BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= P24559
(344 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
3JVU-A nrPDB 702 0.0
2EWW-A nrPDB 353 8e-98
5ZFQ-A nrPDB 351 2e-97
5FL3-A nrPDB 303 1e-82
2EYU-A nrPDB 272 1e-73
4KSS-A nrPDB 137 7e-33
1P9R-A nrPDB 136 1e-32
4PHT-A nrPDB 133 1e-31
5ZFR-A nrPDB 128 3e-30
5TSG-B nrPDB 126 1e-29
3JC8-Ba nrPDB 126 1e-29
6F8L-G nrPDB 117 1e-26
1NLZ-A nrPDB 50 2e-06
2GZA-A nrPDB 37 0.011
6BZS-A nrPDB 35 0.066
4W84-A nrPDB 34 0.097
5YQS-A nrPDB 33 0.17
2GA8-A nrPDB 32 0.39
6EF1-K nrPDB 32 0.41
5ZME-A nrPDB 32 0.44
2EBS-A nrPDB 32 0.45
2BDT-A nrPDB 32 0.46
5WVI-K nrPDB 32 0.52
1SXJ-E nrPDB 32 0.58
6CUM-A nrPDB 31 0.61
3E70-C nrPDB 31 0.73
1FP7-A nrPDB 31 0.80
2ZBZ-A nrPDB 31 0.92
2ZAO-A nrPDB 31 1.00
1XWI-A nrPDB 30 1.0
4XGU-A nrPDB 30 1.6
2P2N-A nrPDB 30 1.9
6GFL-A nrPDB 30 2.0
2ZB2-A nrPDB 30 2.2
5U1D-B nrPDB 29 2.3
1JI0-A nrPDB 29 2.8
5VC7-A nrPDB 29 3.1
1IHU-A nrPDB 29 3.2
5G4G-A nrPDB 29 3.3
3B96-A nrPDB 29 3.8
2WJV-A nrPDB 28 4.4
1XA4-A nrPDB 28 5.3
6EJ5-A nrPDB 28 5.5
6EPG-B nrPDB 28 7.1
1BRL-B nrPDB 28 7.3
2V3C-C nrPDB 28 7.5
4YMS-J nrPDB 28 7.6
3S1A-A nrPDB 28 8.2
6HUF-A nrPDB 28 8.4
4AYX-A nrPDB 27 8.9
>3JVU-A nrPDB
Length = 356
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/344 (100%), Positives = 344/344 (100%)
Query: 1 MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQR 60
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQR
Sbjct: 1 MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQR 60
Query: 61 KDFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSD 120
KDFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSD
Sbjct: 61 KDFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSD 120
Query: 121 VPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHR 180
VPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHR
Sbjct: 121 VPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHR 180
Query: 181 DTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV 240
DTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
Sbjct: 181 DTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV 240
Query: 241 VDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIMIGTPAIRNLIREDKVAQ 300
VDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIMIGTPAIRNLIREDKVAQ
Sbjct: 241 VDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIMIGTPAIRNLIREDKVAQ 300
Query: 301 MYSAIQTGGSLGMQTLDMCLKGLVAKGLISRENAREKAKIPENF 344
MYSAIQTGGSLGMQTLDMCLKGLVAKGLISRENAREKAKIPENF
Sbjct: 301 MYSAIQTGGSLGMQTLDMCLKGLVAKGLISRENAREKAKIPENF 344
>2EWW-A nrPDB
Length = 372
Score = 353 bits (905), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 176/346 (50%), Positives = 243/346 (70%), Gaps = 2/346 (0%)
Query: 1 MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRI-NLPPLEHKQVHALIYDIMNDKQ 59
+ I E++ + + GASD+HL+AG PP +R+DG ++ + + P L + L Y +M++K
Sbjct: 13 LKILEIIKEAIELGASDIHLTAGAPPAVRIDGYIKFLKDFPRLTPEDTQKLAYSVMSEKH 72
Query: 60 RKDFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVS 119
R+ EE + DFSF V GV RFR N F Q A R++P+++ ++LG+ + +
Sbjct: 73 RQKLEENGQVDFSFGVRGVGRFRANVFYQRGSVAAALRSLPAEIPEFKKLGLPDKVLELC 132
Query: 120 DVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVH 179
GL+LVTGPTGSGKSTT+A+M+DY+N TK +HI+TIEDPIE+V + KK +VNQREV
Sbjct: 133 HRKMGLILVTGPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEYVFKHKKSIVNQREVG 192
Query: 180 RDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDR 239
DT F++ALR+ALREDPD+I VGEMRDLET+ AL AAETGHLVFGTLHT +A TI R
Sbjct: 193 EDTKSFADALRAALREDPDVIFVGEMRDLETVETALRAAETGHLVFGTLHTNTAIDTIHR 252
Query: 240 VVDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIMIGTPAIRNLIREDKVA 299
+VD+FP ++ VR +LS LQ +ISQ L+ KIGGGRV A+E++I AIRNLIRE+K+
Sbjct: 253 IVDIFPLNQQEQVRIVLSFILQGIISQRLLPKIGGGRVLAYELLIPNTAIRNLIRENKLQ 312
Query: 300 QMYSAIQTG-GSLGMQTLDMCLKGLVAKGLISRENAREKAKIPENF 344
Q+YS +Q+G GMQT++ L L +GLI+ E+A E + P+
Sbjct: 313 QVYSLMQSGQAETGMQTMNQTLYKLYKQGLITLEDAMEASPDPKEL 358
>5ZFQ-A nrPDB
Length = 390
Score = 351 bits (901), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 176/345 (51%), Positives = 234/345 (67%), Gaps = 2/345 (0%)
Query: 2 DITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQRK 61
++ +LL +G SDLH++ PP IRVDG + + +PPL L Y I+ ++Q+
Sbjct: 28 NMHQLLTELVNRGGSDLHITTNSPPQIRVDGQLIPLEMPPLNAVDTKQLCYSILTEQQKH 87
Query: 62 DFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSDV 121
FEE E D SF + G++RFR N F Q VFR IP K+LT EELG+ V K +++
Sbjct: 88 KFEEANELDLSFGIKGLSRFRGNVFIQRGAVAGVFRVIPYKILTFEELGLPVVVKELAEK 147
Query: 122 PRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRD 181
PRGL+LVTGPTGSGKSTTLAA++D +N ++ HI+TIEDPIE++H K C+VNQREV D
Sbjct: 148 PRGLILVTGPTGSGKSTTLAAIIDKINTERHDHIVTIEDPIEYLHPHKSCVVNQREVGAD 207
Query: 182 TLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRVV 241
T F AL+ LR+DPD++LVGE+RDLETI ALT AETGHL TLHT SA +TI+R+V
Sbjct: 208 TKSFKNALKYILRQDPDVVLVGELRDLETIEAALTLAETGHLCLATLHTNSAVQTINRIV 267
Query: 242 DVFPAEEKAMVRSMLSESLQSVISQTLIKKIGG-GRVAAHEIMIGTPAIRNLIREDKVAQ 300
DVFP ++ VR+ LS L+ V+SQTL+ + G GRV A E+M+ PAIRNLIREDK+ Q
Sbjct: 268 DVFPPYQQPQVRAQLSFVLEGVMSQTLLPNVSGKGRVLALEVMVPNPAIRNLIREDKIHQ 327
Query: 301 MYSAIQTGG-SLGMQTLDMCLKGLVAKGLISRENAREKAKIPENF 344
+YS +Q G GMQT++ L L+ K IS + A ++ P+
Sbjct: 328 IYSQMQVGQEKFGMQTMNQSLFSLLQKRRISLDVAMARSSDPDEL 372
>5FL3-A nrPDB
Length = 368
Score = 303 bits (775), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/345 (47%), Positives = 221/345 (64%), Gaps = 3/345 (0%)
Query: 3 ITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQRKD 62
+ E+L + ASD+HL AG PP +R+DG +R PL K+V A+ ++ +Q ++
Sbjct: 12 LVEMLKAMVQARASDIHLQAGAPPTVRIDGKLRPFGNRPLTPKEVEAIARALLTPEQLEE 71
Query: 63 FEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMG-EVFKRVSDV 121
E E DF++ +PGVARFR N Q G V R + + + E LG+ EV + ++
Sbjct: 72 LEYRKEMDFAYTIPGVARFRCNLLRQRGSFGLVMRVVSEVIPSFEALGLPREVMESLAAK 131
Query: 122 PRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRD 181
RGL+LVTGPTGSGKSTTLAA++D++N +I+TIEDPIEF+H+ KK LV QREV D
Sbjct: 132 ERGLILVTGPTGSGKSTTLAALIDHINLHYAKNIITIEDPIEFLHKHKKSLVVQREVGLD 191
Query: 182 TLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRVV 241
T F L+ ALR+DPD+I+VGEMRD ET+ AL AA+TGHLV TLHT A +TI+R++
Sbjct: 192 TDSFYTGLKYALRQDPDVIMVGEMRDRETVEAALMAAQTGHLVLSTLHTLDAWRTINRII 251
Query: 242 DVFPAEEKAMVRSMLSESLQSVISQTLIKKIGG-GRVAAHEIMIGTPAIRNLIR-EDKVA 299
D FP E VR +L+ESL ++SQ L+ K G GRV A EI+I TP +R L++ E+K
Sbjct: 252 DFFPLHEHRQVRVLLAESLLGILSQRLLPKADGQGRVLALEILIATPYVRELLKDEEKTP 311
Query: 300 QMYSAIQTGGSLGMQTLDMCLKGLVAKGLISRENAREKAKIPENF 344
Q+ A+ G GM+T D L L +GLIS E+A A P F
Sbjct: 312 QIKEAMMEGSLYGMRTFDQHLVELYTEGLISLEDALSAATSPHEF 356
>2EYU-A nrPDB
Length = 261
Score = 272 bits (696), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 136/247 (55%), Positives = 183/247 (74%), Gaps = 1/247 (0%)
Query: 99 IPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTI 158
+P+++ ++LG+ + + GL+LVTGPTGSGKSTT+A+M+DY+N TK +HI+TI
Sbjct: 1 MPAEIPEFKKLGLPDKVLELCHRKMGLILVTGPTGSGKSTTIASMIDYINQTKSYHIITI 60
Query: 159 EDPIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAA 218
EDPIE+V + KK +VNQREV DT F++ALR+ALREDPD+I VGEMRDLET+ AL AA
Sbjct: 61 EDPIEYVFKHKKSIVNQREVGEDTKSFADALRAALREDPDVIFVGEMRDLETVETALRAA 120
Query: 219 ETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVA 278
ETGHLVFGTLHT +A TI R+VD+FP ++ VR +LS LQ +ISQ L+ KIGGGRV
Sbjct: 121 ETGHLVFGTLHTNTAIDTIHRIVDIFPLNQQEQVRIVLSFILQGIISQRLLPKIGGGRVL 180
Query: 279 AHEIMIGTPAIRNLIREDKVAQMYSAIQTG-GSLGMQTLDMCLKGLVAKGLISRENAREK 337
A+ ++I AIRNLIRE+K+ Q+YS +Q+G GMQT++ L L +GLI+ E+A E
Sbjct: 181 AYGLLIPNTAIRNLIRENKLQQVYSLMQSGQAETGMQTMNQTLYKLYKQGLITLEDAMEA 240
Query: 338 AKIPENF 344
+ P+
Sbjct: 241 SPDPKEL 247
>4KSS-A nrPDB
Length = 581
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 160/284 (56%), Gaps = 28/284 (9%)
Query: 3 ITELLAFSAKQGASDLHLSA---GLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQ 59
I +L + K+GASD+H+ L RVDG +R + P +++ +L+ +
Sbjct: 29 INAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPS---RKLSSLLVSRVKVMA 85
Query: 60 RKDF-EEFLETD--FSFEVPGVA-RFRVNAFNQNRGAGAVFRTIPSKV--LTMEELGMG- 112
+ D E+ + D S + G A RV+ + G V R + L + LGM
Sbjct: 86 KLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTA 145
Query: 113 ---EVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESK 169
+ F+R+ P G++LVTGPTGSGKSTTL A L LN+++ +ILT+EDPIEF +
Sbjct: 146 HNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSE-RNILTVEDPIEFDIDG- 203
Query: 170 KCLVNQREVH-RDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTL 228
+ Q +V+ R + F+ LR+ LR+DPD+++VGE+RDLET ++A+ A+ TGHLV TL
Sbjct: 204 ---IGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTL 260
Query: 229 HTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIKKI 272
HT +A + R+ D+ + ++S SL V++Q L++ +
Sbjct: 261 HTNTAVGAVTRLRDM------GIEPFLISSSLLGVLAQRLVRTL 298
>1P9R-A nrPDB
Length = 418
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 160/284 (56%), Gaps = 28/284 (9%)
Query: 3 ITELLAFSAKQGASDLHLSA---GLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQ 59
I +L + K+GASD+H+ L RVDG +R + P +++ +L+ +
Sbjct: 37 INAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPS---RKLSSLLVSRVKVMA 93
Query: 60 RKDF-EEFLETD--FSFEVPGVA-RFRVNAFNQNRGAGAVFRTIPSKV--LTMEELGMG- 112
+ D E+ + D S + G A RV+ + G V R + L + LGM
Sbjct: 94 KLDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTA 153
Query: 113 ---EVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESK 169
+ F+R+ P G++LVTGPTGSGKSTTL A L LN+++ +ILT+EDPIEF +
Sbjct: 154 HNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSE-RNILTVEDPIEFDIDG- 211
Query: 170 KCLVNQREVH-RDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTL 228
+ Q +V+ R + F+ LR+ LR+DPD+++VGE+RDLET ++A+ A+ TGHLV TL
Sbjct: 212 ---IGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTL 268
Query: 229 HTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIKKI 272
HT +A + R+ D+ + ++S SL V++Q L++ +
Sbjct: 269 HTNTAVGAVTRLRDM------GIEPFLISSSLLGVLAQRLVRTL 306
>4PHT-A nrPDB
Length = 500
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/287 (35%), Positives = 155/287 (54%), Gaps = 34/287 (11%)
Query: 3 ITELLAFSAKQGASDLHLSAG---LPPMIRVDGDVRRI-----NLPPLEHKQVHALI-YD 53
I +L + K+GASD+H+ L RVDG +R + L PL +V + D
Sbjct: 124 INAMLGEAIKEGASDIHIETFEKILSIRFRVDGVLRDVLSPSRKLAPLLVSRVKVMAKLD 183
Query: 54 IMNDKQRKDFEEFLETDFSFEVPGVA-RFRVNAFNQNRGAGAVFRTIPSKV--LTMEELG 110
I + +D S + G A RV+ + G V R + L + LG
Sbjct: 184 IAEKRVPQDGR------ISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLG 237
Query: 111 MGEV----FKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVH 166
M V F+ + P G++LVTGPTGSGKSTTL A L LN+ + +ILT+EDPIEF
Sbjct: 238 MTPVNHDNFRHLISRPHGIILVTGPTGSGKSTTLYAGLQELNSNE-RNILTVEDPIEFDI 296
Query: 167 ESKKCLVNQREVH-RDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVF 225
+ + Q +V+ + + F+ LR+ LR+DPD+++VGE+RDLET ++A+ A+ TGHLV
Sbjct: 297 DG----IGQTQVNPKVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVM 352
Query: 226 GTLHTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIKKI 272
TLHT +A I R+ D+ + ++S SL V++Q L++ +
Sbjct: 353 STLHTNTAVGAITRLRDM------GIEPFLISSSLLGVLAQRLVRTL 393
>5ZFR-A nrPDB
Length = 582
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 149/293 (50%), Gaps = 27/293 (9%)
Query: 6 LLAFSAKQGASDLHLSA---GLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQRKD 62
+L + K+ ASD+H+ R+DG + + PPL+ K IM D
Sbjct: 204 ILTDAIKKKASDIHIEPYERTFRVRYRIDGVLYEVMKPPLKLKNAITSRIKIMADLDIA- 262
Query: 63 FEEFLETDFSFEVP-GVAR---FRVNAFNQNRGAGAVFRTIPSKVLTMEELGMG------ 112
E L D ++ G + +RV+ G V R + L ++ +G
Sbjct: 263 -ERRLPQDGRIKIKMGGGQDMDYRVSVLPTLFGEKVVLRLLDKSNLQLDMTKLGYEPTAL 321
Query: 113 EVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCL 172
FK P G+VLVTGPTGSGK+ +L + L LN T +I T EDP+EF
Sbjct: 322 SYFKEAIHKPFGMVLVTGPTGSGKTVSLYSALSELNKTT-ENISTAEDPVEFNFAG---- 376
Query: 173 VNQREVHRDT-LGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTT 231
