BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P24482 (689 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6HV9-B nrPDB 1422 0.0 5VBN-A nrPDB 179 5e-45 6HMF-A nrPDB 32 1.1 6HMS-A nrPDB 32 1.1 1XL4-A nrPDB 31 2.1 4C2X-A nrPDB 30 4.9 4IED-A nrPDB 29 8.6 1T6M-A nrPDB 28 9.0 >6HV9-B nrPDB Length = 689 Score = 1422 bits (3680), Expect = 0.0, Method: Compositional matrix adjust. Identities = 688/689 (99%), Positives = 688/689 (99%) Query: 1 MFGSGNVLPVKIQPPLLRPLAYRVLSRKYGLSIKSDGLSALAEFVGTNIGANWRQGPATI 60 MFGSGNVLPVKIQPPLLRPLAYRVLSRKYGLSIKSDGLSALAEFVGTNIGANWRQGPATI Sbjct: 1 MFGSGNVLPVKIQPPLLRPLAYRVLSRKYGLSIKSDGLSALAEFVGTNIGANWRQGPATI 60 Query: 61 KFLEQFAAVWKQQERGLFIDQSGVKEVIQEMKEREKVEWSHEHPIQHEENILGRTDDDEN 120 KFLEQFAAVWKQQERGLFIDQSGVKEVIQEMKEREKVEWSHEHPIQHEENILGRTDDDEN Sbjct: 61 KFLEQFAAVWKQQERGLFIDQSGVKEVIQEMKEREKVEWSHEHPIQHEENILGRTDDDEN 120 Query: 121 NSDDEMPIAADSSLQNVSLSSPMRQPTERDEYKQPFKPESSKALDWRDYFKVINASQQQR 180 NSDDEMPIAADSSLQNVSLSSPMRQPTERDEYKQPFKPESSKALDWRDYFKVINASQQQR Sbjct: 121 NSDDEMPIAADSSLQNVSLSSPMRQPTERDEYKQPFKPESSKALDWRDYFKVINASQQQR 180 Query: 181 FSYNPHKMQFIFVPNKKQNGLGGIAGFLPDIEDKVQMFLTRYYLTNDRVMRNENFQNSDM 240 FSYNPHKMQFIFVPNKKQNGLGGIAGFLPDIEDKVQMFLTRYYLTNDRVMRNENFQNSDM Sbjct: 181 FSYNPHKMQFIFVPNKKQNGLGGIAGFLPDIEDKVQMFLTRYYLTNDRVMRNENFQNSDM 240 Query: 241 FNPLSSMVSLQNELSNTNRQQQSSSMSITPIKNLLGRDAQNFLLLGLLNKNFKGNWSLED 300 FNPLSSMVSLQNELSNTNRQQQSSS SITPIKNLLGRDAQNFLLLGLLNKNFKGNWSLED Sbjct: 241 FNPLSSMVSLQNELSNTNRQQQSSSNSITPIKNLLGRDAQNFLLLGLLNKNFKGNWSLED 300 Query: 301 PSGSVEIDISQTIPTQGHYYVPGCMVLVEGIYYSVGNKFHVTSMTLPPGERREITLETIG 360 PSGSVEIDISQTIPTQGHYYVPGCMVLVEGIYYSVGNKFHVTSMTLPPGERREITLETIG Sbjct: 301 PSGSVEIDISQTIPTQGHYYVPGCMVLVEGIYYSVGNKFHVTSMTLPPGERREITLETIG 360 Query: 361 NLDLLGIHGISNNNFIARLDKDLKIRLHLLEKELTDHKFVILGANLFLDDLKIMTALSKI 420 NLDLLGIHGISNNNFIARLDKDLKIRLHLLEKELTDHKFVILGANLFLDDLKIMTALSKI Sbjct: 361 NLDLLGIHGISNNNFIARLDKDLKIRLHLLEKELTDHKFVILGANLFLDDLKIMTALSKI 420 Query: 421 LQKLNDDPPTLLIWQGSFTSVPVFASMSSRNISSSTQFKNNFDALATLLSRFDNLTENTT 480 LQKLNDDPPTLLIWQGSFTSVPVFASMSSRNISSSTQFKNNFDALATLLSRFDNLTENTT Sbjct: 421 LQKLNDDPPTLLIWQGSFTSVPVFASMSSRNISSSTQFKNNFDALATLLSRFDNLTENTT 480 Query: 481 MIFIPGPNDLWGSMVSLGASGTLPQDPIPSAFTKKINKVCKNVVWSSNPTRIAYLSQEIV 540 MIFIPGPNDLWGSMVSLGASGTLPQDPIPSAFTKKINKVCKNVVWSSNPTRIAYLSQEIV