KSPNVKFYIQYDKLQQIKNDEEI--STLIIFEQ-LKPRHFINIRRELKGKEVLDKILLLL 91
Query: 109 DIFAQRARTHEGKLQVELAQLRHLATRLVRGWTH--LERQKGGIGLRGPGETQLETDRRL 166
+IFA A + E K+Q+ELA+L++ + +T + Q+G +G G +E+ +
Sbjct: 92 EIFALHAGSKEAKMQIELARLKYELPIIKETYTKSKIGEQQGPLG---AGTYGVESTIKF 148
Query: 167 LRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAAD 226
+ RI ++ LE ++ +E+ +S + ++P++ +VGYTN+GK++LFN +T
Sbjct: 149 YKRRINKLMKELESIKIFKEKSIESNKRNNIPSIGIVGYTNSGKTSLFNSLTGLTQKVDT 208
Query: 227 QLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDA 286
+LF T+ P I + + + +L DTVGFIR +P +V AF TL E + + L+ VID+
Sbjct: 209 KLFTTMSPKRYAIPINN-RKIMLVDTVGFIRGIPPQIVDAFFVTLSEAKYSDALILVIDS 267
Query: 287 --ADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLE-DFEPRIDRDEENKPNRV--- 340
++ + E +++ +L EI P L+ +NKID + D ++D E+
Sbjct: 268 TFSENLLIETLQSSFEILREIGVSGKPILVTLNKIDKINGDLYKKLDLVEKLSKELYSPI 327
Query: 341 ----WLSAQTGAGIPQLFQAL 357
+SA + L +
Sbjct: 328 FDVIPISALKRTNLELLRDKI 348
>1LNZ-A nrPDB
Length = 342
Score = 158 bits (400), Expect = 4e-39, Method: Composition-based stats.
Identities = 52/197 (26%), Positives = 94/197 (47%), Gaps = 19/197 (9%)
Query: 180 RVEKQREQGRQSRIKADV---PTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTL 236
++ + E G++ I ++ V LVG+ + GKSTL + ++ A+ AD F TL P L
Sbjct: 138 QLSENGEPGKERYIVLELKVLADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNL 197
Query: 237 RRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIE 296
++ D V+AD G I H V L+ + +++HVID + + ++ +
Sbjct: 198 GMVETDDGRSFVMADLPGLIEGA-HQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYD 256
Query: 297 AVNTVLEEIDAHEI-----PTLLVMNKIDM------LEDFEPRIDRDEENKPNRVWLSAQ 345
T+ +E+ + + P ++V NK+DM LE F+ ++ D P +SA
Sbjct: 257 DYLTINQELSEYNLRLTERPQIIVANKMDMPEAAENLEAFKEKLTDDYPVFP----ISAV 312
Query: 346 TGAGIPQLFQALTERLS 362
T G+ +L + +L
Sbjct: 313 TREGLRELLFEVANQLE 329
>5DN8-A nrPDB
Length = 446
Score = 153 bits (386), Expect = 1e-37, Method: Composition-based stats.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 33/216 (15%)
Query: 200 VSLVGYTNAGKSTLFNRITE-ARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRH 258
++++G N GKSTL NR+ RV DQ T D D T L DT G R
Sbjct: 181 IAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYT-LIDTAGIRRR 239
Query: 259 LP-HDLVAAF--KATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLV 315
D V F +LQ A +++ ++DA ++++ +N ++E + ++
Sbjct: 240 AKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEA----GVSLIIA 295
Query: 316 MNKIDML-----EDFEPRIDRDEE--NKPNRVWLSAQTGAGIPQLFQA------------ 356
+NK D L ++ IDR + R ++SA G G+ +LF+A
Sbjct: 296 VNKWDGLNIEERDNVRNAIDRRMPFVDFARRYFISALHGTGVGKLFRAIQESYQSIQQEL 355
Query: 357 ----LTERLSGEVAQHTLRLPPQEGRLRSRFYQLQA 388
LT L VA+H L + R+R R+ L A
Sbjct: 356 TTGQLTRALEKAVAEHEPPLV-KGRRIRLRYAHLGA 390
Score = 104 bits (260), Expect = 6e-23, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 7/168 (4%)
Query: 197 VPTVSLVGYTNAGKSTLFNRITEAR-VYAADQLFATLDPTLRRIDVADVGETVLADTVGF 255
+P +++VG N GKSTLFN +T++R AD T D + D +L DT G
Sbjct: 5 LPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTI-DSQRLLLVDTGGL 63
Query: 256 IRHLPHDLVAAFKATL-QETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLL 314
+ ++ + + Q ++ +L ++DA V + + E + L
Sbjct: 64 VDTENKEVAPLAETQVEQAIDESDCILFLVDAKAGLVPAD----EIIAERLRKKGKKIFL 119
Query: 315 VMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLS 362
+NK D + D + ++A +G G+ L + E L
Sbjct: 120 AVNKADRARAAVVQSDFYKLGFGEPYVIAAASGRGVKDLMTQVLENLP 167
>2E87-A nrPDB
Length = 357
Score = 152 bits (385), Expect = 2e-37, Method: Composition-based stats.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 24/230 (10%)
Query: 161 ETDRRLLRNR---IVQIQSRLERVEKQREQGRQ-SRIKADVPTVSLVGYTNAGKSTLFNR 216
E R+ + I RL + K RE + + ++PTV + G+ N GKSTL
Sbjct: 127 ELRRQFYGRVASVLRDIDDRLRYLNKAREVLKDLPVVDLEIPTVVIAGHPNVGKSTLLKA 186
Query: 217 ITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI-RHLPHDLVAAFKATLQETR 275
+T A+ A F T + + + + DT G + R + +A L
Sbjct: 187 LTTAKPEIASYPFTTRGINVGQFE-DGYFRYQIIDTPGLLDRPISERNEIEKQAILALRY 245
Query: 276 QATLLLHVIDAAD---VRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRD 332
L++++ D ++ ++E I V E ++P L+V+NKID+ + E I R
Sbjct: 246 LGNLIIYIFDPSEHCGFPLEEQIHLFEEVHGEF--KDLPFLVVINKIDVAD--EENIKRL 301
Query: 333 E----ENKPNRVWLSAQTGAGIP-------QLFQALTERLSGEVAQHTLR 371
E E N + +SA G GI + + L E+++ E + LR
Sbjct: 302 EKFVKEKGLNPIKISALKGTGIDLVKEEIIKTLRPLAEKVAREKIERELR 351
>1UDX-A nrPDB
Length = 416
Score = 151 bits (381), Expect = 5e-37, Method: Composition-based stats.
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 15/188 (7%)
Query: 180 RVEKQREQGRQSRIKAD---VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTL 236
R + E+G + R++ + + V LVGY NAGKS+L +T A A F TL P L
Sbjct: 137 RFAEAGEEGEKRRLRLELMLIADVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNL 196
Query: 237 RRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIE 296
++V++ LAD G I + L+ + +LL+V+DAAD E ++
Sbjct: 197 GVVEVSEEERFTLADIPGIIEGASEGKGLGLE-FLRHIARTRVLLYVLDAAD----EPLK 251
Query: 297 AVNTVLEEIDAHEI-----PTLLVMNKIDMLEDFEPRIDRDEENKPNRV--WLSAQTGAG 349
+ T+ +E+ A++ P+L+ +NK+D+LE+ + D + +SA TGAG
Sbjct: 252 TLETLRKEVGAYDPALLRRPSLVALNKVDLLEEEAVKALADALAREGLAVLPVSALTGAG 311
Query: 350 IPQLFQAL 357
+P L +AL
Sbjct: 312 LPALKEAL 319
>4CSU-9 nrPDB
Length = 390
Score = 142 bits (359), Expect = 2e-34, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 12/205 (5%)
Query: 198 PTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIR 257
V ++G NAGKST ++ A+ AD F TL P+L + + + V+AD G I
Sbjct: 160 ADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIE 219
Query: 258 HLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHE-----IPT 312
L+ + +LLH+ID + + +E ++ E++ + P
Sbjct: 220 GAAEGAGLGI-RFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278
Query: 313 LLVMNKIDMLEDF--EPRIDRDEENK---PNRVWLSAQTGAGIPQL-FQALTERLSGEVA 366
LV NKID+L+ E + E +SA +G G+ L + +T + V
Sbjct: 279 WLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVV 338
Query: 367 QHTLRLPPQEGRLRSRFYQLQAIEK 391
Q P++ Y Q +E+
Sbjct: 339 QAEEAKQPEKVEFMWDDYHRQQLEE 363
>5M04-A nrPDB
Length = 360
Score = 142 bits (357), Expect = 4e-34, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 11/166 (6%)
Query: 198 PTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIR 257
V ++G NAGKST ++ A+ AD F TL P+L + + + V+AD G I
Sbjct: 180 ADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIE 239
Query: 258 HLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHE-----IPT 312
L+ + +LLH+ID + + +E ++ E++ + P
Sbjct: 240 GAAEGAGLGI-RFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 298
Query: 313 LLVMNKIDMLEDF--EPRIDRDEENK---PNRVWLSAQTGAGIPQL 353
LV NKID+L+ E + E +SA +G G+ L
Sbjct: 299 WLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDL 344
>3R9W-A nrPDB
Length = 307
Score = 138 bits (347), Expect = 5e-33, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 12/177 (6%)
Query: 195 ADVPTVSLVGYTNAGKSTLFNRITEARVYAADQL-FATLDPTLRRIDVADVGETVLADTV 253
V V++VG N GKSTL N + +V T L ++ + + + DT
Sbjct: 7 MKVGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIPNEAQIIFLDTP 66
Query: 254 GFIRHLPHDLVAAFKATL--QETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIP 311
G D++ + Q +A ++L +IDA + + E ++ + P
Sbjct: 67 GIYEPKKSDVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPL---NKP 123
Query: 312 TLLVMNKIDML---EDFEPRIDRDEENKPNR---VWLSAQTGAGIPQLFQALTERLS 362
++V+NKID + ++ P ID + P V +SA GA + +L + + + L
Sbjct: 124 VIVVINKIDKIGPAKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLP 180
>1XZP-A nrPDB
Length = 482
Score = 137 bits (345), Expect = 9e-33, Method: Composition-based stats.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 22/199 (11%)
Query: 173 QIQSRLERVEKQREQGRQSRIKADVPT-------VSLVGYTNAGKSTLFNR-ITEARVYA 224
++ +RLER+ +E+ + KAD + +VG N GKSTL NR + E R
Sbjct: 215 EVVTRLERI---KEKLTEELKKADAGILLNRGLRMVIVGKPNVGKSTLLNRLLNEDRAIV 271
Query: 225 ADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVA--AFKATLQETRQATLLLH 282
D T D I + + + DT G +R +DLV + TLQE +A ++L
Sbjct: 272 TDIPGTTRDVISEEIVIRGI-LFRIVDTAG-VRSETNDLVERLGIERTLQEIEKADIVLF 329
Query: 283 VIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDF-EPRIDRDEENKPNRVW 341
V+DA+ +E+ + + + L+V+NK+D++E E I + V
Sbjct: 330 VLDASSPLDEEDRKILERI------KNKRYLVVINKVDVVEKINEEEIKNKLGTDRHMVK 383
Query: 342 LSAQTGAGIPQLFQALTER 360
+SA G G+ +L +++
Sbjct: 384 ISALKGEGLEKLEESIYRE 402
>1WF3-A nrPDB
Length = 301
Score = 132 bits (331), Expect = 4e-31, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 73/181 (40%), Gaps = 20/181 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
V++VG N GKSTL N + +V T LR I + V DT G H
Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGL--HK 67
Query: 260 PHDLVAAFKATLQETRQA----TLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLV 315
P D + F QE +A ++ V+D E+ E V L+ + ++P LLV
Sbjct: 68 PMDALGEFMD--QEVYEALADVNAVVWVVDLRHPPTPED-ELVARALKPL-VGKVPILLV 123
Query: 316 MNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQ 375
NK+D + E + E P P++ AL ER E+ L L P+
Sbjct: 124 GNKLDAAKYPEEAMKAYHELLPE----------AEPRMLSALDERQVAELKADLLALMPE 173
Query: 376 E 376
Sbjct: 174 G 174
>3J8G-X nrPDB
Length = 490
Score = 130 bits (327), Expect = 1e-30, Method: Composition-based stats.
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 10/165 (6%)
Query: 197 VPTVSLVGYTNAGKSTLFNRITEAR-VYAADQLFATLDPTLRRIDVADVGETVLADTVGF 255
VP V+LVG N GKSTLFNR+T R AD T D R ++ + E + DT G
Sbjct: 2 VPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEI-EGREFICIDTGGI 60
Query: 256 IRHLPHDLVAAFK--ATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTL 313
D V +L +A ++L ++DA + + + + + + E PT
Sbjct: 61 --DGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPAD----EAIAKHLRSREKPTF 114
Query: 314 LVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALT 358
LV NK D L+ + +D ++A G G+ L + +
Sbjct: 115 LVANKTDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVL 159
Score = 117 bits (294), Expect = 7e-27, Method: Composition-based stats.
Identities = 54/215 (25%), Positives = 91/215 (42%), Gaps = 31/215 (14%)
Query: 200 VSLVGYTNAGKSTLFNR-ITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI-R 257
+++VG N GKSTL NR + E RV D T D ++ D E VL DT G R
Sbjct: 205 LAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPME-RDGREYVLIDTAGVRKR 263
Query: 258 HLPHDLVAAF--KATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLV 315
D V F TLQ A +++ VIDA + +++ + +L ++V
Sbjct: 264 GKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLGFIL----NSGRSLVIV 319
Query: 316 MNKIDML-----EDFEPRIDRDEE--NKPNRVWLSAQTGAGIPQLFQAL-------TERL 361
+NK D L E + +D + ++SA G+G+ LF+++ T R+
Sbjct: 320 VNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRV 379
Query: 362 SGEVAQHTLRL------PP--QEGRLRSRFYQLQA 388
+ + + PP + R++ ++
Sbjct: 380 GTSMLTRIMTMAVEDHQPPLVRGRRVKLKYAHAGG 414
>1MKY-A nrPDB
Length = 439
Score = 116 bits (291), Expect = 2e-26, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 11/171 (6%)
Query: 197 VPTVSLVGYTNAGKSTLFNRI-TEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGF 255
+ TV +VG N GKSTLFN++ + + D+ T DP ++ L DT G
Sbjct: 1 MATVLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYG-KTFKLVDTCGV 59
Query: 256 IRHLPHDLVA--AFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTL 313
+ P D+++ + TL R+A L+L V+D +E+ ++ + + + T+
Sbjct: 60 FDN-PQDIISQKMKEVTLNMIREADLVLFVVDGKRGITKED----ESLADFLRKSTVDTI 114
Query: 314 LVMNKIDMLEDFEPRID--RDEENKPNRVWLSAQTGAGIPQLFQALTERLS 362
LV NK + L +FE + + +SA+ + + + + ++L
Sbjct: 115 LVANKAENLREFEREVKPELYSLGFGEPIPVSAEHNINLDTMLETIIKKLE 165
Score = 102 bits (255), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/204 (21%), Positives = 85/204 (41%), Gaps = 23/204 (11%)
Query: 172 VQIQSRLERV-EKQREQGRQSRIKADVPT---VSLVGYTNAGKSTLFNR-ITEARVYAAD 226
+ + + LE + +K E+G K ++ V++VG N GKSTLFN + + R +
Sbjct: 151 INLDTMLETIIKKLEEKGLDLESKPEITDAIKVAIVGRPNVGKSTLFNAILNKERALVSP 210
Query: 227 QLFATLDPTLRRIDVADVGETVLADTVGFIR--HLPHDLVAAFK--ATLQETRQATLLLH 282
T DP + + D + V DT G R + V + + +A +++
Sbjct: 211 IPGTTRDPVDDEVFI-DGRKYVFVDTAGLRRKSRVEPRTVEKYSNYRVVDSIEKADVVVI 269
Query: 283 VIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPN---- 338
V+DA +++ + ++ +++V NK D++ E R D +
Sbjct: 270 VLDATQGITRQD----QRMAGLMERRGRASVVVFNKWDLVVHREKRYDEFTKLFREKLYF 325
Query: 339 -----RVWLSAQTGAGIPQLFQAL 357
++ SA G I ++ A+
Sbjct: 326 IDYSPLIFTSADKGWNIDRMIDAM 349
>5EE0-A nrPDB
Length = 395
Score = 111 bits (277), Expect = 7e-25, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 26/162 (16%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-------------- 245
+ +VG N GKST FN +T+ + A + F T+DP R+ V D
Sbjct: 28 IGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQLYKPKSEV 87
Query: 246 --ETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAAD-------VRVQENIE 296
+ D G +R H A L R + HV+ A + + +
Sbjct: 88 SAYLEINDIAGLVRGA-HAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHIDDSVDPVR 146
Query: 297 AVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPN 338
+ T+ EE+ +I V NKID LE R + + +
Sbjct: 147 DLETIGEELRLKDIE--FVQNKIDDLEKSMKRSNDKQLKLEH 186
>5X4B-A nrPDB
Length = 162
Score = 109 bits (272), Expect = 3e-24, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 6/163 (3%)
Query: 198 PTVSLVGYTNAGKSTLFNRITEARV-YAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256
P V++VG N GKST+FNRI R+ D T D + + + L DT G
Sbjct: 3 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNY-DFNLIDTGGID 61
Query: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVM 316
L + +A +++ +++ + + V + + + P +L +
Sbjct: 62 IGDEPFLAQIRQQAEIAMDEADVIIFMVNGREGVTAAD----EEVAKILYRTKKPVVLAV 117
Query: 317 NKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTE 359
NK+D E D +S G G+ L A+ E
Sbjct: 118 NKLDNTEMRANIYDFYSLGFGEPYPISGTHGLGLGDLLDAVAE 160
>4DCU-A nrPDB
Length = 456
Score = 108 bits (269), Expect = 5e-24, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 6/163 (3%)
Query: 198 PTVSLVGYTNAGKSTLFNRITEARV-YAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256
P V++VG N GKST+FNRI R+ D T D + + + L DT G
Sbjct: 24 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNY-DFNLIDTGGID 82
Query: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVM 316
L + +A +++ +++ + + V + + + P +L +
Sbjct: 83 IGDEPFLAQIRQQAEIAMDEADVIIFMVNGREGVTAAD----EEVAKILYRTKKPVVLAV 138
Query: 317 NKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTE 359
NK+D E D +S G G+ L A+ E
Sbjct: 139 NKLDNTEMRANIYDFYSLGFGEPYPISGTHGLGLGDLLDAVAE 181
Score = 78.6 bits (192), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 79/198 (39%), Gaps = 18/198 (9%)
Query: 176 SRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNR-ITEARVYAADQLFATLDP 234
L+ V + + +++ +V L+G N GKS+L N + E RV ++ T D
Sbjct: 174 DLLDAVAEHFKNIPETKYNEEVIQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDA 233
Query: 235 TLRRIDVADVGETVLADTVGFI-RHLPHDLVAAF--KATLQETRQATLLLHVIDAADVRV 291
E V+ DT G + ++ + L+ ++ ++ V+D + +
Sbjct: 234 VDTSFTYNQ-QEFVIVDTAGMRKKGKVYETTEKYSVLRALKAIDRSEVVAVVLDGEEGII 292
Query: 292 QENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPN---------RVWL 342
+++ E ++V+NK D ++ E + EEN + +++
Sbjct: 293 EQDKRIAGYAHEA----GKAVVIVVNKWDAVDKDESTMKEFEENIRDHFQFLDYAPILFM 348
Query: 343 SAQTGAGIPQLFQALTER 360
SA T I L A+ +
Sbjct: 349 SALTKKRIHTLMPAIIKA 366
>2WIC-A nrPDB
Length = 267
Score = 105 bits (262), Expect = 3e-23, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 20/179 (11%)
Query: 199 TVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLR-------RIDVADVGETVLAD 251
TV L+G N+GK+TLFN++T AR + T++ ++ + D+ T
Sbjct: 5 TVGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGIFATTDHQVTLVDLPGTYSLT 64
Query: 252 TVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIP 311
T+ L + + + A +L++V+DA+ N+E + ++ IP
Sbjct: 65 TISSQTSLDEQIACHYILS----GDADMLINVVDAS------NLERNLYLTLQLLELGIP 114
Query: 312 TLLVMNKIDMLEDFEPRIDRDEENKP---NRVWLSAQTGAGIPQLFQALTERLSGEVAQ 367
++ +N +D+ E + RID D + L + G GI L AL + +
Sbjct: 115 CVVALNMLDIAEKQQVRIDIDALAARLGCPVIPLVSTRGRGIEALKIALDRHQANSDLE 173
>2OHF-A nrPDB
Length = 396
Score = 98.6 bits (244), Expect = 5e-21, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 26/152 (17%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVL---------- 249
+ +VG N GKST FN +T ++ A + F T+DP R+ V D L
Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84
Query: 250 ------ADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQ-------ENIE 296
D G ++ H+ A L + H+ A + + I
Sbjct: 85 PAFLNVVDIAGLVKGA-HNGQGLGNAFLSHISACDGIFHLTRAFEDDDITHVEGSVDPIR 143
Query: 297 AVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPR 328
+ + EE+ + + + ID LE R
Sbjct: 144 DIEIIHEELQLKDEEMIGPI--IDKLEKVAVR 173
>3GEH-A nrPDB
Length = 462
Score = 98.3 bits (243), Expect = 5e-21, Method: Composition-based stats.
Identities = 50/198 (25%), Positives = 77/198 (38%), Gaps = 11/198 (5%)
Query: 171 IVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEA-RVYAADQLF 229
I I + + ++ +++G R V++VG N GKS+L N +++ R D
Sbjct: 201 IENIAAEISQLLATKDKGELLRTGLK---VAIVGRPNVGKSSLLNAWSQSDRAIVTDLPG 257
Query: 230 ATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADV 289
T D ++ V + + DT G + + Q A L+L IDAA
Sbjct: 258 TTRDVVESQLVVGGIP-VQVLDTAGIRETSDQVEKIGVERSRQAANTADLVLLTIDAATG 316
Query: 290 RVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAG 349
+ E V P +LVMNKID++E EN V +A G
Sbjct: 317 WTTGDQEIYEQV------KHRPLILVMNKIDLVEKQLITSLEYPENITQIVHTAAAQKQG 370
Query: 350 IPQLFQALTERLSGEVAQ 367
I L A+ E + Q
Sbjct: 371 IDSLETAILEIVQTGKVQ 388
>2WJG-A nrPDB
Length = 188
Score = 95.6 bits (236), Expect = 4e-20, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 73/177 (41%), Gaps = 11/177 (6%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
++L+G N GKST+FN +T VY + T++ + + + + D G
Sbjct: 10 IALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEY-NGEKFKVVDLPGVYSLT 68
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKI 319
+ + + L+++++DA +E + ++ LL +NK+
Sbjct: 69 ANSIDEIIARDYIINEKPDLVVNIVDATA------LERNLYLTLQLMEMGANLLLALNKM 122
Query: 320 DMLEDFEPRIDRDEE---NKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLP 373
D+ + ID D+ V LSA GI +L +A++ + + ++ P
Sbjct: 123 DLAKSLGIEIDVDKLEKILGVKVVPLSAAKKMGIEELKKAISIAV-KDKKTAEIKYP 178
>2DYK-A nrPDB
Length = 161
Score = 95.6 bits (236), Expect = 4e-20, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 64/165 (38%), Gaps = 9/165 (5%)
Query: 200 VSLVGYTNAGKSTLFNRITEAR-VYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRH 258
V +VG N GKS+LFNR+ + R AD T D ++ D G +L DT G
Sbjct: 4 VVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVET-DRGRFLLVDTGGLWSG 62
Query: 259 LP-HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMN 317
+ + A ++L +D Q + E + P +LV
Sbjct: 63 DKWEKKIQEKVD--RALEDAEVVLFAVDGRAELTQADYEVAEY----LRRKGKPVILVAT 116
Query: 318 KIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLS 362
K+D + + + S++ G+ +L +A+ ERL
Sbjct: 117 KVDDPKHELYLGPLYGLGFGDPIPTSSEHARGLEELLEAIWERLP 161
>4R98-A nrPDB
Length = 271
Score = 95.6 bits (236), Expect = 4e-20, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 73/181 (40%), Gaps = 17/181 (9%)
Query: 199 TVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLR-------RIDVADVGETVLAD 251
T+ L+G N+GK+TLFN++T +R + T++ ++ + D+ T
Sbjct: 5 TIGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFSTTDHQVTLVDLPGTYSLT 64
Query: 252 TVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIP 311
T+ L + + + A LL++V+DA+ N+E + ++ IP
Sbjct: 65 TISSQTSLDEQIACHYILS----GDADLLINVVDAS------NLERNLYLTLQLLELGIP 114
Query: 312 TLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLR 371
++ +N +D+ E RI+ D + + + L + A +
Sbjct: 115 CIVALNMLDIAEKQNIRIEIDALSARLGCPVIPLVATDTKNVQFVLKLAIDRYKANENVE 174
Query: 372 L 372
L
Sbjct: 175 L 175
>2WJI-A nrPDB
Length = 165
Score = 94.4 bits (233), Expect = 9e-20, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 68/162 (41%), Gaps = 10/162 (6%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
++L+G N GKST+FN +T VY + T++ + + + + D G
Sbjct: 6 IALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEY-NGEKFKVVDLPGVYSLT 64
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKI 319
+ + + L+++++DA +E + ++ LL +NK+
Sbjct: 65 ANSIDEIIARDYIINEKPDLVVNIVDATA------LERNLYLTLQLMEMGANLLLALNKM 118
Query: 320 DMLEDFEPRIDRDEE---NKPNRVWLSAQTGAGIPQLFQALT 358
D+ + ID D+ V LSA GI +L +A++
Sbjct: 119 DLAKSLGIEIDVDKLEKILGVKVVPLSAAKKMGIEELKKAIS 160
>3A1W-A nrPDB
Length = 168
Score = 90.6 bits (223), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 63/167 (37%), Gaps = 10/167 (5%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
V+L G N GK++LFN +T + Y A+ T++ L D G
Sbjct: 8 VALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKGY-TINLIDLPGTYSLG 66
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKI 319
+ A L++ V D+ + E +L EI E +L M I
Sbjct: 67 YSSIDEKIARDYLLKGDADLVILVADSVNP------EQSLYLLLEILEMEKKVILAMTAI 120
Query: 320 DMLEDFEPRIDRDEE---NKPNRVWLSAQTGAGIPQLFQALTERLSG 363
D + +IDR E V+ S+ TG G+ +L + + E
Sbjct: 121 DEAKKTGMKIDRYELQKHLGIPVVFTSSVTGEGLEELKEKIVEYAQK 167
>1JAL-A nrPDB
Length = 363
Score = 90.2 bits (222), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 54/135 (40%), Gaps = 22/135 (16%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
+VG N GKSTLFN +T+A + AA+ F T++P + + D LA+ V R L
Sbjct: 5 CGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERIL 64
Query: 260 P---------------HDLVAAFKATLQETRQATLLLHVIDAADVRV-------QENIEA 297
P L R+ + HV+ + + ++
Sbjct: 65 PTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLDD 124
Query: 298 VNTVLEEIDAHEIPT 312
++T+ E+ ++ +
Sbjct: 125 IDTINTELALADLDS 139
>3LX8-A nrPDB
Length = 272
Score = 89.4 bits (220), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/190 (21%), Positives = 79/190 (41%), Gaps = 13/190 (6%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
++L+G N+GK++LFN IT + T++ + + + D G
Sbjct: 6 IALIGNPNSGKTSLFNLITGHNQRVGNWPGVTVERKSGLVKKN--KDLEIQDLPGIYSMS 63
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKI 319
P+ +++A +L+V+DA N+E + ++ IP + +N I
Sbjct: 64 PYSPEEKVARDYLLSQRADSILNVVDAT------NLERNLYLTTQLIETGIPVTIALNMI 117
Query: 320 DMLEDFEPRIDRDEENKPNRVWL---SAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQE 376
D+L+ +I+ D+ + V + SA G+ Q+ + + V L P +
Sbjct: 118 DVLDGQGKKINVDKLSYHLGVPVVATSALKQTGVDQVVKKAAHTTTSTVGD--LAFPIYD 175
Query: 377 GRLRSRFYQL 386
RL + Q+
Sbjct: 176 DRLEAAISQI 185
>3A1U-A nrPDB
Length = 258
Score = 89.4 bits (220), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 66/176 (37%), Gaps = 10/176 (5%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
V+L G N GK++LFN +T + Y A+ T++ L D G
Sbjct: 8 VALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKGY-TINLIDLPGTYSLG 66
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKI 319
+ A L++ V D+ + E +L EI E +L M I
Sbjct: 67 YSSIDEKIARDYLLKGDADLVILVADSVNP------EQSLYLLLEILEMEKKVILAMTAI 120
Query: 320 DMLEDFEPRIDRDEE---NKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRL 372
D + +IDR E V+ S+ TG G+ +L + + E H + L
Sbjct: 121 DEAKKTGMKIDRYELQKHLGIPVVFTSSVTGEGLEELKEKIVEYAQKNTILHRMIL 176
>2GJ9-A nrPDB
Length = 172
Score = 88.6 bits (218), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 61/163 (37%), Gaps = 6/163 (3%)
Query: 200 VSLVGYTNAGKSTLFNRITE-ARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRH 258
V + G NAGKS+L N + D T D I + + + DT G
Sbjct: 7 VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMP-LHIIDTAGLREA 65
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
+ QE QA +L ++D + E + + A +P +V NK
Sbjct: 66 SDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAK-LPITVVRNK 124
Query: 319 IDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERL 361
D+ + E N + LSA+TG G+ L L + +
Sbjct: 125 ADI---TGETLGMSEVNGHALIRLSARTGEGVDVLRNHLKQSM 164
>3K53-A nrPDB
Length = 271
Score = 88.6 bits (218), Expect = 5e-18, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 75/170 (44%), Gaps = 9/170 (5%)
Query: 199 TVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRH 258
TV+LVG N GK+T+FN +T R + + T++ ++ + E ++ D G
Sbjct: 5 TVALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGIMEYRE-KEFLVVDLPGIYSL 63
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
H + A +++ ++D+ + + + LE + +LV+NK
Sbjct: 64 TAHSIDELIARNFILDGNADVIVDIVDSTCL-----MRNLFLTLELFEMEVKNIILVLNK 118
Query: 319 IDMLEDFEPRIDR---DEENKPNRVWLSAQTGAGIPQLFQALTERLSGEV 365
D+L+ +ID +E + +A+ G G+ +L + + G+V
Sbjct: 119 FDLLKKKGAKIDIKKMRKELGVPVIPTNAKKGEGVEELKRMIALMAEGKV 168
>3GEE-A nrPDB
Length = 476
Score = 85.9 bits (211), Expect = 3e-17, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 91/258 (35%), Gaps = 26/258 (10%)
Query: 119 EGKLQVELAQLRHLATR---LVRGWTHLERQKGGIGLRGPGETQLETDRRLLRNRIVQIQ 175
+G L V L LR R L+ + R Q+ET LR+ + ++
Sbjct: 166 KGDLSVRLGGLREQLIRSCALIELELDFSEEDVEFQSRDELTMQIET----LRSEVNRLI 221
Query: 176 SRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITE-ARVYAADQLFATLDP 234
+ RI ++ + + G NAGKSTL N + R + T D
Sbjct: 222 DSYQH----------GRIVSEGVSTVIAGKPNAGKSTLLNTLLGQERAIVSHMPGTTRDY 271
Query: 235 TLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQEN 294
+ D L DT G + + + +A L+L+++D E
Sbjct: 272 IEECF-IHDKTMFRLTDTAGLREAGEEIEHEGIRRSRMKMAEADLILYLLD----LGTER 326
Query: 295 IEAVNTVLEEIDAHEIP--TLLVMNKIDMLEDFEPRIDRDE-ENKPNRVWLSAQTGAGIP 351
++ T + E+ A L V NK+D + + I + +SA G GI
Sbjct: 327 LDDELTEIRELKAAHPAAKFLTVANKLDRAANADALIRAIADGTGTEVIGISALNGDGID 386
Query: 352 QLFQALTERLSGEVAQHT 369
L Q + + + H
Sbjct: 387 TLKQHMGDLVKNLDKLHE 404
>2DBY-A nrPDB
Length = 368
Score = 85.5 bits (210), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 64/199 (32%), Gaps = 30/199 (15%)
Query: 199 TVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVL--------- 249
V +VG N GKSTLFN +T A AA+ FAT+D + + + D L
Sbjct: 3 AVGIVGLPNVGKSTLFNALTRANALAANYPFATIDKNVGVVPLEDERLYALQRTFAKGER 62
Query: 250 -----------ADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRV------- 291
D G ++ H L R+ + HV+
Sbjct: 63 VPPVVPTHVEFVDIAGLVKGA-HKGEGLGNQFLAHIREVAAIAHVLRCFPDPDVVHVMGR 121
Query: 292 QENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIP 351
+ +E V E+ ++ TL +++ L L G P
Sbjct: 122 VDPLEDAEVVETELLLADLATL--ERRLERLRKEARADRERLPLLEAAEGLYVHLQEGKP 179
Query: 352 QLFQALTERLSGEVAQHTL 370
+E ++ + + L
Sbjct: 180 ARTFPPSEAVARFLKETPL 198
>3IEU-A nrPDB
Length = 301
Score = 85.5 bits (210), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 68/171 (39%), Gaps = 11/171 (6%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
+++VG N GKSTL N++ ++ + T + I + + DT G
Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEE 70
Query: 260 PHDLV-AAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
+ KA L++ V++ ++ VL ++ + P +L +NK
Sbjct: 71 KRAINRLMNKAASSSIGDVELVIFVVEGTR-WTPDD----EMVLNKLREGKAPVILAVNK 125
Query: 319 IDMLEDFEPRI-----DRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGE 364
+D +++ + + N + V +SA+TG + + + + L
Sbjct: 126 VDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLPEA 176
>5LAD-A nrPDB
Length = 404
Score = 82.8 bits (203), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 71/168 (42%), Gaps = 10/168 (5%)
Query: 200 VSLVGYTNAGKSTLFNRITEARV-YAADQLFATLDPTLRRIDVADVGETVLADTVGFIRH 258
+ + G N GKS+ N + V ++ T DP + +++ VG L DT G
Sbjct: 12 IVVAGRRNVGKSSFMNALVGQNVSIVSEYAGTTTDPVYKSMELYPVGPVTLVDTPGL-DD 70
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
+ + + +A + V D+ ++++ + EIP ++V+NK