+NQ ++H D L F+ ALRS LR+DPDII++GE+RD ET +A+ AA TGHLV TLHT
Sbjct: 377 INQVQMHEDIGLTFAAALRSFLRQDPDIIMIGEIRDFETAEIAIKAALTGHLVLSTLHTN 436
Query: 232 SAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIMI 284
A TI+R++++ + +++ ++ + +Q L +++ A EI I
Sbjct: 437 DAPATINRLLNM------GVEPFLVASAVNLITAQRLARRVCSECKAVEEIPI 483
>5TSG-B nrPDB
Length = 588
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 132/252 (52%), Gaps = 21/252 (8%)
Query: 6 LLAFSAKQGASDLHLSA---GLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQRKD 62
+L + K+ ASD+H+ R+DG + + PPL+ K IM +
Sbjct: 210 ILTDAIKRKASDIHIEPYERSFRVRYRIDGVLYEVMKPPLKLKNAITSRIKIMAELDIA- 268
Query: 63 FEEFLETDFSFEVP-GVAR---FRVNAFNQNRGAGAVFRTIPSKVLTMEELGMG------ 112
E L D ++ G + +RV+ G V R + L ++ +G
Sbjct: 269 -ERRLPQDGRIKIKLGGGQDMDYRVSVLPTLFGEKVVLRLLDKSNLQLDMTKLGYEPDAL 327
Query: 113 EVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCL 172
FK P G+VLVTGPTGSGK+ +L + L LN T +I T EDP+EF
Sbjct: 328 HYFKEAIHKPFGMVLVTGPTGSGKTVSLYSALGELNKTT-ENISTAEDPVEFNFAG---- 382
Query: 173 VNQREVHRDT-LGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTT 231
+NQ ++H D L F+ ALRS LR+DPDII++GE+RD ET +A+ AA TGHLV TLHT
Sbjct: 383 INQVQMHEDIGLNFAAALRSFLRQDPDIIMIGEIRDFETAEIAIKAALTGHLVLSTLHTN 442
Query: 232 SAAKTIDRVVDV 243
A TI+R++++
Sbjct: 443 DAPATINRLLNM 454
>3JC8-Ba nrPDB
Length = 566
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 113/199 (56%), Gaps = 18/199 (9%)
Query: 81 FRVNAFNQNRGAGAVFRTIPSKVLTMEELGMG------EVFKRVSDVPRGLVLVTGPTGS 134
FRV+ G V R + L ++ +G FK D P G+VLVTGPTGS
Sbjct: 266 FRVSVCPTLFGEKVVMRLLDKSNLQLDMTKLGFDAQPLAWFKEAIDRPYGMVLVTGPTGS 325
Query: 135 GKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRDT-LGFSEALRSAL 193
GK+TTL + L LN +I T EDP+EF +NQ ++H D L F+ ALRS L
Sbjct: 326 GKTTTLYSALSSLNGLD-TNICTAEDPVEFNFAG----INQVQMHDDIGLNFAAALRSFL 380
Query: 194 REDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKAMVR 253
R+DPDII++GE+RD ET + + AA TGHLV TLHT A T+ R++++ +
Sbjct: 381 RQDPDIIMIGEIRDFETAEIGVKAALTGHLVLSTLHTNDAPGTVSRLLNM------GIEP 434
Query: 254 SMLSESLQSVISQTLIKKI 272
+++ SL +++Q L +++
Sbjct: 435 FLVTASLNLILAQRLARRL 453
>6F8L-G nrPDB
Length = 913
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 114/199 (57%), Gaps = 18/199 (9%)
Query: 81 FRVNAFNQNRGAGAVFRTI--PSKVLTMEELGMG----EVFKRVSDVPRGLVLVTGPTGS 134
R++ G AV R + S + +E+LG E FK V P G+ L+TGPTGS
Sbjct: 593 LRLSTLPTVYGEKAVMRLLKKASDIPEIEDLGFAPGVFERFKEVISKPYGIFLITGPTGS 652
Query: 135 GKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRDT-LGFSEALRSAL 193
GKS T ++L + T + TIEDP+E+ +NQ +V+ L F+ ALR+ L
Sbjct: 653 GKSFTTFSILKRIA-TPDKNTQTIEDPVEYEIPG----INQTQVNPQAGLTFARALRAFL 707
Query: 194 REDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKAMVR 253
R+DPDII+VGE+RD ET ++A AA TGHLV TLHT AA+ I R+ +E +
Sbjct: 708 RQDPDIIMVGEIRDSETAKIATEAALTGHLVIATLHTNDAAQAITRL------DEMGVEP 761
Query: 254 SMLSESLQSVISQTLIKKI 272
+S +L V+SQ L++++
Sbjct: 762 FNISAALIGVLSQRLVRRV 780
>1NLZ-A nrPDB
Length = 330
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 126 VLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRDTLGF 185
V+V G TGSGK+T + ++++++ K I++IED E V + K + +
Sbjct: 174 VIVCGGTGSGKTTYIKSIMEFI--PKEERIISIEDTEEIVFKHHKNYT--QLFFGGNITS 229
Query: 186 SEALRSALREDPDIILVGEMRDLETIRL--ALTAAETGHLVFGTLHTTSAAKTIDRVVDV 243
++ L+S LR PD I++GE+R E L + G L TLH S+ + R+ ++
Sbjct: 230 ADCLKSCLRMRPDRIILGELRSSEAYDFYNVLCSGHKGTLT--TLHAGSSEEAFIRLANM 287
Query: 244 FPAEEKAMVRSMLSESL 260
+ + R++ ESL
Sbjct: 288 --SSSNSAARNIKFESL 302
>2GZA-A nrPDB
Length = 361
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 66/161 (40%), Gaps = 8/161 (4%)
Query: 86 FNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLD 145
F R ++L ++E G F R + +++V G TGSGK+T + A++
Sbjct: 138 FKHVRPMSKSLTPFEQELLALKEAGDYMSFLRRAVQLERVIVVAGETGSGKTTLMKALMQ 197
Query: 146 YLNNTKYHHILTIEDPIEFV---HESKKCLVNQREVHRD---TLGFSEALRSALREDPDI 199
+ + ++TIED E H + L E + + + LRS LR P
Sbjct: 198 EIPFDQ--RLITIEDVPELFLPDHPNHVHLFYPSEAKEEENAPVTAATLLRSCLRMKPTR 255
Query: 200 ILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV 240
IL+ E+R E AA + H S T +R+
Sbjct: 256 ILLAELRGGEAYDFINVAASGHGGSITSCHAGSCELTFERL 296
>6BZS-A nrPDB
Length = 238
Score = 34.7 bits (78), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 121 VPRGLVL-VTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFV 165
VP+G +L V GP G+GKS+ L+A+L L +K ++IE + +V
Sbjct: 32 VPQGCLLAVVGPVGAGKSSLLSALLGEL--SKVEGFVSIEGAVAYV 75
>4W84-A nrPDB
Length = 340
Score = 33.9 bits (76), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 222 HLVFGTLHTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVA--A 279
+++ T H T+ D + EE A + L+E+ + + + + + R+A A
Sbjct: 97 YIILDTHHETNYWLKTDPNNEAALCEELAAIWKQLAEAFKDYDEKLMFEGMNEPRMAGSA 156
Query: 280 HEIMIGTPAIRNLIREDKVAQMYSAIQTGGSLGMQTLDMCLKG 322
E GTPA R LI A + + TGG+ + L +C G
Sbjct: 157 KEWSGGTPAERKLINAMNKAFIDAVRATGGNNADRVLIICTYG 199
>5YQS-A nrPDB
Length = 765
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 180 RDTLGFSEALRSALREDPDIILVGEM-RDLETIRLALTAAETGHLVFGTLHTTSA-AKTI 237
D GF+EA+ +A + D +++VG RD + + L A H+ +L A A I
Sbjct: 460 NDQSGFAEAVEAAKKSDVAVVVVGTWSRDQKELWAGLNATTGEHVDVNSLSLVGAQAPLI 519
Query: 238 DRVVD------VFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVA 278
++D V + K + LS + +++ Q + GG +A
Sbjct: 520 KAIIDTGVPTVVVLSSGKPITEPWLSNNTAALVQQFYPSEQGGNALA 566
>2GA8-A nrPDB
Length = 359
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 117 RVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVN 174
R+ D R V++ G GSGKS T+A L + N KYH L+ + V++ K +VN
Sbjct: 18 RIEDNYRVCVILVGSPGSGKS-TIAEELCQIINEKYHTFLSEHPNVIEVNDRLKPMVN 74
>6EF1-K nrPDB
Length = 276
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 18/102 (17%)
Query: 120 DVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVH 179
D PRG VL+ GP G+GK+ + A+ N+TK I + EFVH K L +
Sbjct: 52 DPPRG-VLLYGPPGTGKTMLVKAV---ANSTKAAFIRV--NGSEFVH---KYLGEGPRMV 102
Query: 180 RDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETG 221
RD R A P II + E+ + T R A+TG
Sbjct: 103 RDV------FRLARENAPSIIFIDEVDSIATKRF---DAQTG 135
>5ZME-A nrPDB
Length = 687
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 105 TMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTI 158
T++ LG+G + ++ D+ G +L T P G ++ +A ++ +L +Y H I
Sbjct: 453 TLDGLGLGVISDQLKDLQLGELLDTPPPGVDEAIAIAKVVQFLKAPEYSHFKRI 506
>2EBS-A nrPDB
Length = 789
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 14/116 (12%)
Query: 222 HLVFGTLHTTSAAKTIDRV-VDVFPA--------EEKAMVRSMLSESLQSVISQTLIKKI 272
HL++GT T A T+ RV D P+ EE A++ +S +++S I I
Sbjct: 409 HLMYGTGATIWATDTLSRVEKDWAPSWYLQIDGIEENAILSLRSPKSGAALLSG--IGNI 466
Query: 273 GGGR---VAAHEIMIGTPAIRNLIREDKVAQMYSAIQTGGSLGMQTLDMCLKGLVA 325
G + + + M G P NL D + + GS G + C +G A
Sbjct: 467 SGMKHDDLTKPQKMFGAPQFSNLDSIDAAGNFPNVVVRAGSSGHEYDSACARGAYA 522
>2BDT-A nrPDB
Length = 189
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 123 RGLVLVTGPTGSGKSTTLAAMLDYLNNTKY 152
+ L ++TGP G GKSTT + L+N+ Y
Sbjct: 2 KKLYIITGPAGVGKSTTCKRLAAQLDNSAY 31
>5WVI-K nrPDB
Length = 428
Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 18/102 (17%)
Query: 120 DVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVH 179
D PRG VL+ GP G+GK+ + A+ N+TK I + EFVH K L +
Sbjct: 204 DPPRG-VLLYGPPGTGKTMLVKAV---ANSTKAAFIRV--NGSEFVH---KYLGEGPRMV 254
Query: 180 RDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETG 221
RD R A P II + E+ + T R A+TG
Sbjct: 255 RDV------FRLARENAPSIIFIDEVDSIATKRF---DAQTG 287
>1SXJ-E nrPDB
Length = 354
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 111 MGEVFKRVSDVPRGL--VLVTGPTGSGKSTTLAAMLD 145
+ K +SD PR L +L+ GP G+GK T A+L+
Sbjct: 22 LTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLE 58
>6CUM-A nrPDB
Length = 315
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 93 GAVFRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAML 144
G R + + +E GEV + ++ VTGP G+GKSTT+ AM+
Sbjct: 38 GGSMRAVGRLLTLVESDRRGEVLAALGPATPRVIGVTGPPGAGKSTTVGAMV 89
>3E70-C nrPDB
Length = 328
Score = 31.2 bits (69), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 125 LVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRDTLG 184
+++ G GSGK+TT+A + ++L N + ++ D + + Q E H +G
Sbjct: 131 VIMFVGFNGSGKTTTIAKLANWLKNHGFSVVIAASDTF------RAGAIEQLEEHAKRIG 184
Query: 185 FSEALRSALREDP 197
+ ++ + DP
Sbjct: 185 V-KVIKHSYGADP 196
>1FP7-A nrPDB
Length = 557
Score = 30.8 bits (68), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 113 EVFKRVSDVPRG-LVLVTG----PTGSGKSTTLAAMLDYLNNTKYHHILTIEDP 161
+V++R+ D P G L+LVT P G GK+TT + D L ++ + +P
Sbjct: 46 DVYRRLKDKPDGKLILVTAITPTPAGEGKTTTSVGLTDALARLGKRVMVCLREP 99
>2ZBZ-A nrPDB
Length = 412
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 17/143 (11%)
Query: 163 EFVHESKKCLVNQREVH------RDTLGFSEALRSALREDPDIILVG-----EMRDLETI 211
EF ++ K LV + D G+ + L + + +P LVG ++ + E
Sbjct: 171 EFFQDASKRLVQSTDAQSALTARNDLAGYLDGLITQFQTEPGAGLVGALVADQLANGEID 230
Query: 212 RLALTAAETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKAMV----RSMLSESLQSVISQT 267
R L + L+ G H T+A+ T V+ + E+ RS++ +++ ++
Sbjct: 231 REELISTAMLLLIAG--HETTASMTSLSVITLLDHPEQYAALRADRSLVPGAVEELLRYL 288
Query: 268 LIKKIGGGRVAAHEIMIGTPAIR 290
I I GGRVA +I + IR
Sbjct: 289 AIADIAGGRVATADIEVEGQLIR 311
>2ZAO-A nrPDB
Length = 444
Score = 30.8 bits (68), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 121 VPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHR 180
P +L+ GP G+GKS A+ NN+ + I + + +++ ES+K + N ++ R
Sbjct: 165 TPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLAR 224
Query: 181 DTLGFSEALRSALREDPDIILVGEMRDL 208
+ P II + E+ L
Sbjct: 225 EN-------------KPSIIFIDEIDSL 239
>1XWI-A nrPDB
Length = 322
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 14/86 (16%)
Query: 123 RGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRDT 182
RG++L GP G+GKS A+ NN+ + I + + +++ ES+K + N ++ R+
Sbjct: 46 RGILLF-GPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLAREN 104
Query: 183 LGFSEALRSALREDPDIILVGEMRDL 208
P II + E+ L
Sbjct: 105 -------------KPSIIFIDEIDSL 117
>4XGU-A nrPDB
Length = 424
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 101 SKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLN---NTKYHHILT 157
S V + L V ++ +V R L+L+TGP G+GK++ + +L+ N KY +
Sbjct: 151 SYVAALARLSEKHVNTKIINVNR-LILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVM 209
Query: 158 IE 159
+E
Sbjct: 210 LE 211
>2P2N-A nrPDB
Length = 358
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 17 DLHLSAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDI 54
D S LPP++ +RR+N PP H + +++ I
Sbjct: 190 DAFASPNLPPLLEAGIHIRRLNTPPAPHGEGELIVHPI 227
>6GFL-A nrPDB
Length = 474
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 65/148 (43%), Gaps = 13/148 (8%)
Query: 149 NTKYHHILTIEDPIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGE--MR 206
N + H+ + I+D E + KK + +E RDT G + + ++R PD+ + E
Sbjct: 325 NARRHYRIIIDDAAEVARQMKKSMPLVKENRRDT-GDAYSFNWSMRIAPDLQMPFEPSHE 383
Query: 207 DLETIRLA------LTAAETGHLVFGTLHTTSAAKTIDRVVDVFPAE---EKAMVRSMLS 257
++ ++L + AA+ G + I + + P + +K ++R M
Sbjct: 384 NMANLKLYPDQPVEVLAADLRRAFSGIVAGNVKEVGIRAIEEFGPYKINGDKEIMRRM-D 442
Query: 258 ESLQSVISQTLIKKIGGGRVAAHEIMIG 285
+ LQ ++Q +K G + +EI G
Sbjct: 443 DLLQGFVAQHRMKLPGSAYIPCYEICTG 470
>2ZB2-A nrPDB
Length = 849
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 78 VARFRVNAFNQNRGAGAVFRTIPSKV 103
+ RF+ + F RGAG VF P +V
Sbjct: 311 IRRFKASKFGSTRGAGTVFDAFPDQV 336
>5U1D-B nrPDB
Length = 686
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 128 VTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQR--EVHRDTLGF 185
+ GP GSGKS T+AA+L L +L E PI + + C ++ + V ++ + F
Sbjct: 501 LVGPNGSGKS-TVAALLQNLYQPTGGQVLLDEKPIS---QYEHCYLHSQVVSVGQEPVLF 556
Query: 186 SEALRS 191
S ++R+
Sbjct: 557 SGSVRN 562
>1JI0-A nrPDB
Length = 240
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 11/98 (11%)
Query: 121 VPRG-LVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIED----PIEFVHESKKCLVNQ 175
VPRG +V + G G+GK+TTL+A+ + K I +D P ++ LV +
