BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P24522
         (165 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

2KG4-A nrPDB                                                          338   5e-94
3CG6-A nrPDB                                                          176   5e-45
6HCQ-N2 nrPDB                                                          46   9e-06
4V6W-AM nrPDB                                                          40   4e-04
6AZ1-Q nrPDB                                                           29   1.0  
5XXU-M nrPDB                                                           29   1.1  
1IKO-P nrPDB                                                           28   1.3  
4BTS-AU nrPDB                                                          28   1.9  
4UF7-C nrPDB                                                           28   2.1  
3JAM-M nrPDB                                                           28   2.2  

>2KG4-A nrPDB
          Length = 165

 Score =  338 bits (868), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 165/165 (100%), Positives = 165/165 (100%)

Query: 1   MTLEEFSAGEQKTERMDKVGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLA 60
           MTLEEFSAGEQKTERMDKVGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLA
Sbjct: 1   MTLEEFSAGEQKTERMDKVGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLA 60

Query: 61  ADEDDDRDVALQIHFTLIQAFCCENDINILRVSNPGRLAELLLLETDAGPAASEGAEQPP 120
           ADEDDDRDVALQIHFTLIQAFCCENDINILRVSNPGRLAELLLLETDAGPAASEGAEQPP
Sbjct: 61  ADEDDDRDVALQIHFTLIQAFCCENDINILRVSNPGRLAELLLLETDAGPAASEGAEQPP 120

Query: 121 DLHCVLVTNPHSSQWKDPALSQLICFCRESRYMDQWVPVINLPER 165
           DLHCVLVTNPHSSQWKDPALSQLICFCRESRYMDQWVPVINLPER
Sbjct: 121 DLHCVLVTNPHSSQWKDPALSQLICFCRESRYMDQWVPVINLPER 165


>3CG6-A nrPDB
          Length = 146

 Score =  176 bits (446), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 85/153 (55%), Positives = 106/153 (69%), Gaps = 8/153 (5%)

Query: 12  KTERMDKVGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVAL 71
            T RM   G AL E+L  A  Q  +T GVYE+AK+LNVDPDNV  C+LAADE+D+ D+AL
Sbjct: 2   STARMQGAGKALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAADEEDEGDIAL 61

Query: 72  QIHFTLIQAFCCENDINILRVSNPGRLAELLLLETDAGPAASEGAEQPPDLHCVLVTNPH 131
           QIHFTLIQAFCCENDI+I+RV +  RLA ++  + + G         P DLHC+L++NP+
Sbjct: 62  QIHFTLIQAFCCENDIDIVRVGDVQRLAAIVGSDEEGGA--------PGDLHCILISNPN 113

Query: 132 SSQWKDPALSQLICFCRESRYMDQWVPVINLPE 164
              WKDPAL +L  FC ESR  + WVP I LPE
Sbjct: 114 EDTWKDPALEKLSLFCEESRSFNDWVPSITLPE 146


>6HCQ-N2 nrPDB
          Length = 132

 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 18/123 (14%)

Query: 19  VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
           V  AL+EVL  AL    +  G+ EAAK L  D     LC+LA++ D+       ++  L+
Sbjct: 14  VNTALQEVLKTALIHDGLARGIREAAKAL--DKRQAHLCVLASNCDE------PMYVKLV 65

Query: 79  QAFCCENDINILRVSNPGRLAE---LLLLETDAGPAASEGAEQPPDLHCVLVTN-PHSSQ 134
           +A C E+ IN+++V +  +L E   L  ++ +  P    G        CV+V +    SQ
Sbjct: 66  EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCS------CVVVKDYGKESQ 119

Query: 135 WKD 137
            KD
Sbjct: 120 AKD 122


>4V6W-AM nrPDB
          Length = 139

 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 8/82 (9%)

Query: 19  VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
           +  AL+EVL K+L    +  G+++A K L  D    VLC+LA   D+        +  L+
Sbjct: 21  INTALQEVLKKSLIADGLVHGIHQACKAL--DKRQAVLCILAESFDEPN------YKKLV 72

Query: 79  QAFCCENDINILRVSNPGRLAE 100
            A C E+ I ++RV +  +L E
Sbjct: 73  TALCNEHQIPLIRVDSHKKLGE 94


>6AZ1-Q nrPDB
          Length = 141

 Score = 28.9 bits (63), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 8/80 (10%)