Sbjct: 71 VGELGRLRVEKARRVFYRADCGILVTDSEPTPYEDDVVNL------FKEMEIPFVVVVNK 124
Query: 319 IDMLEDFEPRIDRDEENK--PNRVWLSAQTGAGIPQLFQALTERLSGE 364
ID+L + + E++ + +SA G + + ++E L G+
Sbjct: 125 IDVLGEKAEELKGLYESRYEAKVLLVSALQKKGFDDIGKTISEILPGD 172
>5KH0-A nrPDB
Length = 396
Score = 82.5 bits (202), Expect = 4e-16, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 70/167 (41%), Gaps = 11/167 (6%)
Query: 200 VSLVGYTNAGKSTLFNRITEARV-YAADQLFATLDPTLRRIDVADVGETVLADTVGFIRH 258
+++ G N GKS+ N + V ++ T DP + ++++ VG L DT G
Sbjct: 11 IAITGRRNVGKSSFMNALIGQEVSIVSNVAGTTTDPVFKSMELSPVGPITLIDTPGL-DD 69
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
+ + K + +A + ++D +E +++ EIP + +NK
Sbjct: 70 VGELGIKRIKKAKKSLYRADCGILIVDDIPGNFEEQ------IIKLFKELEIPYFIAINK 123
Query: 319 IDMLEDFEPRIDRDEENKPNRV-WLSAQTGAGIPQLFQALTERLSGE 364
ID ++ I+++ + + +SA G ++ + + L +
Sbjct: 124 IDTID--HENIEKEYKKYNVPILKVSALKKIGFEKIGKTINSILPKD 168
>3IBY-A nrPDB
Length = 256
Score = 82.1 bits (201), Expect = 4e-16, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 18/166 (10%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI----- 256
L+G N GK+TLFN +T A + T++ + + D G
Sbjct: 6 LIGNPNCGKTTLFNALTNANQRVGNWPGVTVEKKTGEFLL-GEHLIEITDLPGVYSLVAN 64
Query: 257 -RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLV 315
+ D A ++ + +++VIDA +E + ++ P ++
Sbjct: 65 AEGISQDEQIAAQSVIDLEY--DCIINVIDACH------LERHLYLTSQLFELGKPVVVA 116
Query: 316 MNKIDMLEDFEPRID---RDEENKPNRVWLSAQTGAGIPQLFQALT 358
+N +D+ E ID + + + + A GIP L Q+L
Sbjct: 117 LNMMDIAEHRGISIDTEKLESLLGCSVIPIQAHKNIGIPALQQSLL 162
>2QU8-A nrPDB
Length = 228
Score = 72.1 bits (175), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 69/185 (37%), Gaps = 16/185 (8%)
Query: 199 TVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRH 258
T+ L G N GKS+ N ++ A V F T + + D + + + DT G +
Sbjct: 31 TIILSGAPNVGKSSFMNIVSRANVDVQSYSFTTKNLYVGHFD-HKLNKYQIIDTPGLLDR 89
Query: 259 LPHDLVAAFKATLQETRQAT-LLLHVIDAAD---VRVQENIEAVNTVLEEIDAHEIPTLL 314
+ T+ ++L +ID ++ + ++E I ++ I ++
Sbjct: 90 AFENRNTIEMTTITALAHINGVILFIIDISEQCGLTIKEQINLFYSIKSVFSNKSI--VI 147
Query: 315 VMNKIDMLEDFEPRIDRDEENK------PNRVWLSA---QTGAGIPQLFQALTERLSGEV 365
NKID ID K N + S+ TG G+ Q E L +
Sbjct: 148 GFNKIDKCNMDSLSIDNKLLIKQILDNVKNPIKFSSFSTLTGVGVEQAKITACELLKNDQ 207
Query: 366 AQHTL 370
A+ L
Sbjct: 208 AESIL 212
>3W5J-A nrPDB
Length = 204
Score = 71.7 bits (174), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/212 (20%), Positives = 83/212 (39%), Gaps = 18/212 (8%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
++L+G N GKSTLFNR+T + T++ +I + + D G
Sbjct: 6 IALLGMPNTGKSTLFNRMTGGAARVGNWPGITVELLSGKILL-GADMVEIIDLPGIYDLH 64
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKI 319
L L +++A IE ++L ++ + ++++N
Sbjct: 65 GFSDDEQVVRHFLHDNVPDLALVILNATQ------IERQMSLLLQLKQLNMNIVVLLNMS 118
Query: 320 DMLEDFEPRIDRDEENKPNRVW---LSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQE 376
D + + ID + ++ ++ LS + G G + QA+T L P
Sbjct: 119 DEAKQYGITIDSRKMSELLQIPVFQLSGKYGTGYQEALQAVTRAL-------RYPTPGMA 171
Query: 377 GRLRSRFYQLQAIEKEWME-EDGSVSLQVRMP 407
+R++ Q + IE E + +V + R+P
Sbjct: 172 ENVRTQLEQDEHIEAEMVRILKSAVQIPARLP 203
>4A9A-A nrPDB
Length = 376
Score = 71.3 bits (173), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 63/167 (37%), Gaps = 15/167 (8%)
Query: 194 KADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTV 253
+ V +V VG+ + GKSTL +++T AA+ F TL I + + D
Sbjct: 69 RTGVASVGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTLVTVPGVIRYKG-AKIQMLDLP 127
Query: 254 GFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTL 313
G I D K + R LL ++D V + + + +E++ I
Sbjct: 128 GIIDGAK-DGRGRGKQVIAVARTCNLLFIILD-----VNKPLHHKQIIEKELEGVGIR-- 179
Query: 314 LVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTER 360
+NK + I + E+ + T G ++ ++E
Sbjct: 180 --LNKT----PPDILIKKKEKGGISITNTVPLTHLGNDEIRAVMSEY 220
Score = 33.5 bits (75), Expect = 0.19, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 294 NIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQL 353
++ + VLE +P + V+NKID L E + PN V +S+ + +L
Sbjct: 234 TVDDLIDVLEASSRRYMPAIYVLNKIDSLSIEELELLYR---IPNAVPISSGQDWNLDEL 290
Query: 354 FQALTERL 361
Q + +RL
Sbjct: 291 LQVMWDRL 298
>4V7F-o nrPDB
Length = 647
Score = 70.9 bits (172), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 81/212 (38%), Gaps = 13/212 (6%)
Query: 171 IVQIQSRLERVEKQREQ-GRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLF 229
+ +++ L +E+ R+ GR I + T+ + GY N GKS+ IT++ V F
Sbjct: 140 VKKLRDPLAYLEQVRQHIGRLPSIDPNTRTLLICGYPNVGKSSFLRCITKSDVDVQPYAF 199
Query: 230 ATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQET-RQATLLLHVIDAAD 288
T + D DT G + ++ ++ + +L+ +D ++
Sbjct: 200 TTKSLYVGHFDYK-YLRFQAIDTPGILDRPTEEMNNIEMQSIYAIAHLRSCVLYFMDLSE 258
Query: 289 --VRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDF---EPRIDRDEENKP----NR 339
E + ++ + A ++V+NK D++ E R E K
Sbjct: 259 QCGFTIEAQVKLFHSIKPLFA-NKSVMVVINKTDIIRPEDLDEERAQLLESVKEVPGVEI 317
Query: 340 VWLSAQTGAGIPQLFQALTERLSGEVAQHTLR 371
+ S Q + ++ E+L ++ L+
Sbjct: 318 MTSSCQLEENVMEVRNKACEKLLASRIENKLK 349
>2CXX-A nrPDB
Length = 190
Score = 70.5 bits (171), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 72/185 (38%), Gaps = 27/185 (14%)
Query: 197 VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTV--G 254
+ T+ G +N GKSTL R+T +V + T + I+ + + D G
Sbjct: 1 MATIIFAGRSNVGKSTLIYRLTGKKVRRGKRPGVTR--KIIEIEWKNHK---IIDMPGFG 55
Query: 255 FIRHLPHDLVAAFKATLQE-----TRQATLLLHVIDAADVR-------VQENIEAVNTVL 302
F+ LP ++ K + + + + V+D + I
Sbjct: 56 FMMGLPKEVQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFY 115
Query: 303 EEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNR--------VWLSAQTGAGIPQLF 354
+ + +IPT++ +NK+D +++ + I+ E + +SA+ G I +L
Sbjct: 116 QFLRELDIPTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIDKVFIPISAKFGDNIERLK 175
Query: 355 QALTE 359
+ E
Sbjct: 176 NRIFE 180
>1NI3-A nrPDB
Length = 392
Score = 69.4 bits (168), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 25/137 (18%)
Query: 201 SLVGYTNAGKSTLFNRITEARV-YAADQLFATLDPTLRRIDVADVG-------------- 245
+VG N GKST F IT++ + A+ +AT+DP ++ V D
Sbjct: 24 GIVGMPNVGKSTFFRAITKSVLGNPANYPYATIDPEEAKVAVPDERFDWLCEAYKPKSRV 83
Query: 246 --ETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVR-------VQENIE 296
+ D G + V A L R + V+ A D + I
Sbjct: 84 PAFLTVFDIAGLTKGASTG-VGLGNAFLSHVRAVDAIYQVVRAFDDAEIIHVEGDVDPIR 142
Query: 297 AVNTVLEEIDAHEIPTL 313
++ +++E+ + +
Sbjct: 143 DLSIIVDELLIKDAEFV 159
>1WXQ-A nrPDB
Length = 397
Score = 67.4 bits (163), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/181 (18%), Positives = 61/181 (33%), Gaps = 32/181 (17%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRI-------------------- 239
+ +VG N GKST F+ T V A+ F T++ +
Sbjct: 3 IGVVGKPNVGKSTFFSAATLVDVEIANYPFTTIEANVGVTYAITDHPCKELGCSPNPQNY 62
Query: 240 DVADVGETV---LADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAA-----DVRV 291
+ + + + D G + L + R A+ L+HV+DA + +
Sbjct: 63 EYRNGLALIPVKMVDVAGLVPGAHEGRGLG-NKFLDDLRMASALIHVVDATGKTDPEGQP 121
Query: 292 QENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIP 351
+ + V + E EI + + F RI ++ K +G G+
Sbjct: 122 TDYHDPVEDI--EFLEREIDYWIYGILSKGWDKFAKRIK-LQKIKLESAIAEHLSGIGVN 178
Query: 352 Q 352
+
Sbjct: 179 E 179
Score = 38.6 bits (88), Expect = 0.006, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 70/200 (35%), Gaps = 11/200 (5%)
Query: 209 GKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFK 268
GK+ + T+ D F + + G A + + +A
Sbjct: 113 GKTDPEGQPTDYHDPVEDIEFLEREIDYWIYGILSKGWDKFAKRIKLQKIKLESAIAEHL 172
Query: 269 ATLQETRQATL--LLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFE 326
+ + + + +H ++ + + + + + EI P ++ NK D D +
Sbjct: 173 SGIG-VNENDVWEAMHKLNLPEDPTKWSQDDLLAFASEIRRVNKPMVIAANKADAASDEQ 231
Query: 327 PRIDRDEENKPNRVWL--SAQTGAGIPQLFQA-LTERLSGEVAQHTLRLPPQEGRLRSRF 383
+ EE K + + SA + + +A E + G LR ++ +
Sbjct: 232 IKRLVREEEKRGYIVIPTSAAAELTLRKAAKAGFIEYIPGASEFKVLRDMSEKQK----- 286
Query: 384 YQLQAIEKEWMEEDGSVSLQ 403
L I+++ ++ GS +Q
Sbjct: 287 RALMVIKEKVLDRFGSTGVQ 306
>6GB2-BC nrPDB
Length = 657
Score = 65.9 bits (159), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/223 (17%), Positives = 84/223 (37%), Gaps = 26/223 (11%)
Query: 164 RRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVY 223
+L +++ Q + R + +R Q + + P V+++G+ + GK+TL ++ + +V
Sbjct: 77 MKLKWSKLKQDKVRKNKDAVRRPQADPALLTPRSPVVTIMGHVDHGKTTLLDKFRKTQVA 136
Query: 224 AADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHV 283
A + T + + + DT G A + +++ V
Sbjct: 137 AVETGGITQHIGAFLVSLPSGEKITFLDTPGHAAFSAMRARGA--------QVTDIVVLV 188
Query: 284 IDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRID----------RDE 333
+ A D +++ +E+ ++ ++P +L +NK D E ++ D
Sbjct: 189 VAADDGVMKQTVES----IQHAKDAQVPIILAVNKCDKAEADPEKVKKELLAYDVVCEDY 244
Query: 334 ENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQE 376
V +SA TG + AL E L+ P
Sbjct: 245 GGDVQAVPVSALTGDNL----MALAEATVALAEMLELKADPNG 283
>3IZY-P nrPDB
Length = 537
Score = 65.9 bits (159), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 73/169 (43%), Gaps = 22/169 (13%)
Query: 198 PTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIR 257
P V+++G+ + GK+TL +++ + +V A + T + + + DT G
Sbjct: 5 PVVTIMGHVDHGKTTLLDKLRKTQVAAMEAGGITQHIGAFLVSLPSGEKITFLDTPG--- 61
Query: 258 HLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMN 317
H +A +A + T+ +++ V+ A D +++ +E+ ++ +P +L +N
Sbjct: 62 ---HAAFSAMRA--RGTQVTDIVILVVAADDGVMKQTVES----IQHAKDAHVPIVLAIN 112
Query: 318 KIDMLEDFEPRID----------RDEENKPNRVWLSAQTGAGIPQLFQA 356
K D E ++ D V +SA TG + L +A
Sbjct: 113 KCDKAEADPEKVKKELLAYDVVCEDYGGDVQAVHVSALTGENMMALAEA 161
>2LKD-A nrPDB
Length = 178
Score = 60.9 bits (146), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 68/174 (39%), Gaps = 29/174 (16%)
Query: 198 PTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIR 257
P V+++G+ + GK+TL + I ++V + T ++ V D + DT G
Sbjct: 9 PVVTIMGHVDHGKTTLLDAIRHSKVTEQEAGGITQHIGAYQVTVND-KKITFLDTPGHEA 67
Query: 258 HLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMN 317
A + +++ V+ A D + + +EA+N A +P ++ +N
Sbjct: 68 FTTMRARGA--------QVTDIVILVVAADDGVMPQTVEAIN----HAKAANVPIIVAIN 115
Query: 318 KIDMLEDFEPRIDRDEENKPN-------------RVWLSAQTGAGIPQLFQALT 358
K+D E DR + LSA+T G+ L + +
Sbjct: 116 KMD---KPEANPDRVMQELMEYNLVPEEWGGDTIFCKLSAKTKEGLDHLLEMIL 166
>3PR1-A nrPDB
Length = 195
Score = 60.5 bits (145), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 65/180 (36%), Gaps = 27/180 (15%)
Query: 198 PTVSLVGYTNAGKSTLFNRITEARVY-AADQLFATLDPTLRRIDVADVGETVLADTVGF- 255
V+ VG +N GKS+L N + ++ + T ++ + D G+
Sbjct: 24 GEVAFVGRSNVGKSSLLNALFNRKIAFVSKTPGKTRSINFYLVN----SKYYFVDLPGYG 79
Query: 256 -------IRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAH 308
R L LV + + ++ ++D ++ V + +
Sbjct: 80 YAKVSKKERMLWKRLVEDYFKNRWSLQ---MVFLLVDGRIPPQDSDLMMVEW----MKSL 132
Query: 309 EIPTLLVMNKIDMLEDFEPRIDRDEENKP-------NRVWLSAQTGAGIPQLFQALTERL 361
IP +V+ K+D ++ E +E K + S+ TG GI +L ++ L
Sbjct: 133 NIPFTIVLTKMDKVKMSERAKKLEEHRKVFSKYGEYTIIPTSSVTGEGISELLDLISTLL 192
>1SUL-A nrPDB
Length = 195
Score = 60.5 bits (145), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/181 (12%), Positives = 63/181 (34%), Gaps = 22/181 (12%)
Query: 197 VPTVSLVGYTNAGKSTLFNRITEAR--VYAADQLFATLDPTLRRIDVADVGETVLADTVG 254
+P ++L G +N GKS+ N + + + + T I+ E D G
Sbjct: 23 LPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIIN----DELHFVDVPG 78
Query: 255 -----FIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHE 309
+ + + + ++ ++D ++++ + +
Sbjct: 79 YGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEF----LKYYG 134
Query: 310 IPTLLVMNKIDML-----EDFEPRIDRDEENKP--NRVWLSAQTGAGIPQLFQALTERLS 362
IP +++ K D + + + + P + S++T G + + A+ + ++
Sbjct: 135 IPVIVIATKADKIPKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEAWGAIKKMIN 194
Query: 363 G 363
Sbjct: 195 R 195
>5J8B-z nrPDB
Length = 679
Score = 55.9 bits (133), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/245 (19%), Positives = 89/245 (36%), Gaps = 37/245 (15%)
Query: 153 RGPGETQLETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKAD-VPTVSLVGYTNAGKS 211
RG E++ + L RI RL + + E+ ++ + S++ + + GKS
Sbjct: 33 RGLAVLATESNLKALEARIRAQAKRLAERKAEAERLKEILENLSRIRNFSIIAHVDHGKS 92
Query: 212 TLFNRITEARVYAAD---------------QLFATLDPTLRRIDVA----DVGETVLADT 252
TL +RI E +D + T+ + R+ + L DT
Sbjct: 93 TLADRILELTHAVSDREMREQFLDSLELERERGITIKASAVRVTYRAKDGEEYVFHLIDT 152
Query: 253 VGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPT 312
G + D L +L V+DA+ E + LE
Sbjct: 153 PGHV-----DFTYEVSRALAAVE---GVLLVVDASQGVEAETLAKFYMALEH----GHVI 200
Query: 313 LLVMNKIDM--LEDFEPRIDRDEENKP---NRVWLSAQTGAGIPQLFQALTERLSGEVAQ 367
+ V+NKID+ E ++ +E ++ S +TG G+ ++ +A+ +R+
Sbjct: 201 IPVINKIDLPNARPLEVALEVEEVLGLPADEAIFASGKTGEGVEEILEAIVQRIPPPKGD 260
Query: 368 HTLRL 372
L
Sbjct: 261 PEAPL 265
>4ZU9-A nrPDB
Length = 582
Score = 54.7 bits (130), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 17/172 (9%)
Query: 201 SLVGYTNAGKSTLFNRITE---ARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFI 256
+ G+ + GK+TL +T R+ + ++D ID D+ + D G
Sbjct: 7 ATAGHVDHGKTTLIKTLTGIDTDRLPEEKKRGLSIDIGFAYIDFPDINTRLEIIDVPGHE 66
Query: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVM 316
R + + + A+ L+ V+D + + + IE + H I L M
Sbjct: 67 RFIKNAIAG--------ICSASGLILVVDPNEGIMPQTIEHLRVAKSFGIKHGIAVLTKM 118
Query: 317 NKID-----MLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSG 363
+K+D + E+ EE V +SA TG GI L ++ + L
Sbjct: 119 DKVDEELAHIAEEELIAFLEKEEMNMEIVKVSAVTGQGIEDLKNSIKKLLES 170
>3J4J-A nrPDB
Length = 569
Score = 54.7 bits (130), Expect = 7e-08, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 92/240 (38%), Gaps = 24/240 (10%)
Query: 171 IVQIQSRLERV-EKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLF 229
+ ++ + EK E+ R+ + P V ++G+ + GK+TL + + ++R+ +
Sbjct: 46 VRELVKEQRGLQEKLAEEERRKSLPRRPPVVVIMGHVDHGKTTLLDYLRKSRIAEKEAGG 105
Query: 230 ATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADV 289
T + G V DT G H+ + + + A + + VI A D
Sbjct: 106 ITQHVGAFEVKTPQ-GTVVFIDTPG------HEAFTTIRQ--RGAKVADIAVIVIAADDG 156
Query: 290 RVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDR----------DEENKPNR 339
+ + EA+ + +NKID+ + ++ R +
Sbjct: 157 IMPQTEEAIAHAKAAGAK----LIFAINKIDLPQADPEKVKRQLMERGFVPEEYGGDAIV 212
Query: 340 VWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEEDGS 399
+ +SA+TG G+ L + + E + P+ L S+ + I + ++G+
Sbjct: 213 IPISAKTGQGVQDLLEMILLLAELEDYRADPNAEPRGVILESKLDKQAGIIANMLVQEGT 272
>4KJZ-A nrPDB
Length = 473
Score = 54.3 bits (129), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 92/240 (38%), Gaps = 24/240 (10%)
Query: 171 IVQIQSRLERV-EKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLF 229
+ ++ + EK E+ R+ + P V ++G+ + GK+TL + + ++R+ +
Sbjct: 45 VRELVKEQRGLQEKLAEEERRKSLPRRPPVVVIMGHVDHGKTTLLDYLRKSRIAEKEAGG 104
Query: 230 ATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADV 289
T + G V DT G H+ + + + A + + VI A D
Sbjct: 105 ITQHVGAFEVKTPQ-GTVVFIDTPG------HEAFTTIRQ--RGAKVADIAVIVIAADDG 155
Query: 290 RVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDR----------DEENKPNR 339
+ + EA+ + +NKID+ + ++ R +
Sbjct: 156 IMPQTEEAIAHAKAAGAK----LIFAINKIDLPQADPEKVKRQLMERGFVPEEYGGDAIV 211
Query: 340 VWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEEDGS 399
+ +SA+TG G+ L + + E + P+ L S+ + I + ++G+
Sbjct: 212 IPISAKTGQGVQDLLEMILLLAELEDYRADPNAEPRGVILESKLDKQAGIIANMLVQEGT 271
>4B44-A nrPDB
Length = 363
Score = 54.0 bits (128), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/240 (17%), Positives = 92/240 (38%), Gaps = 24/240 (10%)
Query: 171 IVQIQSRLERV-EKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLF 229
+ ++ + EK E+ R+ + P V ++G+ + GK+TL + + ++R+ +
Sbjct: 46 VRELVKEQRGLQEKLAEEERRKSLPRRPPVVVIMGHVDHGKTTLLDYLRKSRIAEKEAGG 105
Query: 230 ATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADV 289
T + G V DT G H+ + + + A + + VI A D
Sbjct: 106 ITQHVGAFEVKTPQ-GTVVFIDTPG------HEAFTTIRQ--RGAKVADIAVIVIAADDG 156
Query: 290 RVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDR----------DEENKPNR 339
+ + EA+ + +NKID+ + ++ R +
Sbjct: 157 IMPQTEEAIAHAKAAGAK----LIFAINKIDLPQADPEKVKRQLMERGFVPEEYGGDAIV 212
Query: 340 VWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEEDGS 399
+ +SA+TG G+ L + + E + P+ L S+ + I + ++G+
Sbjct: 213 IPISAKTGQGVQDLLEMILLLAELEDYRADPNAEPRGVILESKLDKQAGIIANMLVQEGT 272
>4V0N-A nrPDB
Length = 169
Score = 53.2 bits (126), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 20/172 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVL-ADTVGFIRH 258
V +VG N+GK+T+ R+ + R A ++ T+ T+ ++ + TV G R
Sbjct: 9 VLVVGLDNSGKTTIIERL-KPRPRQAAEVAPTVGFTVDEVEKGPLTFTVFDMSGAGRYRT 67
Query: 259 LPHDLVAAFKATLQETRQATLLLHVID-AADVRVQENIEAVNTVLEEIDAHEIPTLLVMN 317
L R+A ++ V+D A +R+ + + +L+ + ++P L N
Sbjct: 68 LWEQY----------YREADAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPILYFAN 117
Query: 318 KIDM------LEDFEPRIDRDEENKP-NRVWLSAQTGAGIPQLFQALTERLS 362
K D+ +E + D +++P V + TG G+ + L ERLS
Sbjct: 118 KKDLPVAMPPVEIAQALGLDDIKDRPWQIVPSNGLTGEGVDKGIDWLAERLS 169
>1ZO1-I nrPDB
Length = 501
Score = 51.3 bits (121), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 25/181 (13%)
Query: 197 VPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256
P V+++G+ + GK++L I +V + + T ++ + G DT G
Sbjct: 4 APVVTIMGHVDHGKTSLLEYIRSTKVASGEAGGITQHIGAYHVETEN-GMITFLDTPGHA 62
Query: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVM 316
A + +++ V+ A D + + IEA ++ A ++P ++ +
Sbjct: 63 AFTSMRARGA--------QATDIVVLVVAADDGVMPQTIEA----IQHAKAAQVPVVVAV 110
Query: 317 NKIDMLEDFEPRIDRD---EENKPN-------RVWLSAQTGAGIPQLFQALTERLSGEVA 366
NKID E R+ + P V +SA+ G GI +L A+ L EV
Sbjct: 111 NKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAIL--LQAEVL 168
Query: 367 Q 367
+
Sbjct: 169 E 169
>4AC9-A nrPDB
Length = 482
Score = 51.3 bits (121), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 64/179 (35%), Gaps = 30/179 (16%)
Query: 200 VSLVGYTNAGKSTLFNRITE-------ARVYAADQLFATLDPTLRRIDVADVGETVLADT 252
+ + G+ + GK+TL +TE ++ + + T+D + + L D
Sbjct: 22 LGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKLENYR-ITLVDA 80
Query: 253 VGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPT 312
G +A + L L V+DA + + E + +D IP
Sbjct: 81 PG--------HADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLI----LDHFNIPI 128
Query: 313 LLVMNKIDMLEDFEPRIDRD----------EENKPNRVWLSAQTGAGIPQLFQALTERL 361
++V+ K D E + + + +SA+TG G+ +L + L
Sbjct: 129 IVVITKSDNAGTEEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDELKNLIITTL 187
>4DHE-A nrPDB
Length = 223
Score = 50.5 bits (119), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 57/192 (29%), Gaps = 25/192 (13%)
Query: 198 PTVSLVGYTNAGKSTLFNRITEAR--VYAADQLFATLDPTLRRIDVADVGETVLADTVGF 255
P ++ G +NAGKST N + + +A+ T + A L D G+
Sbjct: 30 PEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSVGPAAEPVAHLVDLPGY 89
Query: 256 IRHLPHDLVAA-----FKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEI 310
A + LQ Q ++ ++DA E ++E
Sbjct: 90 GYAEVPGAAKAHWEQLLSSYLQTRPQLCGMILMMDARRPLT----ELDRRMIEWFAPTGK 145
Query: 311 PTLLVMNKIDMLEDFE---------PRIDRD----EENKPNRVWLSAQTGAGIPQLFQAL 357
P ++ K D L E +D K SA G+ AL
Sbjct: 146 PIHSLLTKCDKLTRQESINALRATQKSLDAYRDAGYAGKLTVQLFSALKRTGLDD-AHAL 204
Query: 358 TERLSGEVAQHT 369
E A
Sbjct: 205 IESWLRPAAADE 216
>1PUJ-A nrPDB
Length = 282
Score = 50.5 bits (119), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 15/148 (10%)
Query: 169 NRIVQIQSRL--ERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEAR-VYAA 225
N+IV + E+ ++ R +G + R ++G N GKSTL NR+ +
Sbjct: 94 NQIVPASKEILQEKFDRMRAKGVKPR----AIRALIIGIPNVGKSTLINRLAKKNIAKTG 149
Query: 226 DQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHD-LVAAFKATLQETRQATLLLHVI 284
D+ T ++ E L DT G + D LV A + ++++
Sbjct: 150 DRPGITTSQQWVKV----GKELELLDTPGILWPKFEDELVGLRLAVTGAIK--DSIINLQ 203
Query: 285 DAADVRVQENIEAV-NTVLEEIDAHEIP 311
D A ++ E + E EIP
Sbjct: 204 DVAVFGLRFLEEHYPERLKERYGLDEIP 231
>2EW1-A nrPDB
Length = 201
Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/176 (23%), Positives = 68/176 (38%), Gaps = 13/176 (7%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
+ L+G GK+ L R T+ +D ++ +++ + + DT G R
Sbjct: 29 IVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQER- 87
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
T R A L+ D + +E+ ++++ T+LV NK
Sbjct: 88 -------FRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNK 140
Query: 319 IDMLEDFEPRIDRDEE----NKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTL 370
ID+ E E R EE + SA+ + +LF L RL E Q+TL
Sbjct: 141 IDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTL 196
>1ZC4-A nrPDB
Length = 175
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 13/174 (7%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
V +VG GKS L + + D D +++ + + + DT G
Sbjct: 9 VIMVGSGGVGKSALTLQFMYDE-FVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGL--- 64
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
D A + + + + + +L + +P LLV NK
Sbjct: 65 --EDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFR--EQILRVKEDENVPFLLVGNK 120
Query: 319 IDMLED----FEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQH 368
D+ + E +R E+ N V SA+T A + ++F L + +
Sbjct: 121 SDLEDKRQVSVEEAKNRAEQWNVNYVETSAKTRANVDKVFFDLMREIRARKMED 174
>3JCN-b nrPDB
Length = 890
Score = 49.3 bits (116), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/217 (21%), Positives = 91/217 (41%), Gaps = 30/217 (13%)
Query: 161 ETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEA 220
E +++ R +++ E V R+ G + +A P V+++G+ + GK++L + I
Sbjct: 360 EMGHKVILRRENELE---EAVMSDRDTGAAAEPRA--PVVTIMGHVDHGKTSLLDYIRST 414
Query: 221 RVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLL 280
+V + + T ++ + G DT G A + ++
Sbjct: 415 KVASGEAGGITQHIGAYHVETEN-GMITFLDTPGHAAFTSMRARGA--------QATDIV 465
Query: 281 LHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRD---EENKP 337
+ V+ A D + + IEA ++ A ++P ++ +NKID E R+ + P
Sbjct: 466 VLVVAADDGVMPQTIEA----IQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQYGILP 521
Query: 338 N-------RVWLSAQTGAGIPQLFQALTERLSGEVAQ 367
V +SA+ G GI +L A+ L EV +
Sbjct: 522 EEWGGESQFVHVSAKAGTGIDELLDAIL--LQAEVLE 556
>5UCV-A nrPDB
Length = 217
Score = 49.3 bits (116), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 65/175 (37%), Gaps = 25/175 (14%)
Query: 200 VSLVGYTNAGKSTLFNRITE--ARVYAADQLFATLDPTLRRIDVADVGETVLADTVGF-I 256
++ VG +NAGKS+ N +T Y + T + + + D G+
Sbjct: 34 IAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFFELQNGN----FMVDLPGYGY 89
Query: 257 RHLPHDL----VAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPT 312
+P + V L+ +Q L+ ++DA + +I ++ P
Sbjct: 90 AQVPEAVRAHWVNLLGDYLRHRKQLIGLVLIMDARHPLKELDIRMLDFFH----TTGRPV 145
Query: 313 LLVMNKIDMLEDFEP-----RIDRDEENKPNRVWL-----SAQTGAGIPQLFQAL 357
++++K D L E ++ + + +R + S+ GI + + +
Sbjct: 146 HILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISVQLFSSLKKQGIDEANRTV 200
>4BAS-A nrPDB
Length = 199
Score = 49.0 bits (115), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 66/183 (36%), Gaps = 30/183 (16%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
V + G N+GK+T+ N++ A+ + + AT+ + + V TV D G
Sbjct: 20 VVMCGLDNSGKTTIINQVKPAQSSSK-HITATVGYNVETFEKGRVAFTVF-DMGG----- 72
Query: 260 PHDLVAAFKATLQETRQ--ATLLLHVIDAADVRV-------QENIEAVNTVLEEI-DAHE 309
A L ET ++ V+D++D + + + E+
Sbjct: 73 -----AKKFRGLWETYYDNIDAVIFVVDSSDHLRLCVVKSEIQAMLKHEDIRRELPGGGR 127
Query: 310 IPTLLVMNKIDM-----LEDFEPRIDRDEENKPNRVWLSA---QTGAGIPQLFQALTERL 361
+P L NK+D + +D + + A G G+ + F L E
Sbjct: 128 VPFLFFANKMDAAGAKTAAELVEILDLTTLMGDHPFVIFASNGLKGTGVHEGFSWLQETA 187
Query: 362 SGE 364
S +
Sbjct: 188 SRQ 190
>2G77-B nrPDB
Length = 198
Score = 49.0 bits (115), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 71/183 (38%), Gaps = 12/183 (6%)
Query: 191 SRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVL 249
++ + + ++G +N GK+ L R R + +D R +D+ + L
Sbjct: 23 PPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQL 82
Query: 250 ADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEA-VNTVLEEIDAH 308
DT G +V + R ++ V D ++ ++ A + + + A+
Sbjct: 83 WDTAG-QERFRKSMVQHYY------RNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLAN 135
Query: 309 EIPTLLVMNKIDMLEDFEPRIDRDEE---NKPNRVWLSAQTGAGIPQLFQALTERLSGEV 365
+IP +LV NK D+ + D ++ ++ ++ +A+ L+ ++
Sbjct: 136 DIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKL 195
Query: 366 AQH 368
H
Sbjct: 196 KSH 198
>1Z06-A nrPDB
Length = 189
Score = 49.0 bits (115), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 71/180 (39%), Gaps = 12/180 (6%)
Query: 194 KADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADT 252
++ + + ++G +N GK+ L R R + +D R +D+ + L DT
Sbjct: 17 RSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDT 76
Query: 253 VGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEA-VNTVLEEIDAHEIP 311
G +V + R ++ V D ++ ++ A + + + A++IP
Sbjct: 77 AG-QERFRKSMVQHYY------RNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIP 129
Query: 312 TLLVMNKIDMLEDFEPRIDRDEE---NKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQH 368
+LV NK D+ + D ++ ++ ++ +A+ L+ ++ H
Sbjct: 130 RILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKSH 189
>1M2O-B nrPDB
Length = 190
Score = 48.6 bits (114), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 13/127 (10%)
Query: 203 VGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHD 262
+G NAGK+TL + + R+ T PT + + ++ T D G I+
Sbjct: 29 LGLDNAGKTTLLHMLKNDRLATLQP---TWHPTSEELAIGNIKFTTF-DLGGHIQ----- 79
Query: 263 LVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDA-HEIPTLLVMNKIDM 321
A + + ++ ++DAAD + L I ++P +++ NKID
Sbjct: 80 ---ARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDA 136
Query: 322 LEDFEPR 328
Sbjct: 137 PNAVSEA 143
>6G12-A nrPDB
Length = 301
Score = 48.2 bits (113), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 10/106 (9%)
Query: 179 ERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEAR-VYAADQLFATLDPTLR 237
E+ E+++ +G + R +VG N GKSTL N++ + ++ T
Sbjct: 113 EKFEREKAKGLKPR----AIRAMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWI 168
Query: 238 RIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHV 283
++ L DT G + D K +L + ++H+
Sbjct: 169 KV----GNALQLLDTPGILWPKFEDEEVGKKLSLTGAIK-DSIVHL 209
Score = 35.1 bits (79), Expect = 0.059, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 46/124 (37%), Gaps = 9/124 (7%)
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKI 319
P + A + ++ ++ ++ ++DA N + + P ++++NK
Sbjct: 14 PGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQ------KPRVVILNKK 67
Query: 320 DM--LEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEG 377
DM L + + V + A+ G + + +A + + E + +
Sbjct: 68 DMSNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKK-VEAAAIKATAEKFEREKAKGLKPR 126
Query: 378 RLRS 381
+R+
Sbjct: 127 AIRA 130
>6GNI-B nrPDB
Length = 167
Score = 48.2 bits (113), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 13/127 (10%)
Query: 203 VGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHD 262
+G NAGK+TL + + R+ T PT + + ++ T D G I+
Sbjct: 7 LGLDNAGKTTLLHMLKNDRLATLQP---TWHPTSEELAIGNIKFTTF-DLGGHIQ----- 57
Query: 263 LVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDA-HEIPTLLVMNKIDM 321
A + + ++ ++DAAD + L I ++P +++ NKID
Sbjct: 58 ---ARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDA 114
Query: 322 LEDFEPR 328
Sbjct: 115 PNAVSEA 121
>2D74-A nrPDB
Length = 419
Score = 48.2 bits (113), Expect = 8e-06, Method: Composition-based stats.