Sbjct: 481 MIFIPGPNDLWGSMVSLGASGTLPQDPIPSAFTKKINKVCKNVVWSSNPTRIAYLSQEIV 540 Query: 541 IFRDDLSGRFKRHRLEFPFNESEDVYTENDNMMSKDTDIVPIDELVKEPDQLPQKVQETR 600 IFRDDLSGRFKRHRLEFPFNESEDVYTENDNMMSKDTDIVPIDELVKEPDQLPQKVQETR Sbjct: 541 IFRDDLSGRFKRHRLEFPFNESEDVYTENDNMMSKDTDIVPIDELVKEPDQLPQKVQETR 600 Query: 601 KLVKTILDQGHLSPFLDSLRPISWDLDHTLTLCPIPSTMVLCDTTSAQFDLTYNGCKVIN 660 KLVKTILDQGHLSPFLDSLRPISWDLDHTLTLCPIPSTMVLCDTTSAQFDLTYNGCKVIN Sbjct: 601 KLVKTILDQGHLSPFLDSLRPISWDLDHTLTLCPIPSTMVLCDTTSAQFDLTYNGCKVIN 660 Query: 661 PGSFIHNRRARYMEYVPSSKKTIQEEIYI 689 PGSFIHNRRARYMEYVPSSKKTIQEEIYI Sbjct: 661 PGSFIHNRRARYMEYVPSSKKTIQEEIYI 689 >5VBN-A nrPDB Length = 527 Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 138/512 (26%), Positives = 228/512 (44%), Gaps = 88/512 (17%) Query: 159 ESSKALD--WRDYFKVINASQQQRFSYNPHKMQFI--FVPNKKQNGLGGIAGFLPDIEDK 214 E S+++D F +I A RF YN + +F+ + N L G DK Sbjct: 73 ECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHPAPNLFGTP------RDK 126 Query: 215 VQMFLTRYYLTNDRVMRNENFQNSDMFNPLSSMVSLQNELSNTNRQQQSSSMSITPIKNL 274 +MF RY + + R R+E +F P + ++ + S + I+ L Sbjct: 127 AEMFRERYTILHQRTHRHE------LFTP---------PVIGSHPDESGSKFQLKTIETL 171 Query: 275 LGRDAQ--NFLLLGLLNKNFKGNWSLEDPSGSVEIDISQTIPTQGHYYVPGCMVLVEGIY 332 LG + + ++LG++ + +G + LEDP+G+V++D+S+ G Y C VL EG + Sbjct: 172 LGSTTKIGDAIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSG-LYTEACFVLAEGWF 230 Query: 333 YSVGNKFHVTSMTLPPGERREITLETIGNLDLLGIHGISNNNFIARLDKDLKIRLHLLEK 392 FHV + PP E T GN++ G G SN + +L LE+ Sbjct: 231 ED--QVFHVNAFGFPPTEPSSTTRAYYGNINFFG--GPSNTSV------KTSAKLKQLEE 280 Query: 393 ELTDHKFVILGANLFLDDLKIMTALSKILQKLNDDPPTLLIWQGSFTSVPVFASMSSRNI 452 E D FV L ++++LD ++++ L + + PPT I G+F+S P Sbjct: 281 ENKDAMFVFL-SDVWLDQVEVLEKLRIMFAGYSPAPPTCFILCGNFSSAPY-------GK 332 Query: 453 SSSTQFKNNFDALATLLSRFDNLTENTTMIFIPGPNDLWGSMVSLGASGTLPQDPIPSAF 512 + K++ LA ++ + ++ +++ +F+PGP D G LP+ P+ + Sbjct: 333 NQVQALKDSLKTLADIICEYPDIHQSSRFVFVPGPEDP-------GFGSILPRPPLAESI 385 Query: 513 TKKINKVCKNVVWSSNPTRIAYLSQEIVIFRDDLSGRFKRHRLEFPFNESEDVYTENDNM 572 T + + V+++NP RI Y +QEI +FR+DL + R+ + FP S ++ N Sbjct: 386 TNEFRQRVPFSVFTTNPCRIQYCTQEITVFREDLVNKMCRNCVRFP---SSNLAIPN--- 439 Query: 573 MSKDTDIVPIDELVKEPDQLPQKVQETRKLVKTILDQGHLSPFLDSLRPISWDLDHTLTL 632 VKTIL QGHL+P + P+ W D+ L + Sbjct: 440 ----------------------------HFVKTILSQGHLTPLPLYVCPVYWAYDYALRV 471 Query: 633 CPIPSTMVLCDTTSAQFDLTYNGCKVINPGSF 664 P+P +V+ D F T C INPGSF Sbjct: 472 YPVPDLLVIADKYDP-FTTTNTECLCINPGSF 502 >6HMF-A nrPDB Length = 475 Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 12/82 (14%) Query: 460 NNFDALATLLSRFDNLTENTTMIFIPGPNDLWGSMVSLGASGTLPQDPIPSAFTKKINKV 519 + ++ALA LL+ N+ E+ TM PG D A +PQ + K I K+ Sbjct: 282 DQYEALANLLA---NVPEHITMFIGPGNAD--------AARPAIPQPEFYKEYAKPIYKL 330 Query: 520 CKNVVWSSNPTRIAYLSQEIVI 541 KN + SNP I ++ +I Sbjct: 331 -KNAIIISNPAVIRLHGRDFLI 351 >6HMS-A nrPDB Length = 400 Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 12/82 (14%) Query: 460 NNFDALATLLSRFDNLTENTTMIFIPGPNDLWGSMVSLGASGTLPQDPIPSAFTKKINKV 519 + ++ALA LL+ N+ E+ TM PG D A +PQ + K I K+ Sbjct: 207 DQYEALANLLA---NVPEHITMFIGPGNAD--------AARPAIPQPEFYKEYAKPIYKL 255 Query: 520 CKNVVWSSNPTRIAYLSQEIVI 541 KN + SNP I ++ +I Sbjct: 256 -KNAIIISNPAVIRLHGRDFLI 276 >1XL4-A nrPDB Length = 301 Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust. Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 8/85 (9%) Query: 96 KVEWSHEHPIQHEENILGRTDDDENNSDDEMPIAADSSLQNVSLSSPMRQPTERDE---- 151 + W+ HPI H I G TD+ NS E + + + + R DE Sbjct: 209 SLSWTVMHPIDHHSPIYGETDETLRNSHSEFLVLFTGHHEAFAQNVHARHAYSCDEIIWG 268 Query: 152 --YKQPFK--PESSKALDWRDYFKV 172 + F P+ +ALD + ++ Sbjct: 269 GHFVDVFTTLPDGRRALDLGKFHEI 293 >4C2X-A nrPDB Length = 410 Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust. Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 593 PQKVQETRKLVKTILDQGHLSPFLDSLRPISWDL 626 P+ ++ R+L+ T L Q HL+P +D W L Sbjct: 257 PKDIKSVRELINTYLKQFHLAPVMDEEEVAHWFL 290 >4IED-A nrPDB Length = 254 Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Query: 21 AYRVLSRKYGLSIKSDGLSALA---EFVGTNIGANWRQGPATIKFLEQ 65 AY+ L+R+ G +GL+ L + +G+ I W +GP I +EQ Sbjct: 110 AYKKLARELGKERMQEGLNKLNYGNKEIGSEIDKFWLEGPLKISAMEQ 157 >1T6M-A nrPDB Length = 299 Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust. Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 10/101 (9%) Query: 443 VFASMSSRNISSSTQ--FKNNFD-ALATLLSRFDNLTENTTMIFIPGPNDLWGSMVSLGA 499 F + ++N++ + Q +K N+D + ++ D N+ + N L+ + SL + Sbjct: 184 TFTTTVNQNVNVTVQDKYKVNYDEKVKSIKDTMDETMNNSEDL-----NHLYINFTSLSS 238 Query: 500 SGTLPQDPIPSAFTKKINKVCKNVVWSSNPTRIAYLSQEIV 540 GT P + IN N + NPTR+ ++ Q+ + Sbjct: 239 GGTAWNSPY--YYASYINPEIANDIKQKNPTRVGWVIQDYI 277 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6HV9-B nrPDB 1278 0.0 5VBN-A nrPDB 645 0.0 Sequences not found previously or not previously below threshold: 3CE2-A nrPDB 37 0.026 6GMH-U nrPDB 35 0.081 5ZR1-B nrPDB 33 0.54 4OMU-A nrPDB 32 1.0 6QM4-A nrPDB 31 1.3 1XL4-A nrPDB 31 2.0 4IED-A nrPDB 31 2.1 2A1X-A nrPDB 30 2.3 1S7U-A nrPDB 30 2.7 6CGV-U nrPDB 30 3.3 6MP1-A nrPDB 30 3.6 1OJM-A nrPDB 30 3.7 2GVK-A nrPDB 29 6.9 CONVERGED! >6HV9-B nrPDB Length = 689 Score = 1278 bits (3306), Expect = 0.0, Method: Composition-based stats. Identities = 688/689 (99%), Positives = 688/689 (99%) Query: 1 MFGSGNVLPVKIQPPLLRPLAYRVLSRKYGLSIKSDGLSALAEFVGTNIGANWRQGPATI 60 MFGSGNVLPVKIQPPLLRPLAYRVLSRKYGLSIKSDGLSALAEFVGTNIGANWRQGPATI Sbjct: 1 MFGSGNVLPVKIQPPLLRPLAYRVLSRKYGLSIKSDGLSALAEFVGTNIGANWRQGPATI 60 Query: 61 KFLEQFAAVWKQQERGLFIDQSGVKEVIQEMKEREKVEWSHEHPIQHEENILGRTDDDEN 120 KFLEQFAAVWKQQERGLFIDQSGVKEVIQEMKEREKVEWSHEHPIQHEENILGRTDDDEN Sbjct: 61 KFLEQFAAVWKQQERGLFIDQSGVKEVIQEMKEREKVEWSHEHPIQHEENILGRTDDDEN 120 Query: 121 NSDDEMPIAADSSLQNVSLSSPMRQPTERDEYKQPFKPESSKALDWRDYFKVINASQQQR 180 NSDDEMPIAADSSLQNVSLSSPMRQPTERDEYKQPFKPESSKALDWRDYFKVINASQQQR Sbjct: 121 NSDDEMPIAADSSLQNVSLSSPMRQPTERDEYKQPFKPESSKALDWRDYFKVINASQQQR 180 Query: 181 FSYNPHKMQFIFVPNKKQNGLGGIAGFLPDIEDKVQMFLTRYYLTNDRVMRNENFQNSDM 240 FSYNPHKMQFIFVPNKKQNGLGGIAGFLPDIEDKVQMFLTRYYLTNDRVMRNENFQNSDM Sbjct: 181 FSYNPHKMQFIFVPNKKQNGLGGIAGFLPDIEDKVQMFLTRYYLTNDRVMRNENFQNSDM 240 Query: 241 FNPLSSMVSLQNELSNTNRQQQSSSMSITPIKNLLGRDAQNFLLLGLLNKNFKGNWSLED 300 FNPLSSMVSLQNELSNTNRQQQSSS SITPIKNLLGRDAQNFLLLGLLNKNFKGNWSLED Sbjct: 241 FNPLSSMVSLQNELSNTNRQQQSSSNSITPIKNLLGRDAQNFLLLGLLNKNFKGNWSLED 300 Query: 301 PSGSVEIDISQTIPTQGHYYVPGCMVLVEGIYYSVGNKFHVTSMTLPPGERREITLETIG 360 PSGSVEIDISQTIPTQGHYYVPGCMVLVEGIYYSVGNKFHVTSMTLPPGERREITLETIG Sbjct: 301 PSGSVEIDISQTIPTQGHYYVPGCMVLVEGIYYSVGNKFHVTSMTLPPGERREITLETIG 360 Query: 361 NLDLLGIHGISNNNFIARLDKDLKIRLHLLEKELTDHKFVILGANLFLDDLKIMTALSKI 420 NLDLLGIHGISNNNFIARLDKDLKIRLHLLEKELTDHKFVILGANLFLDDLKIMTALSKI Sbjct: 361 NLDLLGIHGISNNNFIARLDKDLKIRLHLLEKELTDHKFVILGANLFLDDLKIMTALSKI 420 Query: 421 LQKLNDDPPTLLIWQGSFTSVPVFASMSSRNISSSTQFKNNFDALATLLSRFDNLTENTT 480 LQKLNDDPPTLLIWQGSFTSVPVFASMSSRNISSSTQFKNNFDALATLLSRFDNLTENTT