Sbjct: 29 VPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRMGIALVPE 88
Query: 176 -REVHRDTLGFSEALRSAL-REDPDIILVGEMRDLETI 211
R + + + + A R+D + G RDLE I
Sbjct: 89 GRRIFPELTVYENLMMGAYNRKDKE----GIKRDLEWI 122
>5VC7-A nrPDB
Length = 564
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 113 EVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCL 172
+VFKR+ P L+ GP G GK T LA + +N + I E ++V ES+K +
Sbjct: 310 DVFKRLGIRPSKGFLLYGPPGVGK-TLLAKAVATESNANFISIKGPEVLSKWVGESEKAI 368
Query: 173 VNQREVHR 180
RE+ +
Sbjct: 369 ---REIFK 373
>1IHU-A nrPDB
Length = 589
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 118 VSDVPR---GLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVN 174
V D+ R GL+++ G G GK+T AA+ L + + LT DP + + +N
Sbjct: 319 VDDIARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAAHLSMTLNGSLN 378
Query: 175 QREVHR 180
+V R
Sbjct: 379 NLQVSR 384
>5G4G-A nrPDB
Length = 721
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 113 EVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCL 172
+VFKR+ P L+ GP G GK T LA + +N + I E ++V ES+K +
Sbjct: 486 DVFKRLGIRPSKGFLLYGPPGVGK-TLLAKAVATESNANFISIKGPEVLSKWVGESEKAI 544
Query: 173 VNQREVHRDTLGFSEAL 189
RE+ + + A+
Sbjct: 545 ---REIFKKAKQVAPAI 558
>3B96-A nrPDB
Length = 587
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Query: 63 FEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSDVP 122
F F +T + G + ++ AF RG G + P K + ++ EVF VP
Sbjct: 191 FTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVP 250
Query: 123 RGLVLVTGPTGSGKSTTLAAMLDYLNNTKY 152
VL G GSG + LNN ++
Sbjct: 251 SENVL--GEVGSG----FKVAMHILNNGRF 274
>2WJV-A nrPDB
Length = 800
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 106 MEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYL 147
+ +L +V+ + + R L L+ GP G+GK+ T A ++ +L
Sbjct: 354 LPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHL 395
>1XA4-A nrPDB
Length = 437
Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 38 NLPPLEHKQVHALIYDIMNDKQRKDFEEFLET 69
N P L + +HAL +I D+ R+ F + +ET
Sbjct: 81 NYPQLSRRNLHALSLNIFKDEGREAFLKLMET 112
>6EJ5-A nrPDB
Length = 637
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 106 MEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYL 147
+ +L +V+ + + R L L+ GP G+GK+ T A ++ +L
Sbjct: 191 LPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHL 232
>6EPG-B nrPDB
Length = 401
Score = 27.7 bits (60), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 25/60 (41%)
Query: 85 AFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAML 144
AF V I + + EV KR + ++ VTG GSG ++T+ M+
Sbjct: 64 AFENKEDRATVNNAIHNSAAVLSSTQFDEVLKRDEPQKKEVIFVTGIPGSGATSTVKNMM 123
>1BRL-B nrPDB
Length = 324
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 153 HHILTIEDPIEFVHESKKCLVNQREVHRDTLGFSEALRSA 192
+H++T P+ E+ CL++Q R GFS+ +SA
Sbjct: 75 NHVITTHHPVRVAEEA--CLLDQMSEGRFAFGFSDCEKSA 112
>2V3C-C nrPDB
Length = 432
Score = 27.7 bits (60), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 111 MGEVFKRVSDVPR--GLVLVTGPTGSGKSTTLAAMLDYLNN 149
+GE K++ P+ ++L+ G GSGK+TT A + Y+
Sbjct: 85 LGEEAKKLELNPKKQNVILLVGIQGSGKTTTAAKLARYIQK 125
>4YMS-J nrPDB
Length = 240
Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 109 LGMGEVFKRVS-DVPRG-LVLVTGPTGSGKSTTLAAM 143
G EV K V+ V +G +V++ GP+GSGKST L +
Sbjct: 11 FGSLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCI 47
>3S1A-A nrPDB
Length = 525
Score = 27.7 bits (60), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 26/129 (20%)
Query: 99 IPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTI 158
+ S V+ ++E+ G FK ++L TG TG+GK+ ++ ++ K IL
Sbjct: 263 VSSGVVRLDEMCGGGFFKD------SIILATGATGTGKTLLVSRFVENACANKERAIL-- 314
Query: 159 EDPIEFVHESKKCLVNQREVHRDTLGFSEALR------------SALREDPDIILVGEMR 206
F +E + + R + + F E R SA ED I+ E+
Sbjct: 315 -----FAYEESRAQL-LRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHLQIIKSEIN 368
Query: 207 DLETIRLAL 215
D + R+A+
Sbjct: 369 DFKPARIAI 377
>6HUF-A nrPDB
Length = 182
Score = 27.7 bits (60), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 127 LVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQ----------- 175
L G +G GK++ L D N+K+ + I+ + ++ + K + Q
Sbjct: 13 LALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKLQLWDTAGLERFR 72
Query: 176 ---REVHRDTLGF-------------------SEALRSALREDPDIILVGEMRDLETIRL 213
RD +GF S+ A E+PDI+L G DLE R+
Sbjct: 73 SLTTAFFRDAMGFLLLFDLTNEESFLNVRNWISQLKTHAYSENPDIVLCGNKSDLEDERV 132
Query: 214 ALTAAETGHL 223
+ AAE L
Sbjct: 133 -VAAAEARQL 141
>4AYX-A nrPDB
Length = 595
Score = 27.3 bits (59), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 114 VFKRVS-DVPRGLVL-VTGPTGSGKSTTLAAML 144
+F+ S +P G V + GP+GSGKST L+ +L
Sbjct: 359 IFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLL 391
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
2EWW-A nrPDB 481 e-136
3JVU-A nrPDB 473 e-134
5ZFQ-A nrPDB 461 e-130
5FL3-A nrPDB 434 e-122
2EYU-A nrPDB 364 e-101
5ZFR-A nrPDB 328 2e-90
5TSG-B nrPDB 326 8e-90
3JC8-Ba nrPDB 313 7e-86
4KSS-A nrPDB 304 4e-83
4PHT-A nrPDB 297 3e-81
1P9R-A nrPDB 297 5e-81
6F8L-G nrPDB 260 6e-70
1NLZ-A nrPDB 150 8e-37
Sequences not found previously or not previously below threshold:
2GZA-A nrPDB 80 2e-15
5ZLR-A nrPDB 36 0.026
4YEG-A nrPDB 35 0.032
5L3S-B nrPDB 35 0.034
6E11-1 nrPDB 34 0.074
5U1D-B nrPDB 34 0.081
6EMW-B nrPDB 34 0.10
5VC7-A nrPDB 34 0.11
6MAT-A nrPDB 34 0.11
6EM8-A nrPDB 34 0.14
5G4G-A nrPDB 34 0.14
3E70-C nrPDB 34 0.14
6BZS-A nrPDB 33 0.18
5FLX-Q nrPDB 33 0.20
6D90-RR nrPDB 33 0.20
3S1A-A nrPDB 33 0.20
2IXE-A nrPDB 33 0.21
2XZL-A nrPDB 33 0.25
4F4J-A nrPDB 32 0.27
1HTW-A nrPDB 32 0.28
1FP7-A nrPDB 32 0.32
4LJ8-A nrPDB 32 0.32
3MCA-A nrPDB 32 0.51
6ED3-A nrPDB 32 0.52
1SXJ-E nrPDB 32 0.54
2PX0-A nrPDB 31 0.64
3H4M-A nrPDB 31 0.71
3WHK-A nrPDB 31 0.83
4ZLK-A nrPDB 31 0.84
3PXI-A nrPDB 31 0.88
1IHU-A nrPDB 31 0.88
2R65-A nrPDB 31 0.94
6EF1-K nrPDB 30 0.98
2ZAO-A nrPDB 30 1.0
1QVR-A nrPDB 30 1.0
5WVI-K nrPDB 30 1.1
3TAU-A nrPDB 30 1.1
4MYH-A nrPDB 30 1.1
5B3F-A nrPDB 30 1.1
1MV5-A nrPDB 30 1.1
5D4W-A nrPDB 30 1.2
3J3U-A nrPDB 30 1.3
1LVG-A nrPDB 30 1.3
1XWI-A nrPDB 30 1.3
2OG2-A nrPDB 30 1.3
4HI0-E nrPDB 30 1.4
6F4A-B nrPDB 30 1.4
2CE7-A nrPDB 30 1.4
5OFO-C nrPDB 30 1.5
5L3R-B nrPDB 30 1.5
4CIU-A nrPDB 30 1.5
5U1D-A nrPDB 30 1.5
6FA9-A nrPDB 30 1.7
6CY1-A nrPDB 30 1.7
1SXJ-C nrPDB 30 1.7
2V3C-C nrPDB 30 1.8
5Z6Q-A nrPDB 30 1.8
5E7P-A nrPDB 30 1.8
6CUM-A nrPDB 30 1.8
5EQT-A nrPDB 30 1.9
3UIE-A nrPDB 30 1.9
4V6W-AQ nrPDB 30 1.9
4A2W-A nrPDB 30 2.0
6MFU-A nrPDB 30 2.0
3CF0-A nrPDB 30 2.0
3NZP-A nrPDB 30 2.1
5NJ3-A nrPDB 30 2.1
2IUU-A nrPDB 30 2.2
2IUT-A nrPDB 29 2.3
6D00-1 nrPDB 29 2.3
1ODF-A nrPDB 29 2.3
5C18-A nrPDB 29 2.3
2WJV-A nrPDB 29 2.4
4Q7L-A nrPDB 29 2.4
4A2Q-A nrPDB 29 2.4
6MCK-A nrPDB 29 2.5
6EJ5-A nrPDB 29 2.5
6HIZ-Cg nrPDB 29 2.5
3GP8-A nrPDB 29 2.7
6QUZ-B nrPDB 29 2.7
3DO6-A nrPDB 29 2.8
5XXU-Q nrPDB 29 2.9
1G6H-A nrPDB 29 2.9
6FVU-L nrPDB 29 3.0
4A36-A nrPDB 29 3.0
1A2O-A nrPDB 29 3.0
1Z6G-A nrPDB 29 3.2
5WVI-L nrPDB 29 3.4
5ZME-A nrPDB 29 3.5
3SI7-A nrPDB 29 3.6
6AP1-A nrPDB 29 3.6
2UVQ-A nrPDB 29 3.6
2IUS-A nrPDB 29 3.6
6EF0-L nrPDB 29 3.7
1JJ7-A nrPDB 29 3.8
6B5C-A nrPDB 29 3.9
2X8A-A nrPDB 29 4.2
6N9A-E nrPDB 29 4.3
5XMK-A nrPDB 29 4.3
4XGC-D nrPDB 29 4.3
3EIH-A nrPDB 29 4.4
5ZQM-A nrPDB 29 4.6
2NMV-A nrPDB 29 4.7
2MYS-A nrPDB 29 4.7
1W49-A nrPDB 29 4.8
6MJP-A nrPDB 28 5.1
4O0M-A nrPDB 28 5.1
4UPB-C nrPDB 28 5.1
1JI0-A nrPDB 28 5.4
5FHF-A nrPDB 28 5.6
1R6B-X nrPDB 28 5.7
5VHF-B nrPDB 28 6.9
3QTP-A nrPDB 28 7.0
6AYB-A nrPDB 28 7.3
6MSK-B nrPDB 28 7.4
5VFP-B nrPDB 28 7.5
5UBU-A nrPDB 28 7.5
5VHO-B nrPDB 28 7.7
6EPG-B nrPDB 28 7.7
5XDR-A nrPDB 27 8.3
6C2V-A nrPDB 27 8.5
6ID1-V nrPDB 27 9.0
>2EWW-A nrPDB
Length = 372
Score = 481 bits (1238), Expect = e-136, Method: Composition-based stats.
Identities = 176/346 (50%), Positives = 243/346 (70%), Gaps = 2/346 (0%)
Query: 1 MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRI-NLPPLEHKQVHALIYDIMNDKQ 59
+ I E++ + + GASD+HL+AG PP +R+DG ++ + + P L + L Y +M++K
Sbjct: 13 LKILEIIKEAIELGASDIHLTAGAPPAVRIDGYIKFLKDFPRLTPEDTQKLAYSVMSEKH 72
Query: 60 RKDFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVS 119
R+ EE + DFSF V GV RFR N F Q A R++P+++ ++LG+ + +
Sbjct: 73 RQKLEENGQVDFSFGVRGVGRFRANVFYQRGSVAAALRSLPAEIPEFKKLGLPDKVLELC 132
Query: 120 DVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVH 179
GL+LVTGPTGSGKSTT+A+M+DY+N TK +HI+TIEDPIE+V + KK +VNQREV
Sbjct: 133 HRKMGLILVTGPTGSGKSTTIASMIDYINQTKSYHIITIEDPIEYVFKHKKSIVNQREVG 192
Query: 180 RDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDR 239
DT F++ALR+ALREDPD+I VGEMRDLET+ AL AAETGHLVFGTLHT +A TI R
Sbjct: 193 EDTKSFADALRAALREDPDVIFVGEMRDLETVETALRAAETGHLVFGTLHTNTAIDTIHR 252
Query: 240 VVDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIMIGTPAIRNLIREDKVA 299
+VD+FP ++ VR +LS LQ +ISQ L+ KIGGGRV A+E++I AIRNLIRE+K+
Sbjct: 253 IVDIFPLNQQEQVRIVLSFILQGIISQRLLPKIGGGRVLAYELLIPNTAIRNLIRENKLQ 312
Query: 300 QMYSAIQTG-GSLGMQTLDMCLKGLVAKGLISRENAREKAKIPENF 344
Q+YS +Q+G GMQT++ L L +GLI+ E+A E + P+
Sbjct: 313 QVYSLMQSGQAETGMQTMNQTLYKLYKQGLITLEDAMEASPDPKEL 358
>3JVU-A nrPDB
Length = 356
Score = 473 bits (1216), Expect = e-134, Method: Composition-based stats.
Identities = 344/344 (100%), Positives = 344/344 (100%)
Query: 1 MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQR 60
MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQR
Sbjct: 1 MDITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQR 60
Query: 61 KDFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSD 120
KDFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSD
Sbjct: 61 KDFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSD 120
Query: 121 VPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHR 180
VPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHR
Sbjct: 121 VPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHR 180
Query: 181 DTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV 240
DTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
Sbjct: 181 DTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV 240
Query: 241 VDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIMIGTPAIRNLIREDKVAQ 300
VDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIMIGTPAIRNLIREDKVAQ
Sbjct: 241 VDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIMIGTPAIRNLIREDKVAQ 300
Query: 301 MYSAIQTGGSLGMQTLDMCLKGLVAKGLISRENAREKAKIPENF 344
MYSAIQTGGSLGMQTLDMCLKGLVAKGLISRENAREKAKIPENF
Sbjct: 301 MYSAIQTGGSLGMQTLDMCLKGLVAKGLISRENAREKAKIPENF 344
>5ZFQ-A nrPDB
Length = 390
Score = 461 bits (1185), Expect = e-130, Method: Composition-based stats.
Identities = 176/345 (51%), Positives = 234/345 (67%), Gaps = 2/345 (0%)
Query: 2 DITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQRK 61
++ +LL +G SDLH++ PP IRVDG + + +PPL L Y I+ ++Q+
Sbjct: 28 NMHQLLTELVNRGGSDLHITTNSPPQIRVDGQLIPLEMPPLNAVDTKQLCYSILTEQQKH 87
Query: 62 DFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSDV 121
FEE E D SF + G++RFR N F Q VFR IP K+LT EELG+ V K +++
Sbjct: 88 KFEEANELDLSFGIKGLSRFRGNVFIQRGAVAGVFRVIPYKILTFEELGLPVVVKELAEK 147
Query: 122 PRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRD 181
PRGL+LVTGPTGSGKSTTLAA++D +N ++ HI+TIEDPIE++H K C+VNQREV D
Sbjct: 148 PRGLILVTGPTGSGKSTTLAAIIDKINTERHDHIVTIEDPIEYLHPHKSCVVNQREVGAD 207
Query: 182 TLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRVV 241
T F AL+ LR+DPD++LVGE+RDLETI ALT AETGHL TLHT SA +TI+R+V
Sbjct: 208 TKSFKNALKYILRQDPDVVLVGELRDLETIEAALTLAETGHLCLATLHTNSAVQTINRIV 267
Query: 242 DVFPAEEKAMVRSMLSESLQSVISQTLIKKIGG-GRVAAHEIMIGTPAIRNLIREDKVAQ 300
DVFP ++ VR+ LS L+ V+SQTL+ + G GRV A E+M+ PAIRNLIREDK+ Q
Sbjct: 268 DVFPPYQQPQVRAQLSFVLEGVMSQTLLPNVSGKGRVLALEVMVPNPAIRNLIREDKIHQ 327
Query: 301 MYSAIQTGGS-LGMQTLDMCLKGLVAKGLISRENAREKAKIPENF 344
+YS +Q G GMQT++ L L+ K IS + A ++ P+
Sbjct: 328 IYSQMQVGQEKFGMQTMNQSLFSLLQKRRISLDVAMARSSDPDEL 372
>5FL3-A nrPDB
Length = 368
Score = 434 bits (1115), Expect = e-122, Method: Composition-based stats.