Identities = 39/222 (17%), Positives = 71/222 (31%), Gaps = 34/222 (15%)
Query: 188 GRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQ---LFATLDPTLRRIDVAD- 243
G + + + + +VG+ + GK+TL +T + T+ ++
Sbjct: 2 GEKRKTRQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRC 61
Query: 244 ---------------VGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAAD 288
ET V FI H+ + L + VI A +
Sbjct: 62 SNCGRYSTSPICPYCGHETEFIRRVSFIDSPGHEALMTTM--LAGASLMDGAILVIAANE 119
Query: 289 VRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLED---------FEPRIDRDEENKPNR 339
+ L+ I I ++ NKI++++ + I
Sbjct: 120 PCPRPQTREHLMALQIIGQKNI--IIAQNKIELVDKEKALENYRQIKEFIKGTVAENAPI 177
Query: 340 VWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRS 381
+ +SA GA I L +A+ E + PP+ LRS
Sbjct: 178 IPISALHGANIDVLVKAIEEFIPTPK--RDSNKPPKMLVLRS 217
>2YWH-A nrPDB
Length = 600
Score = 47.8 bits (112), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 74/185 (40%), Gaps = 36/185 (19%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAAD-----QLFATLDPTLRR---IDVADVGETV----- 248
++ + + GKSTL +R+ E ++ QL TLD R + + V
Sbjct: 11 IIAHVDHGKSTLADRLLEYTGAISEREKREQLLDTLDVERERGITVKMQAVRMFYKAKDG 70
Query: 249 ------LADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVL 302
L DT G + D L A L +IDA+ + + +
Sbjct: 71 NTYKLHLIDTPGHV-----DFSYEVSRALAACEGA---LLLIDASQGIEAQTVANFWKAV 122
Query: 303 EEIDAHEIPTLLVMNKIDM----LEDFEPRIDRDEENKPNRVWL-SAQTGAGIPQLFQAL 357
E+ ++ + V+NKID+ ++ + +I+ P L SA+ G GI ++ +A+
Sbjct: 123 EQ----DLVIIPVINKIDLPSADVDRVKKQIEEVLGLDPEEAILASAKEGIGIEEILEAI 178
Query: 358 TERLS 362
R+
Sbjct: 179 VNRIP 183
>5YT0-A nrPDB
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 13/153 (8%)
Query: 188 GRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGET 247
G + P V ++G+ + GK+TL ++I V A + T + + +
Sbjct: 7 GGDGERRLRQPIVVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKI 66
Query: 248 ---------VLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV 298
V G + + A + V+D + + EA+
Sbjct: 67 AEPLKKVIPVKLVIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEAL 126
Query: 299 NTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDR 331
+ +P L+ NKID + ++P D
Sbjct: 127 EL----LKERRVPFLIAANKIDRIPGWKPNPDA 155
>4NCL-A nrPDB
Length = 457
Score = 47.4 bits (111), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/245 (17%), Positives = 82/245 (33%), Gaps = 61/245 (24%)
Query: 198 PTVSLVGYTNAGKSTLFNRITEARVY------AADQLFATLDP----TLRRIDVADVGET 247
P ++G+ + GK+ L ++I + V Q+ AT P + V G+
Sbjct: 11 PICCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKF 70
Query: 248 VLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDA 307
G + + + + + + V+D + IE+ L +
Sbjct: 71 EF-KVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIES----LRLLRE 125
Query: 308 HEIPTLLVMNKIDML-----------------------EDFEPRIDRDEENKPN------ 338
+ P ++ +NKID L +F R+D+ +
Sbjct: 126 RKTPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNSE 185
Query: 339 -------------RVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQ 385
V SA TG GIP + + + + +A + L L++ +
Sbjct: 186 LFYENKNFARYVSLVPTSAHTGEGIPDMLKLIVQLCQERMASSLMYL----SELQATVLE 241
Query: 386 LQAIE 390
++AIE
Sbjct: 242 VKAIE 246
>4N3G-A nrPDB
Length = 603
Score = 47.4 bits (111), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/245 (17%), Positives = 82/245 (33%), Gaps = 61/245 (24%)
Query: 198 PTVSLVGYTNAGKSTLFNRITEARVY------AADQLFATLDP----TLRRIDVADVGET 247
P ++G+ + GK+ L ++I + V Q+ AT P + V G+
Sbjct: 11 PICCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKF 70
Query: 248 VLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDA 307
G + + + + + + V+D + IE+ L +
Sbjct: 71 EF-KVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIES----LRLLRE 125
Query: 308 HEIPTLLVMNKIDML-----------------------EDFEPRIDRDEENKPN------ 338
+ P ++ +NKID L +F R+D+ +
Sbjct: 126 RKTPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNSE 185
Query: 339 -------------RVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQ 385
V SA TG GIP + + + + +A + L L++ +
Sbjct: 186 LFYENKNFARYVSLVPTSAHTGEGIPDMLKLIVQLCQERMASSLMYL----SELQATVLE 241
Query: 386 LQAIE 390
++AIE
Sbjct: 242 VKAIE 246
>5DE3-A nrPDB
Length = 169
Score = 47.4 bits (111), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 26/176 (14%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLR---RIDVADVGETVLADTVGFI 256
+ ++G NAGK+T+ ++E + T+ PT + D + D G
Sbjct: 3 ILVLGLDNAGKTTILKALSEEDI-------TTITPTQGFNIKSLSRDGFNLKIWDIGGQK 55
Query: 257 RHLPHDLVAAFKATLQETRQATLLLHVID-AADVRVQENIEAVNTVLEEIDAHEIPTLLV 315
P+ Q L++VID A R+ E+ + +L+E +P L+
Sbjct: 56 SIRPY--------WRNYFDQTDALIYVIDSADSKRLSESEFELTELLQEEKMTGVPLLVF 107
Query: 316 MNKIDM---LEDFEPRIDRDEENKPNRVW----LSAQTGAGIPQLFQALTERLSGE 364
NK D+ L E D + +R W SA+ G G+ + + + +++ E
Sbjct: 108 ANKQDLVGALAADEIASTLDLTSIRDRPWQIQACSAKQGTGLKEGMEWMMKQVKLE 163
>5FG3-A nrPDB
Length = 623
Score = 47.4 bits (111), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 13/153 (8%)
Query: 188 GRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGET 247
G + P V ++G+ + GK+TL ++I V A + T + + +
Sbjct: 7 GGDGERRLRQPIVVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKI 66
Query: 248 ---------VLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV 298
V G + + A + V+D + + EA+
Sbjct: 67 AEPLKKVIPVKLVIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEAL 126
Query: 299 NTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDR 331
+ +P L+ NKID + ++P D
Sbjct: 127 EL----LKERRVPFLIAANKIDRIPGWKPNPDA 155
>4NCF-A nrPDB
Length = 457
Score = 47.4 bits (111), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 54/140 (38%), Gaps = 13/140 (9%)
Query: 192 RIKADVPTVSLVGYTNAGKSTLFNRITEARVY------AADQLFAT---LDPTLRRIDVA 242
+ P ++G+ + GK+ L ++I + V Q+ AT +D + V
Sbjct: 5 KKDLRSPICCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVM 64
Query: 243 DVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVL 302
E D G + + + + + + VID Q+ IE+ +
Sbjct: 65 AEYEKQTFDVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIES----I 120
Query: 303 EEIDAHEIPTLLVMNKIDML 322
+ + + P ++ +NKID L
Sbjct: 121 KLLRDRKAPFVVALNKIDRL 140
>4UJC-AB nrPDB
Length = 627
Score = 47.0 bits (110), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 66/174 (37%), Gaps = 21/174 (12%)
Query: 168 RNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVY---- 223
+ RI + R+E + + K P + ++G+ + GK+ + +++ V
Sbjct: 17 KRRIEK-----RRLEHSKNVNTE---KLRAPVICVLGHVDTGKTKILDKLRHTHVQDGEA 68
Query: 224 --AADQLFATLDP---TLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQAT 278
Q+ AT P + + + G + + + +
Sbjct: 69 GGITQQIGATNVPLEAINEQTKMIKNFDRENVRIPGMLIIDTPGHESFSNLRNRGSSLCD 128
Query: 279 LLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRD 332
+ + V+D + IE++N + + + P ++ +NKID L D++ D D
Sbjct: 129 IAILVVDIMHGLEPQTIESINL----LKSKKCPFIVALNKIDRLYDWKKSPDSD 178
>4M9Q-A nrPDB
Length = 227
Score = 47.0 bits (110), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/213 (22%), Positives = 79/213 (37%), Gaps = 33/213 (15%)
Query: 199 TVSLVGYTNAGKSTLFNRITEARVYAADQLF----ATLDPTLRRIDVADVGETVLADTVG 254
T++L+G NAGK+TL N I F TL+ +I+V D+
Sbjct: 6 TIALLGLDNAGKTTLLNSIQGEVDRDTTPTFGFNSTTLNEGKYKIEVFDL---------- 55
Query: 255 FIRHLPHDLVAAFKATLQETRQATLLLHVIDAADV-RVQENIEAVNTVLEEIDAHEIPTL 313
++ +K L E +++V+DAAD R +E+ + VLE + P
Sbjct: 56 ---GGGKNIRGVWKKYLAEVH---AIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPIC 109
Query: 314 LVMNKIDM--LEDFEPRID--------RDEENKPNRVWLSAQTGAGIPQLFQALTERLSG 363
+ NK D+ + P + A G + + + L G
Sbjct: 110 IFANKQDLPTAAPAAEVVKGLGLATCRNSHNVFPCTAKMPA--GQDVDHRLRDGLKWLVG 167
Query: 364 EVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEE 396
V + RL P+ Q +A +K+ EE
Sbjct: 168 TVDREFGRLDPRVQTEAEEVRQEEARKKKEREE 200
>2G6B-A nrPDB
Length = 180
Score = 47.0 bits (110), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 14/170 (8%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFAT-LDPTLRRIDVADVG-ETVLADTVGFIR 257
V LVG + GK+ L R + A + +D + +DV V + + DT G R
Sbjct: 13 VMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQER 72
Query: 258 HLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMN 317
T R A LL + D + +NI+A T + E H++ +L+ N
Sbjct: 73 --------FRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGN 124
Query: 318 KIDMLEDFEPRIDRDEENKPN----RVWLSAQTGAGIPQLFQALTERLSG 363
K+D + + + E+ + SA+TG + F A+ + L
Sbjct: 125 KVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKR 174
>4V8Y-CP nrPDB
Length = 339
Score = 47.0 bits (110), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 53/139 (38%), Gaps = 13/139 (9%)
Query: 193 IKADVPTVSLVGYTNAGKSTLFNRITEARVY------AADQLFAT---LDPTLRRIDVAD 243
P ++G+ + GK+ L ++I + V Q+ AT +D + V
Sbjct: 1 KDLRSPICCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMA 60
Query: 244 VGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLE 303
E D G + + + + + + VID Q+ IE+ ++
Sbjct: 61 EYEKQTFDVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIES----IK 116
Query: 304 EIDAHEIPTLLVMNKIDML 322
+ + P ++ +NKID L
Sbjct: 117 LLRDRKAPFVVALNKIDRL 135
>5IMR-C nrPDB
Length = 610
Score = 47.0 bits (110), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 71/196 (36%), Gaps = 36/196 (18%)
Query: 201 SLVGYTNAGKSTLFNRITEARVYAAD---------------QLFATLDPTLRRIDVA--- 242
S++ + + GKSTL +RI E +D + T+ + R+
Sbjct: 13 SIIAHVDHGKSTLADRILELTHAVSDREMREQFLDSLELERERGITIKASAVRVTYRAKD 72
Query: 243 -DVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTV 301
+ L DT G + D L +L V+DA+ E +
Sbjct: 73 GEEYVFHLIDTPGHV-----DFTYEVSRALAAVE---GVLLVVDASQGVEAETLAKFYMA 124
Query: 302 LEEIDAHEIPTLLVMNKIDM--LEDFEPRIDRDEENKP---NRVWLSAQTGAGIPQLFQA 356
LE + V+NKID+ E ++ +E ++ S +TG G+ ++ +A
Sbjct: 125 LEH----GHVIIPVINKIDLPNARPLEVALEVEEVLGLPADEAIFASGKTGEGVEEILEA 180
Query: 357 LTERLSGEVAQHTLRL 372
+ +R+ L
Sbjct: 181 IVQRIPPPKGDPEAPL 196
>6IYB-A nrPDB
Length = 199
Score = 47.0 bits (110), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 67/181 (37%), Gaps = 20/181 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLA-DTVGFIRH 258
V ++G + GK++L N+ + + D + + V D T+ DT G R
Sbjct: 16 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGLER- 74
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVN-TVLEEIDAHEI---PTLL 314
F++ + R A + V D + +++ L + + P ++
Sbjct: 75 --------FQSGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 126
Query: 315 VMNKIDMLEDFEPRIDR-----DEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHT 369
+ NKID LE+ + R +N SA+ + Q FQ + + +
Sbjct: 127 LGNKID-LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVE 185
Query: 370 L 370
L
Sbjct: 186 L 186
>4UJ4-A nrPDB
Length = 185
Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 63/177 (35%), Gaps = 13/177 (7%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
V L+G + GKS L +R T + ++ R I V + + DT G R+
Sbjct: 13 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLERY 72
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
T R A L V D A EN+E L + I +LV NK
Sbjct: 73 --------RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 124
Query: 319 IDMLEDFEPRIDR----DEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLR 371
D+ D E+N + + SA + FQ + + V+Q +
Sbjct: 125 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 181
>3WBI-A nrPDB
Length = 606
Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 53/139 (38%), Gaps = 13/139 (9%)
Query: 193 IKADVPTVSLVGYTNAGKSTLFNRITEARVY------AADQLFAT---LDPTLRRIDVAD 243
P ++G+ + GK+ L ++I + V Q+ AT +D + V
Sbjct: 5 KDLRSPICCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMA 64
Query: 244 VGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLE 303
E D G + + + + + + VID Q+ IE+ ++
Sbjct: 65 EYEKQTFDVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIES----IK 120
Query: 304 EIDAHEIPTLLVMNKIDML 322
+ + P ++ +NKID L
Sbjct: 121 LLRDRKAPFVVALNKIDRL 139
>3EC1-A nrPDB
Length = 369
Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 34/87 (39%), Gaps = 20/87 (22%)
Query: 178 LERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEA-----RVYAADQ-LFAT 231
+E + + RE G V +VG TN GKST NRI E V T
Sbjct: 153 MEAINRYREGG----------DVYVVGCTNVGKSTFINRIIEEATGKGNVITTSYFPGTT 202
Query: 232 LDPTLRRIDVADVGETVLADTVGFIRH 258
LD I++ L DT G I H
Sbjct: 203 LD----MIEIPLESGATLYDTPGIINH 225
Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 17/108 (15%)
Query: 267 FKATLQETRQAT-LLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLED- 324
F + L ++ L+++++D D A + P LLV NK D+L
Sbjct: 61 FLSMLHRIGESKALVVNIVDIFDFNG------SFIPGLPRFAADNPILLVGNKADLLPRS 114
Query: 325 -FEPRIDRDEENKPNRV--------WLSAQTGAGIPQLFQALTERLSG 363
P++ R + +SA G G+ ++ +A+ G
Sbjct: 115 VKYPKLLRWMRRMAEELGLCPVDVCLVSAAKGIGMAKVMEAINRYREG 162
>5DI3-B nrPDB
Length = 263
Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/213 (22%), Positives = 79/213 (37%), Gaps = 33/213 (15%)
Query: 199 TVSLVGYTNAGKSTLFNRITEARVYAADQLF----ATLDPTLRRIDVADVGETVLADTVG 254
T++L+G NAGK+TL N I F TL+ +I+V D+
Sbjct: 6 TIALLGLDNAGKTTLLNSIQGEVDRDTTPTFGFNSTTLNEGKYKIEVFDL---------- 55
Query: 255 FIRHLPHDLVAAFKATLQETRQATLLLHVIDAADV-RVQENIEAVNTVLEEIDAHEIPTL 313
++ +K L E +++V+DAAD R +E+ + VLE + P
Sbjct: 56 ---GGGKNIRGVWKKYLAEVH---AIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPIC 109
Query: 314 LVMNKIDM--LEDFEPRID--------RDEENKPNRVWLSAQTGAGIPQLFQALTERLSG 363
+ NK D+ + P + A G + + + L G
Sbjct: 110 IFANKQDLPTAAPAAEVVKGLGLATCRNSHNVFPCTAKMPA--GQDVDHRLRDGLKWLVG 167
Query: 364 EVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEE 396
V + RL P+ Q +A +K+ EE
Sbjct: 168 TVDREFGRLDPRVQTEAEEVRQEEARKKKEREE 200
>5FBL-B nrPDB
Length = 221
Score = 46.3 bits (108), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 63/177 (35%), Gaps = 13/177 (7%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
V L+G + GKS L +R T + ++ R I V + + DT G R+
Sbjct: 19 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 78
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
T R A L V D A EN+E L + I +LV NK
Sbjct: 79 --------RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 130
Query: 319 IDMLEDFEPRIDR----DEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLR 371
D+ D E+N + + SA + FQ + + V+Q +
Sbjct: 131 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 187
>4TN1-B nrPDB
Length = 345
Score = 46.3 bits (108), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/245 (17%), Positives = 81/245 (33%), Gaps = 61/245 (24%)
Query: 198 PTVSLVGYTNAGKSTLFNRITEARVY------AADQLFATLDP----TLRRIDVADVGET 247
P ++G+ GK+ L ++I + V Q+ AT P + V G+
Sbjct: 11 PICCILGHVRTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKF 70
Query: 248 VLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDA 307
G + + + + + + V+D + IE+ L +
Sbjct: 71 EF-KVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIES----LRLLRE 125
Query: 308 HEIPTLLVMNKIDML-----------------------EDFEPRIDRDEENKPN------ 338
+ P ++ +NKID L +F R+D+ +
Sbjct: 126 RKTPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNSE 185
Query: 339 -------------RVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQ 385
V SA TG GIP + + + + +A + L L++ +
Sbjct: 186 LFYENKNFARYVSLVPTSAHTGEGIPDMLKLIVQLCQERMASSLMYL----SELQATVLE 241
Query: 386 LQAIE 390
++AIE
Sbjct: 242 VKAIE 246
>3RWM-B nrPDB
Length = 185
Score = 46.3 bits (108), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 65/178 (36%), Gaps = 13/178 (7%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
+ L+G + GKS L +R T + ++ R I+V + + + DT G R+
Sbjct: 13 IVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGLERY 72
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
T R A L V D + EN T L E + L+ NK
Sbjct: 73 --------RAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNK 124
Query: 319 IDMLE----DFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRL 372
D+ + + EN+ SA + + F+ L + V++H + L
Sbjct: 125 SDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDL 182
>2KE5-A nrPDB
Length = 174
Score = 46.3 bits (108), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 61/167 (36%), Gaps = 12/167 (7%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
V +VG GKS L + + D D +++ + + + DT G +
Sbjct: 6 VIMVGSGGVGKSALTLQFMYDE-FVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 64
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
A + + + LL+ I + + + + +IP L+V NK
Sbjct: 65 A------AIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNK 118
Query: 319 IDMLE----DFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERL 361
D+ E E + EE V SA+T A + ++F L +
Sbjct: 119 SDLEERRQVPVEEARSKAEEWGVQYVETSAKTRANVDKVFFDLMREI 165
>4V8Z-CV nrPDB
Length = 586
Score = 46.3 bits (108), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 53/139 (38%), Gaps = 13/139 (9%)
Query: 193 IKADVPTVSLVGYTNAGKSTLFNRITEARVY------AADQLFAT---LDPTLRRIDVAD 243
P ++G+ + GK+ L ++I + V Q+ AT +D + V
Sbjct: 1 KDLRSPICCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMA 60
Query: 244 VGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLE 303
E D G + + + + + + VID Q+ IE+ ++
Sbjct: 61 EYEKQTFDVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIES----IK 116
Query: 304 EIDAHEIPTLLVMNKIDML 322
+ + P ++ +NKID L
Sbjct: 117 LLRDRKAPFVVALNKIDRL 135
>2F9L-A nrPDB
Length = 199
Score = 45.9 bits (107), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/177 (23%), Positives = 65/177 (36%), Gaps = 13/177 (7%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
V L+G + GKS L +R T + ++ R I V + + DT G R+
Sbjct: 8 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 67
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
+ T R A L V D A EN+E L + I +LV NK
Sbjct: 68 --------RRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 119
Query: 319 IDMLEDFEPRIDR----DEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLR 371
D+ D E+N + + SA + + F+ + + V+Q +
Sbjct: 120 SDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA 176
>3CPJ-B nrPDB
Length = 223
Score = 45.9 bits (107), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 66/178 (37%), Gaps = 13/178 (7%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
+ L+G + GKS L +R T+ + ++ R +++ + + DT G R+
Sbjct: 16 IVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTAGQERY 75
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
T R A L V D + EN + L E + L+ NK
Sbjct: 76 --------RAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNK 127
Query: 319 IDMLE----DFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRL 372
D+ E +EN+ SA + + F+ L + +V++H + L
Sbjct: 128 SDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDL 185
>1F6B-A nrPDB
Length = 198
Score = 45.9 bits (107), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 13/137 (9%)
Query: 198 PTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIR 257
+ +G NAGK+TL + + + R+ Q TL PT + +A + T D G I+
Sbjct: 26 GKLVFLGLDNAGKTTLLHMLKDDRL---GQHVPTLHPTSEELTIAGMTFTTF-DLGGHIQ 81
Query: 258 HLPHDLVAAFKATLQETRQATLLLHVID-AADVRVQENIEAVNTVLEEIDAHEIPTLLVM 316
A + ++ ++D A R+ E+ E +++++ + +P L++
Sbjct: 82 --------ARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILG 133
Query: 317 NKIDMLEDFEPRIDRDE 333
NKID E R+
Sbjct: 134 NKIDRPEAISEERLREM 150
>2ATV-A nrPDB
Length = 196
Score = 45.5 bits (106), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 57/171 (33%), Gaps = 17/171 (9%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADV-GETVLADTVGFIRH 258
+++ G GKS L R R + + + + D + DT G
Sbjct: 31 LAIFGRAGVGKSALVVRFLTKR-FIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQEDT 89
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDA-HEIPTLLVMN 317
+ + R + V D D E + + +L+EI + +LV N
Sbjct: 90 IQREG---------HMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGN 140
Query: 318 KIDMLEDFEPRIDRDEENKPNR----VWLSAQTGAG-IPQLFQALTERLSG 363
K D+ + + E+ SA TG G I ++F L +
Sbjct: 141 KADLDHSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREVRR 191
>3H2Y-A nrPDB
Length = 368
Score = 45.5 bits (106), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 61/168 (36%), Gaps = 18/168 (10%)
Query: 199 TVSLVGYTNAGKSTLFNRI-------TEARVYAADQLFATLDPTLRRIDVADVGETVLAD 251
V +VG TN GKST NR+ TE + + TLD ID+ E+ L D
Sbjct: 162 DVYVVGCTNVGKSTFINRMIKEFSDETENVITTSHFPGTTLD----LIDIPLDEESSLYD 217
Query: 252 TVGFIRH--LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHE 309
T G I H + H + + T++ ++ ++ + + V A
Sbjct: 218 TPGIINHHQMAHYVGKQSLKLITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSGGRRAFT 277
Query: 310 IPTLLVMNKIDMLEDFEPRIDRDEENKPN--RVWLSAQTGAGIPQLFQ 355
N++ + + D +N + + +P+L +
Sbjct: 278 CHF---SNRLTIHRTKLEKADELYKNHAGDLLSPPTPEELENMPELVK 322
>3BH6-A nrPDB
Length = 164
Score = 45.5 bits (106), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 20/159 (12%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
+ L+G NAGK+TL ++ + T ++ + V D G +
Sbjct: 7 ILLLGLDNAGKTTLLKQLASEDISHITP---TQGFNIKSVQSQGFKLNVW-DIGGLRKIR 62
Query: 260 PHDLVAAFKATLQETRQATLLLHVID-AADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
P+ +L++VID A R +E + + +LEE +P L+ NK
Sbjct: 63 PY--------WRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANK 114
Query: 319 IDMLEDF---EPRIDRDEENKPNRVW----LSAQTGAGI 350
D+L E + +RVW SA TG G+
Sbjct: 115 QDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGV 153
>5CM8-B nrPDB
Length = 203
Score = 45.1 bits (105), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 57/174 (32%), Gaps = 13/174 (7%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
V +VG GKS L + + D D +++ + + + DT G
Sbjct: 16 VIMVGSGGVGKSALTLQFMYDE-FVEDYEPTKADSYRKKVVLDGEEVQIDILDTAG---- 70
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
D A + + + D + + +L + IP LLV NK
Sbjct: 71 -QEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFR--EQILRVKNDESIPFLLVGNK 127
Query: 319 IDMLEDFEPRIDRDEENKPN----RVWLSAQTGAGIPQLFQALTERLSGEVAQH 368
D+ + + + + V SA+T + ++F L + +
Sbjct: 128 CDLNDKRKVPLSECQLRAQQWAVPYVETSAKTRENVDKVFFDLMREIRSRKTED 181
>1G7S-A nrPDB
Length = 594
Score = 44.7 bits (104), Expect = 7e-05, Method: Composition-based stats.
Identities = 39/244 (15%), Positives = 74/244 (30%), Gaps = 58/244 (23%)
Query: 193 IKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGET----- 247
+K P VS++G+ + GK+TL + I + V + + T I + +
Sbjct: 1 MKIRSPIVSVLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATEIPMDVIEGICGDFL 60
Query: 248 ----VLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLE 303
+ G A + A L + ++D + + EA+N
Sbjct: 61 KKFSIRETLPGLFFIDTPGHEAFTTLRKRGGALADLAILIVDINEGFKPQTQEALNI--- 117
Query: 304 EIDAHEIPTLLVMNKIDMLE---------------------------DFEPRIDRDEENK 336
+ + P ++ NKID + + + E
Sbjct: 118 -LRMYRTPFVVAANKIDRIHGWRVHEGRPFMETFSKQDIQVQQKLDTKVYELVGKLHEEG 176
Query: 337 PN---------------RVWLSAQTGAGIPQLFQ---ALTERLSGEVAQHTLRLPPQEGR 378
+ +SA TG GIP+L L ++ E + P +
Sbjct: 177 FESERFDRVTDFASQVSIIPISAITGEGIPELLTMLMGLAQQYLREQLKIEEDSPARGTI 236
Query: 379 LRSR 382
L +
Sbjct: 237 LEVK 240
>6N8J-m nrPDB
Length = 486
Score = 44.7 bits (104), Expect = 7e-05, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 5/71 (7%)
Query: 199 TVSLVGYTNAGKSTLFNRITEARV-YAADQLFATLDPTLRRIDVADVGETVLADTVGFIR 257
+V +GY N GKS++ N + + +V A T + + L D G +
Sbjct: 317 SVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITL----MKRIFLIDCPGIVP 372
Query: 258 HLPHDLVAAFK 268
D
Sbjct: 373 PSSKDSEEDIL 383
Score = 31.6 bits (70), Expect = 0.70, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 274 TRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDML 322
+ +++HV+DA D + +E + + V+NK D++
Sbjct: 219 IDSSDVVIHVLDARDPLGTRCKSVEEYMKKETPHKHL--IYVLNKCDLV 265
>2H57-A nrPDB
Length = 190
Score = 44.7 bits (104), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 69/174 (39%), Gaps = 24/174 (13%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
V +G N+GK+T+ N++ + + + L + + L+ TV
Sbjct: 24 VLCLGLDNSGKTTIINKLKPSNAQSQNILPT------IGFSIEKFKSSSLSFTV-----F 72
Query: 260 PHDLVAAFKATLQETR-QATLLLHVIDAAD----VRVQENIEAVNTVLEEIDAHEIPTLL 314
++ + + ++ VID++D V +E ++ + +I IP L
Sbjct: 73 DMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLN-HPDIKHRRIPILF 131
Query: 315 VMNKIDMLEDF------EPRIDRDEENKPNRVWLS-AQTGAGIPQLFQALTERL 361
NK+D+ + + + ++KP + S A G G+ + L +++
Sbjct: 132 FANKMDLRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVDWLQDQI 185
>6FT6-s nrPDB
Length = 520
Score = 44.7 bits (104), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 18/149 (12%)
Query: 167 LRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEAR----- 221
++ Q + +E + S +K + V ++GY N GKS++ N + R
Sbjct: 251 FNRKLSQTTTASALLESLKTYSNNSNLKRSI-VVGVIGYPNVGKSSVINALLARRGGQSK 309
Query: 222 -VYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLL 280
++ T LR I + + + + D+ G K + E L
Sbjct: 310 ACPVGNEAGVTTS--LREIKIDN--KLKILDSPGICFPS-----ENKKRSKVEHEAELAL 360
Query: 281 LHVIDAADVRVQENIEAVNTVLEEIDAHE 309
L+ + A + + AV +++ + +
Sbjct: 361 LNALPAKHIV--DPYPAVLMLVKRLAKSD 387
Score = 41.6 bits (96), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/200 (19%), Positives = 67/200 (33%), Gaps = 14/200 (7%)
Query: 164 RRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVY 223
+ L R + Q RLE + +EQG + + ++ G + L +A
Sbjct: 69 MKDLEERELAKQQRLEARKAAKEQGVDAMDED------MIEDDENGLAALVESAQQAAAE 122
Query: 224 AADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHV 283
D +DV D + V L A K + ++L+V
Sbjct: 123 YEGTPSNDADVRDDELDVIDYNIDFYGEDVEGESELEKSRKAYDKIFKSVIDASDVILYV 182
Query: 284 IDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKID-----MLEDFEPRIDRDEENKPN 338
+DA D + + VL+ + +L++NK+D +LE + + P
Sbjct: 183 LDARDPESTRSRKVEEAVLQ---SQGKRLILILNKVDLIPPHVLEQWLNYLKSSFPTIPL 239
Query: 339 RVWLSAQTGAGIPQLFQALT 358
R A G + T
Sbjct: 240 RASSGAVNGTSFNRKLSQTT 259
>3T5D-A nrPDB
Length = 274
Score = 44.7 bits (104), Expect = 8e-05, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 77/229 (33%), Gaps = 40/229 (17%)
Query: 199 TVSLVGYTNAGKSTLFNRITEARVYAADQLF------ATLDPTLRRIDVADVG---ETVL 249
T+ +VG + GKSTL N + +Y+ + T+ ++ + + G +
Sbjct: 10 TLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLLLTI 69
Query: 250 ADTVGFIRHLPHD---------LVAAFKATLQETRQAT-----------LLLHVIDAADV 289
DT GF + + + + F+ L + L + +
Sbjct: 70 VDTPGFGDAVDNSNCWQPVIDYIDSKFEDYLNAESRVNRRQMPDNRVQCCLYFIAPSGHG 129
Query: 290 RVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFE------PRIDRDEENKPNRVWLS 343
+IE + + E+++ IP + K D L E + +E+K
Sbjct: 130 LKPLDIEFMKRLHEKVNI--IPLIA---KADTLTPEECQQFKKQIMKEIQEHKIKIYEFP 184
Query: 344 AQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKE 392
+L + + +RL V + R+R R Y E E
Sbjct: 185 ETDDEEENKLVKKIKDRLPLAVVGSNTIIEVNGKRVRGRQYPWGVAEVE 233
>2GAO-A nrPDB
Length = 208
Score = 44.3 bits (103), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 13/132 (9%)
Query: 198 PTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIR 257
+ +G NAGK+TL + + + R+ Q TL PT + +A + T D G
Sbjct: 36 GKLVFLGLDNAGKTTLLHMLKDDRL---GQHVPTLHPTSEELTIAGMTFTTF-DLGG--- 88
Query: 258 HLPHDLVAAFKATLQETRQATLLLHVID-AADVRVQENIEAVNTVLEEIDAHEIPTLLVM 316
+K L ++ ++D A R+ E+ +N ++ + +P L++
Sbjct: 89 --HEQARRVWKNYLPAI---NGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILG 143
Query: 317 NKIDMLEDFEPR 328
NKID +
Sbjct: 144 NKIDRTDAISEE 155
>1PUI-A nrPDB
Length = 210
Score = 43.9 bits (102), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 62/172 (36%), Gaps = 19/172 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGF-IRH 258
V+ G +NAGKS+ N +T + A + +VAD L D G+
Sbjct: 29 VAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKR--LVDLPGYGYAE 86
Query: 259 LPHDLVAAFKATLQETRQAT----LLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLL 314
+P ++ ++ L E + L+ ++D + + + + I L+
Sbjct: 87 VPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAV----DSNIAVLV 142
Query: 315 VMNKIDMLEDFEPRIDRDEENKPNRVW--------LSAQTGAGIPQLFQALT 358
++ K D L + + + + S+ G+ +L Q L
Sbjct: 143 LLTKADKLASGARKAQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLD 194
>4ZI3-A nrPDB
Length = 190
Score = 43.6 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 20/159 (12%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
+ L+G NAGK+TL ++ + T ++ + V D G +
Sbjct: 20 ILLLGLDNAGKTTLLKQLASEDISHITP---TQGFNIKSVQSQGFKLNVW-DIGGQRKIR 75
Query: 260 PHDLVAAFKATLQETRQATLLLHVID-AADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
P+ +L++VID A R +E + + +LEE +P L+ NK
Sbjct: 76 PY--------WRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANK 127
Query: 319 IDMLEDF---EPRIDRDEENKPNRVW----LSAQTGAGI 350
D+L E + +RVW SA TG G+
Sbjct: 128 QDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGV 166
>5T62-W nrPDB
Length = 651
Score = 43.2 bits (100), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 200 VSLVGYTNAGKSTLFNRITEA-RVYAADQLFATLDPTLRRIDVADVGETVLADTVGFI 256
+ LVGY N GKS+ N + A +V + T + I ++D +L D G +
Sbjct: 339 IGLVGYPNVGKSSTINSLVGAKKVSVSSTPGKT--KHFQTIKLSD--SVMLCDCPGLV 392
Score = 33.5 bits (75), Expect = 0.16, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 261 HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKID 320
+ +K + ++ L++ ++DA + + +++ V E LL++NK D
Sbjct: 182 ERNIEVWKQLWRVVERSDLVVQIVDARNPLLFRSVDLERYVKE--SDDRKANLLLVNKAD 239
Query: 321 MLEDFE 326
+L +
Sbjct: 240 LLTKKQ 245
>6N8N-W nrPDB
Length = 640
Score = 43.2 bits (100), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 44/129 (34%), Gaps = 9/129 (6%)
Query: 133 ATRLVRGWTHLERQKGGIGLRGPGETQLETDRRLLRNRIVQIQSRLERVEKQREQGRQSR 192
A +L+ + + + D +++ + +LE + +
Sbjct: 268 ANQLLEKQKEMGEDYREQDFEEADKEGFDADEKVMEKVKILSIDQLEELFLSKAPNEPLL 327
Query: 193 IKADVPT----VSLVGYTNAGKSTLFNRITEA-RVYAADQLFATLDPTLRRIDVADVGET 247
+ LVGY N GKS+ N + A +V + T + I ++D
Sbjct: 328 PPLPGQPPLINIGLVGYPNVGKSSTINSLVGAKKVSVSSTPGKT--KHFQTIKLSD--SV 383
Query: 248 VLADTVGFI 256
+L D G +
Sbjct: 384 MLCDCPGLV 392
Score = 33.5 bits (75), Expect = 0.18, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 261 HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKID 320
+ +K + ++ L++ ++DA + + +++ V E LL++NK D
Sbjct: 182 ERNIEVWKQLWRVVERSDLVVQIVDARNPLLFRSVDLERYVKE--SDDRKANLLLVNKAD 239
Query: 321 MLEDFE 326
+L +
Sbjct: 240 LLTKKQ 245
>1YZU-A nrPDB
Length = 170
Score = 43.2 bits (100), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 63/171 (36%), Gaps = 21/171 (12%)