Query: 21  DALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQA 80
           DA+  V+ KAL    +  G+ E A+ L  D     +C+LA D +D+       +  L+ A
Sbjct: 28  DAVRIVIQKALEANGLVRGLSEVARTL--DCKTAHMCILADDCEDEE------YKKLVTA 79

Query: 81  FCCENDINILRVSNPGRLAE 100
              + +I+++ V    +LA+
Sbjct: 80  LAKQGNIDLINVEEREKLAQ 99


>5XXU-M nrPDB
          Length = 142

 Score = 28.9 bits (63), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 8/79 (10%)

Query: 22  ALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQAF 81
           A+ +VL  AL    +  G++E AK L  D     +C L+         +   +  L+Q  
Sbjct: 27  AIRKVLKNALIHDGLVRGLHEVAKAL--DAKKAQVCFLS------ESCSEPAYKKLVQGL 78

Query: 82  CCENDINILRVSNPGRLAE 100
           C E+ I +L V++   L E
Sbjct: 79  CKEHGIPLLDVTDSKELGE 97


>1IKO-P nrPDB
          Length = 178

 Score = 28.5 bits (62), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 10/65 (15%)

Query: 18 KVGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADED-------DDRDVA 70
          ++GD L+ +  K  S+   TVG YE  K+  VD D    C +  +          D+DV 
Sbjct: 27 QIGDKLDIICPKVDSK---TVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVK 83

Query: 71 LQIHF 75
            I F
Sbjct: 84 FTIKF 88


>4BTS-AU nrPDB
          Length = 126

 Score = 28.1 bits (61), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 12/84 (14%)

Query: 23  LEEVLSKALS----QRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
           L EVL+K +     Q  I+ G++E   L  ++    +   +A D D         +  L+
Sbjct: 8   LNEVLAKVIKSSNCQDAISKGLHEV--LRTIEAKQALFVCVAEDCDQGN------YVKLV 59

Query: 79  QAFCCENDINILRVSNPGRLAELL 102
           +A C +N+I  + V     L E L
Sbjct: 60  KALCAKNEIKYVSVPKRASLGEYL 83


>4UF7-C nrPDB
          Length = 153

 Score = 27.7 bits (60), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 10/65 (15%)

Query: 18 KVGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADE-------DDDRDVA 70
          ++GD L+ +  K  S+   TVG YE  K+  VD D    C +  +          D+D+ 
Sbjct: 30 QIGDKLDIICPKVDSK---TVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCAKPDQDIK 86

Query: 71 LQIHF 75
            I F
Sbjct: 87 FTIKF 91


>3JAM-M nrPDB
          Length = 134

 Score = 27.7 bits (60), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 8/80 (10%)

Query: 21  DALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQA 80
           DAL+ VL  +L    +  G+ E+AK L      + + + +  E+     A+     L+Q 
Sbjct: 19  DALKVVLRTSLVHDGLARGLRESAKALTRGEGQLAVLVESVTEE-----AIS---KLVQG 70

Query: 81  FCCENDINILRVSNPGRLAE 100
              EN++ +++V++  +L E
Sbjct: 71  LATENNVPLIKVADAKQLGE 90


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

2KG4-A nrPDB                                                          264   1e-71
3CG6-A nrPDB                                                          225   6e-60
6HCQ-N2 nrPDB                                                         132   9e-32
4V6W-AM nrPDB                                                         119   7e-28

Sequences not found previously or not previously below threshold:

4V7E-BM nrPDB                                                          88   2e-18
5XXU-M nrPDB                                                           84   3e-17
3JBP-R nrPDB                                                           63   4e-11
6OKK-R nrPDB                                                           62   8e-11
4V8M-AF nrPDB                                                          62   9e-11
3JAM-M nrPDB                                                           61   2e-10
5OPT-i nrPDB                                                           61   4e-10
4V92-BM nrPDB                                                          60   5e-10
5JUS-JB nrPDB                                                          59   7e-10
6AZ1-Q nrPDB                                                           54   2e-08
5LYB-c2 nrPDB                                                          53   5e-08
5DGF-C2 nrPDB                                                          53   6e-08
4BTS-AU nrPDB                                                          52   1e-07
5JPQ-U nrPDB                                                           41   4e-04
2FC3-A nrPDB                                                           38   0.002
2LBW-A nrPDB                                                           30   0.39 
5DCV-A nrPDB                                                           28   1.6  
3ND1-A nrPDB                                                           27   5.2  