Identities = 163/346 (47%), Positives = 221/346 (63%), Gaps = 3/346 (0%)
Query: 2 DITELLAFSAKQGASDLHLSAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQRK 61
+ E+L + ASD+HL AG PP +R+DG +R PL K+V A+ ++ +Q +
Sbjct: 11 SLVEMLKAMVQARASDIHLQAGAPPTVRIDGKLRPFGNRPLTPKEVEAIARALLTPEQLE 70
Query: 62 DFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMG-EVFKRVSD 120
+ E E DF++ +PGVARFR N Q G V R + + + E LG+ EV + ++
Sbjct: 71 ELEYRKEMDFAYTIPGVARFRCNLLRQRGSFGLVMRVVSEVIPSFEALGLPREVMESLAA 130
Query: 121 VPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHR 180
RGL+LVTGPTGSGKSTTLAA++D++N +I+TIEDPIEF+H+ KK LV QREV
Sbjct: 131 KERGLILVTGPTGSGKSTTLAALIDHINLHYAKNIITIEDPIEFLHKHKKSLVVQREVGL 190
Query: 181 DTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV 240
DT F L+ ALR+DPD+I+VGEMRD ET+ AL AA+TGHLV TLHT A +TI+R+
Sbjct: 191 DTDSFYTGLKYALRQDPDVIMVGEMRDRETVEAALMAAQTGHLVLSTLHTLDAWRTINRI 250
Query: 241 VDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGG-GRVAAHEIMIGTPAIRNLIR-EDKV 298
+D FP E VR +L+ESL ++SQ L+ K G GRV A EI+I TP +R L++ E+K
Sbjct: 251 IDFFPLHEHRQVRVLLAESLLGILSQRLLPKADGQGRVLALEILIATPYVRELLKDEEKT 310
Query: 299 AQMYSAIQTGGSLGMQTLDMCLKGLVAKGLISRENAREKAKIPENF 344
Q+ A+ G GM+T D L L +GLIS E+A A P F
Sbjct: 311 PQIKEAMMEGSLYGMRTFDQHLVELYTEGLISLEDALSAATSPHEF 356
>2EYU-A nrPDB
Length = 261
Score = 364 bits (934), Expect = e-101, Method: Composition-based stats.
Identities = 136/247 (55%), Positives = 183/247 (74%), Gaps = 1/247 (0%)
Query: 99 IPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTI 158
+P+++ ++LG+ + + GL+LVTGPTGSGKSTT+A+M+DY+N TK +HI+TI
Sbjct: 1 MPAEIPEFKKLGLPDKVLELCHRKMGLILVTGPTGSGKSTTIASMIDYINQTKSYHIITI 60
Query: 159 EDPIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAA 218
EDPIE+V + KK +VNQREV DT F++ALR+ALREDPD+I VGEMRDLET+ AL AA
Sbjct: 61 EDPIEYVFKHKKSIVNQREVGEDTKSFADALRAALREDPDVIFVGEMRDLETVETALRAA 120
Query: 219 ETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVA 278
ETGHLVFGTLHT +A TI R+VD+FP ++ VR +LS LQ +ISQ L+ KIGGGRV
Sbjct: 121 ETGHLVFGTLHTNTAIDTIHRIVDIFPLNQQEQVRIVLSFILQGIISQRLLPKIGGGRVL 180
Query: 279 AHEIMIGTPAIRNLIREDKVAQMYSAIQTG-GSLGMQTLDMCLKGLVAKGLISRENAREK 337
A+ ++I AIRNLIRE+K+ Q+YS +Q+G GMQT++ L L +GLI+ E+A E
Sbjct: 181 AYGLLIPNTAIRNLIRENKLQQVYSLMQSGQAETGMQTMNQTLYKLYKQGLITLEDAMEA 240
Query: 338 AKIPENF 344
+ P+
Sbjct: 241 SPDPKEL 247
>5ZFR-A nrPDB
Length = 582
Score = 328 bits (841), Expect = 2e-90, Method: Composition-based stats.
Identities = 98/296 (33%), Positives = 148/296 (50%), Gaps = 27/296 (9%)
Query: 3 ITELLAFSAKQGASDLHLSA---GLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQ 59
+ +L + K+ ASD+H+ R+DG + + PPL+ K IM D
Sbjct: 201 VNLILTDAIKKKASDIHIEPYERTFRVRYRIDGVLYEVMKPPLKLKNAITSRIKIMADLD 260
Query: 60 RKDFEEFLETDFSFEVPGVA----RFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMG--- 112
E L D ++ +RV+ G V R + L ++ +G
Sbjct: 261 IA--ERRLPQDGRIKIKMGGGQDMDYRVSVLPTLFGEKVVLRLLDKSNLQLDMTKLGYEP 318
Query: 113 ---EVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESK 169
FK P G+VLVTGPTGSGK+ +L + L LN T +I T EDP+EF
Sbjct: 319 TALSYFKEAIHKPFGMVLVTGPTGSGKTVSLYSALSELNKTT-ENISTAEDPVEFNFAG- 376
Query: 170 KCLVNQREVHRDT-LGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTL 228
+NQ ++H D L F+ ALRS LR+DPDII++GE+RD ET +A+ AA TGHLV TL
Sbjct: 377 ---INQVQMHEDIGLTFAAALRSFLRQDPDIIMIGEIRDFETAEIAIKAALTGHLVLSTL 433
Query: 229 HTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIMI 284
HT A TI+R++++ + +++ ++ + +Q L +++ A EI I
Sbjct: 434 HTNDAPATINRLLNM------GVEPFLVASAVNLITAQRLARRVCSECKAVEEIPI 483
>5TSG-B nrPDB
Length = 588
Score = 326 bits (836), Expect = 8e-90, Method: Composition-based stats.
Identities = 96/296 (32%), Positives = 147/296 (49%), Gaps = 27/296 (9%)
Query: 3 ITELLAFSAKQGASDLHLSA---GLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQ 59
+ +L + K+ ASD+H+ R+DG + + PPL+ K IM +
Sbjct: 207 VNLILTDAIKRKASDIHIEPYERSFRVRYRIDGVLYEVMKPPLKLKNAITSRIKIMAELD 266
Query: 60 RKDFEEFLETDFSFEVPGVA----RFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMG--- 112
E L D ++ +RV+ G V R + L ++ +G
Sbjct: 267 IA--ERRLPQDGRIKIKLGGGQDMDYRVSVLPTLFGEKVVLRLLDKSNLQLDMTKLGYEP 324
Query: 113 ---EVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESK 169
FK P G+VLVTGPTGSGK+ +L + L LN T +I T EDP+EF
Sbjct: 325 DALHYFKEAIHKPFGMVLVTGPTGSGKTVSLYSALGELNKTT-ENISTAEDPVEFNFAG- 382
Query: 170 KCLVNQREVHRDT-LGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTL 228
+NQ ++H D L F+ ALRS LR+DPDII++GE+RD ET +A+ AA TGHLV TL
Sbjct: 383 ---INQVQMHEDIGLNFAAALRSFLRQDPDIIMIGEIRDFETAEIAIKAALTGHLVLSTL 439
Query: 229 HTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIMI 284
HT A TI+R++++ + +++ ++ + +Q L +++ EI I
Sbjct: 440 HTNDAPATINRLLNM------GVEPFLVASAVNLITAQRLARRVCSECKQPEEIPI 489
>3JC8-Ba nrPDB
Length = 566
Score = 313 bits (802), Expect = 7e-86, Method: Composition-based stats.
Identities = 95/293 (32%), Positives = 144/293 (49%), Gaps = 27/293 (9%)
Query: 3 ITELLAFSAKQGASDLHLSA---GLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQ 59
+ +L + K+ ASD+H+ R+DG + + PP++ + IM
Sbjct: 183 VNLILMDAIKKRASDIHVEPYEKDFRVRFRIDGVMYEVMRPPMKLRNAITSRLKIMASLD 242
Query: 60 RKDFEEFLETDFSFEVPGVA----RFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMG--- 112
E L D ++ FRV+ G V R + L ++ +G
Sbjct: 243 IS--ERRLPQDGRIKIKMGGGKEMDFRVSVCPTLFGEKVVMRLLDKSNLQLDMTKLGFDA 300
Query: 113 ---EVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESK 169
FK D P G+VLVTGPTGSGK+TTL + L LN +I T EDP+EF
Sbjct: 301 QPLAWFKEAIDRPYGMVLVTGPTGSGKTTTLYSALSSLNGL-DTNICTAEDPVEFNFAG- 358
Query: 170 KCLVNQREVHRDT-LGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTL 228
+NQ ++H D L F+ ALRS LR+DPDII++GE+RD ET + + AA TGHLV TL
Sbjct: 359 ---INQVQMHDDIGLNFAAALRSFLRQDPDIIMIGEIRDFETAEIGVKAALTGHLVLSTL 415
Query: 229 HTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHE 281
HT A T+ R++++ + +++ SL +++Q L +++ E
Sbjct: 416 HTNDAPGTVSRLLNM------GIEPFLVTASLNLILAQRLARRLCPACKKPAE 462
>4KSS-A nrPDB
Length = 581
Score = 304 bits (778), Expect = 4e-83, Method: Composition-based stats.
Identities = 100/292 (34%), Positives = 155/292 (53%), Gaps = 26/292 (8%)
Query: 3 ITELLAFSAKQGASDLHLSA---GLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQ 59
I +L + K+GASD+H+ L RVDG +R + P + + +M
Sbjct: 29 INAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLD 88
Query: 60 RKDFEEFLETDF--SFEVPGVA-RFRVNAFNQNRGAGAVFRTIPSKV--LTMEELGMG-- 112
E+ + D S + G A RV+ + G V R + L + LGM
Sbjct: 89 IA--EKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAH 146
Query: 113 --EVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKK 170
+ F+R+ P G++LVTGPTGSGKSTTL A L LN++ +ILT+EDPIEF +
Sbjct: 147 NHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSS-ERNILTVEDPIEFDIDG-- 203
Query: 171 CLVNQREVHR-DTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLH 229
+ Q +V+ + F+ LR+ LR+DPD+++VGE+RDLET ++A+ A+ TGHLV TLH
Sbjct: 204 --IGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLH 261
Query: 230 TTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHE 281
T +A + R+ D+ + ++S SL V++Q L++ + +E
Sbjct: 262 TNTAVGAVTRLRDM------GIEPFLISSSLLGVLAQRLVRTLCPDCKEPYE 307
>4PHT-A nrPDB
Length = 500
Score = 297 bits (761), Expect = 3e-81, Method: Composition-based stats.
Identities = 101/292 (34%), Positives = 153/292 (52%), Gaps = 26/292 (8%)
Query: 3 ITELLAFSAKQGASDLHLSAG---LPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQ 59
I +L + K+GASD+H+ L RVDG +R + P + + +M
Sbjct: 124 INAMLGEAIKEGASDIHIETFEKILSIRFRVDGVLRDVLSPSRKLAPLLVSRVKVMAKLD 183
Query: 60 RKDFEEFLETDF--SFEVPGVA-RFRVNAFNQNRGAGAVFRTIPSKV--LTMEELGMGEV 114
E+ + D S + G A RV+ + G V R + L + LGM V
Sbjct: 184 IA--EKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTPV 241
Query: 115 ----FKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKK 170
F+ + P G++LVTGPTGSGKSTTL A L LN+ +ILT+EDPIEF +
Sbjct: 242 NHDNFRHLISRPHGIILVTGPTGSGKSTTLYAGLQELNSN-ERNILTVEDPIEFDIDG-- 298
Query: 171 CLVNQREVHR-DTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLH 229
+ Q +V+ + F+ LR+ LR+DPD+++VGE+RDLET ++A+ A+ TGHLV TLH
Sbjct: 299 --IGQTQVNPKVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLH 356
Query: 230 TTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHE 281
T +A I R+ D+ + ++S SL V++Q L++ + +E
Sbjct: 357 TNTAVGAITRLRDM------GIEPFLISSSLLGVLAQRLVRTLCQDCKEPYE 402
>1P9R-A nrPDB
Length = 418
Score = 297 bits (760), Expect = 5e-81, Method: Composition-based stats.
Identities = 100/292 (34%), Positives = 155/292 (53%), Gaps = 26/292 (8%)
Query: 3 ITELLAFSAKQGASDLHLSA---GLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQ 59
I +L + K+GASD+H+ L RVDG +R + P + + +M
Sbjct: 37 INAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLD 96
Query: 60 RKDFEEFLETDF--SFEVPGVA-RFRVNAFNQNRGAGAVFRTIPSKV--LTMEELGMG-- 112
E+ + D S + G A RV+ + G V R + L + LGM
Sbjct: 97 IA--EKRVPQDGRISLRIGGRAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTAH 154
Query: 113 --EVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKK 170
+ F+R+ P G++LVTGPTGSGKSTTL A L LN++ +ILT+EDPIEF +
Sbjct: 155 NHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSS-ERNILTVEDPIEFDIDG-- 211
Query: 171 CLVNQREVHR-DTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLH 229
+ Q +V+ + F+ LR+ LR+DPD+++VGE+RDLET ++A+ A+ TGHLV TLH
Sbjct: 212 --IGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLH 269
Query: 230 TTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHE 281
T +A + R+ D+ + ++S SL V++Q L++ + +E
Sbjct: 270 TNTAVGAVTRLRDM------GIEPFLISSSLLGVLAQRLVRTLCPDCKEPYE 315
>6F8L-G nrPDB
Length = 913
Score = 260 bits (665), Expect = 6e-70, Method: Composition-based stats.