Sbjct: 421 LQKLNDDPPTLLIWQGSFTSVPVFASMSSRNISSSTQFKNNFDALATLLSRFDNLTENTT 480 Query: 481 MIFIPGPNDLWGSMVSLGASGTLPQDPIPSAFTKKINKVCKNVVWSSNPTRIAYLSQEIV 540 MIFIPGPNDLWGSMVSLGASGTLPQDPIPSAFTKKINKVCKNVVWSSNPTRIAYLSQEIV Sbjct: 481 MIFIPGPNDLWGSMVSLGASGTLPQDPIPSAFTKKINKVCKNVVWSSNPTRIAYLSQEIV 540 Query: 541 IFRDDLSGRFKRHRLEFPFNESEDVYTENDNMMSKDTDIVPIDELVKEPDQLPQKVQETR 600 IFRDDLSGRFKRHRLEFPFNESEDVYTENDNMMSKDTDIVPIDELVKEPDQLPQKVQETR Sbjct: 541 IFRDDLSGRFKRHRLEFPFNESEDVYTENDNMMSKDTDIVPIDELVKEPDQLPQKVQETR 600 Query: 601 KLVKTILDQGHLSPFLDSLRPISWDLDHTLTLCPIPSTMVLCDTTSAQFDLTYNGCKVIN 660 KLVKTILDQGHLSPFLDSLRPISWDLDHTLTLCPIPSTMVLCDTTSAQFDLTYNGCKVIN Sbjct: 601 KLVKTILDQGHLSPFLDSLRPISWDLDHTLTLCPIPSTMVLCDTTSAQFDLTYNGCKVIN 660 Query: 661 PGSFIHNRRARYMEYVPSSKKTIQEEIYI 689 PGSFIHNRRARYMEYVPSSKKTIQEEIYI Sbjct: 661 PGSFIHNRRARYMEYVPSSKKTIQEEIYI 689 >5VBN-A nrPDB Length = 527 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 142/533 (26%), Positives = 236/533 (44%), Gaps = 90/533 (16%) Query: 159 ESSKALD--WRDYFKVINASQQQRFSYNPHKMQFI--FVPNKKQNGLGGIAGFLPDIEDK 214 E S+++D F +I A RF YN + +F+ + N L G DK Sbjct: 73 ECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHPAPNLFGTP------RDK 126 Query: 215 VQMFLTRYYLTNDRVMRNENFQNSDMFNPLSSMVSLQNELSNTNRQQQSSSMSITPIKNL 274 +MF RY + + R R+E +F P + ++ + S + I+ L Sbjct: 127 AEMFRERYTILHQRTHRHE------LFTP---------PVIGSHPDESGSKFQLKTIETL 171 Query: 275 LGRDAQ--NFLLLGLLNKNFKGNWSLEDPSGSVEIDISQTIPTQGHYYVPGCMVLVEGIY 332 LG + + ++LG++ + +G + LEDP+G+V++D+S+ G Y C VL EG + Sbjct: 172 LGSTTKIGDAIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSG-LYTEACFVLAEGWF 230 Query: 333 YSVGNKFHVTSMTLPPGERREITLETIGNLDLLGIHGISNNNFIARLDKDLKIRLHLLEK 392 FHV + PP E T GN++ G G SN + +L LE+ Sbjct: 231 ED--QVFHVNAFGFPPTEPSSTTRAYYGNINFFG--GPSNTSV------KTSAKLKQLEE 280 Query: 393 ELTDHKFVILGANLFLDDLKIMTALSKILQKLNDDPPTLLIWQGSFTSVPVFASMSSRNI 452 E D FV L ++++LD ++++ L + + PPT I G+F+S P Sbjct: 281 ENKDAMFVFL-SDVWLDQVEVLEKLRIMFAGYSPAPPTCFILCGNFSSAPY-------GK 332 Query: 453 SSSTQFKNNFDALATLLSRFDNLTENTTMIFIPGPNDLWGSMVSLGASGTLPQDPIPSAF 512 + K++ LA ++ + ++ +++ +F+PGP D G LP+ P+ + Sbjct: 333 NQVQALKDSLKTLADIICEYPDIHQSSRFVFVPGPEDP-------GFGSILPRPPLAESI 385 Query: 513 TKKINKVCKNVVWSSNPTRIAYLSQEIVIFRDDLSGRFKRHRLEFPFNESEDVYTENDNM 572 T + + V+++NP RI Y +QEI +FR+DL + R+ + FP S ++ N Sbjct: 386 TNEFRQRVPFSVFTTNPCRIQYCTQEITVFREDLVNKMCRNCVRFP---SSNLAIPN--- 439 Query: 573 MSKDTDIVPIDELVKEPDQLPQKVQETRKLVKTILDQGHLSPFLDSLRPISWDLDHTLTL 632 VKTIL QGHL+P + P+ W D+ L + Sbjct: 440 ----------------------------HFVKTILSQGHLTPLPLYVCPVYWAYDYALRV 471 Query: 633 CPIPSTMVLCDTTSAQFDLTYNGCKVINPGSFIHNRRARYMEYVPSSKKTIQE 685 P+P +V+ D F T C INPGSF R + S KT+++ Sbjct: 472 YPVPDLLVIADKYDP-FTTTNTECLCINPGSF--PRSGFSFKVFYPSNKTVED 521 >3CE2-A nrPDB Length = 618 Score = 37.0 bits (84), Expect = 0.026, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 17/138 (12%) Query: 122 SDDEMPI--AADSSLQNVSLSSPM----RQPTERDEYKQPFKPESSKALDWRDYFKVINA 175 SD E+P A DS + LS + Q T+R+ K + + + +R F + Sbjct: 189 SDSEIPFGQATDSEGNSHPLSHALASLYMQSTDRELRKTSYLAQCERYHSYRHTFANLLN 248 Query: 176 SQQQRFSYNPHKMQF-------IFVPNKKQNGLGGIAGFLPDIEDKVQMFLTRYYLTNDR 228 + Q + ++ ++ N + L DI K +T+Y+ R Sbjct: 249 GKIQAHVFYAKNKRYNSCLQAALYHNNIPTT----VYTNLIDIVKKNSSLITKYFSIKQR 304 Query: 229 VMRNENFQNSDMFNPLSS 246 + ++F D++ PLS Sbjct: 305 CLNLKDFHFYDVYAPLSQ 322 >6GMH-U nrPDB Length = 776 Score = 35.5 bits (80), Expect = 0.081, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 25/119 (21%) Query: 70 WKQQERGLFIDQSGVKEVIQEMKEREKVEWSHEHPIQH--EENILGRTDDDEN------- 120 W ++++ DQS E IQ + E+ + S E +Q+ ++ + TDD+E Sbjct: 255 WGREDKS---DQSD-DEKIQNSDDEERAQGSDEDKLQNSDDDEKMQNTDDEERPQLSDDE 310 Query: 121 ----------NSDDEMPIAADSSLQNVSLSSPMRQPTERDEYK-QPFKPESSKALDWRD 168 NSDDE P+A+D+ + + S QP DE K Q E +A D Sbjct: 311 RQQLSEEEKANSDDERPVASDNDDEKQN-SDDEEQPQLSDEEKMQNSDDERPQASDEEH 368 >5ZR1-B nrPDB Length = 620 Score = 32.8 bits (73), Expect = 0.54, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 9/80 (11%) Query: 85 KEVIQEMKEREKVEWSHEHPIQHEENILGRTDDDENNSDDEMPIAADSSLQNVS----LS 140 K I+E +EREK++ + +E+N+ +TDD+ ++ E P A S ++++ + Sbjct: 131 KTGIKEKREREKIQVA---TTTYEDNVTPQTDDNFVSNSPEPPEPATPSKKSLTTNHDFT 187 Query: 141 SPMRQPTERD--EYKQPFKP 158 SP++Q + EYK P Sbjct: 188 SPLKQIIMNNLKEYKDSTSP 207 >4OMU-A nrPDB Length = 283 Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 38/89 (42%), Gaps = 10/89 (11%) Query: 442 PVFASMSSRNISSSTQFKNNFDALATLLSRFDNLTENTTMIFIPGPNDLWGSMVSLGASG 501 P +++R + + Q FD L +++ + ++ P D+ + S +G Sbjct: 143 PQSLVIANRTVEKAEQLAREFDELGPVVA--------SGFAWLQEPVDVIINATSASLAG 194 