Query: 200 VSLVGYTNAGKSTLF-----NRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVG 254
V L+G GK++L N+ + + F T + V + DT G
Sbjct: 9 VVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVN----LAIWDTAG 64
Query: 255 FIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLL 314
R H L + R + + V D D + ++ L ++ +EI +
Sbjct: 65 QERF--HALGPIYY------RDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCI 116
Query: 315 VMNKIDMLEDFEPRIDR----DEENKPNRVWLSAQTGAGIPQLFQALTERL 361
V NKID+ ++ I E SA+ GI +LF L +R+
Sbjct: 117 VGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRM 167
>5LZD-z nrPDB
Length = 614
Score = 43.2 bits (100), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 60/188 (31%), Gaps = 26/188 (13%)
Query: 199 TVSLVGYTNAGKSTLFNRITEARVYA---ADQLFATLDPTLRRIDVADVGETVLADTVGF 255
++ G+ + GK+TL IT + T+D D D G
Sbjct: 2 IIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGRVPGFIDVPGH 61
Query: 256 IRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTL-L 314
+ L + L L V+ D + + E + + P L +
Sbjct: 62 EKFLSN--------MLAGVGGIDHALLVVACDDGVMAQTREHLAI----LQLTGNPMLTV 109
Query: 315 VMNKIDMLED---------FEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEV 365
+ K D +++ + + + +A G G+ L + L + E
Sbjct: 110 ALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATEGRGMDALREHLLQLPEREH 169
Query: 366 A-QHTLRL 372
A QH+ RL
Sbjct: 170 ASQHSFRL 177
>3CBQ-A nrPDB
Length = 195
Score = 43.2 bits (100), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 54/148 (36%), Gaps = 7/148 (4%)
Query: 185 REQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADV 244
RE K + V LVG + GKSTL + +A + D RRI V
Sbjct: 11 RENLYFQGQKDGIFKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKE 70
Query: 245 GETVLA-DTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLE 303
T++ D D + +T A L++ + + E + +
Sbjct: 71 EVTLVVYDI-----WEQGDAGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVP-ETLLRLRA 124
Query: 304 EIDAHEIPTLLVMNKIDMLEDFEPRIDR 331
H++P +LV NK D+ E ++
Sbjct: 125 GRPHHDLPVILVGNKSDLARSREVSLEE 152
>1YVD-A nrPDB
Length = 169
Score = 43.2 bits (100), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 33/179 (18%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQL-----FATLDPTLRRIDVADVGETVLADTVG 254
V L+G T GKS++ R E F T + ++ + ++ DT G
Sbjct: 8 VCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQ----NELHKFLIWDTAG 63
Query: 255 FIRHLPHDLVAAFKATLQETRQ--ATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPT 312
R L + + V D +E + + E+ H P+
Sbjct: 64 QER----------FRALAPMYYRGSAAAIIVYDITK---EETFSTLKNWVRELRQHGPPS 110
Query: 313 LLVM---NKIDMLEDFEPRIDRDEENKPN-----RVWLSAQTGAGIPQLFQALTERLSG 363
++V NK D L D ++RD ++ + V SA+ I +LF ++ R+
Sbjct: 111 IVVAIAGNKCD-LTDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPS 168
>5LEF-A nrPDB
Length = 191
Score = 42.8 bits (99), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 60/169 (35%), Gaps = 13/169 (7%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
+ +G + GK++L R Q +D + + + D L DT G R
Sbjct: 12 LVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGLER- 70
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
R +T+ + V D +V + + ++ +LV NK
Sbjct: 71 -------FRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNK 123
Query: 319 IDMLEDFEPRIDRDEENKPNR----VWLSAQTGAGIPQLFQALTERLSG 363
D+ + + I+ E + SA+ G + QLF+ + L G
Sbjct: 124 TDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPG 172
>2QAG-C nrPDB
Length = 418
Score = 42.4 bits (98), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/246 (16%), Positives = 82/246 (33%), Gaps = 40/246 (16%)
Query: 182 EKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLF------ATLDPT 235
+ R+S + T+ +VG + GKSTL N + +Y+ + T+
Sbjct: 16 NLPNQVYRKSVKRGFEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVE 75
Query: 236 LRRIDVADVG---ETVLADTVGFIRHLPHD---------LVAAFKATLQETRQAT----- 278
++ + + G + DT GF + + + + F+ L +
Sbjct: 76 QSKVLIKEGGVQLLLTIVDTPGFGDAVDNSNCWQPVIDYIDSKFEDYLNAESRVNRRQMP 135
Query: 279 ------LLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFE------ 326
L + + +IE + + E+++ + ++ K D L E
Sbjct: 136 DNRVQCCLYFIAPSGHGLKPLDIEFMKRLHEKVN-----IIPLIAKADTLTPEECQQFKK 190
Query: 327 PRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQL 386
+ +E+K +L + + +RL V + R+R R Y
Sbjct: 191 QIMKEIQEHKIKIYEFPETDDEEENKLVKKIKDRLPLAVVGSNTIIEVNGKRVRGRQYPW 250
Query: 387 QAIEKE 392
E E
Sbjct: 251 GVAEVE 256
>6O62-A nrPDB
Length = 184
Score = 42.4 bits (98), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 71/192 (36%), Gaps = 19/192 (9%)
Query: 187 QGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATL---DPTLRRIDVAD 243
+G SR + + LVG + GKS L R E + + F T D +R I+
Sbjct: 4 KGTSSRAYDMIMKLLLVGDSGVGKSCLLLRFVEDK---FNPSFITTIGIDFKIRTIESKG 60
Query: 244 VG-ETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVL 302
+ + DT G R T R A ++ + D D R EN+E +
Sbjct: 61 KRIKLQVWDTAGQER--------FRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTV 112
Query: 303 EEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNR----VWLSAQTGAGIPQLFQALT 358
+ + LV NK D + + ++ +E + SA++ + +F L
Sbjct: 113 TQHANEDAQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELA 172
Query: 359 ERLSGEVAQHTL 370
+ + + +
Sbjct: 173 SIIQEKHVEENI 184
>5UB8-A nrPDB
Length = 222
Score = 42.4 bits (98), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/176 (21%), Positives = 63/176 (35%), Gaps = 13/176 (7%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
+ L+G + GKS L +R T + ++ R +++ + + DT G R+
Sbjct: 18 IVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQERY 77
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
T R A L V D A E++ L+E I LV NK
Sbjct: 78 --------RAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGNK 129
Query: 319 IDM----LEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTL 370
D+ E + EN SA + + F L + + +++H L
Sbjct: 130 SDLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQL 185
>3DEF-A nrPDB
Length = 262
Score = 42.0 bits (97), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 5/99 (5%)
Query: 188 GRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGET 247
G+ + + TV ++G GKS+ N + +V F + G T
Sbjct: 27 GKLKQKDMNSMTVLVLGKGGVGKSSTVNSLIGEQVVRVS-PFQAEGLRPVMVSRTMGGFT 85
Query: 248 V-LADTVGFIRH--LPHDLVAAFKATLQETRQATLLLHV 283
+ + DT G + + H + K L R +LL+V
Sbjct: 86 INIIDTPGLVEAGYVNHQALELIKGFLVN-RTIDVLLYV 123
>2IL1-A nrPDB
Length = 192
Score = 41.6 bits (96), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 49/122 (40%), Gaps = 9/122 (7%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
V ++G GK++L R T+ A + +D ++ +++ + DT G R
Sbjct: 29 VIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERF 88
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
T R A ++ V D +++ ++++ + + LLV NK
Sbjct: 89 NS--------ITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNK 140
Query: 319 ID 320
+D
Sbjct: 141 LD 142
>1Z0F-A nrPDB
Length = 179
Score = 41.6 bits (96), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 60/165 (36%), Gaps = 13/165 (7%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRHLP 260
++G GKS L ++ TE + A ++ R I+V+ + + DT G R
Sbjct: 20 IIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER--- 76
Query: 261 HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKID 320
T R A L V D ++ + T + +L+ NK D
Sbjct: 77 -----FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKAD 131
Query: 321 MLED----FEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERL 361
+ +E EEN + SA+TG + F +++
Sbjct: 132 LEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 176
>5SZI-A nrPDB
Length = 209
Score = 41.2 bits (95), Expect = 9e-04, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 69/180 (38%), Gaps = 13/180 (7%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRHLP 260
L+G + GK+ + R +E + +D +R I++ + + DT G R
Sbjct: 15 LIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER--- 71
Query: 261 HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKID 320
T R A ++ V D + + +NI +EE + ++ +++ NK D
Sbjct: 72 -----FRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 126
Query: 321 MLEDFEPRIDRDEEN----KPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQE 376
+ + + +R E+ + SA+ + F L + ++ + PQ
Sbjct: 127 VNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQG 186
>1KSG-A nrPDB
Length = 186
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 72/197 (36%), Gaps = 33/197 (16%)
Query: 178 LERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLR 237
L ++K +++ R+ R+ ++G NAGK+T+ + V T+ PTL
Sbjct: 6 LTILKKMKQKERELRL-------LMLGLDNAGKTTILKKFNGEDVD-------TISPTLG 51
Query: 238 -RIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIE 296
I + L + ++ L+ V+D+AD + ++ +
Sbjct: 52 FNIKTLEHRGFKLN----IWDVGGQKSLRSYWR--NYFESTDGLIWVVDSADRQRMQDCQ 105
Query: 297 A-VNTVLEEIDAHEIPTLLVMNKIDM-----LEDFEPR--IDRDEENKPNRVWLSAQTGA 348
+ ++L E L+ NK D+ + +D + SA TG
Sbjct: 106 RELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGE 165
Query: 349 ----GIPQLFQALTERL 361
GI L ++ R+
Sbjct: 166 DLLPGIDWLLDDISSRV 182
>3CPH-A nrPDB
Length = 213
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 68/179 (37%), Gaps = 20/179 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATL---DPTLRRIDVADVG-ETVLADTVGF 255
+ L+G + GKS L R E + + F T D ++ +D+ + L DT G
Sbjct: 23 ILLIGDSGVGKSCLLVRFVEDK---FNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79
Query: 256 IRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLV 315
R T R A ++ V D D R NI+ + E E LLV
Sbjct: 80 ER--------FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLV 131
Query: 316 MNKIDM----LEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTL 370
NK DM + + E P + SA+ + ++F L + + ++ + L
Sbjct: 132 GNKSDMETRVVTADQGEALAKELGIP-FIESSAKNDDNVNEIFFTLAKLIQEKIDSNKL 189
>4LHX-A nrPDB
Length = 186
Score = 40.9 bits (94), Expect = 0.001, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 69/180 (38%), Gaps = 13/180 (7%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRHLP 260
L+G + GK+ + R +E + +D +R I++ + + DT G R
Sbjct: 15 LIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER--- 71
Query: 261 HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKID 320
T R A ++ V D + + +NI +EE + ++ +++ NK D
Sbjct: 72 -----FRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 126
Query: 321 MLEDFEPRIDRDEEN----KPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQE 376
+ + + +R E+ + SA+ + F L + ++ + PQ
Sbjct: 127 VNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQG 186
>3CNO-A nrPDB
Length = 262
Score = 40.9 bits (94), Expect = 0.001, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 5/75 (6%)
Query: 183 KQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARV-YAADQLFATLDPTLRRIDV 241
+ R+ + + V +VG N GKST+ N++ R Q T ++
Sbjct: 85 EPRKVLLKKLSFDRLARVLIVGVPNTGKSTIINKLKGKRASSVGAQPGITKGIQWFSLE- 143
Query: 242 ADVGETVLADTVGFI 256
+ DT G +
Sbjct: 144 ---NGVKILDTPGIL 155
>3BFK-A nrPDB
Length = 181
Score = 40.5 bits (93), Expect = 0.001, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 57/169 (33%), Gaps = 16/169 (9%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG--ETVLADTVGFIR 257
+ L+G + GKS L +R T + ++ + I + + + + DT G R
Sbjct: 10 IVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQER 69
Query: 258 HLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMN 317
+ T R A L V D ENIE L + I LLV N
Sbjct: 70 Y--------RAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGN 121
Query: 318 KIDMLEDFEPRIDRDEENKPNRVWL-----SAQTGAGIPQLFQALTERL 361
K D L+ D D + L SA + F L +
Sbjct: 122 KSD-LKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEI 169
>4DJT-A nrPDB
Length = 218
Score = 40.5 bits (93), Expect = 0.001, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 20/169 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG---ETVLADTVGFI 256
+ L+G GK+T NR+ + R + + D G + + DT G
Sbjct: 14 ICLIGDGGVGKTTYINRVLDGRFE-KNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAG-- 70
Query: 257 RHLPHDLVAAFKATLQETRQ--ATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLL 314
KA L++ A+ + D +N+ + + +E P ++
Sbjct: 71 --------QEKKAVLKDVYYIGASGAILFFDVTSRITCQNLARWVKEFQAVVGNEAPIVV 122
Query: 315 VMNKIDMLEDFEPRIDRDEENKPNR----VWLSAQTGAGIPQLFQALTE 359
NKID+ + E + +SA+T F L
Sbjct: 123 CANKIDIKNRQKISKKLVMEVLKGKNYEYFEISAKTAHNFGLPFLHLAR 171
>1X3S-A nrPDB
Length = 195
Score = 40.5 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 66/170 (38%), Gaps = 19/170 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVA-DVGETVLADTVGFIRH 258
+ ++G + GKS+L R T+ +D ++ I V + + + DT G R
Sbjct: 18 ILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER- 76
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAH-EIPTLLVMN 317
T R A ++ V D ++ LE +I +LV N
Sbjct: 77 -------FRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGN 129
Query: 318 KIDMLEDFEPRIDRDEENKPNR------VWLSAQTGAGIPQLFQALTERL 361
KID +DR+E K R + SA+T G+ F+ L E++
Sbjct: 130 KID---KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 176
>6HLU-A nrPDB
Length = 974
Score = 40.1 bits (92), Expect = 0.002, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 75/194 (38%), Gaps = 20/194 (10%)
Query: 178 LERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEAR--VYAADQLF----AT 231
+ +E+ R +G ++ + V L+G AGK++L ++ +
Sbjct: 462 FQSIEEARSKG-EALVHLQEIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTK 520
Query: 232 LDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRV 291
P ++ ++ D + L F +++ A ++++ + ++D+
Sbjct: 521 QAPNIKGLENDDELKECLFH---FWDFGGQEIMHASHQFF--MTRSSVYMLLLDSR---T 572
Query: 292 QENIEAVNTVLEEIDAHEIPTLLVMNKID---MLEDFEPRIDRDEENKPNRV-WLSAQTG 347
N +E+ P ++VMNKID + +I+ NR +S + G
Sbjct: 573 DSNKHYWLRHIEKYGGKS-PVIVVMNKIDENPSYNIEQKKINERFPAIENRFHRISCKNG 631
Query: 348 AGIPQLFQALTERL 361
G+ + ++L +
Sbjct: 632 DGVESIAKSLKSAV 645
>2FFQ-A nrPDB
Length = 171
Score = 40.1 bits (92), Expect = 0.002, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 61/167 (36%), Gaps = 13/167 (7%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
+ +G + GK++L R Q +D + + + D L DT G R
Sbjct: 5 LVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER- 63
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
R +T+ + V D ++ + + ++ +LV NK
Sbjct: 64 -------FRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNK 116
Query: 319 IDMLEDFEPRIDRDEENKPNRVWL----SAQTGAGIPQLFQALTERL 361
D+ + + I+ E+ + SA+TG + QLF+ + L
Sbjct: 117 TDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL 163
>2AL7-A nrPDB
Length = 186
Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 12/128 (9%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPH 261
LVG +GK+T N I + T+ +R++ +V + D G R
Sbjct: 27 LVGLQYSGKTTFVNVIASGQFSEDMIP--TVGFNMRKVTKGNV-TIKIWDIGGQPRFRSM 83
Query: 262 DLVAAFKATLQETRQATLLLHVIDAADVRVQENIEA-VNTVLEEIDAHEIPTLLVMNKID 320
+ R ++++IDAAD E ++ +L++ IP L++ NK D
Sbjct: 84 --------WERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRD 135
Query: 321 MLEDFEPR 328
+ + +
Sbjct: 136 LPNALDEK 143
>2G3Y-A nrPDB
Length = 211
Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 55/168 (32%), Gaps = 12/168 (7%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGE--TVLADTVGFIR 257
V L+G GKSTL N + T R + D +L D
Sbjct: 40 VVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLD---MWE 96
Query: 258 HLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMN 317
+ + + A L+++ I ++ E + +IP +LV N
Sbjct: 97 NKGEN--EWLHDHCMQVGDAYLIVYSI-TDRASFEKASELRIQLRRARQTEDIPIILVGN 153
Query: 318 KIDMLEDFEPRIDRDEEN----KPNRVWLSAQTGAGIPQLFQALTERL 361
K D++ E + + SA + +LF+ + ++
Sbjct: 154 KSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQV 201
>3Q85-A nrPDB
Length = 169
Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 7/133 (5%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLA-DTVGFIRH 258
V LVG + GKSTL + A ++ + D RRI V T++ D
Sbjct: 5 VMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDI-----W 59
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
D + +T A L++ + + E + + H++P +LV NK
Sbjct: 60 EQGDAGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVP-ETLLRLRAGRPHHDLPVILVGNK 118
Query: 319 IDMLEDFEPRIDR 331
D+ E ++
Sbjct: 119 SDLARSREVSLEE 131
>3DPU-A nrPDB
Length = 535
Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats.
Identities = 32/194 (16%), Positives = 75/194 (38%), Gaps = 20/194 (10%)
Query: 178 LERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEAR--VYAADQLF----AT 231
+ +E+ R +G ++ + V L+G AGK++L ++ +
Sbjct: 23 FQSIEEARSKG-EALVHLQEIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTK 81
Query: 232 LDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRV 291
P ++ ++ D + L F +++ A ++++ + ++D+
Sbjct: 82 QAPNIKGLENDDELKECLFH---FWDFGGQEIMHASHQFF--MTRSSVYMLLLDSR---T 133
Query: 292 QENIEAVNTVLEEIDAHEIPTLLVMNKID---MLEDFEPRIDRDEENKPNRV-WLSAQTG 347
N +E+ P ++VMNKID + +I+ NR +S + G
Sbjct: 134 DSNKHYWLRHIEKYGGKS-PVIVVMNKIDENPSYNIEQKKINERFPAIENRFHRISCKNG 192
Query: 348 AGIPQLFQALTERL 361
G+ + ++L +
Sbjct: 193 DGVESIAKSLKSAV 206
>2OCY-C nrPDB
Length = 170
Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats.
Identities = 41/174 (23%), Positives = 66/174 (37%), Gaps = 20/174 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATL---DPTLRRIDVADVG-ETVLADTVGF 255
+ L+G + GKS L R E + + F T D ++ +D+ + L DT G
Sbjct: 6 ILLIGDSGVGKSCLLVRFVEDK---FNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 62
Query: 256 IRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLV 315
R T R A ++ V D D R NI+ + E E LLV
Sbjct: 63 ER--------FRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLV 114
Query: 316 MNKIDM----LEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEV 365
NK DM + + E P + SA+ + ++F L + + ++
Sbjct: 115 GNKSDMETRVVTADQGEALAKELGIP-FIESSAKNDDNVNEIFFTLAKLIQEKI 167
>2GIL-A nrPDB
Length = 162
Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 59/167 (35%), Gaps = 13/167 (7%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
+ +G + GK++L R Q +D + + + D L DT G R
Sbjct: 4 LVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER- 62
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
R +T+ + V D +V + + ++ +LV NK
Sbjct: 63 -------FRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNK 115
Query: 319 IDMLEDFEPRIDRDEENKPNR----VWLSAQTGAGIPQLFQALTERL 361
D+ + + I+ E + SA+ G + QLF+ + L
Sbjct: 116 TDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 162
>5A9Z-CA nrPDB
Length = 593
Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 52/137 (37%), Gaps = 29/137 (21%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVL---------- 249
++++ + + GK+TL +++ + + D T + + D+ +
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQ-QSGTFDSRAETQERVMDSNDLEKERGITILAKNTAAIKW 66
Query: 250 ------ADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLE 303
DT G D + + +L V+DA D + + V +
Sbjct: 67 DYRINIVDTPG-----HADFGGEVERVMSMV---DSVLLVVDAFDGPMPQT----RFVTK 114
Query: 304 EIDAHEIPTLLVMNKID 320
+ A+ + ++V+NK+D
Sbjct: 115 KAFAYGLKPIVVINKVD 131
>2YC4-C nrPDB
Length = 208
Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 45/130 (34%), Gaps = 16/130 (12%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVY-AADQLFAT-LDPTLRRIDVADVG---ETVLADTVG 254
V++VG GKS L + T D + ++ + + + D E L DT G
Sbjct: 23 VAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELFLLDTAG 82
Query: 255 FIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLE---EIDAHEIP 311
A + V D + + E+ +A +L+ +
Sbjct: 83 -----SDLYKEQISQYWNGVYYA---ILVFDVSSMESFESCKAWFELLKSARPDRERPLR 134
Query: 312 TLLVMNKIDM 321
+LV NK D+
Sbjct: 135 AVLVANKTDL 144
>3T1O-A nrPDB
Length = 198
Score = 38.9 bits (89), Expect = 0.004, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 274 TRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAH-----EIPTLLVMNKIDMLEDFEPR 328
R ++ V D+A R++ N E++ + E + + ++P ++ +NK D+ +
Sbjct: 95 LRGVDGIVFVADSAPNRLRANAESMRNMRENLAEYGLTLDDVPIVIQVNKRDLPDALPVE 154
Query: 329 IDRD----EENKPNRVWLSAQTGAGIPQLFQALTERLSGEVA 366
+ R E P + A G G+ + + ++ + VA
Sbjct: 155 MVRAVVDPEGKFPVLEAV-ATEGKGVFETLKEVSRLVLARVA 195
>2CJW-A nrPDB
Length = 192
Score = 38.9 bits (89), Expect = 0.004, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 17/183 (9%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGE--TVLADTVGFIR 257
V L+G GKSTL N + T R + D +L D
Sbjct: 9 VVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLD---MWE 65
Query: 258 HLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMN 317
+ + + A L+++ I ++ E + +IP +LV N
Sbjct: 66 NKGEN--EWLHDHCMQVGDAYLIVYSI-TDRASFEKASELRIQLRRARQTEDIPIILVGN 122
Query: 318 KIDMLEDFEPRIDRDEEN----KPNRVWLSAQTGAGIPQLFQALTERL-----SGEVAQH 368
K D++ E + + SA + +LF+ + ++ S E +
Sbjct: 123 KSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLRRDSKEKNER 182
Query: 369 TLR 371
L
Sbjct: 183 RLA 185
>1ZBD-A nrPDB
Length = 203
Score = 38.9 bits (89), Expect = 0.004, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 15/181 (8%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
+ ++G ++ GK++ R + A +D ++ I D + + DT G R+
Sbjct: 11 ILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGLERY 70
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
T R A + + D + ++ +T ++ LLV NK
Sbjct: 71 RT--------ITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNK 122
Query: 319 IDMLED-----FEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLP 373
DM ++ R D SA+ + Q F+ L + + ++++
Sbjct: 123 CDMEDERVVSSERGRQLADHLGF-EFFEASAKDNINVKQTFERLVDVICEKMSESLDTAD 181
Query: 374 P 374
P
Sbjct: 182 P 182
>3PEN-A nrPDB
Length = 403
Score = 38.9 bits (89), Expect = 0.004, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 58/186 (31%), Gaps = 30/186 (16%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLA--------- 250
+ +VG+ + GK+TL IT + + + + E +
Sbjct: 11 IGVVGHVDHGKTTLVQAITG---IWTSKKLGYAETNIGVCESCKKPEAYVTEPSCKSCGS 67
Query: 251 -DTVGFIRHLP----HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEI 305
D F+R + L + V+ A + Q L I
Sbjct: 68 DDEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQPQTREHFVALGII 127
Query: 306 DAHEIPTLLVMNKIDMLEDFEPRIDRDE----------ENKPNRVWLSAQTGAGIPQLFQ 355
+ ++V NK+D++ E + EN P + +SA I L +
Sbjct: 128 GVKNL--IIVQNKVDVVSKEEALSQYRQIKQFTKGTWAENVP-IIPVSALHKINIDSLIE 184
Query: 356 ALTERL 361
+ E +
Sbjct: 185 GIEEYI 190
>3TSO-A nrPDB
Length = 178
Score = 38.9 bits (89), Expect = 0.005, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 62/178 (34%), Gaps = 21/178 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQ-----LFATLDPTLRRIDVADVGETVLADTVG 254
V L+G + GK+ L +R T + F+T L V + + DT G
Sbjct: 13 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAV----KAQIWDTAG 68
Query: 255 FIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLL 314
R+ T R A L V D + +E L + I +L
Sbjct: 69 LERY--------RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVML 120
Query: 315 VMNKIDMLEDFEPRIDR----DEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQH 368
V NK D+ + E + E N + SA + F+ + + + +V++
Sbjct: 121 VGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 178
>3Q72-A nrPDB
Length = 166
Score = 38.9 bits (89), Expect = 0.005, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 42/137 (30%), Gaps = 18/137 (13%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQL-----FATLDPTLRRIDVADVGETVLADTVG 254
V L+G GKS L D T D R I V +++
Sbjct: 5 VLLLGAPGVGKSALARIFGG----VEDGPEAEAAGHTYD---RSIVVDGEEASLMV---- 53
Query: 255 FIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLL 314
D A ++++ + ++ E + ++P +L
Sbjct: 54 -YDIWEQDGGRWLPGHCMAMGDAYVIVYSV-TDKGSFEKASELRVQLRRARQTDDVPIIL 111
Query: 315 VMNKIDMLEDFEPRIDR 331
V NK D++ E +D
Sbjct: 112 VGNKSDLVRSREVSVDE 128
>2QPT-A nrPDB
Length = 550
Score = 38.6 bits (88), Expect = 0.005, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Query: 244 VGETVLADTVGFIRHLPHDL--VAAFKATLQ-ETRQATLLLHVIDAADVRVQENIEAVNT 300
+ + DT G + + F A L+ + L++ + DA + + + +
Sbjct: 153 LESISIIDTPGILSGAKQRVSRGYDFPAVLRWFAERVDLIILLFDAHKLEISDE---FSE 209
Query: 301 VLEEIDAHEIPTLLVMNKIDMLEDFE 326
+ + HE +V+NK DM+E +
Sbjct: 210 AIGALRGHEDKIRVVLNKADMVETQQ 235
>1S0U-A nrPDB
Length = 408
Score = 38.6 bits (88), Expect = 0.006, Method: Composition-based stats.
Identities = 34/192 (17%), Positives = 64/192 (33%), Gaps = 34/192 (17%)
Query: 200 VSLVGYTNAGKSTLFNRITE--------------------ARVYAADQLFATLDPTLRRI 239
+ +VG+ + GK++L +T A T R
Sbjct: 11 IGMVGHVDHGKTSLTKALTGVWTDRHSEELRRGISIRLGYADCEIRKCPQCGTYTTKPRC 70
Query: 240 DVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVN 299
+ ET V F+ H+ + A L + VI A + Q +
Sbjct: 71 P-NCLAETEFLRRVSFVDSPGHETLMATM--LSGASLMDGAILVIAANEPCPQPQTKEHL 127
Query: 300 TVLEEIDAHEIPTLLVMNKIDMLED---------FEPRIDRDEENKPNRVWLSAQTGAGI 350
LE + +I ++V NKID++++ + + + +SA A I
Sbjct: 128 MALEILGIDKI--IIVQNKIDLVDEKQAEENYEQIKEFVKGTIAENAPIIPISAHHEANI 185
Query: 351 PQLFQALTERLS 362
L +A+ + +
Sbjct: 186 DVLLKAIQDFIP 197
>6IF2-B nrPDB
Length = 186
Score = 38.6 bits (88), Expect = 0.006, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 64/179 (35%), Gaps = 22/179 (12%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRHLP 260
++G + GKS+L R + + +D +R +++ + + DT G R
Sbjct: 19 IIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGLER--- 75
Query: 261 HDLVAAFKATLQETRQ--ATLLLHVIDAADVRVQENIEAVNTVLEEIDAH--EIPTLLVM 316
T+ T ++ V D E+ V L EI+ + ++ +LV
Sbjct: 76 -------FRTITSTYYRGTHGVIVVYDVTS---AESFVNVKRWLHEINQNCDDVCRILVG 125
Query: 317 NKIDMLEDFEPRIDRDEE----NKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLR 371
NK D E + + SA+ + ++F +TE + + +
Sbjct: 126 NKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAK 184
>3CUE-F nrPDB
Length = 206
Score = 38.2 bits (87), Expect = 0.007, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 64/175 (36%), Gaps = 15/175 (8%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFAT-LDPTLRRIDVADVG-ETVLADTVGFIRHL 259
L+G + GKS L R ++ Y D + +D ++ +++ + + DT G R
Sbjct: 13 LIGNSGVGKSCLLLRFSDDT-YTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQER-- 69
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKI 319
T R + ++ V D D ++ ++ + LLV NK
Sbjct: 70 ------FRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKC 123
Query: 320 DMLEDFEPRID-RDEENKPNRVWL---SAQTGAGIPQLFQALTERLSGEVAQHTL 370
D+ + D E N++ SA + F + ++ ++Q L
Sbjct: 124 DLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNL 178
>5EE5-B nrPDB
Length = 171
Score = 38.2 bits (87), Expect = 0.007, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 20/170 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
+ ++G AGK+T+ R+ + T+ + + ++ + + D G
Sbjct: 10 ILILGLDGAGKTTILYRL-QVGEVVTTIP--TIGFNVETVTYKNL-KFQVWDLGGLTSIR 65
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLV-MNK 318
P+ +++V+D+ D ++ + E + L+V NK
Sbjct: 66 PY--------WRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANK 117
Query: 319 IDMLEDFEPRIDRDEENKPNR-------VWLSAQTGAGIPQLFQALTERL 361
DM + + P SA G G+ + + L E L
Sbjct: 118 QDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETL 167
>1Z22-A nrPDB
Length = 168
Score = 38.2 bits (87), Expect = 0.007, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 20/169 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFAT-LDPTLRRIDVADVG-ETVLADTVGFIR 257
+ +VG GKS++ R + ++ D +D R+I V D +L DT G
Sbjct: 8 MVVVGNGAVGKSSMIQRYCK-GIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEE 66
Query: 258 HLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEI--DAHEIPTLLV 315
A QA +L+ +E+ EA+++ E++ + +IPT LV
Sbjct: 67 ------FDAITKAYYRGAQACVLVF-----STTDRESFEAISSWREKVVAEVGDIPTALV 115
Query: 316 MNKIDMLEDF----EPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTER 360
NKID+L+D E + K S + + ++F+ L E+
Sbjct: 116 QNKIDLLDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEK 164
>4ARZ-A nrPDB
Length = 310
Score = 37.8 bits (86), Expect = 0.008, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 57/142 (40%), Gaps = 8/142 (5%)
Query: 202 LVGYTNAGKSTLFNRI-TEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLP 260
L+G + +GKS++ + I + + +L AT+D + L D G
Sbjct: 11 LMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWD-CGGQDVFM 69
Query: 261 HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIP--TLLVMNK 318
+ K + + +L+HV D V ++IE L+++ + ++++K
Sbjct: 70 ENYFTKQKDHIFQM--VQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLHK 127
Query: 319 IDM--LEDFEPRIDRDEENKPN 338
+D+ L+ E +N
Sbjct: 128 MDLVQLDKREELFQIMMKNLSE 149
>5LZY-jj nrPDB
Length = 710
Score = 37.8 bits (86), Expect = 0.010, Method: Composition-based stats.
Identities = 29/214 (13%), Positives = 70/214 (32%), Gaps = 42/214 (19%)
Query: 172 VQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRIT------------- 218
V+ +L + + + + + + + ++G+ +AGKSTL +
Sbjct: 261 VKKSGKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHK 320
Query: 219 ----EARVYAADQLFA-----TLDPTLRRIDVA--------DVGETVLADTVGFIRHLPH 261
+ A +A T + R + + L D G +P+
Sbjct: 321 YEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPN 380
Query: 262 DLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEE---IDAHEIPTL-LVMN 317
+ A + A + + V+DA+ + E E + + + L + +N
Sbjct: 381 MITGAAQ--------ADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVN 432
Query: 318 KIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIP 351
K+D + + R + + + + +
Sbjct: 433 KMDQVNWQQERFQEITGKLGHFLKQAGFKESDVG 466
>6BBQ-A nrPDB
Length = 520
Score = 37.8 bits (86), Expect = 0.010, Method: Composition-based stats.
Identities = 23/156 (14%), Positives = 60/156 (38%), Gaps = 15/156 (9%)
Query: 174 IQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLD 233
+ +R R+ ++ + + ++G AGK+T+ ++ + T+
Sbjct: 336 LATRKRRIANKKGKVLSKIFGNKEMRILMLGLDAAGKTTILYKL-KLGQSVTTIP--TVG 392
Query: 234 PTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQAT-LLLHVID-AADVRV 291
+ + +V + + D G + + T L+ V+D A R+
Sbjct: 393 FNVETVTYKNV-KFNVWDVGGL---------DKIRPLWRHYYTGTQGLIFVVDCADRDRI 442
Query: 292 QENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEP 327
E + ++ ++ + + + L+ NK D+ + +P
Sbjct: 443 DEARQELHRIINDREMRDAIILIFANKQDLPDAMKP 478
>5MVF-A nrPDB
Length = 523
Score = 37.8 bits (86), Expect = 0.010, Method: Composition-based stats.
