BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P24228 (477 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2EX6-A nrPDB 941 0.0 3A3I-A nrPDB 418 e-117 1W5D-A nrPDB 136 3e-32 1W79-A nrPDB 119 2e-27 5CED-A nrPDB 40 0.002 5CER-A nrPDB 33 0.40 3V4Y-A nrPDB 31 1.5 5M1C-A nrPDB 30 1.6 1S70-A nrPDB 30 2.1 1D2F-A nrPDB 30 2.2 5YYU-A nrPDB 30 2.5 5J7X-A nrPDB 30 3.1 5E7P-A nrPDB 28 5.9 3WMX-A nrPDB 28 9.9 >2EX6-A nrPDB Length = 458 Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust. Identities = 456/457 (99%), Positives = 456/457 (99%) Query: 21 ANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 80 ANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF Sbjct: 2 ANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 61 Query: 81 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTS 140 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTS Sbjct: 62 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTS 121 Query: 141 IFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTM 200 IFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTM Sbjct: 122 IFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTM 181 Query: 201 FSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILK 260 FSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILK Sbjct: 182 FSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILK 241 Query: 261 DELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH 320 ELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH Sbjct: 242 YELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH 301 Query: 321 ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH 380 ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH Sbjct: 302 ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH 361 Query: 381 DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA 440 DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA Sbjct: 362 DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA 421 Query: 441 FVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 FVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN Sbjct: 422 FVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 458 >3A3I-A nrPDB Length = 453 Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust. Identities = 201/454 (44%), Positives = 308/454 (67%), Gaps = 4/454 (0%) Query: 22 NVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 NV + +LP G+N ++ + + + DY+ LPASTQKV TA+AA + LG F+ Sbjct: 3 NVSDLTQKLPEGSNAGVIAKNINQNQIIADYNGSTFMLPASTQKVFTAVAAKLALGDQFQ 62 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSI 141 F T L + G ++NG L G+L+ F DP L R + +++A LKK G+ +I+G++++DTS+ Sbjct: 63 FETALLSNGKIQNGNLDGNLIVSFTGDPDLTRGQLYSLLAELKKQGIKKINGDLVLDTSV 122 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMF 201 F+SHD+ GW WND+T CF++PPAAA +D NCF L + PG++ I V + +P+ +F Sbjct: 123 FSSHDRGLGWIWNDLTMCFNSPPAAANIDNNCFYAELDANKNPGEIVKINVPAQFPIQVF 182 Query: 202 SQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKD 261 QV S EA YC+LDVV D NR+ + GCL ++ +P L+FAVQ+ +YA AI++ Sbjct: 183 GQVYV--ADSNEAPYCQLDVVVHDNNRYQVKGCLARQYKPFGLSFAVQNTDAYAAAIIQR 240 Query: 262 ELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHA 321 +L++ GI ++G +L Q + G ++A S PL DLLK M+KKSDN IAD++FR + Sbjct: 241 QLRKLGIEFNGKVLL-PQKPQQGQLLAKHLSKPLPDLLKKMMKKSDNQIADSLFRAVAFN 299 Query: 322 RFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHD 381 + P +++ G+ AV+ IL++Q G+ GN+I+ADGSGLSRHNL+AP TM+ VL+YIA+++ Sbjct: 300 YYKRPASFQLGTLAVKSILQKQ-GIRFGNSILADGSGLSRHNLVAPKTMLSVLEYIAKNE 358 Query: 382 NELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 ++L+ + P+AG DG++ R GL + V AKTGSL+GVYNLAGF+T A G+++AF Sbjct: 359 DKLHLMETFPIAGVDGTISGRGGLISPPLVKNVIAKTGSLKGVYNLAGFMTNARGEKVAF 418 Query: 442 VQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQ 475 VQ+++GY+ + + +R PLV+FE LY ++Y+ Sbjct: 419 VQFINGYSTGDLESKTKRAPLVQFERNLYNELYK 452 >1W5D-A nrPDB Length = 462 Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 125/446 (28%), Positives = 209/446 (46%), Gaps = 22/446 (4%) Query: 20 AANVDEYITQLPA--GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLG 77 + +D+ + PA GA + V+ A ++ PAS+ K++TA AAL LG Sbjct: 8 SGQIDKILADHPALEGAMAGITVRSAETGAVLYEHSGDTRMRPASSLKLLTAAAALSVLG 67 