Identities = 94/289 (32%), Positives = 143/289 (49%), Gaps = 26/289 (8%)
Query: 3 ITELLAFSAKQGASDLHLSA---GLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQ 59
+ +++ + Q ASD+H+ + +R+DG +R + P + IM
Sbjct: 511 VKQVIREAFLQDASDIHIEPRQNDVQVRLRIDGALRPYSTLPKGALNAVISVVKIMGGLN 570
Query: 60 RKDFEEFLETDFSFEVPGVA---RFRVNAFNQNRGAGAVFRTIPS--KVLTMEELGMG-- 112
E+ L D A R++ G AV R + + +E+LG
Sbjct: 571 IA--EKRLPQDGRVRYREGAIDVDLRLSTLPTVYGEKAVMRLLKKASDIPEIEDLGFAPG 628
Query: 113 --EVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKK 170
E FK V P G+ L+TGPTGSGKS T ++L + T + TIEDP+E+
Sbjct: 629 VFERFKEVISKPYGIFLITGPTGSGKSFTTFSILKRIA-TPDKNTQTIEDPVEYEIPG-- 685
Query: 171 CLVNQREVHRDT-LGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLH 229
+NQ +V+ L F+ ALR+ LR+DPDII+VGE+RD ET ++A AA TGHLV TLH
Sbjct: 686 --INQTQVNPQAGLTFARALRAFLRQDPDIIMVGEIRDSETAKIATEAALTGHLVIATLH 743
Query: 230 TTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVA 278
T AA+ I R+ +E + +S +L V+SQ L++++
Sbjct: 744 TNDAAQAITRL------DEMGVEPFNISAALIGVLSQRLVRRVCEHCKV 786
>1NLZ-A nrPDB
Length = 330
Score = 150 bits (379), Expect = 8e-37, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Query: 126 VLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRDTLGF 185
V+V G TGSGK+T + ++++++ K I++IED E V + K + +
Sbjct: 174 VIVCGGTGSGKTTYIKSIMEFI--PKEERIISIEDTEEIVFKHHKNYT--QLFFGGNITS 229
Query: 186 SEALRSALREDPDIILVGEMRDLETIRL--ALTAAETGHLVFGTLHTTSAAKTIDRVVDV 243
++ L+S LR PD I++GE+R E L + G L TLH S+ + R+ ++
Sbjct: 230 ADCLKSCLRMRPDRIILGELRSSEAYDFYNVLCSGHKGTLT--TLHAGSSEEAFIRLANM 287
Query: 244 FPAEEKAMVRSMLSESLQ 261
+ + R++ ESL
Sbjct: 288 --SSSNSAARNIKFESLI 303
>2GZA-A nrPDB
Length = 361
Score = 79.8 bits (195), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 10/159 (6%)
Query: 99 IPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTI 158
++L ++E G F R + +++V G TGSGK+T + A++ + ++TI
Sbjct: 151 FEQELLALKEAGDYMSFLRRAVQLERVIVVAGETGSGKTTLMKALMQEI--PFDQRLITI 208
Query: 159 EDPIEFVHESKKCLVN------QREVHRDTLGFSEALRSALREDPDIILVGEMRDLETIR 212
ED E V+ +E + + LRS LR P IL+ E+R E
Sbjct: 209 EDVPELFLPDHPNHVHLFYPSEAKEEENAPVTAATLLRSCLRMKPTRILLAELRGGEAYD 268
Query: 213 LALTAAETGH-LVFGTLHTTSAAKTIDRVVDVFPAEEKA 250
+ A +GH + H S T +R+ + +
Sbjct: 269 F-INVAASGHGGSITSCHAGSCELTFERLALMVLQNRQG 306
>5ZLR-A nrPDB
Length = 380
Score = 35.9 bits (81), Expect = 0.026, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Query: 158 IEDPIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTA 217
I + +E + S + + LGF++AL+ R PD+++V + D A
Sbjct: 59 ITESVEMLLSSDTSSAVVKSMGVGLLGFADALK---RMQPDVLVV--LGDRFEALAVTQA 113
Query: 218 AETGHLVFGTLHTTS 232
A H+ LH
Sbjct: 114 ALIMHVPVAHLHGGE 128
>4YEG-A nrPDB
Length = 275
Score = 35.5 bits (80), Expect = 0.032, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 81 FRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTL 140
F N F L +E L + K + + L++ G +GK T+
Sbjct: 19 FLENIFPYKHKIPRNVYEKQKHYLQIELLKFQKWVKE--NNKKVLIIFEGRDAAGKGGTI 76
Query: 141 AAMLDYLNNTKYHHILTIEDPIE 163
M+++LN + ++ +E P E
Sbjct: 77 KRMMEHLN-PRGAKVIALEKPSE 98
>5L3S-B nrPDB
Length = 296
Score = 35.5 bits (80), Expect = 0.034, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Query: 92 AGAVFRTIPSKVLTM----EELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYL 147
V T+ + + ++ + E + P +++ G G GK+TT+A +++ L
Sbjct: 67 EEIVINTLKKSITEILTKNQKTDLIEKIRSSGKKPF-VIIFFGVNGVGKTTTIAKVVNML 125
Query: 148 NNTKYHHILTIEDP 161
I+ D
Sbjct: 126 KKNNLSTIIAASDT 139
>6E11-1 nrPDB
Length = 906
Score = 34.3 bits (77), Expect = 0.074, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Query: 120 DVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVH 179
+ P G L GPTG GK+ + L N+K +++ + + EF +
Sbjct: 628 EKPIGTFLFLGPTGVGKTELAKTLAIELFNSKD-NLIRV-NMSEFTEAHSVSKITGSPPG 685
Query: 180 RDTLGFSEALRSALREDPDIILV 202
S L A+RE P +++
Sbjct: 686 YVGFSDSGQLTEAVREKPHSVVL 708
>5U1D-B nrPDB
Length = 686
Score = 34.3 bits (77), Expect = 0.081, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 121 VPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHR 180
P + + GP GSGKST +AA+L L +L E PI +E V +
Sbjct: 494 RPGEVTALVGPNGSGKST-VAALLQNLYQPTGGQVLLDEKPIS-QYEHCYLHSQVVSVGQ 551
Query: 181 DTLGFSEALR 190
+ + FS ++R
Sbjct: 552 EPVLFSGSVR 561
>6EMW-B nrPDB
Length = 225
Score = 33.9 bits (76), Expect = 0.10, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 45/138 (32%), Gaps = 5/138 (3%)
Query: 120 DVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVH 179
P G + GPTG GK+ A+ + + I D EF+ + +
Sbjct: 48 KRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRV--DMSEFMEKHAVSRLVGAPPG 105
Query: 180 RDTLGFSEALRSALREDP-DIILVGEMRDL--ETIRLALTAAETGHLVFGTLHTTSAAKT 236
L +R P +IL E+ + + L + GHL T T
Sbjct: 106 YVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNT 165
Query: 237 IDRVVDVFPAEEKAMVRS 254
I + A+E R
Sbjct: 166 IIIMTSNVGAQELQDQRF 183
>5VC7-A nrPDB
Length = 564
Score = 33.9 bits (76), Expect = 0.11, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 17/163 (10%)
Query: 90 RGAGAVFRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNN 149
G V R I + + + L +VFKR+ P L+ GP G GK+ A+ N
Sbjct: 289 GGLEDVKREI-KETVELPLLK-PDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNA 346
Query: 150 TKYHHILTIEDPIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDLE 209
+ ++I+ P V + V E + A + P I+ + E+ +
Sbjct: 347 ----NFISIKGPE----------VLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIA 392
Query: 210 TIR-LALTAAETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKAM 251
R + T +V L + + ++ VV + +
Sbjct: 393 PRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNRPDI 435
Score = 27.8 bits (60), Expect = 8.2, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 16/98 (16%)
Query: 109 LGMGEVFKRV-SDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHE 167
L E+F+R+ P+G++L GP G+GK+ A + N + L+I P
Sbjct: 29 LKHPELFERLGITPPKGVILY-GPPGTGKTLIARA----VANESGANFLSINGPEIMSKY 83
Query: 168 SKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEM 205
+ RE+ + P II + E+
Sbjct: 84 YGQSEQKLREIFSKAEETA----------PSIIFIDEI 111
>6MAT-A nrPDB
Length = 813
Score = 33.9 bits (76), Expect = 0.11, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Query: 112 GEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKC 171
E+F RV P +L+ GP G GK+ A + N + ++I+ P +
Sbjct: 524 PELFTRVGIKPAAGILLWGPPGCGKTLVAKA----VANESKANFISIKGPELLNKYVGES 579
Query: 172 LVNQREVHRDTLGFSEALRSALRED 196
R++ + + + D
Sbjct: 580 ERAVRQLFSRAKSSAPCILFFDQMD 604
>6EM8-A nrPDB
Length = 818
Score = 33.6 bits (75), Expect = 0.14, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 45/138 (32%), Gaps = 5/138 (3%)
Query: 120 DVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVH 179
P G + GPTG GK+ A+ + + I D EF+ + +
Sbjct: 535 KRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRV--DMSEFMEKHAVSRLVGAPPG 592
Query: 180 RDTLGFSEALRSALREDP-DIILVGEMRDL--ETIRLALTAAETGHLVFGTLHTTSAAKT 236
L +R P +IL E+ + + L + GHL T T
Sbjct: 593 YVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNT 652
Query: 237 IDRVVDVFPAEEKAMVRS 254
I + A+E R
Sbjct: 653 IIIMTSNVGAQELQDQRF 670
>5G4G-A nrPDB
Length = 721
Score = 33.6 bits (75), Expect = 0.14, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 17/163 (10%)
Query: 90 RGAGAVFRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNN 149
G V R I + + + L +VFKR+ P L+ GP G GK+ A+ N
Sbjct: 465 GGLEDVKREI-KETVELPLLK-PDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNA 522
Query: 150 TKYHHILTIEDPIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDLE 209
+ ++I+ P V + V E + A + P I+ + E+ +
Sbjct: 523 ----NFISIKGPE----------VLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIA 568
Query: 210 TIR-LALTAAETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKAM 251
R + T +V L + + ++ VV + +
Sbjct: 569 PRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNRPDI 611
>3E70-C nrPDB
Length = 328
Score = 33.6 bits (75), Expect = 0.14, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 77/192 (40%), Gaps = 16/192 (8%)
Query: 32 GDVRRINLPPLEHKQVHA----LIYDIMNDKQRKDFEEFLETDFSFEVPGVARFRVNAFN 87
G + RI ++ K V L D++ + + L ++ G + R+
Sbjct: 37 GLLDRILTVEIKEKDVDKALDELEIDLLEADVALEVVDALREKIKQKLVGK-KVRIGTDK 95
Query: 88 QNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYL 147
AV + + T + + E ++ + P +++ G GSGK+TT+A + ++L
Sbjct: 96 GKIIEEAVKEAVSEILETSRRIDLIEEIRKA-EKPY-VIMFVGFNGSGKTTTIAKLANWL 153
Query: 148 NNTKYHHILTIEDP-----IEFVHESKKCL---VNQREVHRDTLGFS-EALRSALREDPD 198
N + ++ D IE + E K + V + D + +A++ A D
Sbjct: 154 KNHGFSVVIAASDTFRAGAIEQLEEHAKRIGVKVIKHSYGADPAAVAYDAIQHAKARGID 213
Query: 199 IILVGEMRDLET 210
++L+ ET
Sbjct: 214 VVLIDTAGRSET 225
>6BZS-A nrPDB
Length = 238
Score = 33.2 bits (74), Expect = 0.18, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 122 PRGLVL-VTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFV 165
P+G +L V GP G+GKS+ L+A+L L +K ++IE + +V
Sbjct: 33 PQGCLLAVVGPVGAGKSSLLSALLGEL--SKVEGFVSIEGAVAYV 75
>5FLX-Q nrPDB
Length = 146
Score = 33.2 bits (74), Expect = 0.20, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Query: 34 VRRINLPPLEHKQVHALIYDIMNDKQRKDFEEFLETDFSFEVPGVARF-RVNAFNQNRGA 92
+ ++N PLE + L Y ++ E F D V G ++ A Q+
Sbjct: 31 LIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISK 90
Query: 93 GAV 95
V
Sbjct: 91 ALV 93
>6D90-RR nrPDB
Length = 172
Score = 33.2 bits (74), Expect = 0.20, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Query: 34 VRRINLPPLEHKQVHALIYDIMNDKQRKDFEEFLETDFSFEVPGVARF-RVNAFNQNRGA 92
+ ++N PLE + L Y ++ E F D V G ++ A Q+
Sbjct: 57 LIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISK 116
Query: 93 GAV 95
V
Sbjct: 117 ALV 119
>3S1A-A nrPDB
Length = 525
Score = 32.8 bits (73), Expect = 0.20, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 75/187 (40%), Gaps = 20/187 (10%)
Query: 44 HKQVHALIYDIMNDKQRKDFEEFLETDFSFEVPG-----VARFRVNAFNQNRGAGAVFRT 98
++ +++ ++R+ E L+ + + G + +N F R+
Sbjct: 200 VSDNVVILRNVLEGERRRRTLEILKLRGTSHMKGEYPFTITDHGINIFP-LGAMRLTQRS 258
Query: 99 ----IPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHH 154
+ S V+ ++E+ G FK ++L TG TG+GK+ ++ ++ K
Sbjct: 259 SNVRVSSGVVRLDEMCGGGFFKD------SIILATGATGTGKTLLVSRFVENACANKERA 312
Query: 155 ILTI--EDPIEFVHESKKCLVNQREVHRDTLGFSEAL--RSALREDPDIILVGEMRDLET 210
IL E + + + ++ E+ R L SA ED I+ E+ D +
Sbjct: 313 ILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHLQIIKSEINDFKP 372
Query: 211 IRLALTA 217
R+A+ +
Sbjct: 373 ARIAIDS 379
>2IXE-A nrPDB
Length = 271
Score = 32.8 bits (73), Expect = 0.21, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 122 PRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRD 181
P + + GP GSGKST +AA+L L +L +P+ ++ V ++
Sbjct: 44 PGKVTALVGPNGSGKST-VAALLQNLYQPTGGKVLLDGEPL-VQYDHHYLHTQVAAVGQE 101
Query: 182 TLGFSEALR 190
L F + R
Sbjct: 102 PLLFGRSFR 110
>2XZL-A nrPDB
Length = 802
Score = 32.8 bits (73), Expect = 0.25, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 102 KVLTMEEL--GMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHIL 156
+ +L V P L L+ GP G+GK+ T A ++ +L+ IL
Sbjct: 354 SIPNFAQLNSSQSNAVSHVLQRP--LSLIQGPPGTGKTVTSATIVYHLSKIHKDRIL 408
>4F4J-A nrPDB
Length = 202
Score = 32.4 bits (72), Expect = 0.27, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 7/47 (14%)
Query: 100 PSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDY 146
+ T E L F+ P ++++GP+G+GKST L +
Sbjct: 1 DYDIPTTENL----YFQGSMSRP---IVISGPSGTGKSTLLKKLFAE 40
>1HTW-A nrPDB
Length = 158
Score = 32.4 bits (72), Expect = 0.28, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 26/82 (31%), Gaps = 5/82 (6%)
Query: 96 FRTIPSKVL-TMEELGMGEVFKRVSDVPRG----LVLVTGPTGSGKSTTLAAMLDYLNNT 150
++ + L G+ F + +V + G G+GK+T ML + +
Sbjct: 1 MESLTQYIPDEFSMLRFGKKFAEILLKLHTEKAIMVYLNGDLGAGKTTLTRGMLQGIGHQ 60
Query: 151 KYHHILTIEDPIEFVHESKKCL 172
T E+ K
Sbjct: 61 GNVKSPTYTLVEEYNIAGKMIY 82
>1FP7-A nrPDB
Length = 557
Score = 32.4 bits (72), Expect = 0.32, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 113 EVFKRVSDVPRG-LVLVTG----PTGSGKSTTLAAMLDYLNNTKYHHILTIEDP 161
+V++R+ D P G L+LVT P G GK+TT + D L ++ + +P
Sbjct: 46 DVYRRLKDKPDGKLILVTAITPTPAGEGKTTTSVGLTDALARLGKRVMVCLREP 99
>4LJ8-A nrPDB
Length = 339
Score = 32.4 bits (72), Expect = 0.32, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 43/124 (34%), Gaps = 5/124 (4%)
Query: 120 DVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVH 179
+ P G L GPTG GK+ + L +T+ I D E++ + +
Sbjct: 70 NRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIQI--DMTEYMEKHAVSRLIGAPPG 127
Query: 180 RDTLGFSEALRSALREDP-DIILVGEMRDL--ETIRLALTAAETGHLVFGTLHTTSAAKT 236
L A+R P +IL E+ + + L + G L T T
Sbjct: 128 YVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNT 187
Query: 237 IDRV 240
+ +
Sbjct: 188 VIIL 191
>3MCA-A nrPDB
Length = 592
Score = 31.6 bits (70), Expect = 0.51, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 99 IPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTI 158
I + T + + + E+F++ + P ++VTG SGKST L ++ L + +
Sbjct: 154 IKKQNPT-DLVSVPEIFEQSNPKPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKL 212
Query: 159 ED 160
+
Sbjct: 213 HN 214
>6ED3-A nrPDB
Length = 848
Score = 31.6 bits (70), Expect = 0.52, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 42/121 (34%), Gaps = 5/121 (4%)
Query: 120 DVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVH 179
+ P G + GPTG GK+ A+ D+L + D E+ + +
Sbjct: 597 NRPTGAFMFLGPTGVGKTELAKALADFL--FDDERAMVRIDMSEYGEKHTVARLIGAPPG 654
Query: 180 RDTLGFSEALRSALREDP-DIILVGEMRDL--ETIRLALTAAETGHLVFGTLHTTSAAKT 236
L A+R P ++L E+ + + L + G L G T T
Sbjct: 655 YVGYEAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNT 714
Query: 237 I 237
I
Sbjct: 715 I 715
>1SXJ-E nrPDB
Length = 354
Score = 31.6 bits (70), Expect = 0.54, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 111 MGEVFKRVSDVPRGL--VLVTGPTGSGKSTTLAAMLDYLNNTKYHHI 155
+ K +SD PR L +L+ GP G+GK T A+L+ + + +
Sbjct: 22 LTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRL 68
>2PX0-A nrPDB
Length = 296
Score = 31.2 bits (69), Expect = 0.64, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 107 EELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLA--AMLDYLNNTKYHHILTIE 159
+ L + ++ +++ G TG+GK+TTLA A + L K +T +
Sbjct: 91 DMLPSADKWQEPIHSKY--IVLFGSTGAGKTTTLAKLAAISMLEKHKKIAFITTD 143
>3H4M-A nrPDB
Length = 285
Score = 31.2 bits (69), Expect = 0.71, Method: Composition-based stats.
Identities = 43/207 (20%), Positives = 87/207 (42%), Gaps = 22/207 (10%)
Query: 109 LGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHES 168
L E+F++V P +L+ GP G+GK+ A+ N T ++ E +F+ E
Sbjct: 37 LKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFI-RVVGSELVKKFIGEG 95
Query: 169 KKCLVNQREVHRD---TLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVF 225
+ + ++ ++ ++ F + + + + D + G+ R+++ + L A G
Sbjct: 96 ASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGD-REVQRTLMQLLAEMDGFDAR 154
Query: 226 GTLHTTSA-------------AKTIDRVVDVFPAEEKAMVRSMLSESLQSVISQTL---- 268
G + A DR+++V +EK + + + + +++ +
Sbjct: 155 GDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEE 214
Query: 269 IKKIGGGRVAAHEIMIGTPAIRNLIRE 295
I K+ G V A I T A N IRE
Sbjct: 215 IAKMTEGCVGAELKAICTEAGMNAIRE 241
>3WHK-A nrPDB
Length = 270
Score = 30.9 bits (68), Expect = 0.83, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 109 LGMGEVFKRV-SDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNT 150
L E+F+ V D P+G VL+ GP G GK+ A+ +N T
Sbjct: 37 LKHPELFEEVGIDPPKG-VLLYGPPGCGKTLMAKAIAHEVNAT 78
>4ZLK-A nrPDB
Length = 839
Score = 30.9 bits (68), Expect = 0.84, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 53/143 (37%), Gaps = 11/143 (7%)
Query: 18 LHLSAGLPPMIRVD---GDVRRINLPPLEHKQVHALIYDIM-NDKQRKDFE-EFLETDFS 72
LHL G R+D G++ + P + + + + F+++
Sbjct: 88 LHLEEGKDLEYRLDPKTGELPHLRNPDILVGENDLTALSYLHEPAVLHNLRVRFIDSKLI 147
Query: 73 FEVPGVARFRVNAFNQN--RGAGAVFRTIPSKVLTMEELGMG---EVFKRVSDVPRGL-V 126
+ G+ +N + Q G + + M+ E +K+++ R +
Sbjct: 148 YTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSI 207
Query: 127 LVTGPTGSGKSTTLAAMLDYLNN 149
+V+G +G+GK+ + + Y
Sbjct: 208 IVSGESGAGKTVSAKYAMRYFAT 230
>3PXI-A nrPDB
Length = 758
Score = 30.9 bits (68), Expect = 0.88, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
Query: 120 DVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVH 179
P G + GPTG GK+ A+ + + + I D E++ + E
Sbjct: 518 KRPIGSFIFLGPTGVGKTELARALAESIFGDEESMIRI--DMSEYMEKHSTSGGQLTEKV 575
Query: 180 RDTLGFSEALRSALREDPDI 199
R L + + PD+
Sbjct: 576 RRKPYSVVLLDAIEKAHPDV 595
>1IHU-A nrPDB
Length = 589
Score = 30.9 bits (68), Expect = 0.88, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 111 MGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKK 170
+ + ++ GL+++ G G GK+T AA+ L + + LT DP + +
Sbjct: 315 LSALVDDIARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAAHLSMTLN 374
Query: 171 CLVNQREVHR 180
+N +V R
Sbjct: 375 GSLNNLQVSR 384
>2R65-A nrPDB
Length = 268
Score = 30.9 bits (68), Expect = 0.94, Method: Composition-based stats.