Query: 502 TLPQDPIPSAFTKKINKVCKNVVWSSNPT 530 LP PI + + VC ++++ PT Sbjct: 195 ELP--PIADSLVEAGRTVCYDMMYGKEPT 221 >6QM4-A nrPDB Length = 735 Score = 31.3 bits (69), Expect = 1.3, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%) Query: 66 FAAVWKQQERGLFIDQSGVKEVIQEMKEREKVEWSH--EHPIQHE 108 F WK+QE L + Q GV+ V + R + EW H E PI E Sbjct: 231 FFEYWKKQEVDLAV-QWGVRGVSSIQQSRPEFEWEHEAEDPITGE 274 >1XL4-A nrPDB Length = 301 Score = 30.9 bits (68), Expect = 2.0, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 15/29 (51%) Query: 97 VEWSHEHPIQHEENILGRTDDDENNSDDE 125 + W+ HPI H I G TD+ NS E Sbjct: 210 LSWTVMHPIDHHSPIYGETDETLRNSHSE 238 >4IED-A nrPDB Length = 254 Score = 30.9 bits (68), Expect = 2.1, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Query: 21 AYRVLSRKYGLSIKSDGLSALA---EFVGTNIGANWRQGPATIKFLEQ 65 AY+ L+R+ G +GL+ L + +G+ I W +GP I +EQ Sbjct: 110 AYKKLARELGKERMQEGLNKLNYGNKEIGSEIDKFWLEGPLKISAMEQ 157 >2A1X-A nrPDB Length = 308 Score = 30.5 bits (67), Expect = 2.3, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 56/146 (38%), Gaps = 30/146 (20%) Query: 538 EIVIFRDDLSGRFKRHRLEFPF--------NESEDVYTENDNMMSKDTDIVPIDELVK-- 587 +I FR++ + R ++ P S+ Y ++ M++K D EL + Sbjct: 47 DIQRFRNEFE-KICRKEVK-PLGLTVMRDVTISKSEYAPSEKMITKVQDFQEDKELFRYC 104 Query: 588 ---------EPDQLPQKVQETRKLVKTILDQGHLSPFLDSLRPISWDLDHTLTLCPI-PS 637 E P + L+ D G + S P+ DL + P PS Sbjct: 105 TLPEILKYVECFTGPNIMAMHTMLINKPPDSGKKT----SRHPLHQDLHY----FPFRPS 156 Query: 638 TMVLCDTTSAQFDLTYNGCKVINPGS 663 +++C T+ + NGC V+ PG+ Sbjct: 157 DLIVCAWTAMEHISRNNGCLVVLPGT 182 >1S7U-A nrPDB Length = 338 Score = 30.5 bits (67), Expect = 2.7, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 15/94 (15%) Query: 37 GLSALAEFVGTNIGANWRQGPATIKF---------LEQFAAVWKQQERGLFI-----DQS 82 G L + G ++G++WR ++F L + W + I +QS Sbjct: 91 GSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQS 150 Query: 83 GVKEVIQEMKEREKVEWSHEHPIQHEENILGRTD 116 G E + E E VEW H + +++ L RTD Sbjct: 151 GAAEHYKAYLEGECVEWLHRY-LKNGNATLLRTD 183 >6CGV-U nrPDB Length = 227 Score = 30.1 bits (66), Expect = 3.3, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 3/90 (3%) Query: 582 IDELVKEPDQLPQKVQETRKLVKTILDQGHLSPFL-DSLRPISWDLDHTLTLCPIPSTMV 640 I+ + P + + + +L+Q ++ ++L P SW P P+T+V Sbjct: 31 INYMSAGPHMISRVNGIRAHRNRILLEQAAITTTPRNNLNPRSWPAALVYQESPAPTTVV 