>2KG4-A nrPDB
          Length = 165

 Score =  264 bits (675), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 165/165 (100%), Positives = 165/165 (100%)

Query: 1   MTLEEFSAGEQKTERMDKVGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLA 60
           MTLEEFSAGEQKTERMDKVGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLA
Sbjct: 1   MTLEEFSAGEQKTERMDKVGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLA 60

Query: 61  ADEDDDRDVALQIHFTLIQAFCCENDINILRVSNPGRLAELLLLETDAGPAASEGAEQPP 120
           ADEDDDRDVALQIHFTLIQAFCCENDINILRVSNPGRLAELLLLETDAGPAASEGAEQPP
Sbjct: 61  ADEDDDRDVALQIHFTLIQAFCCENDINILRVSNPGRLAELLLLETDAGPAASEGAEQPP 120

Query: 121 DLHCVLVTNPHSSQWKDPALSQLICFCRESRYMDQWVPVINLPER 165
           DLHCVLVTNPHSSQWKDPALSQLICFCRESRYMDQWVPVINLPER
Sbjct: 121 DLHCVLVTNPHSSQWKDPALSQLICFCRESRYMDQWVPVINLPER 165


>3CG6-A nrPDB
          Length = 146

 Score =  225 bits (574), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 85/153 (55%), Positives = 106/153 (69%), Gaps = 8/153 (5%)

Query: 12  KTERMDKVGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVAL 71
            T RM   G AL E+L  A  Q  +T GVYE+AK+LNVDPDNV  C+LAADE+D+ D+AL
Sbjct: 2   STARMQGAGKALHELLLSAQRQGCLTAGVYESAKVLNVDPDNVTFCVLAADEEDEGDIAL 61

Query: 72  QIHFTLIQAFCCENDINILRVSNPGRLAELLLLETDAGPAASEGAEQPPDLHCVLVTNPH 131
           QIHFTLIQAFCCENDI+I+RV +  RLA ++  + + G         P DLHC+L++NP+
Sbjct: 62  QIHFTLIQAFCCENDIDIVRVGDVQRLAAIVGSDEEGGA--------PGDLHCILISNPN 113

Query: 132 SSQWKDPALSQLICFCRESRYMDQWVPVINLPE 164
              WKDPAL +L  FC ESR  + WVP I LPE
Sbjct: 114 EDTWKDPALEKLSLFCEESRSFNDWVPSITLPE 146


>6HCQ-N2 nrPDB
          Length = 132

 Score =  132 bits (331), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 18/131 (13%)

Query: 19  VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
           V  AL+EVL  AL    +  G+ EAAK L  D     LC+LA++ D+       ++  L+
Sbjct: 14  VNTALQEVLKTALIHDGLARGIREAAKAL--DKRQAHLCVLASNCDEP------MYVKLV 65

Query: 79  QAFCCENDINILRVSNPGRLAE---LLLLETDAGPAASEGAEQPPDLHCVLVTN-PHSSQ 134
           +A C E+ IN+++V +  +L E   L  ++ +  P    G        CV+V +    SQ
Sbjct: 66  EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCS------CVVVKDYGKESQ 119

Query: 135 WKDPALSQLIC 145
            KD       C
Sbjct: 120 AKDVIEEYFKC 130


>4V6W-AM nrPDB
          Length = 139

 Score =  119 bits (298), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 20/126 (15%)

Query: 19  VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
           +  AL+EVL K+L    +  G+++A K L  D    VLC+LA   D+        +  L+
Sbjct: 21  INTALQEVLKKSLIADGLVHGIHQACKAL--DKRQAVLCILAESFDEPN------YKKLV 72

Query: 79  QAFCCENDINILRVSNPGRLAE---LLLLETDAGPAASEGAEQPPDLHCVLVTNPHSSQW 135
            A C E+ I ++RV +  +L E   L  ++ +  P    G         V++ +      
Sbjct: 73  TALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSV------VVIKDFGEET- 125

Query: 136 KDPALS 141
             PAL 
Sbjct: 126 --PALD 129


>4V7E-BM nrPDB
          Length = 171

 Score = 87.5 bits (215), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 17/117 (14%)

Query: 21  DALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQA 80
            AL+ V+ K+ +   +  G+ EAAK +  +     LC+LA D D         +  L++A
Sbjct: 56  TALQLVMKKSSAHDGLVKGLREAAKAI--EKHAAQLCVLAEDCDQPD------YVKLVKA 107