Identities = 41/260 (15%), Positives = 87/260 (33%), Gaps = 53/260 (20%)
Query: 106 MEELGMGEVFKRVSDV-PRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEF 164
++ L E + + P+G++LV GP G+GK+ A+ + F
Sbjct: 27 VDFLKYPERYANLGAKIPKGVLLV-GPPGTGKTLLAKAVAGEAHVP-------------F 72
Query: 165 VHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLV 224
+ + V + +A ++ P II + E+ + G +V
Sbjct: 73 FSMGGSSFI-EMFVGLGASRVRDLFETAKKQAPSIIFIDEI------DAIGKSRAAGGVV 125
Query: 225 FGTLHTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQ--SVIS-----------QTLIKK 271
G +T+++++ ++ + ++ Q L+ K
Sbjct: 126 SGN---DEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDK 182
Query: 272 IG-GGRVAAHEIMIGTPAIRNLIREDKVAQM--------------YSAIQTGGSLGMQTL 316
GRV ++ I + N + +VA++ +A+ G + +
Sbjct: 183 PDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVR 242
Query: 317 DMCLKGLVAKGLISRENARE 336
LK V +G+ E E
Sbjct: 243 QQHLKEAVERGIAGLEKKLE 262
>6EF1-K nrPDB
Length = 276
Score = 30.5 bits (67), Expect = 0.98, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 15/100 (15%)
Query: 119 SDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREV 178
D PRG VL+ GP G+GK+ + A+ N+TK I + EFVH+ +
Sbjct: 51 IDPPRG-VLLYGPPGTGKTMLVKAVA---NSTKAAFIRV--NGSEFVHKY---------L 95
Query: 179 HRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAA 218
+ R A P II + E+ + T R
Sbjct: 96 GEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTG 135
>2ZAO-A nrPDB
Length = 444
Score = 30.5 bits (67), Expect = 1.0, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 16/105 (15%)
Query: 107 EELGMGEVFKRVS---DVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIE 163
E + + F + P +L+ GP G+GKS A+ NN+ + I + + +
Sbjct: 148 EAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSK 207
Query: 164 FVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDL 208
++ ES+K + N ++ R+ P II + E+ L
Sbjct: 208 WLGESEKLVKNLFQLARENK-------------PSIIFIDEIDSL 239
>1QVR-A nrPDB
Length = 854
Score = 30.5 bits (67), Expect = 1.0, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 43/124 (34%), Gaps = 5/124 (4%)
Query: 120 DVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVH 179
+ P G L GPTG GK+ + L +T+ I D E++ + +
Sbjct: 585 NRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRI--DMTEYMEKHAVSRLIGAPPG 642
Query: 180 RDTLGFSEALRSALREDP-DIILVGEMRDL--ETIRLALTAAETGHLVFGTLHTTSAAKT 236
L A+R P +IL E+ + + L + G L T T
Sbjct: 643 YVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNT 702
Query: 237 IDRV 240
+ +
Sbjct: 703 VIIL 706
>5WVI-K nrPDB
Length = 428
Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 15/100 (15%)
Query: 119 SDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREV 178
D PRG VL+ GP G+GK+ + A+ N+TK I + EFVH+ +
Sbjct: 203 IDPPRG-VLLYGPPGTGKTMLVKAVA---NSTKAAFIRV--NGSEFVHKY---------L 247
Query: 179 HRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAA 218
+ R A P II + E+ + T R
Sbjct: 248 GEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTG 287
>3TAU-A nrPDB
Length = 208
Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 122 PRGLVLV-TGPTGSGKSTTLAAMLDYLNNTKYHHI-LTIEDPIEFVHESKKCLVNQREVH 179
RGL++V +GP+G GK T A+ + + I +T P E + REV
Sbjct: 6 ERGLLIVLSGPSGVGKGTVREAVFKDPETSFDYSISMTTRLPREGEQDGVDYYFRSREVF 65
Query: 180 RDTLGFSEALRSA 192
+ + L A
Sbjct: 66 EQAIKDGKMLEYA 78
>4MYH-A nrPDB
Length = 598
Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 12/105 (11%)
Query: 80 RFRVNAFNQNRGAGAVFRTIPSKVL---TMEELGMGEVFKRVSDVPRGLVL-------VT 129
+ R N + +P V T E + G R + +
Sbjct: 314 KLRKNEVKIKNAERPLM--LPENVPYDITFENVTFGYHPDRKILKNASFTIPAGWKTAIV 371
Query: 130 GPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVN 174
G +GSGKST L + + + ++ D E+ ++ + ++
Sbjct: 372 GSSGSGKSTILKLVFRFYDPESGRILINGRDIKEYDIDALRKVIG 416
>5B3F-A nrPDB
Length = 343
Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 103 VLTMEELGMGEVFKRVS-DVPR-GLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIED 160
V + E F+ V P L+ V G +GSGKST A+ D + + +T++D
Sbjct: 15 VPRGSHMSQPENFREVIRHSPLVYLIGVAGDSGSGKSTFTRAISD-IFGEELVSSITVDD 73
>1MV5-A nrPDB
Length = 243
Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 120 DVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIE 163
P ++ GP+G GKST + ++L+ I PI+
Sbjct: 25 AQPNSIIAFAGPSGGGKST-IFSLLERFYQPTAGEITIDGQPID 67
>5D4W-A nrPDB
Length = 926
Score = 30.5 bits (67), Expect = 1.2, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 32/95 (33%), Gaps = 7/95 (7%)
Query: 126 VLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRDTLGF 185
L GP+G+GK+ A+ ++L + I D E+ +
Sbjct: 630 FLFCGPSGTGKTLLTKALAEFLFDDPKSMIRF--DMSEYQERHSLSRMIGAPPGYVGHDA 687
Query: 186 SEALRSALREDPDIILVGEMRDLETIRLALTAAET 220
L ALR P IL+ + + A T
Sbjct: 688 GGQLTEALRRRPFSILL-----FDAVEKAAKEVLT 717
>3J3U-A nrPDB
Length = 810
Score = 30.5 bits (67), Expect = 1.3, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 5/121 (4%)
Query: 120 DVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVH 179
P G + GPTG GK+ A+ + + + I D E++ + +
Sbjct: 535 KRPIGSFIFLGPTGVGKTELARALAESIFGDEESMIRI--DMSEYMEKHSTSRLVGSPPG 592
Query: 180 RDTLGFSEALRSALREDP-DIILVGEMRDL--ETIRLALTAAETGHLVFGTLHTTSAAKT 236
L +R P ++L+ + + + L E G L T T
Sbjct: 593 YVGYDEGGQLTEKVRRKPYSVVLLDAIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNT 652
Query: 237 I 237
I
Sbjct: 653 I 653
>1LVG-A nrPDB
Length = 198
Score = 30.5 bits (67), Expect = 1.3, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 69/215 (32%), Gaps = 44/215 (20%)
Query: 126 VLVTGPTGSGKSTTLAAMLDYLNNTKYHHIL-TIEDPIEFVHESKKCLVNQREVHRDTLG 184
V+++GP+G+GKST L + ++ + T +P + K RE+ +
Sbjct: 7 VVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQ---- 62
Query: 185 FSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV---- 240
RD+ A +G+L + A + ++R+
Sbjct: 63 ---------------------RDIAAGDFIEHAEFSGNLYGTSKEAVRAVQAMNRICVLD 101
Query: 241 ------VDVFPAEEKAMVRSMLSESLQSVISQTL-IKKIGGGRVAAHEIMIGTPAIRNLI 293
+ + + + SL V+ Q L ++ A + A R +
Sbjct: 102 VDLQGVRSIKKTDLCPIYIFVQPPSLD-VLEQRLRLRNTETEESLAKRL----AAARTDM 156
Query: 294 REDKVAQMYSAIQTGGSL--GMQTLDMCLKGLVAK 326
K ++ + L TL L + K
Sbjct: 157 ESSKEPGLFDLVIINDDLDKAYATLKQALSEEIKK 191
>1XWI-A nrPDB
Length = 322
Score = 30.1 bits (66), Expect = 1.3, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 16/105 (15%)
Query: 107 EELGMGEVFKRVS---DVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIE 163
E + + F + P +L+ GP G+GKS A+ NN+ + I + + +
Sbjct: 26 EAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSK 85
Query: 164 FVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDL 208
++ ES+K + N ++ R+ P II + E+ L
Sbjct: 86 WLGESEKLVKNLFQLARENK-------------PSIIFIDEIDSL 117
>2OG2-A nrPDB
Length = 359
Score = 30.1 bits (66), Expect = 1.3, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 4/110 (3%)
Query: 56 NDKQRKDFEEFLET-DF--SFEVPGVARFRVNAFNQNRGAGAVFR-TIPSKVLTMEELGM 111
D+ + EE L DF V V R R + + +G+ + + VL M
Sbjct: 86 TDRVLDELEEALLVSDFGPKITVRIVERLREDIMSGKLKSGSEIKDALKESVLEMLAKKN 145
Query: 112 GEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDP 161
+ ++ ++++ G G GK+T+L + L N ++ D
Sbjct: 146 SKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDT 195
>4HI0-E nrPDB
Length = 199
Score = 30.1 bits (66), Expect = 1.4, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 128 VTGPTGSGKSTTLAAMLDYLNNTKYHHILT 157
V GP GSGK+ + A+ +++ ++T
Sbjct: 6 VCGPVGSGKTALIEALTRHMSKDYDMAVIT 35
>6F4A-B nrPDB
Length = 644
Score = 30.1 bits (66), Expect = 1.4, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 12/119 (10%)
Query: 100 PSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYH---HIL 156
V +++ E F + R +++ GPT SGK+ L + Y +L
Sbjct: 136 DDSVHSVDFSNPAEWFPEARKIRRHIIMHVGPTNSGKTFRSLQKLKAADRGYYAGPLRLL 195
Query: 157 TIEDPIEFVHESKKC-LVNQREV--------HRDTLGFSEALRSALREDPDIILVGEMR 206
E +F HE+ +C L+ EV + L L ++ D++++ E++
Sbjct: 196 AREVYEKFKHENVRCNLLTGEEVIKDLDEMGNEANLTSGTIEMIPLNQNFDVVVLDEIQ 254
>2CE7-A nrPDB
Length = 476
Score = 30.1 bits (66), Expect = 1.4, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 11/117 (9%)
Query: 85 AFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSDV-PRGLVLVTGPTGSGKSTTLAAM 143
F GA + V E L F R+ P+G++LV GP G+GK+ A+
Sbjct: 14 TFKDVGGAEEAIEELKEVV---EFLKDPSKFNRIGARMPKGILLV-GPPGTGKTLLARAV 69
Query: 144 LDYLNNTKYHHILTIEDPIEFVH----ESKKCLVNQREVHRDTLGFSEALRSALRED 196
N +H ++ D +E + L Q + H + F + + + R
Sbjct: 70 AGEANVPFFH--ISGSDFVELFVGVGAARVRDLFAQAKAHAPCIVFIDEIDAVGRHR 124
>5OFO-C nrPDB
Length = 871
Score = 30.1 bits (66), Expect = 1.5, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Query: 120 DVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVH 179
+ P G L GPTG GK+ A+ +++ ++ + D EF+ + +
Sbjct: 599 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRI--DMSEFMEKHSVSRLVGAPPG 656
Query: 180 RDTLGFSEALRSALREDPDIILV 202
L A+R P +++
Sbjct: 657 YVGYEEGGYLTEAVRRRPYSVIL 679
>5L3R-B nrPDB
Length = 293
Score = 30.1 bits (66), Expect = 1.5, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 4/110 (3%)
Query: 56 NDKQRKDFEEFLET-DF--SFEVPGVARFRVNAFNQNRGAGAVFR-TIPSKVLTMEELGM 111
D+ + EE L DF V V R R + + +G+ + + VL M
Sbjct: 20 TDRVLDELEEALLVSDFGPKITVRIVERLREDIMSGKLKSGSEIKDALKESVLEMLAKKN 79
Query: 112 GEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDP 161
+ ++ ++++ G G GK+T+L + L N ++ D
Sbjct: 80 SKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDT 129
>4CIU-A nrPDB
Length = 727
Score = 30.1 bits (66), Expect = 1.5, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Query: 120 DVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVH 179
+ P G L GPTG GK+ A+ +++ ++ + D EF+ + +
Sbjct: 453 NRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRI--DMSEFMEKHSVSRLVGAPPG 510
Query: 180 RDTLGFSEALRSALREDPDIILV 202
L A+R P +++
Sbjct: 511 YVGYEEGGYLTEAVRRRPYSVIL 533
>5U1D-A nrPDB
Length = 748
Score = 30.1 bits (66), Expect = 1.5, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Query: 121 VPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHR 180
P + + GP GSGKST +AA+L L +L P+ +E + V +
Sbjct: 529 RPGEVTALVGPNGSGKST-VAALLQNLYQPTGGQLLLDGKPLP-QYEHRYLHRQVAAVGQ 586
Query: 181 DTLGFSEALR----SALREDP 197
+ F +L+ L + P
Sbjct: 587 EPQVFGRSLQENIAYGLTQKP 607
>6FA9-A nrPDB
Length = 655
Score = 29.7 bits (65), Expect = 1.7, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 97 RTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHIL 156
RTI ++ + F ++++ G TGSGK+T + L TK + +
Sbjct: 22 RTIQEVRKSLPVYAYRDAFLDAV-KEYQVLILVGETGSGKTTQIPQYLHEAGYTKGNRKI 80
Query: 157 TIEDP 161
P
Sbjct: 81 ACTQP 85
>6CY1-A nrPDB
Length = 329
Score = 29.7 bits (65), Expect = 1.7, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 38/92 (41%), Gaps = 10/92 (10%)
Query: 120 DVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIE--------FVHESKKC 171
P +++V G G GK+TT+ + + +L D E
Sbjct: 121 KKPY-VIMVVGVNGVGKTTTIGKLAHQFKSEGLKVVLGAADTFRAAAVDQLVIWSERVGV 179
Query: 172 LVNQREVHRDTLGFS-EALRSALREDPDIILV 202
+ ++ + D + + ++SA+ +D D++++
Sbjct: 180 PIVKQAMGSDPASVAFDTVQSAVSQDADVVII 211
>1SXJ-C nrPDB
Length = 340
Score = 29.7 bits (65), Expect = 1.7, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 15/82 (18%)