Identities = 25/207 (12%), Positives = 61/207 (29%), Gaps = 48/207 (23%)
Query: 164 RRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVY 223
R L + +++ + R + + + P + LVG + GK+T + E
Sbjct: 11 RSLYQRKVLPL-EEAYRFHEFHSPALEDADFENKPMILLVGQYSTGKTTFIRYLLEQDFP 69
Query: 224 --AADQLFAT---------------------LDPTL------------------RRIDVA 242
T +DP ++
Sbjct: 70 GMRIGPEPTTDSFIAVMYGETEGSTPGNALVVDPKKPFRKLSRFGNAFLNRFMCSQLPNQ 129
Query: 243 DVGETVLADTVGFIRHLPHDL--VAAFKATLQ-ETRQATLLLHVIDAADVRVQENIEAVN 299
+ + D+ G + + F LQ + ++ + DA + + + +
Sbjct: 130 VLKSISIIDSPGILSGEKQRISRGYDFCQVLQWFAERVDRIILLFDAHKLDISDE---FS 186
Query: 300 TVLEEIDAHEIPTLLVMNKIDMLEDFE 326
++ + +V+NK D ++ +
Sbjct: 187 EAIKAFRGQDDKIRVVLNKADQVDTQQ 213
>2H16-A nrPDB
Length = 183
Score = 37.8 bits (86), Expect = 0.010, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 63/172 (36%), Gaps = 24/172 (13%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
V +VG NAGK+T+ + + V T+ + I + + ++ D G
Sbjct: 25 VIIVGLDNAGKTTILYQFSMNEVVHTSP---TIGSNVEEIVINNTR-FLMWDIGG----- 75
Query: 260 PHDLVAAFKATLQETRQATL--LLHVIDAADVRVQE-NIEAVNTVLEEIDAHEIPTLLVM 316
+ T ++ V+D+ D E + +L D + L+
Sbjct: 76 -----QESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFA 130
Query: 317 NKIDMLEDFEP-------RIDRDEENKPNRVWLSAQTGAGIPQLFQALTERL 361
NK D+ E ++ ++++ + A TG G+ Q + + RL
Sbjct: 131 NKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 182
>2P5S-A nrPDB
Length = 199
Score = 37.4 bits (85), Expect = 0.012, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 11/126 (8%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
+ L G GKS+ R+ + + + V +T++ D + L
Sbjct: 31 IVLAGDAAVGKSSFLMRLCKNEF---------RENISATLGVDFQMKTLIVDGERTVLQL 81
Query: 260 PHDLVAAFKATLQET--RQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMN 317
++ ++ R+A +L + D + NI ++E+ +P +LV N
Sbjct: 82 WDTAGQERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDAAHETVPIMLVGN 141
Query: 318 KIDMLE 323
K D+ +
Sbjct: 142 KADIRD 147
>5NZV-F nrPDB
Length = 181
Score = 37.4 bits (85), Expect = 0.013, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 62/170 (36%), Gaps = 20/170 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
+ +VG AGK+T+ ++ + T+ + + ++ TV D G R
Sbjct: 20 ILMVGLDGAGKTTVLYKL-KLGEVITTIP--TIGFNVETVQYKNISFTVW-DVGGQDR-- 73
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAAD-VRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
R ++ V+D+ D R+ E E + +L E + L+ NK
Sbjct: 74 ------IRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANK 127
Query: 319 IDMLEDF-EPRIDRDEENK--PNRVWL----SAQTGAGIPQLFQALTERL 361
D+ E I NR W A +G G+ + + L+ L
Sbjct: 128 QDLPEAMSAAEITEKLGLHSIRNRPWFIQATCATSGEGLYEGLEWLSNSL 177
>6DFF-C nrPDB
Length = 193
Score = 37.4 bits (85), Expect = 0.014, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 66/174 (37%), Gaps = 20/174 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
+ +VG AGK+T+ ++ + T+ + ++ ++ TV D G +
Sbjct: 32 ILMVGLDAAGKTTILYKL-KLGEIVTTIP--TIGFNVETVEYKNISFTVW-DVGGLDKIR 87
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVR-VQENIEAVNTVLEEIDAHEIPTLLVMNK 318
P L + Q L+ V+D+ D V E E + +L E + + L+ NK
Sbjct: 88 P--LWRHYFQNTQ------GLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANK 139
Query: 319 IDMLEDF-EPRIDRDEENK--PNRVW----LSAQTGAGIPQLFQALTERLSGEV 365
D+ I +R W A +G G+ + L+ +L +
Sbjct: 140 QDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK 193
>4ILE-A nrPDB
Length = 184
Score = 37.0 bits (84), Expect = 0.014, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 12/128 (9%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPH 261
LVG +GK+T N I + T+ +R+I +V L D G R
Sbjct: 27 LVGLQYSGKTTFVNVIASGQFNEDMIP--TVGFNMRKITKGNV-TIKLWDIGGQPRFRSM 83
Query: 262 DLVAAFKATLQETRQATLLLHVIDAADVRVQENIEA-VNTVLEEIDAHEIPTLLVMNKID 320
+ R + +++++DAAD E + ++ +L++ IP L++ NK D
Sbjct: 84 --------WERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRD 135
Query: 321 MLEDFEPR 328
+ + +
Sbjct: 136 LPGALDEK 143
>4WNR-A nrPDB
Length = 349
Score = 37.0 bits (84), Expect = 0.015, Method: Composition-based stats.
Identities = 37/193 (19%), Positives = 62/193 (32%), Gaps = 24/193 (12%)
Query: 179 ERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRR 238
E V + + + V LVG AGK++L R+ D +
Sbjct: 23 EAVINYFKSLEGEKKPLNEVKVLLVGDGEAGKTSLLKRLLGEG----------FDGNEHQ 72
Query: 239 IDVADVGETVLADTVGFIRHLPHDLVAAFKATLQE---TRQATLLLHVIDAADVRVQENI 295
++ + D I+ D + +L + V+D+
Sbjct: 73 TQGINIKKWGFKDKDKEIKVNFWDFGGQEIMHATHQFFLSKRSLYILVLDSRRD------ 126
Query: 296 EAVNTVLEEIDA--HEIPTLLVMNKIDMLEDFEPRIDRDEENKP---NRVWLSAQTGAGI 350
E L+ I + + P L+ +NKID FE +E P +S + GI
Sbjct: 127 EKAEYWLKHIRSFGGDSPVLVALNKIDENPSFELNRKFLQEKYPSIKGFFRISCKEDRGI 186
Query: 351 PQLFQALTERLSG 363
Q L + L
Sbjct: 187 EGFSQKLKKELLK 199
>5KU1-A nrPDB
Length = 424
Score = 37.0 bits (84), Expect = 0.015, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 56/157 (35%), Gaps = 24/157 (15%)
Query: 175 QSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDP 234
+R ++++ Q++Q +++ + +V +G N GKS + + + ++
Sbjct: 225 VTRDKKIDLQKKQTQRNVFRCNV-----IGVKNCGKSGVLQALLGRNLMRQKKI------ 273
Query: 235 TLRRIDVADVGETVLADTVGFIRHLP----HDLVAAFKATLQETRQATLLLHVIDAADVR 290
D +TV HD+ + T E ++ V D ++ +
Sbjct: 274 ------REDHKSYYAINTVYVYGQEKYLLLHDISESEFLTEAEI-ICDVVCLVYDVSNPK 326
Query: 291 VQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEP 327
E + IP L+V K D+ E +
Sbjct: 327 SFE--YCARIFKQHFMDSRIPCLIVAAKSDLHEVKQE 361
>3LRP-A nrPDB
Length = 181
Score = 37.0 bits (84), Expect = 0.015, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 63/175 (36%), Gaps = 22/175 (12%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
+ +VG AGK+T+ ++ + T+ + ++ ++ TV D G
Sbjct: 20 ILMVGLDAAGKTTILYKV-KLGEVVTTIP--TIGFNVETVEFRNISFTVW-DVGG----- 70
Query: 260 PHDLVAAFKATLQETRQ-ATLLLHVIDAADVRVQENI-EAVNTVLEEIDAHEIPTLLVMN 317
+ + L+ V+D+ D ++ E ++ ++ E + + L+ N
Sbjct: 71 ----QDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFAN 126
Query: 318 KIDM---LEDFEPRIDRDEENKPNRVWL----SAQTGAGIPQLFQALTERLSGEV 365
K D+ + E R W A G G+ + F LT L+
Sbjct: 127 KQDLPNAMSAAEVTEKLHLNTIRERNWFIQSTCATRGDGLYEGFDWLTTHLNNAK 181
>5LDD-C nrPDB
Length = 207
Score = 37.0 bits (84), Expect = 0.017, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 64/171 (37%), Gaps = 19/171 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETV-LADTVGFIRH 258
V ++G + GK++L N+ + A+ + D R + V D T+ L DT G R
Sbjct: 13 VIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQLWDTAGQERF 72
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVN-TVLEEIDAHEI---PTLL 314
L AF R A + V D + + + +++ L + + P ++
Sbjct: 73 --QSLGVAFY------RGADCCVLVFDVNNAKSFDALDSWRDEFLIQASPRDPENFPFVV 124
Query: 315 VMNKIDMLEDFEPRIDRDEENKPNR------VWLSAQTGAGIPQLFQALTE 359
+ KID+ E + + SA+ + + FQ +
Sbjct: 125 LGIKIDVEESKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIAR 175
>1J2J-A nrPDB
Length = 166
Score = 37.0 bits (84), Expect = 0.017, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 66/174 (37%), Gaps = 20/174 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
+ +VG AGK+T+ ++ + T+ + ++ ++ TV D G +
Sbjct: 5 ILMVGLDAAGKTTILYKL-KLGEIVTTIP--TIGFNVETVEYKNISFTVW-DVGGLDKIR 60
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVR-VQENIEAVNTVLEEIDAHEIPTLLVMNK 318
P L + Q L+ V+D+ D V E E + +L E + + L+ NK
Sbjct: 61 P--LWRHYFQNTQ------GLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANK 112
Query: 319 IDMLEDF-EPRIDRDEENK--PNRVW----LSAQTGAGIPQLFQALTERLSGEV 365
D+ I +R W A +G G+ + L+ +L +
Sbjct: 113 QDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK 166
>6CUM-A nrPDB
Length = 315
Score = 37.0 bits (84), Expect = 0.017, Method: Composition-based stats.
Identities = 48/268 (17%), Positives = 83/268 (30%), Gaps = 36/268 (13%)
Query: 143 LERQKGGIGLRGPGETQLETDRRLLRNRIVQIQSRLERVEKQREQGR--QSRIKADVPTV 200
LE Q G G G + + R ++ RL + + +G + A +
Sbjct: 12 LEAQTQGPGSMPHGVVDVPELITVARGGSMRAVGRLLTLVESDRRGEVLAALGPATPRVI 71
Query: 201 SLVGYTNAGKSTLFNRITEA----RVYAADQLFATLDPTLRRIDVADVGETV--LADTVG 254
+ G AGKST + A + A P + D + D
Sbjct: 72 GVTGPPGAGKSTTVGAMVGAYRERGLRVAVLAVDPSSPYSGGALLGDRIRMAAHINDPDV 131
Query: 255 FIRHLPHDL--------VAAFKATLQETRQATLLLHVIDA--ADVRVQENIEAVNTVLEE 304
IR + V A L ++L + +++ + + +L
Sbjct: 132 LIRSMAARGHLGGLAAAVPAAIRLLAALSYDLIVLETVGVGQSEIEIAAIADPTVVILNP 191
Query: 305 ----------IDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLF 354
E+ L+V+NK D + D E + L A G G+ +L
Sbjct: 192 GAGDAVQAAKAGVLEVADLVVVNKADRDGADQTVRDLRAETDVPVLKLVAAQGDGLHELI 251
Query: 355 QALTERLSGEVAQHTLRLPPQEGRLRSR 382
+A+ H P+ R R+R
Sbjct: 252 EAIE--------AHQRADTPERRRARAR 271
>4U5X-A nrPDB
Length = 178
Score = 37.0 bits (84), Expect = 0.018, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 25/178 (14%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVAD-VGETVLADTVGF--- 255
VG GK+ + T + + D + D + V V L DT G
Sbjct: 8 CVTVGDGAVGKTCMLICYTSNK-FPTDYIPTVFDNFSANVSVDGSVVNLGLWDTAGLEDY 66
Query: 256 --IRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTL 313
+R L + F + +A + + ++ + + A +P +
Sbjct: 67 SRLRPLSYRGADVFILSFSLISRA--------SYENVQKKWMPELRRF-----APGVPVV 113
Query: 314 LVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLR 371
LV K+D+ ED + P ++ + G + +L A+ Q ++
Sbjct: 114 LVGTKLDLRED-----RAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIK 166
>3JB9-B nrPDB
Length = 984
Score = 36.6 bits (83), Expect = 0.021, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 14/92 (15%)
Query: 247 TVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEID 306
DT G + + + ++ V+D + + +++
Sbjct: 212 FQCIDTPGHVDFVDEVAAPMAI--------SDGVVLVVDVIEGVMINTT----RIIKHAI 259
Query: 307 AHEIPTLLVMNKID--MLEDFEPRIDRDEENK 336
H++P +LV+NK+D +LE P D + +
Sbjct: 260 LHDMPIVLVLNKVDRLILELRLPPNDAYHKLR 291
>5NO4-Z nrPDB
Length = 313
Score = 36.6 bits (83), Expect = 0.022, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 19/156 (12%)
Query: 212 TLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATL 271
T+ + +T RV A ++ I A T + F + + +
Sbjct: 36 TIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVI 95
Query: 272 QETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLED-----FE 326
L L++ID L + +I ++V+NKID+L+D
Sbjct: 96 VSAILPELSLNIID--------------RYLVACETLQIEPIIVLNKIDLLDDEGMAFVN 141
Query: 327 PRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLS 362
++D + +S+ T G+ L +ALT R+S
Sbjct: 142 EQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRIS 177
Score = 30.5 bits (67), Expect = 1.6, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 37/134 (27%), Gaps = 23/134 (17%)
Query: 152 LRGPGETQLETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSL-VGYTNAGK 210
L G + + RN I R+ V + G + +A +S+ G + GK
Sbjct: 132 LDDEGMAFVNEQMDIYRN----IGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGK 187
Query: 211 STLFNRITEARVYAAD---------QLFATLDPTLRRIDVADVGETVLADTVGFIR---- 257
S+L N + + T L + D+ G
Sbjct: 188 SSLLNALLGLQKEILTNDISDNSGLGQHTTTAARLYHFPHGGD----VIDSPGVREFGLW 243
Query: 258 -HLPHDLVAAFKAT 270
P + F
Sbjct: 244 HLEPEQITQGFVEF 257
>4V5G-AZ nrPDB
Length = 406
Score = 36.6 bits (83), Expect = 0.023, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 68/190 (35%), Gaps = 24/190 (12%)
Query: 200 VSLVGYTNAGKSTLFNRIT------EARVYAADQLFATLDPTLRRIDVADVGETVLADTV 253
V +G+ + GK+TL +T V D P R + V +T
Sbjct: 15 VGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETA 74
Query: 254 GFIRHLPH----DLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHE 309
RH H K + Q + V+ AAD + + E +
Sbjct: 75 K--RHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLA----RQVG 128
Query: 310 IPTLLV-MNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQH 368
+P ++V MNK+DM++D E +D E + + G +P + R S +A
Sbjct: 129 VPYIVVFMNKVDMVDDPE-LLDLVEMEVRDLLNQYEFPGDEVPVI------RGSALLALE 181
Query: 369 TLRLPPQEGR 378
+ P+ R
Sbjct: 182 QMHRNPKTRR 191
>3BWD-D nrPDB
Length = 182
Score = 36.6 bits (83), Expect = 0.023, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 54/163 (33%), Gaps = 25/163 (15%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGF--- 255
VG GK+ L T + + D + D + V L DT G
Sbjct: 11 CVTVGDGAVGKTCLLISYT-SNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDY 69
Query: 256 --IRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTL 313
+R L + F +A+ + + + E A +P +
Sbjct: 70 NRLRPLSYRGADVFILAFSLISKASYE----NVSKKWIPELKH---------YAPGVPIV 116
Query: 314 LVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQA 356
LV K+D+ +D + ID P V ++ G + +L A
Sbjct: 117 LVGTKLDLRDDKQFFID-----HPGAVPITTVQGEELKKLIGA 154
>1ZUN-B nrPDB
Length = 434
Score = 36.6 bits (83), Expect = 0.023, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 53/184 (28%), Gaps = 40/184 (21%)
Query: 204 GYTNAGKSTLFNRITEARVYAADQL--FATLDPTLRRIDVADVGETVLADTVGFIRHLPH 261
G + GKSTL R+ + T D DV +L D + R
Sbjct: 31 GNVDDGKSTLIGRLLHDSKMIYEDHLEAITRDSKKSGTTGDDVDLALLVDGLQAEREQGI 90
Query: 262 DLVAAFKATLQETRQ----------------------ATLLLHVIDAADVRVQENIEAVN 299
+ A++ R+ L + ++DA + +
Sbjct: 91 TIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDLAIILVDARYGVQTQT-RRHS 149
Query: 300 TVLEEIDAHEIPTLLVMNKIDML---EDFEPRIDRDEENKPN----------RVWLSAQT 346
+ + I ++ +NK+D+ E I D V +SA
Sbjct: 150 YIASLLGIKHI--VVAINKMDLNGFDERVFESIKADYLKFAEGIAFKPTTMAFVPMSALK 207
Query: 347 GAGI 350
G +
Sbjct: 208 GDNV 211
>1YZG-A nrPDB
Length = 179
Score = 36.2 bits (82), Expect = 0.024, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 65/170 (38%), Gaps = 20/170 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
V +VG NAGK+T+ + V T+ + I V + ++ D G
Sbjct: 19 VIIVGLDNAGKTTILYQFLMNEVVHTSP---TIGSNVEEIVVKNT-HFLMWDIGG----- 69
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDA-ADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
L +++ T ++ V+D+ R+ E + +L D + L+ NK
Sbjct: 70 QESLRSSWNTYYSNTE---FIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANK 126
Query: 319 IDM------LEDFEPRIDRDEENKP-NRVWLSAQTGAGIPQLFQALTERL 361
DM E + ++ P + A TG G+ Q + +T R+
Sbjct: 127 QDMKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTSRI 176
>2B6H-A nrPDB
Length = 192
Score = 36.2 bits (82), Expect = 0.024, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 13/123 (10%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
+ +VG AGK+T+ ++ + T+ + ++ ++ TV D G +
Sbjct: 32 ILMVGLDAAGKTTILYKL-KLGEIVTTIP--TIGFNVETVEYKNICFTVW-DVGGQDKIR 87
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVR-VQENIEAVNTVLEEIDAHEIPTLLVMNK 318
P L + Q L+ V+D+ D VQE+ + + +L+E + + L+ NK
Sbjct: 88 P--LWRHYFQNTQ------GLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANK 139
Query: 319 IDM 321
DM
Sbjct: 140 QDM 142
>5W75-A nrPDB
Length = 392
Score = 36.2 bits (82), Expect = 0.027, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 71/194 (36%), Gaps = 30/194 (15%)
Query: 200 VSLVGYTNAGKSTLFNRITE-------ARVYAADQLFATLDPTLRRIDVA--------DV 244
V +G+ + GKSTL IT+ A+ DQ+ + R I + +
Sbjct: 7 VGTIGHVDHGKSTLTAAITKYLSLKGLAQYVPYDQIDKAPEEKARGITINITHVEYETEK 66
Query: 245 GETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEE 304
D G ++ + + A + + V+ A D + + E V
Sbjct: 67 RHYAHIDCPGHADYIKNMITGAAQM--------DGAILVVAATDGPMPQTREHVLLA--- 115
Query: 305 IDAHEIPTLLV-MNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSG 363
+P ++V +NK DM++D E I+ E + + G +P + + + L
Sbjct: 116 -RQVGVPYMIVFINKTDMVDDPE-LIELVEMEVRDLLSQYEYPGDEVPVIKGSALKALEA 173
Query: 364 -EVAQHTLRLPPQE 376
+ H P QE
Sbjct: 174 PDDPNHEAYKPIQE 187
>2YKR-W nrPDB
Length = 350
Score = 36.2 bits (82), Expect = 0.027, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 58/156 (37%), Gaps = 19/156 (12%)
Query: 212 TLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATL 271
T+ + +T RV A ++ I A T + F + + +
Sbjct: 69 TIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVI 128
Query: 272 QETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLED-----FE 326
L L++ID L + +I ++V+NKID+L+D
Sbjct: 129 VSAILPELSLNIID--------------RYLVACETLQIEPIIVLNKIDLLDDEGMAFVN 174
Query: 327 PRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLS 362
++D + +S+ T G+ L +ALT R+S
Sbjct: 175 EQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRIS 210
Score = 29.7 bits (65), Expect = 2.3, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 37/134 (27%), Gaps = 23/134 (17%)
Query: 152 LRGPGETQLETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSL-VGYTNAGK 210
L G + + RN I R+ V + G + +A +S+ G + GK
Sbjct: 165 LDDEGMAFVNEQMDIYRN----IGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGK 220
Query: 211 STLFNRITEARVYAAD---------QLFATLDPTLRRIDVADVGETVLADTVGFIRH--- 258
S+L N + + T L + D+ G
Sbjct: 221 SSLLNALLGLQKEILTNDVSDNSGLGQHTTTAARLYHFPHGGD----VIDSPGVREFGLW 276
Query: 259 --LPHDLVAAFKAT 270
P + F
Sbjct: 277 HLEPEQITQGFVEF 290
>1EK0-A nrPDB
Length = 170
Score = 35.9 bits (81), Expect = 0.034, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 58/173 (33%), Gaps = 20/173 (11%)
Query: 200 VSLVGYTNAGKSTL-FNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRH 258
+ L+G GKS++ ++ + T R + + DT G R
Sbjct: 6 LVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER- 64
Query: 259 LPHDLVAAFKATLQETRQ--ATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVM 316
A+L A L V D + L E + +I LV
Sbjct: 65 ---------FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVG 115
Query: 317 NKIDMLED-------FEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLS 362
NKIDML++ E EE SA+TG + +F + E++
Sbjct: 116 NKIDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIP 168
>2QAG-B nrPDB
Length = 427
Score = 35.9 bits (81), Expect = 0.037, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 79/220 (35%), Gaps = 27/220 (12%)
Query: 200 VSLVGYTNAGKSTLFNRITEAR----VYAADQLFATLDPTLRRIDVADVG-ETVLADTVG 254
+ VG T GKSTL + + + Q L + ++V + + TVG
Sbjct: 45 ILCVGETGLGKSTLMDTLFNTKFEGEPATHTQPGVQLQSNTYDLQESNVRLKLTIVSTVG 104
Query: 255 F---------IRHLPHDLVAAFKATLQETRQATLLLHVIDAADV--------RVQENIEA 297
F + + + A F+A LQE + +LH + + ++++
Sbjct: 105 FGDQINKEDSYKPIVEFIDAQFEAYLQEELKIRRVLHTYHDSRIHVCLYFIAPTGHSLKS 164
Query: 298 VNTVLEEIDAHEIPTLLVMNKIDMLEDFEP---RIDRDEENKPNRVWLSAQ--TGAGIPQ 352
++ V + ++ + ++ K D + E +I E N V + + +
Sbjct: 165 LDLVTMKKLDSKVNIIPIIAKADAISKSELTKFKIKITSELVSNGVQIYQFPTDDESVAE 224
Query: 353 LFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKE 392
+ + L V T L +R+R Y ++ E
Sbjct: 225 INGTMNAHLPFAVIGSTEELKIGNKMMRARQYPWGTVQVE 264
>1YZN-A nrPDB
Length = 185
Score = 35.9 bits (81), Expect = 0.038, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 60/166 (36%), Gaps = 15/166 (9%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFAT-LDPTLRRIDVADVG-ETVLADTVGFIRHL 259
L+G + GKS L R ++ Y D + +D ++ +++ + + DT G R
Sbjct: 26 LIGNSGVGKSCLLLRFSDDT-YTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQER-- 82
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKI 319
T R + ++ V D D ++ ++ + LLV NK
Sbjct: 83 ------FRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKC 136
Query: 320 DMLEDFEPRID-RDEENKPNRVWL---SAQTGAGIPQLFQALTERL 361
D+ + D E N++ SA + F + ++
Sbjct: 137 DLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQI 182
>6FAE-B nrPDB
Length = 213
Score = 35.9 bits (81), Expect = 0.039, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 66/174 (37%), Gaps = 20/174 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
+ +VG AGK+T+ ++ + T+ + ++ ++ TV D G +
Sbjct: 52 ILMVGLDAAGKTTILYKL-KLGEIVTTIP--TIGFNVETVEYKNISFTVW-DVGGQDKIR 107
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVR-VQENIEAVNTVLEEIDAHEIPTLLVMNK 318
P L + Q L+ V+D+ D V E E + +L E + + L+ NK
Sbjct: 108 P--LWRHYFQNTQ------GLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANK 159
Query: 319 IDMLEDF-EPRIDRDEENK--PNRVW----LSAQTGAGIPQLFQALTERLSGEV 365
D+ I +R W A +G G+ + L+ +L +
Sbjct: 160 QDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK 213
>5CYO-A nrPDB
Length = 274
Score = 35.9 bits (81), Expect = 0.039, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG----------ETVL 249
+ +VG + GKSTL N + ++++ + + + I++ + + +
Sbjct: 7 IMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTV 66
Query: 250 ADTVGFIRHLPHDL 263
DT GF H+ ++
Sbjct: 67 IDTPGFGDHINNEN 80
>3RAB-A nrPDB
Length = 169
Score = 35.9 bits (81), Expect = 0.039, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 9/126 (7%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
+ ++G ++ GK++ R + A +D ++ I D + + DT G R+
Sbjct: 8 ILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERY 67
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
T R A + + D + ++ +T ++ LLV NK
Sbjct: 68 RT--------ITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNK 119
Query: 319 IDMLED 324
DM ++
Sbjct: 120 CDMEDE 125
>3O47-A nrPDB
Length = 329
Score = 35.9 bits (81), Expect = 0.039, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 66/174 (37%), Gaps = 20/174 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
+ +VG AGK+T+ ++ + T+ + ++ ++ TV D G +
Sbjct: 168 ILMVGLDAAGKTTILYKL-KLGEIVTTIP--TIGFNVETVEYKNISFTVW-DVGGQDKIR 223
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVR-VQENIEAVNTVLEEIDAHEIPTLLVMNK 318
P L + Q L+ V+D+ D V E E + +L E + + L+ NK
Sbjct: 224 P--LWRHYFQNTQ------GLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANK 275
Query: 319 IDMLEDF-EPRIDRDEENK--PNRVW----LSAQTGAGIPQLFQALTERLSGEV 365
D+ I +R W A +G G+ + L+ +L +
Sbjct: 276 QDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK 329
>4WA7-A nrPDB
Length = 170
Score = 35.9 bits (81), Expect = 0.040, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 47/147 (31%), Gaps = 13/147 (8%)
Query: 224 AADQLFATLDPTLRRIDVADVGETV-LADTVGFIRHLPHDLVAAFKATLQETRQATLLLH 282
+ D +++ + + + DT G + Q R L
Sbjct: 30 VDEYDPTIEDSYRKQVVIDGETCLLDILDTAGLEEYSAMRD--------QYMRTGEGFLC 81
Query: 283 VIDAADVRVQENIEAVNTVLEEIDAH-EIPTLLVMNKIDMLE---DFEPRIDRDEENKPN 338
V + + E+I ++ + ++P +LV NK D+ D + D
Sbjct: 82 VFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIP 141
Query: 339 RVWLSAQTGAGIPQLFQALTERLSGEV 365
+ SA+T G+ F L +
Sbjct: 142 FIETSAKTRQGVDDAFYTLVREIRKHK 168
>4J0Q-A nrPDB
Length = 433
Score = 35.5 bits (80), Expect = 0.041, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 15/151 (9%)
Query: 184 QREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYA---ADQLFATLDPTLRRID 240
+E+ +S +V T+ V + GK+TL +T A F +D
Sbjct: 38 AKEKFDRSLPHVNVGTIGHVDH---GKTTLTAALTRVCSEVFGSAIVEFDKIDSAPEEKA 94
Query: 241 VADVGETVLADTVGFIRHLPH----DLVAAFKATLQETRQATLLLHVIDAADVRVQENIE 296
T + IRH H K + Q + V AAD + + E
Sbjct: 95 RGITINTAHVEYNSTIRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTRE 154
Query: 297 AVNTVLEEIDAHEIPTLLV-MNKIDMLEDFE 326
+ +P ++V +NK D+++D E
Sbjct: 155 HILL----SRQVGVPYIVVFLNKADLVDDAE 181
>4V6V-A1 nrPDB
Length = 639
Score = 35.5 bits (80), Expect = 0.042, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 57/168 (33%), Gaps = 36/168 (21%)
Query: 195 ADVPTVSLVGYTNAGKSTLFNRITEARVYAAD------------------QLFATLDPTL 236
+ + ++ + +AGK+TL + A+ Q T+ +
Sbjct: 1 MKIINLGILAHVDAGKTTLTESLLYTSGAIAELGSVDEGTTRTDTMNLERQRGITIQTAV 60
Query: 237 RRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIE 296
DV + + DT G D +A +L + ++ A D +
Sbjct: 61 TSFQWEDV-KVNIIDTPG-----HMDFLAEVYRSLSVL---DGAVLLVSAKDGIQAQT-- 109
Query: 297 AVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSA 344
+ + +IPT+ +NKID + ID + + LS+
Sbjct: 110 --RILFHALQIMKIPTIFFINKID-----QEGIDLPMVYREMKAKLSS 150
>1WDT-A nrPDB
Length = 665
Score = 35.5 bits (80), Expect = 0.045, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 70/211 (33%), Gaps = 35/211 (16%)
Query: 197 VPTVSLVGYTNAGKSTLFNRIT-----EARVYAADQLFATLD----PTLRRIDVAD---- 243
+ TV+LVG+ +GK+TL + + R ++ T D L R V
Sbjct: 9 IRTVALVGHAGSGKTTLTEALLYKTGAKERRGRVEEGTTTTDYTPEAKLHRTTVRTGVAP 68
Query: 244 ----VGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVN 299
L D G+ D V + L A L + A E
Sbjct: 69 LLFRGHRVFLLDAPGY-----GDFVGEIRGAL---EAADAALVAVSAEAGVQVGT-ERAW 119
Query: 300 TVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWL-----SAQTGAGIPQLF 354
TV E + +P ++V+ K+D D+ ++ + + G+ +F
Sbjct: 120 TVAERL---GLPRMVVVTKLDKGGDYYALLEDLRSTLGPILPIDLPLYEGGKWVGLIDVF 176
Query: 355 QALTERLSGEVAQHTLRLPPQEGRLRSRFYQ 385
R + +PP+E RF Q
Sbjct: 177 HGKAYRYENG-EEREAEVPPEERERVQRFRQ 206
>5XR6-A nrPDB
Length = 194
Score = 35.5 bits (80), Expect = 0.048, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 61/182 (33%), Gaps = 29/182 (15%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQ-----LFATLDPTLRRIDVADVGETVLADTVG 254
+ L+G + GKS L +R T+ + FAT + V + + DT G
Sbjct: 28 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVV----KAQIWDTAG 83
Query: 255 FIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLL 314
R+ T R A L + D E L E+ H P ++
Sbjct: 84 QERY--------RAITSAYYRGAVGALLIYDVTRHAT---FENAARWLRELRGHTDPNIV 132
Query: 315 VM---NKIDMLEDFEPRIDRDEENKPNRVWL-----SAQTGAGIPQLFQALTERLSGEVA 366
VM NK D+ + + + R L SA + F + ++ V+
Sbjct: 133 VMLIGNKCDLRHLVAVK-TEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVS 191
Query: 367 QH 368
+
Sbjct: 192 KR 193
>3P27-A nrPDB
Length = 483
Score = 35.5 bits (80), Expect = 0.048, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 67/205 (32%), Gaps = 55/205 (26%)
Query: 199 TVSLVGYTNAGKSTLFNRITEARVYA-----------------ADQLFA-----TLDPTL 236
+ ++G+ +AGKSTL R+ + FA T +
Sbjct: 35 SFVVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERE 94
Query: 237 RRIDVA--------DVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVID--- 285
R + V+ + D G +P+ ++ QA + + +D
Sbjct: 95 RGVTVSICTSHFSTHRANFTIVDAPGHRDFVPNAIMG--------ISQADMAILCVDCST 146
Query: 286 -AADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRD------------ 332
A + + + +L ++ MNK+D ++ + R +
Sbjct: 147 NAFESGFDLDGQTKEHMLLASSLGIHNLIIAMNKMDNVDWSQQRFEEIKSKLLPYLVDIG 206
Query: 333 -EENKPNRVWLSAQTGAGIPQLFQA 356
E+ N V +S +G G+ ++
Sbjct: 207 FFEDNINWVPISGFSGEGVYKIEYT 231
>1U0L-A nrPDB
Length = 301
Score = 35.5 bits (80), Expect = 0.049, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 273 ETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFE-PRIDR 331
++ V+ I VL E +E+ T++V+NK+D+ ++ + ++
Sbjct: 81 HVANVDQVILVVTVKMPETSTYIIDKFLVLAE--KNELETVMVINKMDLYDEDDLRKVRE 138
Query: 332 DEENKPNRVWL---SAQTGAGIPQLFQALTERLS 362
EE + SA+TG GI +L + L ++S
Sbjct: 139 LEEIYSGLYPIVKTSAKTGMGIEELKEYLKGKIS 172
Score = 28.2 bits (61), Expect = 7.6, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 4/66 (6%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGET----VLADTVGFIR 257
+ G + GKS+L N I ++ L A + + + DT GF
Sbjct: 174 MAGLSGVGKSSLLNAINPGLKLRVSEVSEKLQRGRHTTTTAQLLKFDFGGYVVDTPGFAN 233
Query: 258 HLPHDL 263
+D+
Sbjct: 234 LEINDI 239
>5KCS-1w nrPDB
Length = 639
Score = 35.5 bits (80), Expect = 0.050, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 46/143 (32%), Gaps = 29/143 (20%)
Query: 195 ADVPTVSLVGYTNAGKSTLFNRITEARVYAADQ----LFATLDPT-----LRRIDVA--- 242
+ + ++ + +AGK+TL + + T R I +
Sbjct: 1 MKIINIGVLAHVDAGKTTLTESLLYNSGAITELGSVDKGTTRTDNTLLERQRGITIQTGI 60
Query: 243 -----DVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEA 297
+ + + DT G D +A +L + +I A D +
Sbjct: 61 TSFQWENTKVNIIDTPG-----HMDFLAEVYRSLSVL---DGAILLISAKDGVQAQT--- 109
Query: 298 VNTVLEEIDAHEIPTLLVMNKID 320
+ + IPT+ +NKID
Sbjct: 110 -RILFHALRKMGIPTIFFINKID 131
>4PHF-A nrPDB
Length = 184
Score = 35.5 bits (80), Expect = 0.052, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 66/185 (35%), Gaps = 22/185 (11%)
Query: 188 GRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGET 247
G S K ++ V ++G + GK++L +R + + D + + V
Sbjct: 1 GHMSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVA 60
Query: 248 VLA--DTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVN-TVLEE 304
+ DT G R L AF R A + V D + ENI++ L
Sbjct: 61 TMQVWDTAGQERF--QSLGVAFY------RGADCCVLVYDVTNASSFENIKSWRDEFLVH 112
Query: 305 IDAHEI---PTLLVMNKID-------MLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLF 354
+ + P +++ NKID + E + + + P SA+ + F
Sbjct: 113 ANVNSPETFPFVILGNKIDAEESKKIVSEKSAQELAKSLGDIP-LFLTSAKNAINVDTAF 171
Query: 355 QALTE 359
+ +
Sbjct: 172 EEIAR 176
>4A2I-V nrPDB
Length = 277
Score = 35.1 bits (79), Expect = 0.053, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 9/128 (7%)
Query: 244 VGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVID----AADVRVQENIEAVN 299
+ V D V + +V A T TR + ID + + + ++ ++
Sbjct: 36 IRSLVTGDRVVWRPGKVKGIVEAVHETSVLTRPVKPIAANIDQIVIVSAILPELSLNIID 95
Query: 300 TVLEEIDAHEIPTLLVMNKIDMLED-----FEPRIDRDEENKPNRVWLSAQTGAGIPQLF 354
L + ++ L+V+NKID+L+D ++D + +S+ T G+ L
Sbjct: 96 RYLVGCETLQVEPLIVLNKIDLLDDEGMDFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLE 155
Query: 355 QALTERLS 362
+ALT R+S
Sbjct: 156 EALTGRIS 163
Score = 30.5 bits (67), Expect = 1.4, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 32/100 (32%), Gaps = 14/100 (14%)
Query: 177 RLERVEKQREQGRQSRIKADVPTVSL-VGYTNAGKSTLFNRITEARVYAADQLFATLDPT 235
R+ V + G + +A +S+ G + GKS+L N + + +++
Sbjct: 139 RVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQ----NEILTNTAAR 194
Query: 236 LRRIDVADVGETVLADTVGFIR-----HLPHDLVAAFKAT 270
L + D+ G P + F
Sbjct: 195 LYHFPHGGD----VIDSPGVREFGLWHLEPEQITQGFVEF 230
>3D6T-B nrPDB
Length = 171
Score = 35.1 bits (79), Expect = 0.054, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 16/134 (11%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFAT--LDPTLRRIDVADVGETVLA----DTVGF 255
+VG T +GK+TL ++ + + AT +D I + D + L D G
Sbjct: 5 IVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWDFAGR 64
Query: 256 IRHLPHDLVAAFKATLQETRQATLL-LHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLL 314
F +T L L V D + + + + + A P +L
Sbjct: 65 ---------EEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSSPVIL 115
Query: 315 VMNKIDMLEDFEPR 328
V +D+ ++ + +
Sbjct: 116 VGTHLDVSDEKQRK 129
>3IZQ-1 nrPDB
Length = 611
Score = 35.1 bits (79), Expect = 0.059, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 67/205 (32%), Gaps = 55/205 (26%)
Query: 199 TVSLVGYTNAGKSTLFNRITEARVYA-----------------ADQLFA-----TLDPTL 236
+ ++G+ +AGKSTL R+ + FA T +
Sbjct: 169 SFVVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERE 228
Query: 237 RRIDVA--------DVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVID--- 285
R + V+ + D G +P+ ++ QA + + +D
Sbjct: 229 RGVTVSICTSHFSTHRANFTIVDAPGHRDFVPNAIMG--------ISQADMAILCVDCST 280
Query: 286 -AADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRD------------ 332
A + + + +L ++ MNK+D ++ + R +
Sbjct: 281 NAFESGFDLDGQTKEHMLLASSLGIHNLIIAMNKMDNVDWSQQRFEEIKSKLLPYLVDIG 340
Query: 333 -EENKPNRVWLSAQTGAGIPQLFQA 356
E+ N V +S +G G+ ++
Sbjct: 341 FFEDNINWVPISGFSGEGVYKIEYT 365
>4ZV4-A nrPDB
Length = 405
Score = 35.1 bits (79), Expect = 0.060, Method: Composition-based stats.
Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 31/159 (19%)
Query: 184 QREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEA-------RVYAADQLFATLDPTL 236
+E+ +++ +V T+ V + GK+TL +T+ A DQ+ +
Sbjct: 2 AKEKFERNKPHVNVGTIGHVDH---GKTTLTAALTKVCSDTWGGSARAFDQIDNAPEEKA 58
Query: 237 RRIDVAD--------VGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAAD 288
R I + V D G ++ + + A + + V AAD
Sbjct: 59 RGITINTSHVEYDSAVRHYAHVDCPGHADYVKNMITGAAQM--------DGAILVCSAAD 110
Query: 289 VRVQENIEAVNTVLEEIDAHEIPTLLV-MNKIDMLEDFE 326
+ + E + +P ++V +NK DM++D E
Sbjct: 111 GPMPQTREHILL----SRQVGVPYIVVFLNKADMVDDAE 145
>4V89-AW nrPDB
Length = 534
Score = 35.1 bits (79), Expect = 0.060, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 59/182 (32%), Gaps = 37/182 (20%)
Query: 199 TVSLVGYTNAGKSTLFNRITEARVYAAD-----QLFATLDPTLRRIDVADVGETV----- 248
T +++ + +AGK+T+ ++ + +++
Sbjct: 15 TFAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSNQHAKSDWMEMEKQRGISITTSV 74
Query: 249 -----------LADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEA 297
L DT G D TL L VIDAA +
Sbjct: 75 MQFPYHDCLVNLLDTPG-----HEDFSEDTYRTLTAV---DCCLMVIDAAKGV----EDR 122
Query: 298 VNTVLEEIDAHEIPTLLVMNKID-MLEDFEPRIDRDE-ENKPNRVWLSAQTGAGIPQLFQ 355
++E + P L MNK+D + D +D E E K ++ G G +LF+
Sbjct: 123 TRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVENELKIGCAPITWPIGCG--KLFK 180
Query: 356 AL 357
+
Sbjct: 181 GV 182
>2WBL-C nrPDB
Length = 180
Score = 35.1 bits (79), Expect = 0.064, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 53/161 (32%), Gaps = 19/161 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
VG GK+ + T + D + D + V L DT G
Sbjct: 9 CVTVGDGAVGKTCMLISYTG-NTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAG---- 63
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAH--EIPTLLVM 316
D + R A + L ENI L E+ + IP +LV
Sbjct: 64 -QEDYNRLRPLSY---RGADVFLLAFSLISKASYENIH--KKWLPELKHYAPGIPIVLVG 117
Query: 317 NKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQAL 357
K+D+ +D + ++ P ++ G + ++ A+
Sbjct: 118 TKLDLRDD-----KQFLKDHPGAASITTAQGEELRKMIGAV 153
>1Z6X-A nrPDB
Length = 180
Score = 34.7 bits (78), Expect = 0.071, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 65/172 (37%), Gaps = 20/172 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
+ +VG AGK+T+ ++ + T+ + ++ ++ TV D G R
Sbjct: 20 ILMVGLDAAGKTTILYKL-KLGEIVTTIP--TIGFNVETVEYKNICFTVW-DVGGQDRIR 75
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENI-EAVNTVLEEIDAHEIPTLLVMNK 318
P L + Q L+ V+D+ D + + + + +L + + LL NK
Sbjct: 76 P--LWKHYFQNTQ------GLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANK 127
Query: 319 IDMLEDF---EPRIDRDEENKPNRVW----LSAQTGAGIPQLFQALTERLSG 363
D+ E ++ NR W A G G+ + L+ LS
Sbjct: 128 QDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSK 179
>3CB4-D nrPDB
Length = 599
Score = 34.7 bits (78), Expect = 0.080, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 17/116 (14%)
Query: 249 LADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAH 308
DT G + D +L A L V+DA + + T +E
Sbjct: 75 FIDTPGHV-----DFSYEVSRSLAACEGA---LLVVDAGQGVEAQTLANCYTAME----M 122
Query: 309 EIPTLLVMNKIDM----LEDFEPRIDRDEENKP-NRVWLSAQTGAGIPQLFQALTE 359
++ + V+NKID+ E I+ + V SA+TG G+ + + L
Sbjct: 123 DLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVRCSAKTGVGVQDVLERLVR 178
>4RKE-A nrPDB
Length = 176
Score = 34.7 bits (78), Expect = 0.085, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 55/166 (33%), Gaps = 15/166 (9%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRHLP 260
++G T GKS L + T+ R L ++ R I + + + DT G
Sbjct: 15 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGLE---- 70
Query: 261 HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKID 320
A T R A L V D ++ + + +L+ NK D
Sbjct: 71 ----AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSD 126
Query: 321 MLEDFEPRIDRDEENKPNRVWL-----SAQTGAGIPQLFQALTERL 361
L+ + E L SA+T A + + F + +
Sbjct: 127 -LDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEI 171
>2NZJ-A nrPDB
Length = 175
Score = 34.3 bits (77), Expect = 0.093, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 7/133 (5%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGET-VLADTVGFIRH 258
V L+G GK++L + + D R + V T V+ DT
Sbjct: 7 VVLLGDPGVGKTSL-ASLFAGKQERDLHEQLGEDVYERTLTVDGEDTTLVVVDT---WEA 62
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
D + ++ LQ A ++++ I A + E + A +P +LV NK
Sbjct: 63 EKLDKSWSQESCLQG-GSAYVIVYSI-ADRGSFESASELRIQLRRTHQADHVPIILVGNK 120
Query: 319 IDMLEDFEPRIDR 331
D+ E ++
Sbjct: 121 ADLARCREVSVEE 133
>1EFM-A nrPDB
Length = 379
Score = 34.3 bits (77), Expect = 0.094, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 52/140 (37%), Gaps = 17/140 (12%)
Query: 184 QREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVAD 243
+E+ +++ +V T+ V + GK+TL IT + ++
Sbjct: 1 SKEKFERTKPHVNVGTIGHVDH---GKTTLTAAITTVLAKTYGGAARGITINTSHVEYDT 57
Query: 244 V-GETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVL 302
D G ++ + + A + + V+ A D + + E + +
Sbjct: 58 PTRHYAHVDCPGHADYVKNMITGAAQM--------DGAILVVAATDGPMPQTREHIL-LG 108
Query: 303 EEIDAHEIPTLLV-MNKIDM 321
++ +P ++V +NK DM
Sbjct: 109 RQV---GVPYIIVFLNKCDM 125
>3AQ4-A nrPDB
Length = 184
Score = 34.3 bits (77), Expect = 0.098, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 70/173 (40%), Gaps = 20/173 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
+ +VG AGK+T+ ++ + T+ + ++ ++ TV D G +
Sbjct: 23 ILMVGLDAAGKTTILYKL-KLGEIVTTIP--TIGFNVETVEYKNISFTVW-DVGGQDKIR 78
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAAD-VRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
P L + Q L+ V+D+ D RV E + ++ +L E + + L+ NK
Sbjct: 79 P--LWRHYFQNTQ------GLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 130
Query: 319 IDM-----LEDFEPRIDRDEENKPNRVWLS--AQTGAGIPQLFQALTERLSGE 364
D+ + ++ + + S A +G G+ + L+ ++ +
Sbjct: 131 QDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 183
>3ZZ0-A nrPDB
Length = 693
Score = 34.3 bits (77), Expect = 0.099, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 12/74 (16%)
Query: 249 LADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAH 308
+ DT G + D + +L+ + V+DA + TV + +
Sbjct: 79 IIDTPGHV-----DFTVEVERSLRVL---DGAVTVLDAQSGVEPQT----ETVWRQATTY 126
Query: 309 EIPTLLVMNKIDML 322
+P ++ +NK+D L
Sbjct: 127 GVPRIVFVNKMDKL 140
>5UF8-A nrPDB
Length = 181
Score = 34.3 bits (77), Expect = 0.10, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 66/171 (38%), Gaps = 22/171 (12%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
+ +VG AGK+T+ ++ + T+ + ++ ++ TV D G +
Sbjct: 20 ILMVGLDAAGKTTILYKL-KLGEIVTTIP--TIGFNVETVEYKNISFTVW-DVGGQDKIR 75
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAAD-VRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
P + ++ V+D+ D R+ E E + +L E + + L+ NK
Sbjct: 76 P--------LWRYYFQNTQGIIFVVDSNDRDRIAEAREELQQMLNEDELRDALLLVFANK 127
Query: 319 IDMLEDFEPRIDRDEENKPNRVW--------LSAQTGAGIPQLFQALTERL 361
D L + + E+ + + A TG G+ + + L+ L
Sbjct: 128 QD-LPNAMNAAEITEKLGLHSIRQRPWYIQATCATTGDGLYEGLEWLSTNL 177
>5WDQ-A nrPDB
Length = 170
Score = 34.3 bits (77), Expect = 0.10, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 51/150 (34%), Gaps = 17/150 (11%)
Query: 224 AADQLFATLDPTLRRIDVADVGETV-LADTVGFIRHLPHDLVAAFKATLQETRQATLLLH 282
+ D +++ + + + DT G + Q R L
Sbjct: 33 VDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRD--------QYMRTGEGFLC 84
Query: 283 VIDAADVRVQENIEAVNTVLEEIDAHE-IPTLLVMNKID-MLEDFEPRIDRDEENKPNRV 340
V + + E+I ++ + + +P +LV NK D E R +D
Sbjct: 85 VFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDAAARTVESRQAQDLARSYGIP 144
Query: 341 WL--SAQTGAGIPQLFQALTERLSGEVAQH 368
++ SA+T G+ F L E+ QH
Sbjct: 145 YIETSAKTRQGVEDAFYTL----VREIRQH 170
>4KU4-A nrPDB
Length = 206
Score = 34.3 bits (77), Expect = 0.11, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 71/196 (36%), Gaps = 30/196 (15%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGE-TVLADTVGFIRH 258
++++G GK++L +T+ V++ D R+ + + + DT G
Sbjct: 17 IAMLGEGGVGKTSLTVNLTK-HVFSETYDPTLEDSYRRQCVIDGIPSHLEILDTAG---- 71
Query: 259 LPHDLVAAFKATLQETRQATLLLHV-----IDAADVRVQENIEAVNTVLEEIDAHE---- 309
+ A + +++ ++ V +AA+ +E I+ + E
Sbjct: 72 -QEEYGALREQWIRQNELFVIVFDVTRRSSFEAAERLFEEVIQTKRKLDETRRHPGDRHP 130
Query: 310 -----IPTLLVM--NKIDMLEDFE----PRIDRDEENKPNRVWLSAQTGAGIPQLFQAL- 357
P+L+V+ NK D+ E ++ V SA+ G + + F ++
Sbjct: 131 DDLPFAPSLVVLVGNKCDLDTRREVGTLEGSSLAKKLGCGFVETSAKLGTNVEEAFFSVV 190
Query: 358 --TERLSGEVAQHTLR 371
R EV R
Sbjct: 191 RADRRRKREVTDEEQR 206
>3T5G-A nrPDB
Length = 181
Score = 34.3 bits (77), Expect = 0.11, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 11/124 (8%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGE-TVLADTVGFIRH 258
++++GY + GKS+L + E + + + + I V L DT G
Sbjct: 9 IAILGYRSVGKSSLTIQFVEGQ-FVDSYDPTIENTFTKLITVNGQEYHLQLVDTAG---- 63
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVN-TVLEEIDAHEIPTLLVMN 317
D + F T + V ++ E I+ ++ +L+ + +IP +LV N
Sbjct: 64 --QDEYSIFPQTYSI--DINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGN 119
Query: 318 KIDM 321
K D+
Sbjct: 120 KKDL 123
>3IHW-A nrPDB
Length = 184
Score = 34.3 bits (77), Expect = 0.11, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 58/175 (33%), Gaps = 28/175 (16%)
Query: 200 VSLVGYTNAGKSTLFNR-ITEARVYAADQLFATLDPTLRRIDVADVGETVLA-DTVGFIR 257
V +VG ++GKS L +R +T V + I V +L D G
Sbjct: 23 VGIVGNLSSGKSALVHRYLTGTYVQEESPEGG---RFKKEIVVDGQSYLLLIRDEGGPPE 79
Query: 258 HLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVN-TVLEEIDAHEIPTLLVM 316
LQ ++ V D + + + +A E+P +LV
Sbjct: 80 -------------LQFAAWVDAVVFVFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVG 126
Query: 317 NKIDMLEDFEPRIDRDEENKP--------NRVWLSAQTGAGIPQLFQALTERLSG 363
+ D + PR+ D + A G + ++FQ + +++
Sbjct: 127 TQ-DAISAANPRVIDDSRARKLSTDLKRCTYYETCATYGLNVERVFQDVAQKVVA 180
>5HCI-A nrPDB
Length = 261
Score = 34.3 bits (77), Expect = 0.11, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 58/164 (35%), Gaps = 32/164 (19%)
Query: 230 ATLDPTLRRID-VADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAAD 288
+D +R ++ D + + DT G I A + T++ +++D
Sbjct: 83 TKIDQVIRLVEQKKDKFQNCIIDTPGQIECFVWSASGAIITESFASSFPTVIAYIVDTPR 142
Query: 289 VRVQEN-IEAVNTVLEEIDAHEIPTLLVMNKIDM------------LEDFEPRIDRDEE- 334
+ + + ++P ++V NK D+ E F+ I D++
Sbjct: 143 NSSPTTFMSNMLYACSILYKTKLPMIVVFNKTDVCKADFAKEWMTDFESFQAAIKEDQDG 202
Query: 335 -----------------NKPNRVWLSAQTGAGIPQLFQALTERL 361
++ + V +S+ TG G + Q + +++
Sbjct: 203 YMSSLVNSMSLMLEEFYSQLDVVGVSSFTGDGFDEFMQCVDKKV 246
>4RKF-A nrPDB
Length = 190
Score = 33.9 bits (76), Expect = 0.12, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 65/171 (38%), Gaps = 13/171 (7%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRHLP 260
++G ++ GK++ R + +A +D ++ + D + + DT G R+
Sbjct: 28 IIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGLERYRT 87
Query: 261 HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKID 320
T R A + + D + +++ T ++ +LV NK D
Sbjct: 88 --------ITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCD 139
Query: 321 MLED----FEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQ 367
M + FE ++ SA+ + +F+ L + + ++++
Sbjct: 140 MEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSE 190
>3LXX-A nrPDB
Length = 239
Score = 33.9 bits (76), Expect = 0.13, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 59/187 (31%), Gaps = 20/187 (10%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPT-LRRIDVADVGETVLADTVGFIR- 257
+ LVG T AGKS N I +V+ + ++ +R E V+ DT G
Sbjct: 32 IVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETELVVVDTPGIFDT 91
Query: 258 --HLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLV 315
+ L + LL V+ +E +A +L+ +++
Sbjct: 92 EVPNAETSKEIIRCILLTSPGPHALLLVV-PLGRYTEEEHKATEKILKMFGERARSFMIL 150
Query: 316 M----------NKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQ-----LFQALTER 360
+ N D L + I + +R G Q L +R
Sbjct: 151 IFTRKDDLGDTNLHDYLREAPEDIQDLMDIFGDRYCALNNKATGAEQEAQRAQLLGLIQR 210
Query: 361 LSGEVAQ 367
+ E +
Sbjct: 211 VVRENKE 217
>6C2V-A nrPDB
Length = 115
Score = 33.9 bits (76), Expect = 0.13, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 150 IGLRGPGETQLETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAG 209
+G G G+T L+ R + + + R ++ ++ + + + V +VG + +G
Sbjct: 8 VGPSGAGKTTLDELARKAKEEVPDAEIRTVTTKEDAKRVAEEAERRNADIVVIVGPSGSG 67
Query: 210 KSTLFNRITE--ARVYAADQLFATLDPTLRRI 239
KSTL + + AR A T + + +
Sbjct: 68 KSTLAKIVKKIIARAGAKTIEVTTEEELRKAV 99
>3NXS-A nrPDB
Length = 329
Score = 33.9 bits (76), Expect = 0.14, Method: Composition-based stats.
Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 59/217 (27%)
Query: 200 VSLVGYTNAGKSTLFNRIT--------EARVYAADQ------------------------ 227
V + G GKST + V A D
Sbjct: 60 VGITGVPGVGKSTTIEALGMHLIEAGHRVAVLAVDPSSTRTGGSILGDKTRMARLAVHPD 119
Query: 228 ---LFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVI 284
+ TL + A VL + G+ L V ++ + + +
Sbjct: 120 AYIRPSPTSGTLGGVAKATRETIVLLEAAGYDVILVE-TVGVGQSEVTVAGMVDTFVFLT 178
Query: 285 DAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEEN--------- 335
A + I+ E+ ++V+NK D E + E +
Sbjct: 179 LARTGDQLQGIKK--------GVLELADVIVVNKADGEHAVEAKAAARELSGAIRLIYPR 230
Query: 336 ----KPNRVWLSAQTGAGIPQLFQALTERLSGEVAQH 368
+P + +SA G G+P+L++ + EV +
Sbjct: 231 ESLWRPPVLTMSAVEGTGLPELWETVLRH--REVLEE 265
>2NTY-C nrPDB
Length = 180
Score = 33.9 bits (76), Expect = 0.14, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 19/158 (12%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVA-DVGETVLADTVGFIRH 258
VG GK+ + T + + D + D + V + L DT G
Sbjct: 9 CVTVGDGAVGKTCMLISYT-SNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAG---- 63
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAH--EIPTLLVM 316
D + R A + + EN+ + E+ + +P +LV
Sbjct: 64 -QEDYNRLRPLSY---RGADVFILAFSLISKASYENV--AKKWIPELRHYAPGVPIILVG 117
Query: 317 NKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLF 354
K+D+ +D + ID P V ++ G + +L
Sbjct: 118 TKLDLRDDKQFFID-----HPGAVPITTNQGEELKKLI 150
>5VH6-A nrPDB
Length = 409
Score = 33.9 bits (76), Expect = 0.15, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 33/98 (33%), Gaps = 13/98 (13%)
Query: 225 ADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVI 284
+ T+ + DT G + D + +L+ + V+
Sbjct: 59 EQERGITITSAATTAQWKGYR-VNIIDTPGHV-----DFTVEVERSLRVL---DGAVAVL 109
Query: 285 DAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDML 322
DA + TV + + +P ++ +NK+D +
Sbjct: 110 DAQSGVEPQT----ETVWRQATTYGVPRIVFVNKMDKI 143
>2RHD-A nrPDB
Length = 175
Score = 33.9 bits (76), Expect = 0.15, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 15/170 (8%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFAT-LDPTLRRIDVADVG-ETVLADTVGFIRHL 259
L+G + GKS L R + Y + +D +R I + + + + DT G R
Sbjct: 14 LIGDSGVGKSCLLLRFADDT-YTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQER-- 70
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKI 319
T R A ++ V D D +N++ ++ + LLV NK
Sbjct: 71 ------FRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVGNKC 124
Query: 320 DMLEDFEPRIDR-DEENKPNRVWL---SAQTGAGIPQLFQALTERLSGEV 365
D++ D E + + SA+ + Q F + + V
Sbjct: 125 DLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEIKKRV 174
>5KSO-A nrPDB
Length = 190
Score = 33.9 bits (76), Expect = 0.15, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 47/142 (33%), Gaps = 19/142 (13%)
Query: 190 QSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVL 249
+ + + +V +++G N GKS + + + ++ D
Sbjct: 1 KKQTQRNVFRCNVIGVKNCGKSGVLQALLGRNLMRQKKI------------REDHKSYYA 48
Query: 250 ADTVGFIRHLP----HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEI 305
+TV HD+ + T E ++ V D ++ + E +
Sbjct: 49 INTVYVYGQEKYLLLHDISESEFLTEAEI-ICDVVCLVYDVSNPKSFE--YCARIFKQHF 105
Query: 306 DAHEIPTLLVMNKIDMLEDFEP 327
IP L+V K D+ E +
Sbjct: 106 MDSRIPCLIVAAKSDLHEVKQE 127
>3TR5-A nrPDB
Length = 528
Score = 33.5 bits (75), Expect = 0.16, Method: Composition-based stats.
Identities = 28/189 (14%), Positives = 58/189 (30%), Gaps = 35/189 (18%)
Query: 199 TVSLVGYTNAGKSTLFNRI----------------------TEARVYAADQLFATLDPTL 236
T +++ + +AGK+TL ++ T + Q ++ ++
Sbjct: 15 TFAIISHPDAGKTTLTEKLLLFGGAIQLAGTIKSRKAARHATSDWMELEKQRGISVTTSV 74
Query: 237 RRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIE 296
+ D L DT G + T + L VIDAA I+
Sbjct: 75 MQFPYKDY-LINLLDTPG--------HADFTEDTYRTLTAVDSALMVIDAAKGVEPRTIK 125
Query: 297 AVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQA 356
+ P + +NK+D + + E+ G+ + F+
Sbjct: 126 LMEV----CRLRHTPIMTFINKMDRDTRPSIELLDEIESILRIHCAPVTWPIGMGKYFKG 181
Query: 357 LTERLSGEV 365
+ + +
Sbjct: 182 IYHLIEDAI 190
>5JSZ-B nrPDB
Length = 287
Score = 33.5 bits (75), Expect = 0.17, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 200 VSLVGYTNAGKSTL---FNRITEARVYAADQLFATLDPTLRRIDVADVGETVLA 250
++LVG+T +GKSTL FN + + + T+ P + D+ V
Sbjct: 36 IALVGHTGSGKSTLMQHFNALLKPTSGKIEIAGYTITPETGNKGLKDLRRKVSL 89
>3FVQ-A nrPDB
Length = 359
Score = 33.2 bits (74), Expect = 0.20, Method: Composition-based stats.
Identities = 25/197 (12%), Positives = 60/197 (30%), Gaps = 20/197 (10%)
Query: 202 LVGYTNAGKSTLFNRITEARVY---AADQLFATLDPTLRRIDVADVGETVLADTV----- 253
++G + GK+TL + T+ + V + L
Sbjct: 35 IIGASGCGKTTLLRCLAGFEQPDSGEISLSGKTIFSKNTNLPVRERRLGYLVQEGVLFPH 94
Query: 254 -GFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV----NTVLEEIDAH 308
R++ + L T QE ++ +L + +++ + E
Sbjct: 95 LTVYRNIAYGLGNGKGRTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRAALARALA 154
Query: 309 EIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQH 368
P L+ +L++ +D + ++A G +F + + + A
Sbjct: 155 PDPELI------LLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADR 208
Query: 369 TLRLPPQEGRLRSRFYQ 385
+ + Q L++
Sbjct: 209 -IAVMKQGRILQTASPH 224
>3DZ8-A nrPDB
Length = 191
Score = 33.2 bits (74), Expect = 0.21, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 9/124 (7%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRHLP 260
++G ++ GK++ R + A +D ++ + + + + DT G R+
Sbjct: 28 IIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRT 87
Query: 261 HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKID 320
T R A + + D + ++ T ++ +LV NK D
Sbjct: 88 --------ITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCD 139
Query: 321 MLED 324
M E+
Sbjct: 140 MEEE 143
>2C4R-L nrPDB
Length = 517
Score = 33.2 bits (74), Expect = 0.23, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 56/137 (40%), Gaps = 10/137 (7%)
Query: 285 DAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDML-----EDFEPRIDRDEENKPNR 339
D + N+EA + + ++ ++ L+V++ IDM E R+ R
Sbjct: 321 DIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRAR 380
Query: 340 VWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLR----SRFYQLQAIEKEWME 395
+ +S + G+ ++ + GE + H G +R L+ IE+E ++
Sbjct: 381 IQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALK 440
Query: 396 EDGS-VSLQVRMPIVDW 411
E+ V V +PI +
Sbjct: 441 ENTQEVHAIVPVPIASY 457
>6GDG-D nrPDB
Length = 248
Score = 33.2 bits (74), Expect = 0.25, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 58/159 (36%), Gaps = 12/159 (7%)
Query: 182 EKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDV 241
+ +++ + ++ + L+G N+GKST+ ++ +
Sbjct: 20 KIEKQLQKDKQVYRATHRLLLLGADNSGKSTIVKQMRILHGGSGGS--GGTSGIFETKFQ 77
Query: 242 ADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAAD-VRVQENIEAVNT 300
D + D G + +Q T ++ V+D++D R+QE + +
Sbjct: 78 VDKVNFHMFDVGGQRD--------ERRKWIQCFNDVTAIIFVVDSSDYNRLQEALNLFKS 129
Query: 301 VLEEIDAHEIPTLLVMNKIDML-EDFEPRIDRDEENKPN 338
+ I +L +NK D+L E + E+ P
Sbjct: 130 IWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPE 168
>4YPL-A nrPDB
Length = 555
Score = 33.2 bits (74), Expect = 0.25, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 2/94 (2%)
Query: 171 IVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFA 230
+ ++ R+ R+ + ++ P + LVG GK++L I AR
Sbjct: 84 LKDVKERILEYLAVRQLTQGLDVRNKAPILVLVGPPGVGKTSLGRSI--ARSMNRKFHRI 141
Query: 231 TLDPTLRRIDVADVGETVLADTVGFIRHLPHDLV 264
+L ++ T + G + H +
Sbjct: 142 SLGGVRDEAEIRGHRRTYIGAMPGKLIHAMKQVG 175
>5SZJ-A nrPDB
Length = 202
Score = 33.2 bits (74), Expect = 0.25, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 66/168 (39%), Gaps = 13/168 (7%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRHLP 260
L+G + GK+ + R ++ +D ++ +++ + + DT G R
Sbjct: 16 LIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHT 75
Query: 261 HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKID 320
T R A ++ V D + + ENI ++E ++ +L+ NK D
Sbjct: 76 --------ITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 127
Query: 321 MLED-FEPRIDRDEENKPNRVWL---SAQTGAGIPQLFQALTERLSGE 364
M + P+ ++ + + + SA+ I + F L E + +
Sbjct: 128 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 175
>5W7Q-A nrPDB
Length = 373
Score = 32.8 bits (73), Expect = 0.28, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 28/138 (20%)
Query: 200 VSLVGYTNAGKSTLFNRIT-------EARVYAADQLFATLDPTLRRIDVA--------DV 244
+ +G+ + GK+TL IT A A DQ+ + R I + +
Sbjct: 8 IGTIGHVDHGKTTLTAAITTVLAKKGGAEAKAYDQIDNAPEEKARGITINTAHVEYETEN 67
Query: 245 GETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEE 304
D G ++ + + A + + V+ AAD + + E +
Sbjct: 68 RHYAHVDCPGHADYVKNMITGAAQM--------DGAILVVSAADGPMPQTREHILLA--- 116
Query: 305 IDAHEIPTLLV-MNKIDM 321
+P ++V +NK DM
Sbjct: 117 -RQVGVPYIVVFLNKCDM 133
>6MTD-v nrPDB
Length = 839
Score = 32.8 bits (73), Expect = 0.28, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 51/135 (37%), Gaps = 9/135 (6%)
Query: 193 IKADVPTVSLVGYTNAGKSTLFNRITEARVYAAD--QLFATLDPTLRRIDVADVGET-VL 249
KA++ +S++ + + GKSTL + + A + +T + D+
Sbjct: 14 KKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIARCITIKSTAISLFYELSENDLNFIKQS 73
Query: 250 ADTVGFIRHL--PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDA 307
D GF+ +L V R L V+D + TVL + A
Sbjct: 74 KDGAGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQT----ETVLRQAIA 129
Query: 308 HEIPTLLVMNKIDML 322
I +L+MNK+D
Sbjct: 130 ERIKPVLMMNKMDRA 144
>4JYC-A nrPDB
Length = 337
Score = 32.8 bits (73), Expect = 0.29, Method: Composition-based stats.
Identities = 35/225 (15%), Positives = 64/225 (28%), Gaps = 40/225 (17%)
Query: 200 VSLVGYTNAGKSTLFNRIT------EARVYAADQLFATLDPTLRRIDVADVGETVLADTV 253
V + G GKST + + +V ++ + + D
Sbjct: 58 VGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTGGSILGDKTRMARLAIDRN 117
Query: 254 GFIRHLPHDLVAAFKAT-------LQETRQATLLLH-----------VIDAADVRVQENI 295
FIR P A L E ++L V D D + +
Sbjct: 118 AFIRPSPSSGTLGGVAAKTRETMLLCEAAGFDVILVETVGVGQSETAVADLTDFFLVLML 177
Query: 296 EAVNTVLEEIDAH--EIPTLLVMNKIDMLEDFEPRIDRDEENK--------------PNR 339
L+ I E+ ++ +NK D + E + P
Sbjct: 178 PGAGDELQGIKKGIFELADMIAVNKADDGDGERRASAAASEYRAALHILTPPSATWTPPV 237
Query: 340 VWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFY 384
V +S G G+ L+ + + S A + +E ++ +
Sbjct: 238 VTISGLHGKGLDSLWSRIEDHRSKLTATGEIAGKRREQDVKWMWA 282
>3OES-A nrPDB
Length = 201
Score = 32.8 bits (73), Expect = 0.30, Method: Composition-based stats.
Identities = 38/186 (20%), Positives = 70/186 (37%), Gaps = 16/186 (8%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDV--ADVGETVLADTVGFIR 257
V ++GY GK++L ++ E T++ T +I D L DT G
Sbjct: 27 VVILGYRCVGKTSLAHQFVEGEFSEGYDP--TVENTYSKIVTLGKDEFHLHLVDTAGQDE 84
Query: 258 --HLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLV 315
LP+ + + L+ V +V E++ + E +P +LV
Sbjct: 85 YSILPYSFIIGVHGYV-------LVYSVTSLHSFQVIESL--YQKLHEGHGKTRVPVVLV 135
Query: 316 MNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQ 375
NK D+ + E + ++ + ++ A QL Q + ++ E+A+ Q
Sbjct: 136 GNKADLSPEREVQAVEGKKLAESWGATFMESSARENQLTQGIFTKVIQEIARVENSY-GQ 194
Query: 376 EGRLRS 381
E R
Sbjct: 195 ERRCHL 200
>5LPN-A nrPDB
Length = 177
Score = 32.8 bits (73), Expect = 0.31, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 66/168 (39%), Gaps = 13/168 (7%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRHLP 260
L+G + GK+ + R ++ +D ++ +++ + + DT G R
Sbjct: 16 LIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHT 75
Query: 261 HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKID 320
T R A ++ V D + + ENI ++E ++ +L+ NK D
Sbjct: 76 --------ITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 127
Query: 321 MLED-FEPRIDRDEENKPNRVWL---SAQTGAGIPQLFQALTERLSGE 364
M + P+ ++ + + + SA+ I + F L E + +
Sbjct: 128 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 175
>4DXA-A nrPDB
Length = 169
Score = 32.8 bits (73), Expect = 0.33, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 64/171 (37%), Gaps = 16/171 (9%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
+ ++G GKS L + + ++ D ++++V + DT G
Sbjct: 8 LVVLGSVGVGKSALTVQFVQ-GIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAG---- 62
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
A ++ Q L++ I A + + +L D ++P +LV NK
Sbjct: 63 -TEQFTAMRDLYMKN-GQGFALVYSITAQSTF-NDLQDLREQILRVKDTDDVPMILVGNK 119
Query: 319 IDMLEDFEPRIDRDEENKPNR------VWLSAQTGAGIPQLFQALTERLSG 363
D LED +N + + SA++ + ++F L +++
Sbjct: 120 CD-LEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINR 169
>2GF9-A nrPDB
Length = 189
Score = 32.8 bits (73), Expect = 0.34, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 9/124 (7%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRHLP 260
L+G ++ GK++ R + A +D ++ + D + + DT G R+
Sbjct: 27 LIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRT 86
Query: 261 HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKID 320
T R A L + D A+ ++ T ++ +LV NK D
Sbjct: 87 --------ITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCD 138
Query: 321 MLED 324
+ ++
Sbjct: 139 LEDE 142
>6QUZ-A nrPDB
Length = 587
Score = 32.4 bits (72), Expect = 0.34, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 14/76 (18%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVA--DVGETVLADTVGFIR 257
V+++G T +GKSTL N I +DP R++V DV L D G I
Sbjct: 372 VAVLGETGSGKSTLMNLIPRL-----------IDPERGRVEVDELDVRTVKLKDLRGHIS 420
Query: 258 HLPHDLVAAFKATLQE 273
+P + V F T++E
Sbjct: 421 AVPQETVL-FSGTIKE 435
>5TY0-A nrPDB
Length = 422
Score = 32.4 bits (72), Expect = 0.34, Method: Composition-based stats.
Identities = 17/115 (14%), Positives = 44/115 (38%), Gaps = 12/115 (10%)
Query: 243 DVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVL 302
+ + DT G + D + + +L+ + V D+ ++ TV
Sbjct: 81 ESHRINIIDTPGHV-----DFMIEVERSLRVL---DGAVVVFDSVAGVEPQS----ETVW 128
Query: 303 EEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQAL 357
+ + + +P ++ +NK+D + R+ + + + Q G + F+ +
Sbjct: 129 RQANKYGVPRIVFVNKMDRMGANFLRVVSQIKQRLGSTPVVLQLPIGAEEEFKGV 183
>1Z0A-A nrPDB
Length = 174
Score = 32.4 bits (72), Expect = 0.37, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 55/166 (33%), Gaps = 15/166 (9%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRHLP 260
++G T GKS L + T+ R L ++ R I + + + DT G
Sbjct: 15 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE---- 70
Query: 261 HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKID 320
+ T R A L V D ++ + + +L+ NK D
Sbjct: 71 ----SFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 126
Query: 321 MLEDFEPRIDRDEENKPNRVWL-----SAQTGAGIPQLFQALTERL 361
LE + E L SA+T + + + F + +
Sbjct: 127 -LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 171
>4M8N-E nrPDB
Length = 199
Score = 32.4 bits (72), Expect = 0.39, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 9/126 (7%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
+ ++G GKS L + + ++ D ++++V + DT G
Sbjct: 9 LVVLGSGGVGKSALTVQFVQ-GIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAG---- 63
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
A ++ Q L++ I A + + +L D ++P +LV NK
Sbjct: 64 -TEQFTAMRDLYMKN-GQGFALVYSITAQSTF-NDLQDLREQILRVKDTDDVPMILVGNK 120
Query: 319 IDMLED 324
D+ ++
Sbjct: 121 CDLEDE 126
>4YPN-A nrPDB
Length = 293
Score = 32.4 bits (72), Expect = 0.42, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 2/94 (2%)
Query: 171 IVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFA 230
+ ++ R+ R+ + ++ P + LVG GK++L I AR
Sbjct: 117 LKDVKERILEYLAVRQLTQGLDVRNKAPILVLVGPPGVGKTSLGRSI--ARSMNRKFHRI 174
Query: 231 TLDPTLRRIDVADVGETVLADTVGFIRHLPHDLV 264
+L ++ T + G + H +
Sbjct: 175 SLGGVRDEAEIRGHRRTYIGAMPGKLIHAMKQVG 208
>1ECX-A nrPDB
Length = 384
Score = 32.0 bits (71), Expect = 0.45, Method: Composition-based stats.