Query: 81  FCCENDINILRVSNPGRLAE---LLLLETDAGPAASEGAEQPPDLHCVLVTNPHSSQ 134
            C E++++++ V +   L E   L  ++++       G        CV+V +     
Sbjct: 108 LCAEHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVVGCS------CVVVKDYGEES 158


>5XXU-M nrPDB
          Length = 142

 Score = 84.0 bits (206), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 18/119 (15%)

Query: 21  DALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQA 80
            A+ +VL  AL    +  G++E AK L  D     +C L+    +        +  L+Q 
Sbjct: 26  TAIRKVLKNALIHDGLVRGLHEVAKAL--DAKKAQVCFLSESCSEPA------YKKLVQG 77

Query: 81  FCCENDINILRVSNPGRLAE---LLLLETDAGPAASEGAEQPPDLHCVLVTN-PHSSQW 135
            C E+ I +L V++   L E   L  ++ D       GA       CV VT+    S+ 
Sbjct: 78  LCKEHGIPLLDVTDSKELGEWAGLCKVDKDGTARKVVGAS------CVCVTDFGEESEA 130


>3JBP-R nrPDB
          Length = 114

 Score = 63.2 bits (152), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 17/126 (13%)

Query: 21  DALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQA 80
            A+++V+  A     + +G+ E  K  +++     +C L+    +        +  LI  
Sbjct: 2   TAIQKVIKNAHVHDGLKIGIREVIK--SIESQEAKVCFLSDVCSEPA------YKKLITT 53

Query: 81  FCCENDINILRVSNPGR----LAELLLLETDAGPAASEGAEQPPDLHCVLVTNPHSSQWK 136
            C E +I +  V N  +     A L  L+ +       GA         +V     S  K
Sbjct: 54  LCAEKNIPLFMVQNDSKDLGHWAGLFKLDNEGNARKIIGASS-----VAVVDFGEDSAEK 108

Query: 137 DPALSQ 142
           D  LSQ
Sbjct: 109 DFLLSQ 114


>6OKK-R nrPDB
          Length = 141

 Score = 62.5 bits (150), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 17/126 (13%)

Query: 21  DALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQA 80
            A+++V+  A     + +G+ E  K  +++     +C L+    +        +  LI  
Sbjct: 23  TAIQKVIKNAHVHDGLKIGIREVIK--SIESQEAKVCFLSDVCSEPA------YKKLITT 74

Query: 81  FCCENDINILRVSNPGR----LAELLLLETDAGPAASEGAEQPPDLHCVLVTNPHSSQWK 136
            C E +I +  V N  +     A L  L+ +       GA         +V     S  K
Sbjct: 75  LCAEKNIPLFMVQNDSKDLGHWAGLFKLDNEGNARKIIGASS-----VAVVDFGEDSAEK 129

Query: 137 DPALSQ 142
           D  LSQ
Sbjct: 130 DFLLSQ 135


>4V8M-AF nrPDB
          Length = 144

 Score = 62.5 bits (150), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 18/131 (13%)

Query: 17  DKVGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFT 76
           D + DAL  VL KA     +  G+ E  + L  D     LC+LA D +D+       +  
Sbjct: 27  DSLEDALRIVLMKARETNGLICGLSEVTRAL--DRRTAHLCVLADDCEDEE------YKK 78

Query: 77  LIQAFCCENDINILRVSNPGRLAELLLLET---DAGPAASEGAEQPPDLHCVLVTN-PHS 132
           L+ A   +N+I+++ +    +LA+   L     D     +          C+ V +    
Sbjct: 79  LVTALAKQNNIDLVSMDEREKLAQWAGLTRMAADGSVRKTLKCS------CLAVRDFGER 132

Query: 133 SQWKDPALSQL 143
           ++  D  LSQL
Sbjct: 133 TKALDYLLSQL 143


>3JAM-M nrPDB
          Length = 134

 Score = 60.9 bits (146), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 11/97 (11%)

Query: 19  VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
           + DAL+ VL  +L    +  G+ E+AK L        L +L     ++          L+
Sbjct: 17  IEDALKVVLRTSLVHDGLARGLRESAKALTRGEGQ--LAVLVESVTEEAIS------KLV 68

Query: 79  QAFCCENDINILRVSNPGRLAE---LLLLETDAGPAA 112
           Q    EN++ +++V++  +L E   L  ++ D     
Sbjct: 69  QGLATENNVPLIKVADAKQLGEWAGLGKIDRDGNARK 105