Query: 75 VPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGS 134
+P V ++R ++ G V T+ V +E + +L GP G+
Sbjct: 13 LPWVEKYRPETLDEVYGQNEVITTVRKFV---DEGKLPH------------LLFYGPPGT 57
Query: 135 GKSTTLAAMLDYLNNTKYHHIL 156
GK++T+ A+ + Y +++
Sbjct: 58 GKTSTIVALAREIYGKNYSNMV 79
>2V3C-C nrPDB
Length = 432
Score = 29.7 bits (65), Expect = 1.8, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 106 MEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDP 161
++ LG ++ + ++L+ G GSGK+TT A + Y+ L D
Sbjct: 82 VKLLGEEAKKLELNPKKQNVILLVGIQGSGKTTTAAKLARYIQKRGLKPALIAADT 137
>5Z6Q-A nrPDB
Length = 392
Score = 29.7 bits (65), Expect = 1.8, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 17/98 (17%)
Query: 112 GEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKC 171
E+F + RGL+L GP G+GK+ A+ N T + +I ++V E +K
Sbjct: 141 PELFTGLRAPARGLLLF-GPPGNGKTMLAKAVAAESNAT-FFNISAASLTSKYVGEGEKL 198
Query: 172 LVNQREVHRDTLGFSEALRSALRE-DPDIILVGEMRDL 208
+ AL + RE P II + E+ L
Sbjct: 199 V--------------RALFAVARELQPSIIFIDEVDSL 222
>5E7P-A nrPDB
Length = 745
Score = 29.7 bits (65), Expect = 1.8, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 108 ELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAM 143
L E+ K + P VLV+GP G GK+T + A+
Sbjct: 248 SLDEPELLKTLGATPHLGVLVSGPAGVGKATMVRAV 283
>6CUM-A nrPDB
Length = 315
Score = 29.7 bits (65), Expect = 1.8, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 91 GAGAVFRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNT 150
G R + + +E GEV + ++ VTGP G+GKSTT+ AM+
Sbjct: 36 ARGGSMRAVGRLLTLVESDRRGEVLAALGPATPRVIGVTGPPGAGKSTTVGAMVGAYRER 95
Query: 151 KYHHILTIEDP 161
+ DP
Sbjct: 96 GLRVAVLAVDP 106
>5EQT-A nrPDB
Length = 257
Score = 29.7 bits (65), Expect = 1.9, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 109 LGMGEVFKRV-SDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNT 150
L E+F+ V D P+G VL+ GP G GK+ A+ +N T
Sbjct: 25 LKHPELFEEVGIDPPKG-VLLYGPPGCGKTLMAKALAHEVNAT 66
>3UIE-A nrPDB
Length = 200
Score = 29.7 bits (65), Expect = 1.9, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Query: 116 KRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPI------EFVHESK 169
+R+ D ++ VTG +GSGKST A+ L + D + + +++
Sbjct: 18 QRLLDQKGCVIWVTGLSGSGKSTLACALNQMLYQKGKLCYILDGDNVRHGLNRDLSFKAE 77
Query: 170 KCLVNQREVHRDTLGFSEA 188
N R V F++A
Sbjct: 78 DRAENIRRVGEVAKLFADA 96
>4V6W-AQ nrPDB
Length = 148
Score = 29.7 bits (65), Expect = 1.9, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Query: 29 RVDGDVRRINLPPLEHKQVHALIYDIMNDKQRKDFEEFLETDFSFEVPGVARF 81
R +G ++ +N PLE + L Y + E+F D V G
Sbjct: 29 RGNGLLK-VNGRPLEQIEPKVLQYKLQEPLLLLGKEKFAGVDIRVRVSGGGHV 80
>4A2W-A nrPDB
Length = 936
Score = 29.7 bits (65), Expect = 2.0, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 17/114 (14%)
Query: 127 LVTGPTGSGKSTTLAAMLD--YLNNTKYHHI--------LTIEDPIEFVHESKKCLVNQR 176
L+ PTGSGK+ + + + N + + + + V +
Sbjct: 267 LICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPVYEQQKNVFKHHFERQGYS 326
Query: 177 EVHRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHT 230
FS + ED DII+V T ++ + + E G L ++ T
Sbjct: 327 VQGISGENFSNVSVEKVIEDSDIIVV-------TPQILVNSFEDGTLTSLSIFT 373
>6MFU-A nrPDB
Length = 225
Score = 29.7 bits (65), Expect = 2.0, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 117 RVSDVPRGLVLVTGPTGSGKSTTLAAMLD 145
V + P +++ GP+G+GKST L + +
Sbjct: 16 DVVNRP---LVICGPSGTGKSTLLKTLFE 41
>3CF0-A nrPDB
Length = 301
Score = 29.7 bits (65), Expect = 2.0, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 29/85 (34%), Gaps = 4/85 (4%)
Query: 112 GEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKC 171
+ F + P VL GP G GK+ A+ + + ++I+ P +
Sbjct: 38 PDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA----NFISIKGPELLTMWFGES 93
Query: 172 LVNQREVHRDTLGFSEALRSALRED 196
N RE+ + + D
Sbjct: 94 EANVREIFDKARQAAPCVLFFDELD 118
>3NZP-A nrPDB
Length = 619
Score = 29.7 bits (65), Expect = 2.1, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 200 ILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRVV-DVFPAEEKAMVRSMLSE 258
I V +D E I + AAE GH + T+ + + I + + F + +R L
Sbjct: 129 ITVNGFKDRELINIGFIAAEMGHNITLTIEGLNELEAIIDIAKERFKPKPNIGLRVRLHS 188
Query: 259 SLQSVISQTLIKKIGGGRVAAHEIMIGTPAIR--NLIREDKVAQMYSAI 305
+ + ++ GG + + T I NL++E+K+ + ++ I
Sbjct: 189 AGVGIWAK------SGGINSKFG-LTSTELIEAVNLLKENKLLEQFTMI 230
>5NJ3-A nrPDB
Length = 664
Score = 29.7 bits (65), Expect = 2.1, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 16/83 (19%)
Query: 119 SDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIE-----DPIEFVHESKKCLV 173
P GL + GPTG GKS ++LD L K L+ + P + V
Sbjct: 79 IMKP-GLNAILGPTGGGKS----SLLDVLAARKDPSGLSGDVLINGAPRPANFKCNSGYV 133
Query: 174 NQREVHRDTLG------FSEALR 190
Q +V TL FS ALR
Sbjct: 134 VQDDVVMGTLTVRENLQFSAALR 156
>2IUU-A nrPDB
Length = 491
Score = 29.7 bits (65), Expect = 2.2, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 107 EELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYL--NNTKYHHILTIEDP 161
++G + ++ +P +LV G TGSGKS + AML + +T L + DP
Sbjct: 200 HDIGGRPIITDLAKMPH--LLVAGTTGSGKSVGVNAMLLSILFKSTPSEARLIMIDP 254
>2IUT-A nrPDB
Length = 574
Score = 29.3 bits (64), Expect = 2.3, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 107 EELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYL--NNTKYHHILTIEDP 161
++G + ++ +P +LV G TGSGKS + AML + +T L + DP
Sbjct: 200 HDIGGRPIITDLAKMPH--LLVAGTTGSGKSVGVNAMLLSILFKSTPSEARLIMIDP 254
>6D00-1 nrPDB
Length = 883
Score = 29.3 bits (64), Expect = 2.3, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 66/196 (33%), Gaps = 21/196 (10%)
Query: 11 AKQGASDLHLSAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQRKDFEEFLETD 70
++ + L R DG + + P + V +++ QR + E+ L +
Sbjct: 506 LEKRLAQLQAEKSQADAERADGLLAEVVGPDQIMEVVSRWTGIPVSNLQRSEKEKLLHME 565
Query: 71 FSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTG 130
+ + Q+ A+ + + G+ + P L G
Sbjct: 566 --------EYMKQHVVGQDEAIKAIC-----DAIRLSRTGLQNR-----NRPLASFLFLG 607
Query: 131 PTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRDTLGFSEALR 190
PTG GK+ + + +L N I+ I D E++ + + L
Sbjct: 608 PTGCGKTLCVKELAAFLFNDPGA-IVRI-DMSEYMEKHAVSRLVGAPPGYIGHDEGGQLT 665
Query: 191 SALREDP-DIILVGEM 205
A+R P ++L EM
Sbjct: 666 EAVRRRPYTVVLFDEM 681
>1ODF-A nrPDB
Length = 290
Score = 29.3 bits (64), Expect = 2.3, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 9/96 (9%)
Query: 98 TIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAM----LDYLNNTKYH 153
+ + +++ + E F+ + P + +GP GSGKS T + ++ K
Sbjct: 8 VLDYTIEFLDKY-IPEWFETGNKCPL-FIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSI 65
Query: 154 HILTIEDPIEFVHESKKCLVNQREVHRDTLGFSEAL 189
+I+D F + L + + L L
Sbjct: 66 GYASIDD---FYLTHEDQLKLNEQFKNNKLLQGRGL 98
>5C18-A nrPDB
Length = 785
Score = 29.3 bits (64), Expect = 2.3, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 29/85 (34%), Gaps = 4/85 (4%)
Query: 112 GEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKC 171
+ F + P VL GP G GK+ A+ + + ++I+ P +
Sbjct: 499 PDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA----NFISIKGPELLTMWFGES 554
Query: 172 LVNQREVHRDTLGFSEALRSALRED 196
N RE+ + + D
Sbjct: 555 EANVREIFDKARQAAPCVLFFDELD 579
>2WJV-A nrPDB
Length = 800
Score = 29.3 bits (64), Expect = 2.4, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 9/51 (17%)
Query: 106 MEELGMGEV-------FKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNN 149
G+ ++ K V P L L+ GP G+GK+ T A ++ +L
Sbjct: 349 FTAQGLPDLNHSQVYAVKTVLQRP--LSLIQGPPGTGKTVTSATIVYHLAR 397
>4Q7L-A nrPDB
Length = 256
Score = 29.3 bits (64), Expect = 2.4, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 121 VPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHR 180
P V + GPTGSGK+T + ++ + + + ++ D + S + + V +
Sbjct: 29 KPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIG--IVLQ 86
Query: 181 DTLGFSEALRSALR 194
DT+ FS ++ L+
Sbjct: 87 DTILFSTTVKENLK 100
>4A2Q-A nrPDB
Length = 797
Score = 29.3 bits (64), Expect = 2.4, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 17/114 (14%)
Query: 127 LVTGPTGSGKSTTLAAMLD--YLNNTKYHHI--------LTIEDPIEFVHESKKCLVNQR 176
L+ PTGSGK+ + + + N + + + + V +
Sbjct: 267 LICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPVYEQQKNVFKHHFERQGYS 326
Query: 177 EVHRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHT 230
FS + ED DII+V T ++ + + E G L ++ T
Sbjct: 327 VQGISGENFSNVSVEKVIEDSDIIVV-------TPQILVNSFEDGTLTSLSIFT 373
>6MCK-A nrPDB
Length = 606
Score = 29.3 bits (64), Expect = 2.5, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 29/85 (34%), Gaps = 4/85 (4%)
Query: 112 GEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKC 171
+ F + P VL GP G GK+ A+ + + ++I+ P +
Sbjct: 292 PDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQA----NFISIKGPELLTMWFGES 347
Query: 172 LVNQREVHRDTLGFSEALRSALRED 196
N RE+ + + D
Sbjct: 348 EANVREIFDKARQAAPCVLFFDELD 372
>6EJ5-A nrPDB
Length = 637
Score = 29.3 bits (64), Expect = 2.5, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 9/51 (17%)
Query: 106 MEELGMGEV-------FKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNN 149
G+ ++ K V P L L+ GP G+GK+ T A ++ +L
Sbjct: 186 FTAQGLPDLNHSQVYAVKTVLQRP--LSLIQGPPGTGKTVTSATIVYHLAR 234
>6HIZ-Cg nrPDB
Length = 498
Score = 29.3 bits (64), Expect = 2.5, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Query: 126 VLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRDTLGF 185
+V GPTG GKS A M ++ + +I+T+ P V + +
Sbjct: 145 FIVDGPTGCGKS---ALMCQVVHFARSRNIVTLYVPDAKVWTHGEWCWPST-ILPGFFDA 200
Query: 186 SEALRSALR 194
+A RS L+
Sbjct: 201 PDAARSFLK 209
>3GP8-A nrPDB
Length = 574
Score = 29.3 bits (64), Expect = 2.7, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 100 PSKVLTMEELGMGEVFKRVSDVPRG--LVLVTGPTGSGKSTTLAAMLD 145
V G+ E V D G LV++TG G+GKSTT A+ D
Sbjct: 179 DWAVPKKARKGLSEEQASVLDQLAGHRLVVLTGGPGTGKSTTTKAVAD 226
>6QUZ-B nrPDB
Length = 599
Score = 29.3 bits (64), Expect = 2.7, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 121 VPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHR 180
P V + GPTGSGK+T + ++ + + + ++ D + S + + V +
Sbjct: 379 KPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIG--IVLQ 436
Query: 181 DTLGFSEALRSALR 194
DT+ FS ++ L+
Sbjct: 437 DTILFSTTVKENLK 450
>3DO6-A nrPDB
Length = 543
Score = 29.3 bits (64), Expect = 2.8, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 125 LVLVTG----PTGSGKSTTLAAMLDYLNNTKYHHILTIEDP 161
L+LVT P G GK+TT + LN I+T+ +P
Sbjct: 45 LILVTAVTPTPAGEGKTTTSIGLSMSLNRIGKKSIVTLREP 85
>5XXU-Q nrPDB
Length = 148
Score = 28.9 bits (63), Expect = 2.9, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 17/46 (36%)
Query: 34 VRRINLPPLEHKQVHALIYDIMNDKQRKDFEEFLETDFSFEVPGVA 79
+ R+N PLEH Q AL E F + D V G
Sbjct: 33 LLRVNGCPLEHLQPEALKVKAFEPLLLLGKERFQDVDIRVRVSGGG 78
>1G6H-A nrPDB
Length = 257
Score = 28.9 bits (63), Expect = 2.9, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 125 LVLVTGPTGSGKSTTLAAMLDYLNNTK-----YHHILTIEDPIEFVHES 168
+ L+ GP GSGKST + + +L + + +T ++P E H
Sbjct: 35 VTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYG 83
>6FVU-L nrPDB
Length = 388
Score = 28.9 bits (63), Expect = 3.0, Method: Composition-based stats.