Identities = 22/155 (14%), Positives = 45/155 (29%), Gaps = 19/155 (12%)
Query: 137 VRGWTHLERQKGGIGLRGPGETQLETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKA- 195
+R H Q+ G+ + R + + ++ + +EK R + +
Sbjct: 221 IRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNLG 280
Query: 196 ---------DVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGE 246
+P V + N STL N ++ +Y + T D
Sbjct: 281 AHIITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVSTSSACTS---------KDERL 331
Query: 247 TVLADTVGFIRHLPHDLVAAFKATLQETRQATLLL 281
+ D +G R + + + L
Sbjct: 332 RHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFL 366
>2HF8-A nrPDB
Length = 226
Score = 32.0 bits (71), Expect = 0.46, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 287 ADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEEN------KPNRV 340
+ V E +T+ + + L+V+NKID+ + I + E + V
Sbjct: 142 KRIVVISTTEGDDTIEKHPGIMKTADLIVINKIDLADAVGADIKKMENDAKRINPDAEVV 201
Query: 341 WLSAQTGAGIPQLFQALTERLSGEVA 366
LS +T G ++ + + E+ EV
Sbjct: 202 LLSLKTMEGFDKVLEFI-EKSVKEVK 226
>5SZH-B nrPDB
Length = 203
Score = 32.0 bits (71), Expect = 0.47, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 59/170 (34%), Gaps = 15/170 (8%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFAT-LDPTLRRIDVADVG-ETVLADTVGFIRHL 259
L+G + GKS L R + Y + +D +R I++ + + DT G R
Sbjct: 15 LIGDSGVGKSCLLLRFADDT-YTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER-- 71
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKI 319
T R A ++ V D D N++ ++ + + LLV NK
Sbjct: 72 ------FRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 125
Query: 320 DM-LEDFEPRIDRDEENKPNRVWL---SAQTGAGIPQLFQALTERLSGEV 365
D+ + E + SA+ + Q F + + +
Sbjct: 126 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRM 175
>1QZX-A nrPDB
Length = 440
Score = 32.0 bits (71), Expect = 0.48, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 69/178 (38%), Gaps = 10/178 (5%)
Query: 239 IDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV 298
I V + + ++ DT G + + + + + ++ VIDA+ + ++ +
Sbjct: 181 IFVKNKMDIIIVDTAGRHGYGEETKLLEEMKEMYDVLKPDDVILVIDASIGQKAYDLASR 240
Query: 299 NTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALT 358
I + +++ K+D + ++ TG I +L
Sbjct: 241 FHQASPIGS------VIITKMDGTAKGGGALSAVVATGATIKFIG--TGEKIDELETFNA 292
Query: 359 ER-LSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEEDGSVSLQ-VRMPIVDWRRL 414
+R +S + + ++ + + ++Q ++ ME G ++L+ V I+ R++
Sbjct: 293 KRFVSRILGMGDIESILEKVKGLEEYDKIQKKMEDVMEGKGKLTLRDVYAQIIALRKM 350
>3VQT-A nrPDB
Length = 548
Score = 32.0 bits (71), Expect = 0.49, Method: Composition-based stats.
Identities = 39/234 (16%), Positives = 80/234 (34%), Gaps = 42/234 (17%)
Query: 199 TVSLVGYTNAGKSTLFNRI----------------------TEARVYAADQLFATLDPTL 236
T +++ + +AGK+TL ++ T + + ++ ++
Sbjct: 33 TFAIISHPDAGKTTLTEKLLLFGGAIQMAGSVKARKAARHATSDWMAMERERGISVTTSV 92
Query: 237 RRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIE 296
+ D L DT G + T + L VIDAA +
Sbjct: 93 MQFPYRD-RVVNLLDTPGHQDFS--------EDTYRVLTAVDSALVVIDAAKGVEAQT-- 141
Query: 297 AVNTVLEEIDAHEIPTLLVMNKID--MLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLF 354
+++ P + +NK+D L + D ++ + ++ G G F
Sbjct: 142 --RKLMDVCRMRATPVMTFVNKMDREALHPLDVMADIEQHLQIECAPMTWPIGMG--SSF 197
Query: 355 QALTERLSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEEDGSVSLQVRMPI 408
+ + L ++ L GR++S A + + E G + Q+RM +
Sbjct: 198 KGTYDLLHKQL---HLFSATHGGRIQSGIVIHGADDPQLDEYLGDQAEQLRMDL 248
>2A5J-A nrPDB
Length = 191
Score = 32.0 bits (71), Expect = 0.52, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 13/171 (7%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRHLP 260
++G T GKS L + T+ R L ++ R +++ + + DT G
Sbjct: 26 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQE---- 81
Query: 261 HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKID 320
+ T R A L V D ++ + + + + +L+ NK D
Sbjct: 82 ----SFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 137
Query: 321 MLEDFEPRIDRDEENKPNRVWL----SAQTGAGIPQLFQALTERLSGEVAQ 367
+ + + + E + SA+T + + F + + ++ Q
Sbjct: 138 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQ 188
>4Q7K-A nrPDB
Length = 250
Score = 32.0 bits (71), Expect = 0.54, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 13/67 (19%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVA--DVGETVLADTVGFIR 257
V+++G T +GKSTL N I +DP R++V DV L D G I
Sbjct: 34 VAVLGETGSGKSTLMNLIPRL-----------IDPERGRVEVDELDVRTVKLKDLRGHIS 82
Query: 258 HLPHDLV 264
+P + V
Sbjct: 83 AVPQETV 89
>1MOZ-A nrPDB
Length = 183
Score = 32.0 bits (71), Expect = 0.54, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 60/175 (34%), Gaps = 24/175 (13%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
+ ++G AGK+T+ R+ V T+ + + ++ V D G
Sbjct: 21 ILILGLDGAGKTTILYRLQIGEVVTTKP---TIGFNVETLSYKNLKLNVW-DLGG----- 71
Query: 260 PHDLVAAFKATLQETRQAT--LLLHVIDAADVRVQENI-EAVNTVLEEIDAHEIPTLLVM 316
A ++ V+D+ D + ++ +L+E + + L+
Sbjct: 72 -----QTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFA 126
Query: 317 NKID-----MLEDFEPRIDRDEENKP--NRVWLSAQTGAGIPQLFQALTERLSGE 364
NK D + ++ E + V SA G GI + L + + E
Sbjct: 127 NKQDQPGALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVIKEE 181
>5L3S-A nrPDB
Length = 298
Score = 32.0 bits (71), Expect = 0.56, Method: Composition-based stats.
Identities = 17/127 (13%), Positives = 44/127 (34%), Gaps = 8/127 (6%)
Query: 239 IDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV 298
I V + + ++ DT G + + + + + ++ VIDA+ + ++ +
Sbjct: 179 IFVKNKMDIIIVDTAGRHGYGEETKLLEEMKEMYDVLKPDDVILVIDASIGQKAYDLASR 238
Query: 299 NTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALT 358
I + +++ K+D + ++ TG I +L
Sbjct: 239 FHQASPIGS------VIITKMDGTAKGGGALSAVVATGATIKFIG--TGEKIDELETFNA 290
Query: 359 ERLSGEV 365
+R +
Sbjct: 291 KRFVSRI 297
>5W76-A nrPDB
Length = 385
Score = 31.6 bits (70), Expect = 0.66, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 48/139 (34%), Gaps = 30/139 (21%)
Query: 200 VSLVGYTNAGKSTLFNRITE----------------ARVYAADQLFATLDPTLRRIDVAD 243
+ +G+ + GK+TL IT+ + + T+ + +
Sbjct: 7 IGTIGHVDHGKTTLTAAITKVLAEKGQAEFKAYDQIDKAPEEKERGITISTAHVEYETEN 66
Query: 244 VGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLE 303
D G ++ + + A + + V+ AAD + + E +
Sbjct: 67 -RHYAHVDCPGHADYVKNMITGAAQM--------DGAILVVSAADGPMPQTREHILLA-- 115
Query: 304 EIDAHEIPTLLV-MNKIDM 321
+P ++V +NK+DM
Sbjct: 116 --RQVGVPYIVVFLNKVDM 132
>4FMC-F nrPDB
Length = 117
Score = 31.6 bits (70), Expect = 0.67, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 11/122 (9%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFAT-LDPTLRRIDVADVG-ETVLADTVGFIRHL 259
L+G + GKS L R + Y + +D +R I++ + + DT G R
Sbjct: 3 LIGDSGVGKSCLLLRFADDT-YTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER-- 59
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKI 319
T R A ++ V D D N++ ++ + + LLV NK
Sbjct: 60 ------FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 113
Query: 320 DM 321
D+
Sbjct: 114 DL 115
>3L0I-B nrPDB
Length = 199
Score = 31.6 bits (70), Expect = 0.67, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 11/122 (9%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFAT-LDPTLRRIDVADVG-ETVLADTVGFIRHL 259
L+G + GKS L R + Y + +D +R I++ + + DT G R
Sbjct: 38 LIGDSGVGKSCLLLRFADDT-YTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER-- 94
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKI 319
T R A ++ V D D N++ ++ + + LLV NK
Sbjct: 95 ------FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKC 148
Query: 320 DM 321
D+
Sbjct: 149 DL 150
>3TK1-A nrPDB
Length = 330
Score = 31.2 bits (69), Expect = 0.76, Method: Composition-based stats.
Identities = 43/247 (17%), Positives = 76/247 (30%), Gaps = 59/247 (23%)
Query: 163 DRRLLRNRIVQIQ-SRLERVEKQREQGRQSRIKADVPT-VSLVGYTNAGKSTLFNRIT-- 218
DR L I ++ +R + E+ +E + A V + G GKST +
Sbjct: 20 DRAALPRAITLVESTRADHRERAQELLLELMPDAGRAMHVGITGVPGVGKSTSIEALGMH 79
Query: 219 ------EARVYAADQ---------------------------LFATLDPTLRRIDVADVG 245
V A D + TL + A
Sbjct: 80 LIEQGHRVAVLAVDPSSVRSGGSILGDKTRMARLAVHPDAYVRPSPSSGTLGGVAKATRE 139
Query: 246 ETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEI 305
VL + GF LV E A ++ + R + ++ + + E+
Sbjct: 140 TIVLLEAAGF----DVVLVETVGVGQSEVTVADMVDTFVFLTLARTGDQLQGIKKGVLEL 195
Query: 306 DAHEIPTLLVMNKIDMLEDFEPRIDRDEEN-------------KPNRVWLSAQTGAGIPQ 352
++V+NK D E R E +P + +SA G G+ +
Sbjct: 196 AD-----IVVVNKADGEHAVEARKAARELAGAMRLIYPRETLWRPPVLTMSALEGTGVAE 250
Query: 353 LFQALTE 359
L++ + +
Sbjct: 251 LWETVLK 257
>5WDR-A nrPDB
Length = 171
Score = 31.2 bits (69), Expect = 0.83, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 57/160 (35%), Gaps = 15/160 (9%)
Query: 210 KSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETV-LADTVGFIRHLPHDLVAAFK 268
KS L ++ + + + D + + + D + + DT G D A
Sbjct: 20 KSALTIQLIQQH-FVTEYDPTIEDSYRKHVSIDDEACLLDILDTAG-----QEDYSAMRD 73
Query: 269 ATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPR 328
++ T + L ++ ID + + E +L D E+P +LV NK D LE+
Sbjct: 74 QYMR-TGEGFLCVYSID-SQQSLDEIHSFREQILRVKDQDEVPMILVGNKCD-LEEHREV 130
Query: 329 IDRDEENKPNRVWL-----SAQTGAGIPQLFQALTERLSG 363
+ + SA+ + + F L +
Sbjct: 131 STEAGQAVAKSYSIPFMETSAKKRINVEEAFYQLVREIRK 170
>1J8M-F nrPDB
Length = 297
Score = 31.2 bits (69), Expect = 0.86, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 43/128 (33%), Gaps = 8/128 (6%)
Query: 241 VADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNT 300
+++ E ++ DT G + + + E + + VIDA+ + ++ +
Sbjct: 177 LSEKMEIIIVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDASIGQKAYDLASKFN 236
Query: 301 VLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTER 360
+I +++ K+D + ++ TG I +L R
Sbjct: 237 QASKIGT------IIITKMDGTAKGGGALSAVAATGATIKFIG--TGEKIDELEVFNPRR 288
Query: 361 LSGEVAQH 368
+ H
Sbjct: 289 FVARLHHH 296
>3MD0-A nrPDB
Length = 355
Score = 31.2 bits (69), Expect = 0.97, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 66/201 (32%), Gaps = 43/201 (21%)
Query: 200 VSLVGYTNAGKSTLFNRIT--------EARVYAADQLFA----------TLDPTLRRIDV 241
V + G GKST + V A D T L
Sbjct: 82 VGITGVPGVGKSTAIEALGMHLIERGHRVAVLAVDPSSTRTGGSILGDKTRMARLAVHPN 141
Query: 242 ADVGETVLADTVGFIRHLPHDLV-----AAFKATLQET----RQATLLLHVIDAADVRV- 291
A + + + T+G + + V A F L ET + + +++D +
Sbjct: 142 AYIRPSPTSGTLGGVTRATRETVVLLEAAGFDVILIETVGVGQSEVAVANMVDTFVLLTL 201
Query: 292 QENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEEN-------------KPN 338
+ + + + E+ ++V+NK D E R+ E + +P
Sbjct: 202 ARTGDQLQGIKK--GVLELADIVVVNKADGEHHKEARLAARELSAAIRLIYPREALWRPP 259
Query: 339 RVWLSAQTGAGIPQLFQALTE 359
+ +SA G G+ +L+ +
Sbjct: 260 VLTMSAVEGRGLAELWDTVER 280
>6N0I-A nrPDB
Length = 706
Score = 31.2 bits (69), Expect = 0.98, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 58/176 (32%), Gaps = 39/176 (22%)
Query: 200 VSLVGYTNAGKSTLFNRI---TEARVYAADQL--FATLD----PTLRRIDVADVG----- 245
+ +V + +AGK+T RI T + AT+D R I +
Sbjct: 16 IGIVAHVDAGKTTTTERILFYTGVNHKMGEVHDGAATMDWMAQEQERGITITSAATTAFW 75
Query: 246 -----------ETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQEN 294
+ DT G + D + +L+ A ++ D + +
Sbjct: 76 QGSTKQFAHKYRFNIIDTPGHV-----DFTIEVERSLRVLDGAVVVFSGADGVEPQ---- 126
Query: 295 IEAVNTVLEEIDAHEIPTLLVMNKID--MLEDFEPRIDRDEENKPNRVWLSAQTGA 348
TV + + + +P L +NK+D + D+ + V + G+
Sbjct: 127 ---SETVWRQANKYHVPRLAYINKMDRQGADFLRVVKQIDQRLGHHPVPIQLAIGS 179
>2QAG-A nrPDB
Length = 361
Score = 30.8 bits (68), Expect = 1.0, Method: Composition-based stats.
Identities = 41/259 (15%), Positives = 88/259 (33%), Gaps = 34/259 (13%)
Query: 182 EKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRI-------TEARVYAADQLFATLDP 234
+ R+S K T+ +VG + GKSTL N + AA+++ T+
Sbjct: 22 NLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQI 81
Query: 235 TLRRIDVADVG---ETVLADTVG-------------FIRHLPHDLV--AAFKATLQETRQ 276
+++ + G + DT G I ++ ++ L
Sbjct: 82 EASTVEIEERGVKLRLTVVDTPGYGDAINCRDCFKTIISYIDEQFERYLHDESGLNRRHI 141
Query: 277 ATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDML-----EDFEPRIDR 331
+H ++ ++ + +++ + V+ K D L E + RI
Sbjct: 142 IDNRVHCCFYFISPFGHGLKPLDVAFMKAIHNKVNIVPVIAKADTLTLKERERLKKRILD 201
Query: 332 DEENKPNRVWLSAQTGAGIPQLFQALTERLSG----EVAQHTLRLPPQEGRLRSRFYQLQ 387
+ E +++ + + F+ T L V + + ++R R Y
Sbjct: 202 EIEEHNIKIYHLPDAESDEDEDFKEQTRLLKASIPFSVVGSNQLIEAKGKKVRGRLYPWG 261
Query: 388 AIEKEWMEEDGSVSLQVRM 406
+E E E + + L+ +
Sbjct: 262 VVEVENPEHNDFLKLRTML 280
>2B7C-A nrPDB
Length = 458
Score = 30.8 bits (68), Expect = 1.0, Method: Composition-based stats.
Identities = 23/166 (13%), Positives = 52/166 (31%), Gaps = 23/166 (13%)
Query: 209 GKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFK 268
GK + ++ A + T+D L + + + + D G + + +
Sbjct: 50 GKGSFKYAWVLDKLKAERERGITIDIALWKFETPKY-QVTVIDAPGHRDFIKNMITG--- 105
Query: 269 ATLQETRQATLLLHVIDA----ADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLED 324
T QA + +I + + ++ + L ++ +NK+D ++
Sbjct: 106 -----TSQADCAILIIAGGVGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDSVKW 160
Query: 325 FEPRIDRDEEN----------KPNRVWLSAQTGAGIPQLFQALTER 360
E R + P V +G + +A T
Sbjct: 161 DESRFQEIVKETSNFIKKVGYNPKTVPFVPISGWNGDNMIEATTNA 206
>1D5C-A nrPDB
Length = 162
Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 58/169 (34%), Gaps = 17/169 (10%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTL-RRIDVADVGETVLADTVGFIRH 258
+ +G GK+++ R ++ T D I + + +T+ D
Sbjct: 4 LVFLGEQAVGKTSIITR----------FMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQ 53
Query: 259 LPHDLVAAFKATL--QETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVM 316
L +L R + + V D + + EN + ++ LV
Sbjct: 54 LWDTAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVG 113
Query: 317 NKIDMLE----DFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERL 361
NK D+ + +E + + +E SA+ G I LF+ +L
Sbjct: 114 NKTDLGDLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKTASKL 162
>1RYH-A nrPDB
Length = 203
Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 54/184 (29%), Gaps = 16/184 (8%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIR- 257
+VG GK+ L T + + + D + V L DT G
Sbjct: 8 CVVVGDGAVGKTCLLISYT-TNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDY 66
Query: 258 ------HLPHDLVAAFKATLQETRQ----ATLLLHVIDAADVRVQENIEAVNTVLEEIDA 307
P + + + + A + L EN+ A
Sbjct: 67 DRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEVRHHC 126
Query: 308 HEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQ 367
P +LV K+D+ +D + E+ ++ G + + A+ + Q
Sbjct: 127 PNTPIILVGTKLDLRDDKDTIEKLKEKK---LTPITYPQGLAMAKEIGAVKYLECSALTQ 183
Query: 368 HTLR 371
L+
Sbjct: 184 RGLK 187
>5AR1-A nrPDB
Length = 303
Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 56/165 (33%), Gaps = 31/165 (18%)
Query: 199 TVSLVGYTNAGKSTLFNRI-------TEARVYAADQLFATLDPTLR--RIDVADVG---- 245
TV +VG + +G+ST N + T + +D LR +++ D
Sbjct: 29 TVMIVGQSGSGRSTFINTLCGQQVVDTSTTILLPTDTSTEIDLQLREETVELEDDEGVKI 88
Query: 246 ETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQEN----------- 294
+ + DT GF L + + + +LL ++
Sbjct: 89 QLNIIDTPGFGDSLDNSPSFEIISDYIRHQYDEILLEESRVRRNPRFKDGRVHCCLYLIN 148
Query: 295 ------IEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDE 333
E + ++ + + + V++K D L E ++++
Sbjct: 149 PTGHGLKEIDVEFIRQLGSL-VNIIPVISKSDSLTRDELKLNKKL 192
>1FNN-A nrPDB
Length = 389
Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 53/145 (36%), Gaps = 9/145 (6%)
Query: 198 PTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETV-LADTVGFI 256
P +L+G GK+ ++ E F ++ + R A +GE +
Sbjct: 45 PRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAIIGEIARSLNIPFPR 104
Query: 257 RHLPHDLVAAFKATL-QETRQATLLLH-VIDAADVRVQENIEAVNTVLEE---IDAHEIP 311
R L D F A L + R+ L + V+D A + + + +E + A I
Sbjct: 105 RGLSRD---EFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGAFRIA 161
Query: 312 TLLVMNKIDMLEDFEPRIDRDEENK 336
++V + +L + +P
Sbjct: 162 LVIVGHNDAVLNNLDPSTRGIMGKY 186
>1YR7-A nrPDB
Length = 262
Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Query: 239 IDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV 298
+ + + VL DT G + L F L E L++++ D ++ + V
Sbjct: 103 LRLEKENDYVLIDTPGQMETF---LFHEFGVRLMENLPYPLVVYISDPEILKKPNDYCFV 159
Query: 299 NTVLEEIDAH-EIPTLLVMNKIDMLEDFEPRIDRDE 333
ID T+ +NK+D+L + E R
Sbjct: 160 RFFALLIDLRLGATTIPALNKVDLLSEEEKERHRKY 195
>5JBH-O nrPDB
Length = 148
Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 12/103 (11%)
Query: 287 ADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQT 346
A E ++ + +L + AH IP V +D E + ++A+
Sbjct: 51 AGYLTDEQVKKIEEILADPVAHGIPRWAV------------NRPKDYETGRDLHLITAKL 98
Query: 347 GAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQLQAI 389
I + L + +H L LP + R RS F + Q +
Sbjct: 99 DMAIREDIMRLRRIRAYRGIRHELGLPVRGQRTRSNFRRGQTV 141
>6N8P-A nrPDB
Length = 979
Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 53/141 (37%), Gaps = 15/141 (10%)
Query: 246 ETVLADTVGFIRHLPHDLVAAFKATLQETRQATLL-LHVIDAADVRVQENIEAVNTVLEE 304
R + + A +Q +A ++ + V+D V + E +E + + +
Sbjct: 732 YAFSLRVPPAERRMDEPVRAEQAKEIQLMHRAPVVGILVLDGHSVPLPEPLEVAHDLSKS 791
Query: 305 IDAHEIPTLLVMN----KIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQA-LTE 359
D LLV++ K+ L ++ + L+A G+ + ++ A
Sbjct: 792 PDMQGSHQLLVVSEEQFKVFTLPKVSAKLK---------LKLTALEGSRVRRVSVAHFGS 842
Query: 360 RLSGEVAQHTLRLPPQEGRLR 380
R + + +H L + G ++
Sbjct: 843 RRAEDYGEHHLAVLTNLGDIQ 863
>6CS8-A nrPDB
Length = 303
Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 71/219 (32%), Gaps = 24/219 (10%)
Query: 156 GETQLETDRRLLRNRIVQIQSRLERVEKQ-----REQGRQSRIKADVP---------TVS 201
+ +ET R+++ N + R + +E+ + K D P +
Sbjct: 44 ADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEPLNVEGKAPFVIL 103
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRHLP 260
+VG GK+T ++ + T R V + + +H
Sbjct: 104 MVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTG 163
Query: 261 HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKID 320
D + +Q + + + + D ++ + ++EE+ + VM K+D
Sbjct: 164 ADSASVIFDAIQAAKARNIDVLIAD-----TAGRLQNKSHLMEELKK----IVRVMKKLD 214
Query: 321 MLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTE 359
+ E + D N V + + LT+
Sbjct: 215 VEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTK 253
>5IZL-A nrPDB
Length = 616
Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats.
Identities = 36/212 (16%), Positives = 78/212 (36%), Gaps = 56/212 (26%)
Query: 200 VSLVGYTNAGKSTLFNRI-TEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIR- 257
V ++G+ ++GK+ L + T A A D+ + + R I + +R
Sbjct: 30 VGVLGHIDSGKTALARALSTTASTAAFDKQPQSRE---RGITLDLGFSCFSVPLPARLRS 86
Query: 258 HLPH------------------------DLVAAFKATLQETRQATLLLHVIDAADVRVQE 293
LP + + + + L++ VID +
Sbjct: 87 SLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQ 146
Query: 294 NIEAVNTVLEEIDAHEIPTLLVMNKIDML-------------EDFEPRIDRDEENKPNRV 340
+ E + V+ +I ++ ++V+NKID+L + + ++ + +
Sbjct: 147 SAECL--VIGQIACQKL--VVVLNKIDLLPEGKRQAAIDKMTKKMQKTLENTKFRGAPII 202
Query: 341 WLSAQTG----------AGIPQLFQALTERLS 362
++A+ G GIP+L + LT ++S
Sbjct: 203 PVAAKPGGPEAPETEAPQGIPELIELLTSQIS 234
>2P8Y-T nrPDB
Length = 842
Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 56/177 (31%), Gaps = 44/177 (24%)
Query: 196 DVPTVSLVGYTNAGKSTLFNRI-------TEARVYAADQLFATLDPTLRRIDVA------ 242
+V +S++ + + GKSTL + + + A+ A D R I +
Sbjct: 18 NVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISL 77
Query: 243 ----------------DVGETV--LADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVI 284
D + L D+ G + R L V+
Sbjct: 78 YSEMSDEDVKEIKQKTDGNSFLINLIDSPGHVDFSSE--------VTAALRVTDGALVVV 129
Query: 285 DAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKID-MLEDFEPRIDRDEENKPNRV 340
D + + TVL + I ++V+NK+D L + + + + V
Sbjct: 130 DTIEGVCVQT----ETVLRQALGERIKPVVVINKVDRALLELQVSKEDLYQTFARTV 182
>2X77-A nrPDB
Length = 189
Score = 30.5 bits (67), Expect = 1.3, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 60/170 (35%), Gaps = 20/170 (11%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
V ++G NAGK+++ R+ + T+ L + ++ + D G +
Sbjct: 25 VLMLGLDNAGKTSILYRL---HLGDVVTTVPTVGVNLETLQYKNI-SFEVWDLGG-QTGV 79
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLV-MNK 318
F T +++V+D+ D + L + D LL+ NK
Sbjct: 80 RPYWRCYFSDT-------DAVIYVVDSTDRDRMGVAKHELYALLDEDELRKSLLLIFANK 132
Query: 319 IDMLEDFEPR-------IDRDEENKPNRVWLSAQTGAGIPQLFQALTERL 361
D+ + + V S++TG G+ + L ERL
Sbjct: 133 QDLPDAASEAEIAEQLGVSSIMNRTWTIVKSSSKTGDGLVEGMDWLVERL 182
>4F4J-A nrPDB
Length = 202
Score = 30.5 bits (67), Expect = 1.4, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQ--LFATLDPTLRRIDVADVGETVLAD 251
+ + G + GKSTL ++ + T P ++ D V D
Sbjct: 20 IVISGPSGTGKSTLLKKLFAEYPDSFGFSVPSTTRTPRAGEVNGKDYN-FVSVD 72
>5EUM-A nrPDB
Length = 258
Score = 30.5 bits (67), Expect = 1.5, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 185 REQGRQSRIKADVP---TVSLVGYTNAGKSTLFNRITE 219
+E+ + I VP TV+LVG + +GKST+ N +T
Sbjct: 30 KEELALNNISFSVPAGKTVALVGRSGSGKSTIANLVTR 67
>5C1S-A nrPDB
Length = 391
Score = 30.5 bits (67), Expect = 1.5, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 42/122 (34%), Gaps = 11/122 (9%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
+ +VG N GK+T + D ++ R ++ + ++ GF L
Sbjct: 225 MLMVGDQNVGKTTFIRKFALQDPTGHDF----MNAITTRFEMEKIKYEIIMIDWGFYNKL 280
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKI 319
+ +R +L V D + +NI L ++ ++V K
Sbjct: 281 -------LQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDVAGVIVGYKT 333
Query: 320 DM 321
D+
Sbjct: 334 DL 335
>3FTQ-A nrPDB
Length = 274
Score = 30.5 bits (67), Expect = 1.6, Method: Composition-based stats.
Identities = 38/242 (15%), Positives = 83/242 (34%), Gaps = 34/242 (14%)
Query: 199 TVSLVGYTNAGKSTLFNRI-------TEARVYAADQLFATLDPTLRRIDVADVG---ETV 248
T+ +VG + GKSTL N + AA+++ T+ +++ + G
Sbjct: 7 TLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKLRLT 66
Query: 249 LADTVG-------------FIRHLPHDLV--AAFKATLQETRQATLLLHVIDAADVRVQE 293
+ DT G I ++ ++ L +H
Sbjct: 67 VVDTPGYGDAINCRDCFKTIISYIDEQFERYLHDESGLNRRHIIDNRVHCCFYFISPFGH 126
Query: 294 NIEAVNTVLEEIDAHEIPTLLVMNKIDML-----EDFEPRIDRDEENKPNRVWLSAQTGA 348
++ ++ + +++ + V+ K D L E + RI + E +++ +
Sbjct: 127 GLKPLDVAFMKAIHNKVNIVPVIAKADTLTLKERERLKKRILDEIEEHSIKIYHLPDAES 186
Query: 349 GIPQLFQALTERLSG----EVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEEDGSVSLQV 404
+ F+ T L V + + ++R R Y +E E E + + L+
Sbjct: 187 DEDEDFKEQTRLLKASIPFSVVGSNQLIEAKGKKVRGRLYPWGVVEVENPEHNDFLKLRT 246
Query: 405 RM 406
+
Sbjct: 247 ML 248
>2YV5-A nrPDB
Length = 302
Score = 30.5 bits (67), Expect = 1.6, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 29/83 (34%), Gaps = 3/83 (3%)
Query: 176 SRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEA---RVYAADQLFATL 232
L+ K E + + L G + GKS++ +R+T +++
Sbjct: 144 DVLKVSAKTGEGIDELVDYLEGFICILAGPSGVGKSSILSRLTGEELRTQEVSEKTERGR 203
Query: 233 DPTLRRIDVADVGETVLADTVGF 255
T + + + DT GF
Sbjct: 204 HTTTGVRLIPFGKGSFVGDTPGF 226
>4XGC-D nrPDB
Length = 459
Score = 30.5 bits (67), Expect = 1.7, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 70/191 (36%), Gaps = 17/191 (8%)
Query: 159 QLETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKA----DVPTVSLVGYTNAGKSTLF 214
+L + RR L+ R+ + + L K+R R + + ++ L+G +GK+TL
Sbjct: 7 ELVSIRRFLKERLQRDYTTLRGYAKERSNVRLLLQRTAEMGESNSLLLLGPRGSGKTTLI 66
Query: 215 NRITEARVYAADQLFATLDPTL-RRIDVADVGETVLADTVGFIRHLPHDLV-AAFKATLQ 272
N + + TL L + D + + V +F L
Sbjct: 67 NSVLADLLPNKSFGENTLIVHLDGNLHTDDRVALKSITVQMQLENAADGKVFGSFAENLA 126
Query: 273 ET--------RQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMN---KIDM 321
+ + ++ +++ D+ + + + L ++ + V+ ++D+
Sbjct: 127 FLLQCLKAGGKHSKSVIFILEEFDLFCAHHNQTLLYNLFDVSQSAQAPICVLGVTCRLDV 186
Query: 322 LEDFEPRIDRD 332
+E E R+
Sbjct: 187 IELLEKRVKSR 197
>1T9H-A nrPDB
Length = 307
Score = 30.1 bits (66), Expect = 1.7, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 3/71 (4%)
Query: 199 TVSLVGYTNAGKSTLFNRIT---EARVYAADQLFATLDPTLRRIDVADVGETVLADTVGF 255
T G + GKS+L N I+ R + T R +++ ++ADT GF
Sbjct: 175 TTVFAGQSGVGKSSLLNAISPELGLRTNEISEHLGRGKHTTRHVELIHTSGGLVADTPGF 234
Query: 256 IRHLPHDLVAA 266
D+
Sbjct: 235 SSLEFTDIEEE 245
>5OWV-A nrPDB
Length = 732
Score = 30.1 bits (66), Expect = 1.8, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 179 ERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRR 238
E ++ + ++ + + +++ G NAGKS+L N + + + T + T+
Sbjct: 145 ENLKSRLQKTLEKFQNLEF-NIAITGVMNAGKSSLLNALLKEDFLGVSNIPETANLTVLS 203
Query: 239 IDVADVGETVLAD 251
++ + D
Sbjct: 204 YGKSEEAKIYFWD 216
>3B5X-A nrPDB
Length = 582
Score = 30.1 bits (66), Expect = 1.8, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 156 GETQLETDR---RLLRNRIV-QIQ-SRLERVEKQREQGRQSRIKADVP---TVSLVGYTN 207
G LET+R + R+ ++ + + +E+ S + +P TV+LVG +
Sbjct: 320 GLMDLETERDNGKYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSG 379
Query: 208 AGKSTLFNRITE 219
+GKST+ N T
Sbjct: 380 SGKSTIANLFTR 391
>3OET-A nrPDB
Length = 381
Score = 30.1 bits (66), Expect = 1.9, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 69/198 (34%), Gaps = 30/198 (15%)
Query: 199 TVSLVGYTNAGKSTLFNRI--TEARVYAADQL---------FATLDPTLRRIDVADVGET 247
T+ +VG N G S L R+ R D F TLD ++ +
Sbjct: 121 TIGIVGVGNVG-SRLQTRLEALGIRTLLCDPPRAARGDEGDFRTLD------ELVQEADV 173
Query: 248 VLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDA 307
+ T + P+ + TL + +L I+A V +N + +
Sbjct: 174 LTFHTP-LYKDGPYKTLHLADETLIRRLKPGAIL--INACRGPVVDNAALLARL-----N 225
Query: 308 HEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGA--GIPQLFQALTERLSGE- 364
P +V++ + D + + + + G G Q+F+A + + E
Sbjct: 226 AGQPLSVVLDVWEGEPDLNVALLEAVDIGTSHIAGYTLEGKARGTTQVFEAYSAFIGREQ 285
Query: 365 -VAQHTLRLPPQEGRLRS 381
VA TL P+ GR+
Sbjct: 286 RVALETLLPAPEFGRITL 303
>6G79-A nrPDB
Length = 225
Score = 29.7 bits (65), Expect = 2.2, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 35/159 (22%)
Query: 179 ERVEKQREQGRQSRIKADVPTVS------LVGYTNAGKSTLFNRIT---------EARVY 223
ER +R + + +K D + + L+G N+GKST+ ++
Sbjct: 6 ERAALERSKAIEKNLKEDGISAAKDVKLLLLGADNSGKSTIVKQMKIIHGGSGGSGGTTG 65
Query: 224 AADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHV 283
+ F + R DV K + T ++
Sbjct: 66 IVETHFTFKNLHFRLFDVGGQRS-------------------ERKKWIHCFEDVTAIIFC 106
Query: 284 IDAAD-VRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDM 321
+D +D R+ E++ +++ + +L +NK D+
Sbjct: 107 VDLSDYNRMHESLMLFDSICNNKFFIDTSIILFLNKKDL 145
>6FGZ-A nrPDB
Length = 774
Score = 29.7 bits (65), Expect = 2.3, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 170 RIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLF 229
R++ I ++L+ + E G S I D+P + +VG ++GKS++ + ++
Sbjct: 3 RLIPIVNKLQDL--FAETGLDSPI--DLPQIMVVGAQSSGKSSVLENVVGESIFPRGTGI 58
Query: 230 ATLDPT 235
T P
Sbjct: 59 VTRRPI 64
>4LV5-B nrPDB
Length = 423
Score = 29.7 bits (65), Expect = 2.3, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 43/132 (32%), Gaps = 14/132 (10%)
Query: 193 IKADVPTVSLVGYTNAGKSTLFNRITEARVY---AADQLFATLDPTLRRIDVADVGETVL 249
I + V V++ G T +GKS+ N + AA + ++ V
Sbjct: 75 IDSSVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVF 134
Query: 250 ADTVGF-IRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAH 308
D G + P + + +I +A + +I+ + + I
Sbjct: 135 WDLPGIGSTNFPPNTYLEKMKF----YEYD--FFIIISATRFKKNDID----IAKAISMM 184
Query: 309 EIPTLLVMNKID 320
+ V K+D
Sbjct: 185 KKEFYFVRTKVD 196
>4OI0-A nrPDB
Length = 431
Score = 29.7 bits (65), Expect = 2.3, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 8/109 (7%)
Query: 158 TQLETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRI 217
E+ ++ I + +K+ EQ + KA P + LVG T+ GK+T+ +
Sbjct: 80 YVAESTPMVIYLNIHAAMEEVR--KKREEQAAGNSNKAKGPRLLLVGPTDVGKTTVSRIL 137
Query: 218 TEARVYA-ADQLFATLDPTLRRIDVADVGETVLAD-----TVGFIRHLP 260
V +F LD + V VL GF R+ P
Sbjct: 138 CNYSVRQGRTPIFVELDVGQNSVSVPGTVAAVLVQKTADVIDGFERNQP 186
>5T3O-A nrPDB
Length = 307
Score = 29.7 bits (65), Expect = 2.4, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 43/123 (34%), Gaps = 5/123 (4%)
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
+ D +A+ R L + RV + V ++ E++ L+V ++
Sbjct: 165 VAPDAGDLKRASALARRLGLPLAFI---DKERVSDTEVRVRMLVGEVE--GKTALIVDDE 219
Query: 319 IDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGR 378
I ++ + V+ +A G + + + EVA P + +
Sbjct: 220 ISTAGSLVEAVEALMQAGAKEVYAAATHGVYVGPALDRIAKSPVKEVAATDTCPPKEGPK 279
Query: 379 LRS 381
LR+
Sbjct: 280 LRT 282
>3PIR-A nrPDB
Length = 183
Score = 29.7 bits (65), Expect = 2.4, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 39/104 (37%), Gaps = 10/104 (9%)
Query: 221 RVYAADQLFATLDPTLRRIDVADVGETV-LADTVGFIRHLPHDLVAAFKATLQETRQATL 279
+++ + D L+ ++ + + + DT G Q R
Sbjct: 41 KIFVPEYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMRE--------QYMRTGDG 92
Query: 280 LLHVIDAADVRVQENIEAVNTVLEEIDAHE-IPTLLVMNKIDML 322
L V D E+++ + ++ + E P +LV NK+D++
Sbjct: 93 FLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLM 136
>3MMP-A nrPDB
Length = 678
Score = 29.7 bits (65), Expect = 2.4, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 52/148 (35%), Gaps = 19/148 (12%)
Query: 184 QREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVAD 243
+E+ +++ +V T+ V + GK+TL IT V A A +
Sbjct: 286 SKEKFERTKPHVNVGTIGHVDH---GKTTLTAAIT--TVLAKTYGGAARAFDQIDNAPEE 340
Query: 244 VGETVLADTVGFIRHLP---------HDLVAAFKATLQETRQATLLLHVIDAADVRVQEN 294
+ +T P K + Q + V+ A D + +
Sbjct: 341 KARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQT 400
Query: 295 IEAVNTVLEEIDAHEIPTLLV-MNKIDM 321
E + + ++ +P ++V +NK DM
Sbjct: 401 REHIL-LGRQV---GVPYIIVFLNKCDM 424
>3M6A-A nrPDB
Length = 543
Score = 29.7 bits (65), Expect = 2.5, Method: Composition-based stats.