>5OPT-i nrPDB
          Length = 141

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 17/121 (14%)

Query: 17  DKVGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFT 76
           + + DAL  VL K+     +  G+ E A+ L  D     LC+LA D +D+       +  
Sbjct: 24  ENLEDALRIVLQKSREVNGLIRGLSEVARAL--DRRTAHLCVLAEDCEDEE------YKK 75

Query: 77  LIQAFCCENDINILRVSNPGRLAE---LLLLETDAGPAASEGAEQPPDLHCVLVTNPHSS 133
           LI A   + +++++ V    +LA+   L  +++      +          CV V +    
Sbjct: 76  LITALAKQGEVDLINVEEREKLAQWAGLTKMDSTGELKKTFKCS------CVAVRDFGER 129

Query: 134 Q 134
            
Sbjct: 130 T 130


>4V92-BM nrPDB
          Length = 120

 Score = 59.8 bits (143), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 42/99 (42%), Gaps = 13/99 (13%)

Query: 19  VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
           + DAL+ VL  AL    +  G+ E+ K L       +L +L +   +   +       L+
Sbjct: 1   IEDALKVVLRTALVHDGLARGLRESTKALT--RGEALLVVLVSSVTEANII------KLV 52

Query: 79  QAFCC--ENDINILRVSNPGRLAE---LLLLETDAGPAA 112
           +      EN + +++V++  +L E   L  ++ +     
Sbjct: 53  EGLANDPENKVPLIKVADAKQLGEWAGLGKIDREGNARK 91


>5JUS-JB nrPDB
          Length = 143

 Score = 59.4 bits (142), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 42/99 (42%), Gaps = 13/99 (13%)

Query: 19  VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
           + DAL+ VL  AL    +  G+ E+ K L       +L +L +   +   +       L+
Sbjct: 24  IEDALKVVLRTALVHDGLARGLRESTKALT--RGEALLVVLVSSVTEANII------KLV 75

Query: 79  QAFCC--ENDINILRVSNPGRLAE---LLLLETDAGPAA 112
           +      EN + +++V++  +L E   L  ++ +     
Sbjct: 76  EGLANDPENKVPLIKVADAKQLGEWAGLGKIDREGNARK 114


>6AZ1-Q nrPDB
          Length = 141

 Score = 54.4 bits (129), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 18/131 (13%)

Query: 17  DKVGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFT 76
           + + DA+  V+ KAL    +  G+ E A+ L  D     +C+LA D +D+       +  
Sbjct: 24  ESLEDAVRIVIQKALEANGLVRGLSEVARTL--DCKTAHMCILADDCEDEE------YKK 75

Query: 77  LIQAFCCENDINILRVSNPGRLAE---LLLLETDAGPAASEGAEQPPDLHCVLVTN-PHS 132
           L+ A   + +I+++ V    +LA+   L+  +       +           V + +    
Sbjct: 76  LVTALAKQGNIDLINVEEREKLAQWAGLVRRDVAGEVTKTLKCSS------VAIRDFGER 129

Query: 133 SQWKDPALSQL 143
           ++  D  LSQL
Sbjct: 130 TKALDYLLSQL 140


>5LYB-c2 nrPDB
          Length = 124

 Score = 53.2 bits (126), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 10/86 (11%)

Query: 21  DALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQA 80
           DAL+ VL  AL    +  G+ E+ K L       +L +L +   +   +       L++ 
Sbjct: 7   DALKVVLRTALVHDGLARGLRESTKALT--RGEALLVVLVSSVTEANII------KLVEG 58

Query: 81  FCC--ENDINILRVSNPGRLAELLLL 104
                EN + +++V++  +L E   L
Sbjct: 59  LANDPENKVPLIKVADAKQLGEWAGL 84


>5DGF-C2 nrPDB
          Length = 142

 Score = 52.8 bits (125), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 10/86 (11%)

Query: 21  DALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQA 80
           DAL+ VL  AL    +  G+ E+ K L       +L +L +   +   +       L++ 
Sbjct: 25  DALKVVLRTALVHDGLARGLRESTKALT--RGEALLVVLVSSVTEANII------KLVEG 76

Query: 81  FCC--ENDINILRVSNPGRLAELLLL 104
                EN + +++V++  +L E   L
Sbjct: 77  LANDPENKVPLIKVADAKQLGEWAGL 102


>4BTS-AU nrPDB
          Length = 126

 Score = 52.1 bits (123), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 40/105 (38%), Gaps = 11/105 (10%)