90 Query: 641 LCDTTSAQFDLTYNGCKVINPGSFIHNRRA 670 L A+ +T +G ++ G F H R+ Sbjct: 91 LPRDAQAEVQMTNSGAQL--AGGFRHRVRS 118 >6MP1-A nrPDB Length = 447 Score = 30.1 bits (66), Expect = 3.6, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 15/94 (15%) Query: 37 GLSALAEFVGTNIGANWRQGPATIKF---------LEQFAAVWKQQERGLFI-----DQS 82 G L + G ++G++WR ++F L + W + I +QS Sbjct: 234 GSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQS 293 Query: 83 GVKEVIQEMKEREKVEWSHEHPIQHEENILGRTD 116 G E + E E VEW H + +++ L RTD Sbjct: 294 GAAEHYKAYLEGECVEWLHRY-LKNGNATLLRTD 326 >1OJM-A nrPDB Length = 729 Score = 30.1 bits (66), Expect = 3.7, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 9/89 (10%) Query: 31 LSIKSDGLSALAEFVGTNIGANWRQGPATIKFLEQFAAVWKQQERGLFIDQSGVKEVIQE 90 +S ++D + +F AN AT + LE+ A + D++ V+ V Sbjct: 47 ISSQADRIYLWEKFSNYKTSANL---TATYRKLEEMAKQVTNPSSRYYQDETVVRTV--- 100 Query: 91 MKEREKVEWSHEHPIQHEENILGRTDDDE 119 R+ +EW H+H E++I+G D E Sbjct: 101 ---RDSMEWMHKHVYNSEKSIVGNWWDYE 126 >2GVK-A nrPDB Length = 317 Score = 28.9 bits (63), Expect = 6.9, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 24/136 (17%) Query: 20 LAYRVLSRKYGL-----SIKSDGLSALAEFVGTNIGANWRQGPATIKFLE---------- 64 L + + +++ GL SI + L V G + G A I F++ Sbjct: 109 LLFHIRAKQMGLCFEFASILDEKLKGAVVSVDETHGFRYMDGKAIIGFVDGTENPAVDEN 168 Query: 65 --QFAAVWKQQERGLFIDQSGVKEVIQEMKEREKVEWSHEHPIQHEENILGRTD-DDENN 121 FA + ++ D +G V + + V W+ P++ +E ++GR +D Sbjct: 169 PYHFAVIGEEDA-----DFAGGSYVFVQKYIHDMVAWN-ALPVEQQEKVIGRHKFNDVEL 222 Query: 122 SDDEMPIAADSSLQNV 137 SD+E P A +++ N+ Sbjct: 223 SDEEKPGNAHNAVTNI 238 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.128 0.363 Lambda K H 0.267 0.0380 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,684,342 Number of Sequences: 36641 Number of extensions: 1013351 Number of successful extensions: 2809 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 21 Number of HSP's that attempted gapping in prelim test: 2765 Number of HSP's gapped (non-prelim): 40 length of query: 689 length of database: 10,336,785 effective HSP length: 104 effective length of query: 585 effective length of database: 6,526,121 effective search space: 3817780785 effective search space used: 3817780785 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 62 (28.6 bits)