Identities = 47/295 (15%), Positives = 97/295 (32%), Gaps = 43/295 (14%)
Query: 2 DITELLAFSAKQGASDLHL-SAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQR 60
I +L+ K+ + + ++ A P + G ++ L+ L + +
Sbjct: 52 SIGQLIGEVMKELSEEKYIVKASSGPRY-IVGVRNSVDRSKLKKGVRVTLDITTLTIMRI 110
Query: 61 KDFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSD 120
E ++ F+ G R + +V+ + L E+F+RV
Sbjct: 111 LP-RETDPLVYNMTSFEQGEI---TFDGIGGLTEQIREL-REVIEL-PLKNPEIFQRVGI 164
Query: 121 VPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHR 180
P VL+ GP G+GK+ A+ + F+ +V++ +
Sbjct: 165 KPPKGVLLYGPPGTGKTLLAKAVAATIGAN-------------FIFSPASGIVDKY-IGE 210
Query: 181 DTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDR- 239
E A +P II + E+ + R + TSA + I R
Sbjct: 211 SARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFS--------------EGTSADREIQRT 256
Query: 240 ----VVDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIMIGTPAIR 290
+ + + + +++ + + L++ R EI + A R
Sbjct: 257 LMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKV--EIPLPNEAGR 309
>4A36-A nrPDB
Length = 556
Score = 28.9 bits (63), Expect = 3.0, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 17/114 (14%)
Query: 127 LVTGPTGSGKSTTLAAMLD--YLNNTKYHHI--------LTIEDPIEFVHESKKCLVNQR 176
L+ PTGSGK+ + + + N + + + + V +
Sbjct: 26 LICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPVYEQQKNVFKHHFERQGYS 85
Query: 177 EVHRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHT 230
FS + ED DII+V T ++ + + E G L ++ T
Sbjct: 86 VQGISGENFSNVSVEKVIEDSDIIVV-------TPQILVNSFEDGTLTSLSIFT 132
>1A2O-A nrPDB
Length = 349
Score = 28.9 bits (63), Expect = 3.0, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 98 TIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAM----LDYLNNTK 151
T+ ++ M+ L E R+ P +V+V+ TG G TL A+ +D++ +
Sbjct: 54 TLDVEMPRMDGLDFLEKLMRL--RPMPVVMVSSLTGKGSEVTLRALELGAIDFVTKPQ 109
>1Z6G-A nrPDB
Length = 218
Score = 28.9 bits (63), Expect = 3.2, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 126 VLVTGPTGSGKSTTLAAMLDYLNNTKYHHI-LTIEDPIEFVHESKKCLVNQREVHRDTLG 184
+++ GP+G GK T + +L+ N Y + T E E + + D L
Sbjct: 26 LVICGPSGVGKGTLIKKLLNEFPNYFYFSVSCTTRKKREKEKEGVDYYFIDKTIFEDKLK 85
Query: 185 FSEALRS 191
+ L
Sbjct: 86 NEDFLEY 92
>5WVI-L nrPDB
Length = 437
Score = 28.9 bits (63), Expect = 3.4, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 54/150 (36%), Gaps = 8/150 (5%)
Query: 2 DITELLAFSAKQGASDLHL-SAGLPPMIRVDGDVRRINLPPLEHKQVHALIYDIMNDKQR 60
I +L+ K+ + + ++ A P + G ++ L+ L + +
Sbjct: 100 SIGQLIGEVMKELSEEKYIVKASSGPRY-IVGVRNSVDRSKLKKGVRVTLDITTLTIMRI 158
Query: 61 KDFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRTIPSKVLTMEELGMGEVFKRVSD 120
E ++ F+ G R + +V+ + L E+F+RV
Sbjct: 159 LP-RETDPLVYNMTSFEQGEI---TFDGIGGLTEQIREL-REVIEL-PLKNPEIFQRVGI 212
Query: 121 VPRGLVLVTGPTGSGKSTTLAAMLDYLNNT 150
P VL+ GP G+GK+ A+ +
Sbjct: 213 KPPKGVLLYGPPGTGKTLLAKAVAATIGAN 242
>5ZME-A nrPDB
Length = 687
Score = 28.9 bits (63), Expect = 3.5, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 101 SKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTI 158
T++ LG+G + ++ D+ G +L T P G ++ +A ++ +L +Y H I
Sbjct: 449 KLNETLDGLGLGVISDQLKDLQLGELLDTPPPGVDEAIAIAKVVQFLKAPEYSHFKRI 506
>3SI7-A nrPDB
Length = 285
Score = 28.9 bits (63), Expect = 3.6, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 125 LVLVTGPTGSGKSTTLAAMLDYLNNTK 151
++ +TG TGSGK++ L +L L ++
Sbjct: 66 MLAITGSTGSGKTSLLMLILGELEASE 92
>6AP1-A nrPDB
Length = 519
Score = 28.9 bits (63), Expect = 3.6, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 107 EELGMGEVFKRVSD---VPRGLVLVTGPTGSGKSTTLAAMLDYLNNT 150
E + + F + P +L+ GP G+GKS A+ N+T
Sbjct: 48 EAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANST 94
>2UVQ-A nrPDB
Length = 245
Score = 28.9 bits (63), Expect = 3.6, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 121 VPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHH 154
P L+ V+G T SGKST +++ L +
Sbjct: 24 RPF-LIGVSGGTASGKSTVCEKIMELLGQNEVEQ 56
>2IUS-A nrPDB
Length = 512
Score = 28.9 bits (63), Expect = 3.6, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 113 EVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYL---NNTKYHHILTIEDPIEF---VH 166
V ++ +P +LV G TGSG S + AM+ + + + I DP V+
Sbjct: 159 PVVADLAKMPH--LLVAGTTGSGASVGVNAMILSMLYKAQPEDVRFIMI-DPKMLELSVY 215
Query: 167 ESKKCLVNQREVHRDTLGFSEALRSALRE 195
E L+ EV D + ALR + E
Sbjct: 216 EGIPHLL--TEVVTDMKDAANALRWCVNE 242
>6EF0-L nrPDB
Length = 273
Score = 28.9 bits (63), Expect = 3.7, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 64/187 (34%), Gaps = 35/187 (18%)
Query: 109 LGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHES 168
L E+F+RV P VL+ GP G+GK+ A+ + F+
Sbjct: 38 LKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGAN-------------FIFSP 84
Query: 169 KKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTL 228
+V++ + E A +P II + E+ + R +
Sbjct: 85 ASGIVDKY-IGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFS-------------- 129
Query: 229 HTTSAAKTIDR-----VVDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGGRVAAHEIM 283
TSA + I R + + + + +++ + + L++ R EI
Sbjct: 130 EGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKV--EIP 187
Query: 284 IGTPAIR 290
+ A R
Sbjct: 188 LPNEAGR 194
>1JJ7-A nrPDB
Length = 260
Score = 28.5 bits (62), Expect = 3.8, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Query: 121 VPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHR 180
P + + GP GSGKST +AA+L L +L P+ +E + V +
Sbjct: 41 RPGEVTALVGPNGSGKST-VAALLQNLYQPTGGQLLLDGKPLP-QYEHRYLHRQVAAVGQ 98
Query: 181 DTLGFSEALR----SALREDP 197
+ F +L+ L + P
Sbjct: 99 EPQVFGRSLQENIAYGLTQKP 119
>6B5C-A nrPDB
Length = 307
Score = 28.5 bits (62), Expect = 3.9, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 111 MGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNT 150
M + FK P VL+ GP G+GK+ A+ T
Sbjct: 47 MPDFFKG-IRRPWKGVLMVGPPGTGKTMLAKAVATECGTT 85
>2X8A-A nrPDB
Length = 274
Score = 28.5 bits (62), Expect = 4.2, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Query: 112 GEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKC 171
+ FK + V VL+ GP G GK+ A + N + ++++ P +
Sbjct: 33 PDQFKALGLVTPAGVLLAGPPGCGKTLLAKA----VANESGLNFISVKGPELLNMYVGES 88
Query: 172 LVNQREVHRDTLGFSEAL 189
R+V + + +
Sbjct: 89 ERAVRQVFQRAKNSAPCV 106
>6N9A-E nrPDB
Length = 162
Score = 28.5 bits (62), Expect = 4.3, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 1/112 (0%)
Query: 97 RTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHIL 156
R + + LT E+L + +V+++G G+GK+T + M+ + +
Sbjct: 3 RHLRFENLTEEQLKRLAKILTENLKGGEVVILSGNLGAGKTTFVKGMIRAI-GLDEKMVK 61
Query: 157 TIEDPIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDL 208
+ + V+ K + + F + ED D I+V E DL
Sbjct: 62 SPTFTLMNVYPGLKTIYHLDLYRLQDTDFLSLDVEDILEDEDGIMVVEWGDL 113
>5XMK-A nrPDB
Length = 437
Score = 28.5 bits (62), Expect = 4.3, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 107 EELGMGEVFKRVSD---VPRGLVLVTGPTGSGKSTTLAAMLDYLNNT 150
E + + F + P +L+ GP G+GKS A+ N+T
Sbjct: 147 EAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANST 193
>4XGC-D nrPDB
Length = 459
Score = 28.5 bits (62), Expect = 4.3, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 126 VLVTGPTGSGKSTTLAAMLDYL--NNTKYHHILTI 158
+L+ GP GSGK+T + ++L L N + + L +
Sbjct: 52 LLLLGPRGSGKTTLINSVLADLLPNKSFGENTLIV 86
>3EIH-A nrPDB
Length = 340
Score = 28.5 bits (62), Expect = 4.4, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 107 EELGMGEVFKRVSD---VPRGLVLVTGPTGSGKSTTLAAMLDYLNNT 150
E + + F + P +L+ GP G+GKS A+ N+T
Sbjct: 50 EAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANST 96
>5ZQM-A nrPDB
Length = 309
Score = 28.5 bits (62), Expect = 4.6, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 111 MGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNT 150
M E FK P VL+ GP G+GK+ A+ T
Sbjct: 51 MPEFFKG-IRRPWKGVLMVGPPGTGKTLLAKAVATECKTT 89
>2NMV-A nrPDB
Length = 661
Score = 28.5 bits (62), Expect = 4.7, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 22/56 (39%)
Query: 96 FRTIPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTK 151
F + ++ E + + + G TG+GK+ T++ ++ +N
Sbjct: 5 FELVSKYQPQGDQPKAIEKLVKGIQEGKKHQTLLGATGTGKTFTVSNLIKEVNKPT 60
>2MYS-A nrPDB
Length = 843
Score = 28.5 bits (62), Expect = 4.7, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 118 VSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNN 149
++D +L+TG +G+GK+ ++ Y
Sbjct: 167 LTDRENQSILITGESGAGKTVNTKRVIQYFAT 198
>1W49-A nrPDB
Length = 331
Score = 28.5 bits (62), Expect = 4.8, Method: Composition-based stats.
Identities = 41/228 (17%), Positives = 79/228 (34%), Gaps = 45/228 (19%)
Query: 104 LTMEELGMGEVFKRVSDVPR--GLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDP 161
LT E +G V G+V+VTG SGK+ + A+ + L + + +P
Sbjct: 102 LTGELVGCSPVVAEFGGHRYASGMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEP 161
Query: 162 IEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEMRDLETI---------- 211
+ V D + R+ L+ +I++ ++++
Sbjct: 162 L-------SGYNTDFNVFVDDIA-----RAMLQHR--VIVIDSLKNVIGAAGGNTTSGGI 207
Query: 212 ---------RLALTAAETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKAMVRSMLSESLQS 262
+ AA G +V +L+ TS I +V A ++S +
Sbjct: 208 SRGAFDLLSDIGAMAASRGCVVIASLNPTSNDDKIVELVK--EASRSNSTSLVISTDVDG 265
Query: 263 VISQTLIKKIGGGRVAAHEIMIGTPAIRNLIREDKVAQMYSAIQTGGS 310
Q L + G + H + + E V ++++ Q+GG
Sbjct: 266 EW-QVLTRTGEGLQRLTHTL-------QTSYGEHSVLTIHTSKQSGGK 305
>6MJP-A nrPDB
Length = 241
Score = 28.2 bits (61), Expect = 5.1, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 125 LVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIED 160
+V + GP G+GK+T+ ++ + + +TI+D
Sbjct: 31 IVGLLGPNGAGKTTSFYMIVGLVA--RDEGTITIDD 64
>4O0M-A nrPDB
Length = 524
Score = 28.2 bits (61), Expect = 5.1, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 15/110 (13%)
Query: 44 HKQVHALIYDIMNDKQRKDFEEFLETDFSFEVPGVARFRVNAFNQNRGAGAVFRT----- 98
++ +++ ++R+ E L+ + + G F +N GA R
Sbjct: 201 VSDNVVILRNVLEGERRRRTVEILKLRGTTHMKGEYPFTINNGINIFPLGA-MRLTQRSS 259
Query: 99 ---IPSKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLD 145
+ S V T++E+ G FK ++L TG TG+GK+ ++ L+
Sbjct: 260 NVRVSSGVKTLDEMCGGGFFKD------SIILATGATGTGKTLLVSKFLE 303
>4UPB-C nrPDB
Length = 500
Score = 28.2 bits (61), Expect = 5.1, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 34/78 (43%)
Query: 193 LREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRVVDVFPAEEKAMV 252
+++ D+++ G + + L A HL + A T+ R+ +F ++ +
Sbjct: 296 IQQQIDVLMTGHAWQQQGMLTRLGAIVQRHLQLQQQQSDKTALTVIRLGGIFSRRQQYQL 355
Query: 253 RSMLSESLQSVISQTLIK 270
++ S +++ Q +K
Sbjct: 356 PVNVTASTLTLLLQKPLK 373
>1JI0-A nrPDB
Length = 240
Score = 28.2 bits (61), Expect = 5.4, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 119 SDVPRG-LVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIED 160
VPRG +V + G G+GK+TTL+A+ + K I +D
Sbjct: 27 LKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQD 69
>5FHF-A nrPDB
Length = 433
Score = 28.2 bits (61), Expect = 5.6, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 106 MEELGMGEVFKR---VSDVPRGLVLVTGPTGSGKSTTLAAMLDY 146
ME++ + E ++ + V VTG GSGK+T L +++
Sbjct: 1 MEDMILTEEMQKIMNLIQDDENNVFVTGKAGSGKTTFLKYLIEK 44
>1R6B-X nrPDB
Length = 758
Score = 28.2 bits (61), Expect = 5.7, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 120 DVPRGLVLVTGPTGSGKS 137
P G L GPTG GK+
Sbjct: 485 HKPVGSFLFAGPTGVGKT 502
>5VHF-B nrPDB
Length = 340
Score = 27.8 bits (60), Expect = 6.9, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 42/112 (37%), Gaps = 19/112 (16%)
Query: 99 IPSKVLTMEE-----LGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYH 153
+ +++ ++E L E ++ + P V++ GP G+GK+ A+ + + T
Sbjct: 98 LDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLR 157
Query: 154 HILTIEDPIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEM 205
+ + Q+ + E R A P I+ + E+
Sbjct: 158 VV--------------GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 195
>3QTP-A nrPDB
Length = 441
Score = 27.8 bits (60), Expect = 7.0, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 10/106 (9%)
Query: 143 MLDYLNNTKYHHILTIEDPI-EFVHESKKCLVNQR---EVHRDTLGFSEALRSALREDPD 198
+ +Y++ K++ I +IEDP E + + ++ D L + R + D +
Sbjct: 285 IAEYVDYGKHYPIASIEDPFAEDDWAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKN 344
Query: 199 -----IILVGEMRDL-ETIRLALTAAETGHLVFGTLHTTSAAKTID 238
+I V ++ L ET + A E G V + + T
Sbjct: 345 ACNSVLIKVNQIGTLTETFKTIKMAQEKGWGVMASHRSGETEDTFI 390
>6AYB-A nrPDB
Length = 466
Score = 27.8 bits (60), Expect = 7.3, Method: Composition-based stats.
Identities = 16/112 (14%), Positives = 45/112 (40%), Gaps = 4/112 (3%)
Query: 97 RTIPSKVLTMEELGMGEVFK---RVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYH 153
R + + + + + + +K ++DV R +L+ G ++++ + +N
Sbjct: 229 RLLDESKMDVVDHLLTQKYKDGQELTDVHRIGILIAGLFAGQHTSSITSSWTLMNVISNK 288
Query: 154 HILTIEDPIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEM 205
+L + +++ +V + ++ ALR P +I++ M
Sbjct: 289 KVLEKVRKEQEEIMGSDKVLDYDKVMKMDY-LEACMKEALRMYPPLIMIMRM 339
>6MSK-B nrPDB
Length = 440
Score = 27.8 bits (60), Expect = 7.4, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 42/112 (37%), Gaps = 19/112 (16%)
Query: 99 IPSKVLTMEE-----LGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYH 153
+ +++ ++E L E ++ + P V++ GP G+GK+ A+ + + T
Sbjct: 190 LDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLR 249
Query: 154 HILTIEDPIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEM 205
+ + Q+ + E R A P I+ + E+
Sbjct: 250 VV--------------GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 287
>5VFP-B nrPDB
Length = 389
Score = 27.8 bits (60), Expect = 7.5, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 42/112 (37%), Gaps = 19/112 (16%)
Query: 99 IPSKVLTMEE-----LGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYH 153
+ +++ ++E L E ++ + P V++ GP G+GK+ A+ + + T
Sbjct: 139 LDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLR 198
Query: 154 HILTIEDPIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEM 205
+ + Q+ + E R A P I+ + E+
Sbjct: 199 VV--------------GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 236
>5UBU-A nrPDB
Length = 332
Score = 27.8 bits (60), Expect = 7.5, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 29/72 (40%)
Query: 126 VLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEFVHESKKCLVNQREVHRDTLGF 185
++V G+G+ + + + ++ I P+ + + +V+ R+ +
Sbjct: 11 IMVKRGVGAGRKPVTHHLTEEMQKEFHYTIGPYSTPVLTIEPGDRVIVDTRDAFEGAISS 70
Query: 186 SEALRSALREDP 197
+ + S L + P
Sbjct: 71 EQDIPSQLLKMP 82
>5VHO-B nrPDB
Length = 267
Score = 27.8 bits (60), Expect = 7.7, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 42/112 (37%), Gaps = 19/112 (16%)
Query: 99 IPSKVLTMEE-----LGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYH 153
+ +++ ++E L E ++ + P V++ GP G+GK+ A+ + + T
Sbjct: 24 LDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLR 83
Query: 154 HILTIEDPIEFVHESKKCLVNQREVHRDTLGFSEALRSALREDPDIILVGEM 205
+ + Q+ + E R A P I+ + E+
Sbjct: 84 VV--------------GSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 121
>6EPG-B nrPDB
Length = 401
Score = 27.8 bits (60), Expect = 7.7, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 106 MEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTLAAML 144
+ EV KR + ++ VTG GSG ++T+ M+
Sbjct: 85 LSSTQFDEVLKRDEPQKKEVIFVTGIPGSGATSTVKNMM 123
>5XDR-A nrPDB
Length = 690
Score = 27.4 bits (59), Expect = 8.3, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 101 SKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTL 140
K L + + F + + VLV G TGSGK+T +
Sbjct: 27 KKRLQLPVWEYKDRFTDILVRHQSFVLV-GETGSGKTTQI 65
>6C2V-A nrPDB
Length = 115
Score = 27.4 bits (59), Expect = 8.5, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 114 VFKRVSDVPRGLVLVTGPTGSGKSTTLAAMLDYLNNTKYHHILTIEDPIEF 164
V + +V++ GP+GSGKST LA ++ + + + E
Sbjct: 46 VAEEAERRNADIVVIVGPSGSGKST-LAKIVKKIIARAGAKTIEVTTEEEL 95
>6ID1-V nrPDB
Length = 795
Score = 27.4 bits (59), Expect = 9.0, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 101 SKVLTMEELGMGEVFKRVSDVPRGLVLVTGPTGSGKSTTL 140
K L + + F + + VLV G TGSGK+T +
Sbjct: 132 KKRLQLPVWEYKDRFTDILVRHQSFVLV-GETGSGKTTQI 170
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.310 0.129 0.316
Lambda K H
0.267 0.0396 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,884,206
Number of Sequences: 36641
Number of extensions: 379952
Number of successful extensions: 2310
Number of sequences better than 10.0: 148
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 114
Number of HSP's that attempted gapping in prelim test: 2094
Number of HSP's gapped (non-prelim): 247
length of query: 344
length of database: 10,336,785
effective HSP length: 98
effective length of query: 246
effective length of database: 6,745,967
effective search space: 1659507882
effective search space used: 1659507882
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 59 (27.4 bits)