Query: 17  DKVGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFT 76
            ++ + L +V+  +  Q  I+ G++E  +   ++    +   +A D D         +  
Sbjct: 6   QQLNEVLAKVIKSSNCQDAISKGLHEVLR--TIEAKQALFVCVAEDCDQGN------YVK 57

Query: 77  LIQAFCCENDINILRVSNPGRLAELLL---LETDAGPAASEGAEQ 118
           L++A C +N+I  + V     L E L              +G   
Sbjct: 58  LVKALCAKNEIKYVSVPKRASLGEYLGHFTANAKGEIKKVKGCSS 102


>5JPQ-U nrPDB
          Length = 130

 Score = 40.5 bits (93), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 44/120 (36%), Gaps = 8/120 (6%)

Query: 17  DKVGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFT 76
             + D + E + KA     I  G  E  K   V+     L ++A D   +  VA   H  
Sbjct: 16  QDLADKVLEAVRKAKESGKIKKGTNETTKA--VERGQAKLVIIAEDVQPEEIVA---HLP 70

Query: 77  LIQAFCCENDINILRVSNPGRLAELLLLETDAGPAASEGAEQPPDLHCVLVTNPHSSQWK 136
           L    C E  I  + VS+   L E   L+     AA     +  DL   ++   +  + K
Sbjct: 71  L---LCDEKKIPYVYVSSKKALGEACGLQVATASAAILEPGEAKDLVDEIIKRVNEIKGK 127


>2FC3-A nrPDB
          Length = 124

 Score = 38.2 bits (87), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 11/102 (10%)

Query: 25  EVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLIQAFCCE 84
           E + +A     I  G  E  K   V+     L ++A D D    V   +H  L    C E
Sbjct: 18  EAVKRARETGRIKKGTNETTKA--VERGLAKLVVIAEDVDPPEIV---MHLPL---LCDE 69

Query: 85  NDINILRVSNPGRLAELLLLETDAGPAASEGAEQPPDLHCVL 126
             I  + V +  RL E   +E     AAS    +P D   ++
Sbjct: 70  KKIPYVYVPSKKRLGEAAGIEV---AAASVAIIEPGDAETLV 108


>2LBW-A nrPDB
          Length = 121

 Score = 30.5 bits (67), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 8/84 (9%)

Query: 17  DKVGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFT 76
            K+   + + + KA   + +  GV E  K L        L ++A       D+      +
Sbjct: 2   KKLNKKVLKTVKKASKAKNVKRGVKEVVKALR--KGEKGLVVIA------GDIWPADVIS 53

Query: 77  LIQAFCCENDINILRVSNPGRLAE 100
            I   C ++ +  + + +   L  
Sbjct: 54  HIPVLCEDHSVPYIFIPSKQDLGA 77


>5DCV-A nrPDB
          Length = 132

 Score = 28.2 bits (61), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 29/81 (35%), Gaps = 9/81 (11%)

Query: 19 VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDDDRDVALQIHFTLI 78
             AL+ V   A     I  G  E  K   V+     L ++A D D +  VA       +
Sbjct: 17 AEKALQAV-EIARDTGKIRKGTNETTKA--VERGQAKLVIIAEDVDPEEIVAH------L 67

Query: 79 QAFCCENDINILRVSNPGRLA 99
             C E +I  + V +   L 
Sbjct: 68 PPLCEEKEIPYIYVPSKKELG 88


>3ND1-A nrPDB
          Length = 275

 Score = 26.6 bits (57), Expect = 5.2,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 20/56 (35%)

Query: 75  FTLIQAFCCENDINILRVSNPGRLAELLLLETDAGPAASEGAEQPPDLHCVLVTNP 130
            T IQA C  + I +  +  P  +     L     PA +E      D  C   + P
Sbjct: 162 ITAIQALCAAHAIPLNDIGAPVVITTGRQLRDHGWPAGTETVVAMLDGECSFQSLP 217


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.312    0.126    0.341 

Lambda     K      H
   0.267   0.0391    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,899,775
Number of Sequences: 36641
Number of extensions: 196507
Number of successful extensions: 534
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 484
Number of HSP's gapped (non-prelim): 35
length of query: 165
length of database: 10,336,785
effective HSP length: 90
effective length of query: 75
effective length of database: 7,039,095
effective search space: 527932125
effective search space used: 527932125
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 55 (25.9 bits)