Identities = 40/266 (15%), Positives = 86/266 (32%), Gaps = 36/266 (13%)
Query: 161 ETDRRL-LRNRIVQIQSRLERVEKQREQGRQSR------IKADVPTVSLVGYTNAGKSTL 213
ETD +L L+ + +EK +E+ + P + L G GK++L
Sbjct: 65 ETDDKLDLKEAGRLLDEEHHGLEKVKERILEYLAVQKLTKSLKGPILCLAGPPGVGKTSL 124
Query: 214 FNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVG-FIRHLPHDLVAAFKATLQ 272
I A+ + +L ++ T + G I+ + L
Sbjct: 125 AKSI--AKSLGRKFVRISLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGKLNPVFLLD 182
Query: 273 ETRQ---------ATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLE 323
E + ++ +L V+D + + + E D ++ + N
Sbjct: 183 EIDKMSSDFRGDPSSAMLEVLDPEQNSSFSD----HYIEETFDLSKVLFIATAN------ 232
Query: 324 DFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRF 383
+ ++ I +L L ++ +H L ++ L+ R
Sbjct: 233 ---NLATIPGPLRDRMEIINIAGYTEIEKLEIVKDHLLPKQIKEHGL----KKSNLQLRD 285
Query: 384 YQLQAIEKEWMEEDGSVSLQVRMPIV 409
+ I + + E G SL+ ++ +
Sbjct: 286 QAILDIIRYYTREAGVRSLERQLAAI 311
>3CON-A nrPDB
Length = 190
Score = 29.7 bits (65), Expect = 2.5, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 13/143 (9%)
Query: 224 AADQLFATLDPTLRRIDVADVGETV-LADTVGFIRHLPHDLVAAFKATLQETRQATLLLH 282
+ D +++ + + + DT G + Q R L
Sbjct: 47 VDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRD--------QYMRTGEGFLC 98
Query: 283 VIDAADVRVQENIEAVNTVLEEIDAHE-IPTLLVMNKIDMLEDFEPRIDRDEENKPNRVW 341
V + + +I ++ + + +P +LV NK D+ E K +
Sbjct: 99 VFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPTRTVDTKQAHELAKSYGIP 158
Query: 342 L---SAQTGAGIPQLFQALTERL 361
SA+T G+ F L +
Sbjct: 159 FIETSAKTRQGVEDAFYTLVREI 181
>4KV9-A nrPDB
Length = 412
Score = 29.7 bits (65), Expect = 2.6, Method: Composition-based stats.
Identities = 30/220 (13%), Positives = 77/220 (35%), Gaps = 27/220 (12%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRI-----DVADVGETVLADTVG 254
+ VG T GKSTL + + + DP L+ + + + + +T G
Sbjct: 44 ILCVGETGIGKSTLLETLFNQKFDFSPSTHDLTDPKLKAVTYDLKEANVKLKLTVVETCG 103
Query: 255 -------------FIRHLPHDLVAAFKATLQETRQA----TLLLHVIDAADVRVQENIEA 297
+ ++ + + L+ R +HV ++++
Sbjct: 104 YGDQINKENNIKPVVDYIDNQFENYLQEELKMKRSMQAFHDTRVHVCLYFIAPTGHSLKS 163
Query: 298 VNTVLEEIDAHEIPTLLVMNKIDM-----LEDFEPRIDRDEENKPNRVWLSAQTGAGIPQ 352
++ V + +++ + V+ K D L+ F+ RI + ++ ++ + +
Sbjct: 164 IDLVAMKKLENKVNVIPVIAKSDTITKSELQKFKARILSEIQSNEIGIYQFPTDDEAVSE 223
Query: 353 LFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKE 392
+ + + V + + +R R Y +++ E
Sbjct: 224 TNSVMNQHIPFAVVGSSEEVKINGKTVRVRQYPWGSVQVE 263
>5UHV-A nrPDB
Length = 166
Score = 29.7 bits (65), Expect = 2.6, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 13/143 (9%)
Query: 224 AADQLFATLDPTLRRIDVADVGETV-LADTVGFIRHLPHDLVAAFKATLQETRQATLLLH 282
+ D +++ + + + DT G + Q R L
Sbjct: 29 VDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRD--------QYMRTGEGFLC 80
Query: 283 VIDAADVRVQENIEAVNTVLEEIDAHE-IPTLLVMNKIDMLEDFEPRIDRDEENKPNRVW 341
V + + +I ++ + + +P +LV NK D+ E K +
Sbjct: 81 VFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPTRTVDTKQAHELAKSYGIP 140
Query: 342 L---SAQTGAGIPQLFQALTERL 361
SA+T G+ F L +
Sbjct: 141 FIETSAKTRQGVEDAFYTLVREI 163
>5ZLU-EE nrPDB
Length = 497
Score = 29.7 bits (65), Expect = 2.9, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 69/185 (37%), Gaps = 16/185 (8%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQL-----FATLDPTLRRIDVADVGETVLADTVG 254
+ LVG AGKS+L + V A L FA + L I++ V + + +G
Sbjct: 33 IGLVGDNGAGKSSLLKVLNGEIVLAEATLQRFGDFAHIS-QLGGIEIETVEDRAMLSRLG 91
Query: 255 F--IRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPT 312
+++ +A + + H I A + ++ ++ ++ ++ A +
Sbjct: 92 VSNVQNDTMSGGEETRAKIAAAFSQQV--HGILADEPTSHLDLNGIDLLIGQLKAFDGAL 149
Query: 313 LLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRL 372
L++ + L+ +I ++ K W G + E + ++ L +
Sbjct: 150 LVISHDRYFLDMVVDKIWELKDGKITEYW------GGYSDYLRQKEEERQHQAVEYELMM 203
Query: 373 PPQEG 377
+E
Sbjct: 204 KERER 208
>5GKO-A nrPDB
Length = 671
Score = 29.3 bits (64), Expect = 3.1, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
Query: 175 QSRLERVEKQREQGRQSRIKADVPT-----VSLVGYTNAGKSTLFNRIT 218
S L R E Q D+ V++VG + +GKSTL N +
Sbjct: 16 VSNLVREFPAGESTIQILKGIDLTIYEGELVAIVGQSGSGKSTLMNILG 64
>4Z54-A nrPDB
Length = 287
Score = 29.3 bits (64), Expect = 3.1, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 13/85 (15%)
Query: 181 VEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVY-------AADQLFATLD 233
+E+ R++ ++ ++ V G GKSTL N + +++V +++ T++
Sbjct: 6 IEQMRKKTMKTGFDFNIMVVGQSGL---GKSTLVNTLFKSQVSRKASSWNREEKIPKTVE 62
Query: 234 PTLRRIDVADVG---ETVLADTVGF 255
+ + G + + DT GF
Sbjct: 63 IKAIGHVIEEGGVKMKLTVIDTPGF 87
>2QOR-A nrPDB
Length = 204
Score = 29.3 bits (64), Expect = 3.3, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Query: 195 ADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVG 254
A +P + + G + GK TL ++ + R + V D
Sbjct: 10 ARIPPLVVCGPSGVGKGTLIKKVLSEFPSRFRFSISCTTRNKREKETNGVDY-YFVDKDD 68
Query: 255 FIRHLPHDLVAAF 267
F R L F
Sbjct: 69 FERKLKEGQFLEF 81
>3RAP-R nrPDB
Length = 167
Score = 29.3 bits (64), Expect = 3.4, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 51/143 (35%), Gaps = 12/143 (8%)
Query: 224 AADQLFATLDPTLRRIDVADVGETV-LADTVGFIRHLPHDLVAAFKATLQETRQATLLLH 282
D + I+V + + DT G + ++ + L+
Sbjct: 29 IEKYDPTIEDFYRKEIEVDSSPSVLEILDTAG-----TEQFASMRDLYIKNGQGFILVYS 83
Query: 283 VIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRID----RDEENKPN 338
+++ + + + ++ ++P +LV NK+D+ + E EE
Sbjct: 84 LVNQQSFQDIKPMRD--QIIRVKRYEKVPVILVGNKVDLESEREVSSSEGRALAEEWGCP 141
Query: 339 RVWLSAQTGAGIPQLFQALTERL 361
+ SA++ + +LF + ++
Sbjct: 142 FMETSAKSKTMVDELFAEIVRQM 164
>4RG8-A nrPDB
Length = 523
Score = 29.3 bits (64), Expect = 3.6, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 54/127 (42%), Gaps = 6/127 (4%)
Query: 44 VITGSRKAPHPKYFVGEGKAVEIAEAVKATGASVVLFDHALSPAQER--NLERL-CECRV 100
V+ +R +P V +V+ + L + +PA + +ER+ +
Sbjct: 286 VVALARHPRNPNGVVVYDLSVDPTPLIDLNAED--LRERLFTPASKLPPGVERIALKTVH 343
Query: 101 IDRTGLILDIFAQRARTHEGKLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQL 160
+++ +I + A R++ E +LQ++L + RL R WT ++ + + GP
Sbjct: 344 LNKCPVIAPLTALRSQDTE-RLQIDLDRCNRHLDRLKREWTLPKKIREAMTYNGPETDTD 402
Query: 161 ETDRRLL 167
+ D L
Sbjct: 403 DPDLMLY 409
>4MKI-B nrPDB
Length = 298
Score = 29.3 bits (64), Expect = 3.6, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 200 VSLVGYTNAGKSTLFNRITE-ARVYAADQLFATLDPTLRRIDVADVGETV 248
V ++G+T +GKSTL ++ + +D T +++ + D+ + V
Sbjct: 40 VGIIGHTGSGKSTLIQQLNGLLKPSKGKIYINGIDITDKKVSLKDIRKQV 89
>5ZHX-e nrPDB
Length = 198
Score = 28.9 bits (63), Expect = 3.8, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 60/185 (32%), Gaps = 15/185 (8%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
+ +VG GK+ L ++ + + + + + I+V E L DT G
Sbjct: 13 LVIVGDGACGKTCLLIVFSKDQ-FPEVYVPTVFENYVADIEVDGKQVELALWDTAG---- 67
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
D + ++L ENI T + +P +LV NK
Sbjct: 68 -QEDYDRLRPLSYP---DTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK 123
Query: 319 IDMLEDFEPRID----RDEENKPNRVWLSAQTGAGIPQLF-QALTERLSGEVAQHTLRLP 373
D+ D R + + E KP A + A T+ EV + R
Sbjct: 124 KDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 183
Query: 374 PQEGR 378
Q R
Sbjct: 184 LQARR 188
>3CRV-A nrPDB
Length = 551
Score = 28.9 bits (63), Expect = 3.8, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 48/127 (37%), Gaps = 13/127 (10%)
Query: 212 TLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATL 271
+L N + +A V A + +D ID+ ++ D + + L
Sbjct: 141 SLLNSLYKADVIALTYPYFFIDRYREFIDIDLREYMIVIDEAHNLDKVNE---------L 191
Query: 272 QETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIP---TLLVMNKIDMLEDFEPR 328
+E + + + + + +E+ ++ +L ++ +P + V N + ++
Sbjct: 192 EERSLSEITIQMA-IKQSKSEESRRILSKLLNQLREVVLPDEKYIKVENVPKLSKEELEI 250
Query: 329 IDRDEEN 335
+ D E+
Sbjct: 251 LADDYED 257
>1WMS-A nrPDB
Length = 177
Score = 28.9 bits (63), Expect = 4.1, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 62/174 (35%), Gaps = 23/174 (13%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259
V L+G GKS+L NR + QLF T+ D+ G V T+
Sbjct: 10 VILLGDGGVGKSSLMNRYVTNK--FDTQLFHTIGVEFLNKDLEVDGHFV---TMQIWDTA 64
Query: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAH-------EIPT 312
+ + + LL +D + ++ + ++ +E + P
Sbjct: 65 GQERFRSLRTPFYRGSDCCLLTFSVDDS-----QSFQNLSNWKKEFIYYADVKEPESFPF 119
Query: 313 LLVMNKIDMLE-----DFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERL 361
+++ NKID+ E + RD + P SA+ + F+ R+
Sbjct: 120 VILGNKIDISERQVSTEEAQAWCRDNGDYP-YFETSAKDATNVAAAFEEAVRRV 172
>5JCP-B nrPDB
Length = 419
Score = 28.9 bits (63), Expect = 4.3, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 45/143 (31%), Gaps = 11/143 (7%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
+ +VG GK+ L + + + + + I+V E L DT G
Sbjct: 246 LVIVGDGACGKTCLL-IVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG---- 300
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
D + ++L ENI T + +P +LV NK
Sbjct: 301 -QEDYDRLRPLSYP---DTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK 356
Query: 319 IDMLEDFEPRIDRDEENKPNRVW 341
D L + E + K V
Sbjct: 357 KD-LRNDEHTRRELAKMKQEPVK 378
>4V6W-Az nrPDB
Length = 844
Score = 28.9 bits (63), Expect = 4.3, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 61/176 (34%), Gaps = 32/176 (18%)
Query: 193 IKADVPTVSLVGYTNAGKSTLFNRI-TEARVYAADQLFATL------DPTLRRIDVA--- 242
K ++ +S++ + + GKSTL + + ++A + A + T D R I +
Sbjct: 15 KKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGAKAGETRFTDTRKDEQERCITIKSTA 74
Query: 243 -------DVGETVLADTV--------GFIRHL--PHDLVAAFKATLQETRQATLLLHVID 285
+ + V GF+ +L V R L V+D
Sbjct: 75 ISMYFEVEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVD 134
Query: 286 AADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKID-MLEDFEPRIDRDEENKPNRV 340
+ TVL + A I +L MNK+D L + + + + V
Sbjct: 135 CVSGVCVQT----ETVLRQAIAERIKPILFMNKMDRALLELQLDAEELYQTFQRIV 186
>5C2K-A nrPDB
Length = 415
Score = 28.9 bits (63), Expect = 4.3, Method: Composition-based stats.
Identities = 37/185 (20%), Positives = 60/185 (32%), Gaps = 15/185 (8%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
+ +VG GK+ L ++ + + + + + I+V E L DT G
Sbjct: 15 LVIVGDGACGKTCLLIVFSKDQ-FPEVYVPTVFENYVADIEVDGKQVELALWDTAG---- 69
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
D + ++L ENI T + +P +LV NK
Sbjct: 70 -QEDYDRLRPLSYP---DTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK 125
Query: 319 IDMLEDFEPRID----RDEENKPNRVWLSAQTGAGIPQLF-QALTERLSGEVAQHTLRLP 373
D+ D R + + E KP A + A T+ EV + R
Sbjct: 126 KDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAA 185
Query: 374 PQEGR 378
Q R
Sbjct: 186 LQARR 190
>1MJ1-A nrPDB
Length = 405
Score = 28.9 bits (63), Expect = 4.5, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 52/137 (37%), Gaps = 15/137 (10%)
Query: 200 VSLVGYTNAGKSTLFNRIT------EARVYAADQLFATLDPTLRRIDVADVGETVLADTV 253
V +G+ + GK+TL +T V D +D T +
Sbjct: 14 VGTIGHVDHGKTTLTAALTYVAAAENRNVEVKDY--GDIDKAREERARGITINTAHVEYE 71
Query: 254 GFIRHLPH----DLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHE 309
RH H K + Q + V+ AAD R+++ E + + ++
Sbjct: 72 TAKRHYSHVDCRGHADYIKNMITGAAQMDGAILVVSAADGRMRQTREHIL-LARQVGVRY 130
Query: 310 IPTLLVMNKIDMLEDFE 326
I ++ MNK+DM++D E
Sbjct: 131 I--VVFMNKVDMVDDRE 145
>2IW3-A nrPDB
Length = 986
Score = 28.9 bits (63), Expect = 4.6, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 164 RRLLRNRIVQIQS-RLERVEKQREQGRQSRIKADVPT-VSLVGYTNAGKSTLFNRITEA 220
+ + IV++ + + + Q + + + ++++G AGKSTL N +T
Sbjct: 664 VKTKQKAIVKVTNMEFQYPGTSKPQITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGE 722
>6HA8-V nrPDB
Length = 548
Score = 28.9 bits (63), Expect = 4.7, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 51/142 (35%), Gaps = 14/142 (9%)
Query: 199 TVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRH 258
+ ++G AGKSTL + I A Q+ D L ++ + T +
Sbjct: 38 IIGIIGKNGAGKSTLLHLIHNDLAPAQGQI-LRKDIKLALVEQETAAYSFADQTPAEKKL 96
Query: 259 LPH-----------DLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDA 307
L KA L + L ++D + E +++ +++++
Sbjct: 97 LEKWHVPLRDFHQLSGGEKLKARLAKGLSEDADLLLLDQPTNHLDE--KSLQFLIQQLKH 154
Query: 308 HEIPTLLVMNKIDMLEDFEPRI 329
+ +LV + L++ +I
Sbjct: 155 YNGTVILVSHDRYFLDEAATKI 176
>3ZJC-A nrPDB
Length = 305
Score = 28.9 bits (63), Expect = 4.7, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVA-DVGETVLADTVGFIR 257
+ LVG T +GKS N I ++ + + ++ + ++ DT G
Sbjct: 16 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLFD 74
>1JNY-A nrPDB
Length = 435
Score = 28.9 bits (63), Expect = 4.8, Method: Composition-based stats.
Identities = 20/153 (13%), Positives = 47/153 (30%), Gaps = 26/153 (16%)
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPH 261
++G+ + GKSTL R+ R + ++ + +++ L D + R
Sbjct: 11 VIGHVDHGKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLLDRLKEERERGV 70
Query: 262 DLVAAFKAT----------------------LQETRQATLLLHVIDAADVRVQENI---- 295
+ F + QA + V+ A + +
Sbjct: 71 TINLTFMRFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSVEG 130
Query: 296 EAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPR 328
+ ++ ++ +NK+D+ E
Sbjct: 131 QTREHIILAKTMGLDQLIVAVNKMDLTEPPYDE 163
>4FN5-A nrPDB
Length = 709
Score = 28.9 bits (63), Expect = 4.9, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 249 LADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAH 308
+ DT G + D + +L+ + V ++ TV + + +
Sbjct: 89 VIDTPGHV-----DFTIEVERSLRVL---DGAVVVFCGTSGVEPQS----ETVWRQANKY 136
Query: 309 EIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLF 354
+P ++ +NK+D R+ + + + Q G + F
Sbjct: 137 GVPRIVYVNKMDRQGANFLRVVEQIKKRLGHTPVPVQLAIGAEENF 182
>3JBN-AL nrPDB
Length = 211
Score = 28.9 bits (63), Expect = 4.9, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 1/118 (0%)
Query: 134 TRLVRGWTHLERQKGGIGLRGPGETQLETDRRLLRNRIVQIQSRLERVEKQREQGRQSRI 193
TRL +G+T E + G+ R + D+R + +ER+ K + +
Sbjct: 67 TRLGKGFTFEELKGAGLTPRAAQTIGICYDKRRKNRSEESLTKNVERLLKYKNSLVMIPL 126
Query: 194 KADVPTVSLVGYT-NAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLA 250
K + + G +A K+T+ + + + + P I+V+ + + LA
Sbjct: 127 KKNKAKKGIGGIPADADKNTIKEFRNKKPLLSIFKKEKNTKPFYETIEVSKIDKEFLA 184
>4NKR-A nrPDB
Length = 166
Score = 28.5 bits (62), Expect = 5.0, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 198 PTVSLVGYTNAGKSTLFNRITEA 220
P V +VG+ N+GK+T RI E
Sbjct: 2 PIVQVVGFQNSGKTTFIERILEK 24
>3RYT-C nrPDB
Length = 180
Score = 28.5 bits (62), Expect = 5.3, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 51/173 (29%), Gaps = 13/173 (7%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRH 258
+VG GK+ L T + + + D + V L DT G +
Sbjct: 9 CVVVGDGAVGKTCLLISYT-TNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGLEDY 67
Query: 259 LPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNK 318
L Q + L EN+ A P +LV K
Sbjct: 68 -------DRLRPLSY-PQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTK 119
Query: 319 IDMLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLR 371
+D+ +D + E+ ++ G + + A+ + Q L+
Sbjct: 120 LDLRDDKDTIEKLKEKK---LTPITYPQGLAMAKEIGAVKYLECSALTQRGLK 169
>2V1U-A nrPDB
Length = 387
Score = 28.5 bits (62), Expect = 5.4, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Query: 296 EAVNTVLEEIDAHEIPTLLVMNKIDML------EDFEPRIDRDEENKPNRVWLSAQTGAG 349
E +++ + ++V+++ID L +D RI R + +RVW+S
Sbjct: 116 EVYERLVKRLSRLRGIYIIVLDEIDFLPKRPGGQDLLYRITRINQELGDRVWVSLVGITN 175
Query: 350 IPQLFQALTERLSGEVAQHTLRLPP 374
+ L R+ + + L PP
Sbjct: 176 SLGFVENLEPRVKSSLGEVELVFPP 200
>1IY1-A nrPDB
Length = 254
Score = 28.5 bits (62), Expect = 5.5, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 54/166 (32%), Gaps = 28/166 (16%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFAT---LDPTLRRIDVADVGETVLADTVGFI 256
V LVG GK+ L + A F T D + V L +T
Sbjct: 52 VLLVGPPGVGKTHLARAVAGE----ARVPFITASGSDFVEMFVGVGAARVRDLFETAK-- 105
Query: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVM 316
RH P F + + E + +N +L E+D E T +V+
Sbjct: 106 RHAP---CIVFIDEIDAVGRKRG-----SGVGGGNDEREQTLNQLLVEMDGFEKDTAIVV 157
Query: 317 ----NKIDMLED-------FEPRIDRDEENKPNRVWLSAQTGAGIP 351
N+ D+L+ F+ +I D + R + G P
Sbjct: 158 MAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKP 203
>3T34-A nrPDB
Length = 360
Score = 28.5 bits (62), Expect = 5.7, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 24/64 (37%)
Query: 171 IVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFA 230
+ +IQ + + + +P +++VG ++GKS++ I
Sbjct: 8 VNKIQRACTALGDHGDSSALPTLWDSLPAIAVVGGQSSGKSSVLESIVGKDFLPRGSGIV 67
Query: 231 TLDP 234
T P
Sbjct: 68 TRRP 71
>6BZR-B nrPDB
Length = 251
Score = 28.2 bits (61), Expect = 6.5, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRR 238
V +VG T AGKS+L + + + A ++ P
Sbjct: 43 VGIVGRTGAGKSSLASGLLRLQEAAEGGIWIDGVPIAHV 81
>5NIK-J nrPDB
Length = 654
Score = 28.2 bits (61), Expect = 6.8, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 200 VSLVGYTNAGKSTLFNRI------TEARVYAADQLFATLD 233
V++VG + +GKSTL N + T A Q ATLD
Sbjct: 37 VAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLD 76
>2FN4-A nrPDB
Length = 181
Score = 28.2 bits (61), Expect = 7.0, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 50/157 (31%), Gaps = 17/157 (10%)
Query: 224 AADQLFATLDPTLRRIDVADVGETV-LADTVGFIRHLPHDLVAAFKATLQETRQATLLLH 282
+D D + V + + + DT G + A + ++ LL+
Sbjct: 35 VSDYDPTIEDSYTKICSVDGIPARLDILDTAG-----QEEFGAMREQYMRAGH-GFLLVF 88
Query: 283 VIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWL 342
I+ E + +L D + P +LV NK D LE + +
Sbjct: 89 AINDRQSF-NEVGKLFTQILRVKDRDDFPVVLVGNKAD-LESQRQVPRSEASAFGASHHV 146
Query: 343 -----SAQTGAGIPQLFQALTERLSGEVAQHTLRLPP 374
SA+ + + F+ L + LPP
Sbjct: 147 AYFEASAKLRLNVDEAFEQLVRAV---RKYQEQELPP 180
>2P67-A nrPDB
Length = 341
Score = 28.2 bits (61), Expect = 7.1, Method: Composition-based stats.
Identities = 45/252 (17%), Positives = 78/252 (30%), Gaps = 62/252 (24%)
Query: 161 ETDRRLL---RNRIVQIQSRLERVEKQREQGRQSRIKADVPTVS------LVGYTNAGKS 211
E+ RRL R + Q + +E + + + A +P + G AGKS
Sbjct: 11 ESIRRLRQGERATLAQAMTLVESRHPRHQALSTQLLDAIMPYCGNTLRLGVTGTPGAGKS 70
Query: 212 TLFNR----ITEARVYAADQLFATLDPTLRRIDVADVGETVLADT----VGFIRHLPHD- 262
T + + A P + D +T + D FIR +P
Sbjct: 71 TFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGD--KTRMNDLARAEAAFIRPVPSSG 128
Query: 263 ------------------------LVAAFKATLQETRQATLLLHVIDAADVRVQENIEAV 298
+V ET A ++ I ++++ +
Sbjct: 129 HLGGASQRARELMLLCEAAGYDVVIVETVGVGQSETEVARMVDCFISLQIAGGGDDLQGI 188
Query: 299 NTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDR-------------DEENKPNRVWLSAQ 345
L E+ L+V+NK D I R +E +P + SA
Sbjct: 189 KKGLMEVAD-----LIVINKDDGDNHTNVAIARHMYESALHILRRKYDEWQPRVLTCSAL 243
Query: 346 TGAGIPQLFQAL 357
GI +++ A+
Sbjct: 244 EKRGIDEIWHAI 255
>3C5C-A nrPDB
Length = 187
Score = 28.2 bits (61), Expect = 7.2, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 46/131 (35%), Gaps = 12/131 (9%)
Query: 200 VSLVGYTNAGKSTL-FNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRH 258
++++G AGKS L +T+ + D + +D + DT
Sbjct: 24 LAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVD-HQPVHLRVMDTADLDTP 82
Query: 259 LP-HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEA-VNTVLEEIDAHEIPTLLVM 316
+ A L +++ +D+ + + + + IP LL+
Sbjct: 83 RNCERYLNWAHAFL--------VVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLG 134
Query: 317 NKIDMLEDFEP 327
NK+DM + +
Sbjct: 135 NKLDMAQYRQV 145
>5TV4-A nrPDB
Length = 605
Score = 28.2 bits (61), Expect = 7.6, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Query: 191 SRIKADVP---TVSLVGYTNAGKSTLFNRITE 219
I +P TV+LVG + +GKST+ + IT
Sbjct: 383 RNINLKIPAGKTVALVGRSGSGKSTIASLITR 414
>5GAD-l nrPDB
Length = 497
Score = 28.2 bits (61), Expect = 8.1, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 71/219 (32%), Gaps = 24/219 (10%)
Query: 156 GETQLETDRRLLRNRIVQIQSRLERVEKQ-----REQGRQSRIKADVP---------TVS 201
+ +ET R+++ N + R + +E+ + K D P +
Sbjct: 238 ADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEPLNVEGKAPFVIL 297
Query: 202 LVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVG-ETVLADTVGFIRHLP 260
+VG GK+T ++ + T R V + + +H
Sbjct: 298 MVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTG 357
Query: 261 HDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKID 320
D + +Q + + + + D ++ + ++EE+ + VM K+D
Sbjct: 358 ADSASVIFDAIQAAKARNIDVLIAD-----TAGRLQNKSHLMEELKK----IVRVMKKLD 408
Query: 321 MLEDFEPRIDRDEENKPNRVWLSAQTGAGIPQLFQALTE 359
+ E + D N V + + LT+
Sbjct: 409 VEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTK 447
>5AZS-A nrPDB
Length = 468
Score = 27.8 bits (60), Expect = 8.9, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 351 PQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQLQA 388
P+L Q + E+ + + E RLR+R + A
Sbjct: 250 PKLLQDIAPGTPSELIERRPDILAAEHRLRARNADIGA 287
>3GD7-A nrPDB
Length = 390
Score = 27.8 bits (60), Expect = 9.0, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 200 VSLVGYTNAGKSTLFNRITEA 220
V L+G T +GKSTL +
Sbjct: 50 VGLLGRTGSGKSTLLSAFLRL 70
>2W6D-A nrPDB
Length = 695
Score = 27.8 bits (60), Expect = 9.0, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 5/58 (8%)
Query: 174 IQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFAT 231
++ +E + + +Q + ++G GKST N + + +D T
Sbjct: 51 LERDIEDITIASKNLQQGVFRL-----LVLGDMKRGKSTFLNALIGENLLPSDVNPCT 103
>3L6X-A nrPDB
Length = 584
Score = 27.8 bits (60), Expect = 9.1, Method: Composition-based stats.
Identities = 17/137 (12%), Positives = 47/137 (34%), Gaps = 12/137 (8%)
Query: 232 LDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRV 291
+P E+VL +T G +R++ + A + + L+ ++ A +
Sbjct: 192 REPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQK 251
Query: 292 QENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEENKPN------------R 339
+ + V + + + + + ++ P + + P R
Sbjct: 252 DSDSKLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGTSPARGYELLFQPEVVR 311
Query: 340 VWLSAQTGAGIPQLFQA 356
+++S + P + +A
Sbjct: 312 IYISLLKESKTPAILEA 328
>2VE7-C nrPDB
Length = 250
Score = 27.8 bits (60), Expect = 9.1, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Query: 338 NRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEED 397
L+A + +L ERL EV + T P + ++Q+ IE E+ E
Sbjct: 156 KMQQLNAAHQEALMKL-----ERLEKEVDEDTTVTIPSAVYVAQLYHQVSKIEWEYECEP 210
Query: 398 GSV 400
G V
Sbjct: 211 GMV 213
>5XG2-A nrPDB
Length = 260
Score = 27.8 bits (60), Expect = 9.7, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 59/142 (41%), Gaps = 5/142 (3%)
Query: 57 FVGEGKAVEIAEAVKATGASVVLFDHALSPAQER--NLERLCECRVIDRTGLILDIFAQR 114
+ GE + E + A ++ + L +ER NL RL E + + + L + +
Sbjct: 62 YEGEARIKRAEEEKERLKAEILTGEARLPGLRERAENLRRLVEEKRAEISELERRLSSIT 121
Query: 115 ARTHEGKLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQLETDRRLLRNRIVQI 174
++ G L+ + +LR + L + LE + + E + + + + RI ++
Sbjct: 122 SKRSGGSLESQSFELRIKLSDLEK---ELELARKDLEKVLAEERAVREEIEVAKRRINEL 178
Query: 175 QSRLERVEKQREQGRQSRIKAD 196
+ +ER + + R + +
Sbjct: 179 DTLIERERGELAKLRGRIERLE 200
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.315 0.130 0.330
Lambda K H
0.267 0.0397 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,061,582
Number of Sequences: 36641
Number of extensions: 505616
Number of successful extensions: 2863
Number of sequences better than 10.0: 380
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 307
Number of HSP's that attempted gapping in prelim test: 2383
Number of HSP's gapped (non-prelim): 553
length of query: 426
length of database: 10,336,785
effective HSP length: 100
effective length of query: 326
effective length of database: 6,672,685
effective search space: 2175295310
effective search space used: 2175295310
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.8 bits)