Query: 78 PDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLI 137 ++ FTT + T G ++ L G+L + DPTL D M LK SGV I GN++ Sbjct: 68 ENYSFTTEVRTDGTLKGKKLNGNLYLKGKGDPTLLPSDFDKMAEILKHSGVKVIKGNLIG 127 Query: 138 DTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV----DRNCFSVSLYSAP--KPGDMAFIR 191 D + +P PW+D + AP +A D + +V + P K G+ + Sbjct: 128 DDTWHDDMRLSPDMPWSDEYTYYGAPISALTASPNEDYDAGTVIVEVTPNQKEGEEPAVS 187 Query: 192 VASYYPVTMFSQVRTLPRGSAEAQYCELDVV-PGDLNRFTLTGCLPQRSEPLPLAFAVQD 250 V+ P T + ++ + +A +L + N T+ G +P + +V + Sbjct: 188 VS---PKTDYITIKNDAKTTAAGSEKDLTIEREHGTNTITIEGSVPVDANKTKEWISVWE 244 Query: 251 GASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMI 310 A YA + K LK+ GIT G ++ + V+ S +S PL L +K S+N Sbjct: 245 PAGYALDLFKQSLKKQGITVKGD-IKTGEAPSSSDVLLSHRSMPLSKLFVPFMKLSNNGH 303 Query: 311 ADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATM 370 A+ + + +G + G+W G + + L + GVD + ++ DGSG+S + ++ + Sbjct: 304 AEVLVKEMGKVKKG-EGSWEKGLEVLNSTL-PEFGVDSKSLVLRDGSGISHIDAVSSDQL 361 Query: 371 MQVLQYIAQHDNELNFISMLPLAG-----YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVY 425 Q+L I +++ LP+AG G+L+ R + GKV AKTGSL V Sbjct: 362 SQLLYDIQDQSWFSAYLNSLPVAGNPDRMVGGTLRNR--MKGTPAQGKVRAKTGSLSTVS 419 Query: 426 NLAGFITTASGQRMAFVQYLSGYAVE 451 +L+G+ T SG+++ F L+G E Sbjct: 420 SLSGYAETKSGKKLVFSILLNGLIDE 445 >1W79-A nrPDB Length = 489 Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 120/412 (29%), Positives = 185/412 (44%), Gaps = 37/412 (8%) Query: 59 LPASTQKVITALAALIQLGPDFRFTTTLET------KGNVENGVLKGDLVARFGADPTLK 112 LPAS K+ TA AAL LG D F T + +G V++ L G DPTL Sbjct: 46 LPASNMKLFTAAAALEVLGADHSFGTEVAAESAPGRRGEVQDLYLVGR------GDPTLS 99 Query: 113 RQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV--- 169 +D+ M A + SGV + G++ D + F S W D +SA +A V Sbjct: 100 AEDLDAMAAEVAASGVRTVRGDLYADDTWFDSERLVDDWWPEDEPYAYSAQISALTVAHG 159 Query: 170 ---DRNCFSVSLYSAPK--PGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPG 224 D VS+ A + P D+ Y + ++ T GSA + P Sbjct: 160 ERFDTGVTEVSVTPAAEGEPADVDLGAAEGY--AELDNRAVTGAAGSANTLVIDR---PV 214 Query: 225 DLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTL-LRQTQVN-E 282 N +TG LP + P+ V + A+ AG + ++ L+ G+T G + L + + Sbjct: 215 GTNTIAVTGSLPADAAPVTALRTVDEPAALAGHLFEEALESNGVTVKGDVGLGGVPADWQ 274 Query: 283 PGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQ 342 V+A SA L ++L +K S+N A+ + + IG GTW AG V + L Sbjct: 275 DAEVLADHTSAELSEILVPFMKFSNNGHAEMLVKSIGQETAGA-GTWDAGLVGVEEAL-S 332 Query: 343 QAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYD-----G 397 GVD ++ DGSGLSR NL+ T++ +L + + LP+AG G Sbjct: 333 GLGVDTAGLVLNDGSGLSRGNLVTADTVVDLLGQAGSAPWAQTWSASLPVAGESDPFVGG 392 Query: 398 SLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYA 449 +L R + +G V AKTG++ GV L+G++ G+ +AF +G++ Sbjct: 393 TLANR--MRGTAAEGVVEAKTGTMSGVSALSGYVPGPEGE-LAFSIVNNGHS 441 >5CED-A nrPDB Length = 446 Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 24/168 (14%) Query: 279 QVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQ 338 Q NE T + SAPL +LK M +S+N IAD ++ +G G++A Sbjct: 225 QKNEKSTTMVL-MSAPLKTILKRMNNQSNNYIADNLYWNLG------------GTEAFNA 271 Query: 339 ILRQQAGVDIGNTIIADGSGLSRHNLIAP----ATMMQVLQYIAQHDNEL-----NFISM 389 + + D + +GSG + ++ P AT +++ + D L + + Sbjct: 272 YIAGKMQADTSDIEFHNGSGNNEGSVAKPVYNEATCEMMIKVLYSLDKSLSAKGYDLSDV 331 Query: 390 LPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQ 437 + +A D + G + + G +AKTGS+ L G ++T +G+ Sbjct: 332 MAVAAKDKA--STVGSYGGVMAGSTTAKTGSVNKAKTLMGSVSTKNGE 377 Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 AS KV+T L A+ +LGPD+RF T L NG D+ DP R ++ Sbjct: 69 ASISKVVTTLWAVDRLGPDYRFKTKLHVTPTA-NGSY--DIHIEGSRDPLFGRNMSYFLI 125 Query: 121 ATLKKSGVNQID 132 + L + + +I+ Sbjct: 126 SELNRMKITKIE 137 >5CER-A nrPDB Length = 401 Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 29/165 (17%) Query: 284 GTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQ 343 G+VV QSAPL +LK M +S+N IAD ++ +G G+ A Sbjct: 194 GSVVL--QSAPLRTILKRMNNQSNNYIADNLYWNLG------------GTAAFNAFAAAT 239 Query: 344 AGVDIGNTIIADGSGLSR-------HNLIAPATMMQVL----QYIAQHDNELNFISMLPL 392 D + +GSG + +N TM++ L + + +L+ + + Sbjct: 240 LKADQNQIVFHNGSGNNEGTTAKPIYNEATCETMIKTLYTLNKSLEAKGYKLSDVLSVAN 299 Query: 393 AGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQ 437 D ++ G G + AKTG++ LAG I+T G+ Sbjct: 300 KDSDSTIDNFGG----NAAGSMIAKTGTVNKAKTLAGSISTKEGE 340 Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 9/89 (10%) Query: 56 QMALP-ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQ 114 Q P A+ KVIT L A+ +LG D+R T L NG + DL DP R Sbjct: 26 QKKFPLAAISKVITTLWAIEKLGVDYRHKTVLHLTPTA-NGSM--DLHVEGSRDPIFGRN 82 Query: 115 DIRNMVATLKKSGVNQI-----DGNVLID 138 +++ L + V +I D N L+D Sbjct: 83 LSYFLISELNRMKVTKIENLTFDENFLLD 111 >3V4Y-A nrPDB Length = 306 Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust. Identities = 15/39 (38%), Positives = 17/39 (43%) Query: 153 WNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIR 191 W T CF+ P AAIVD F +P M IR Sbjct: 148 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIR 186 >5M1C-A nrPDB Length = 517 Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust. Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%) Query: 201 FSQVRTLPRGSAEAQYCELDVVPGD---LNRFTLTGCLPQRSEPL 242 F QV +P C+ +V GD LNR + C P+ + PL Sbjct: 134 FKQVLNMPTKRLRGAPCQQKIVSGDDVDLNRIPIMTCWPEDAAPL 178 >1S70-A nrPDB Length = 330 Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust. Identities = 15/39 (38%), Positives = 17/39 (43%) Query: 153 WNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIR 191 W T CF+ P AAIVD F +P M IR Sbjct: 151 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIR 189 >1D2F-A nrPDB Length = 390 Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 12/99 (12%) Query: 286 VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVP-GTWRAGSD---------A 335 + A +Q AP D L+I LK + IAD + + +P T+ A D A Sbjct: 278 IAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNA 337 Query: 336 VRQILRQQAGVDI--GNTIIADGSGLSRHNLIAPATMMQ 372 +++ L +Q V I G T +G G R N P + ++ Sbjct: 338 LQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLE 376 >5YYU-A nrPDB Length = 112 Score = 30.0 bits (66), Expect = 2.5, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 28/58 (48%) Query: 345 GVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYR 402 GV++G +A + A + V+ + Q +N N++S LAG DG LQ R Sbjct: 23 GVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR 80 >5J7X-A nrPDB Length = 549 Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 5/48 (10%) Query: 234 CLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVN 281 CLP R + L + V+D YA D L + +T+ G +QT N Sbjct: 219 CLPMRQQELHAGYQVKDKGEYA-----DYLAECALTFGGLEYQQTPKN 261 >5E7P-A nrPDB Length = 745 Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust. Identities = 12/20 (60%), Positives = 14/20 (70%) Query: 267 GITWSGTLLRQTQVNEPGTV 286 GITW+ LL T V+ PGTV Sbjct: 170 GITWTSELLTVTAVDPPGTV 189 >3WMX-A nrPDB Length = 358 Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust. Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 4/52 (7%) Query: 111 LKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWN-DMTQCFS 161 L D + +++ G+ Q+ L+ ++ A+ +KAP W WN +MT + Sbjct: 73 LNATDRGELATVVERHGITQV---YLLAAALSATGEKAPQWAWNLNMTSLLN 121 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2EX6-A nrPDB 734 0.0 3A3I-A nrPDB 653 0.0 1W5D-A nrPDB 525 e-149 1W79-A nrPDB 450 e-127 Sequences not found previously or not previously below threshold: 5CED-A nrPDB 70 2e-12 5CER-A nrPDB 64 9e-11 5TFQ-A nrPDB 46 3e-05 5GWA-A nrPDB 39 0.003 3L07-A nrPDB 34 0.22 4K91-A nrPDB 33 0.27 1E25-A nrPDB 33 0.35 5M1C-A nrPDB 33 0.35 4GI8-A nrPDB 32 0.42 2HB6-A nrPDB 31 1.6 4ATY-A nrPDB 30 2.2 5HHL-A nrPDB 30 2.6 4RYE-A nrPDB 28 8.1 >2EX6-A nrPDB Length = 458 Score = 734 bits (1895), Expect = 0.0, Method: Composition-based stats. Identities = 456/457 (99%), Positives = 456/457 (99%) Query: 21 ANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 80 ANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF Sbjct: 2 ANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 61 Query: 81 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTS 140 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTS Sbjct: 62 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTS 121 Query: 141 IFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTM 200 IFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTM Sbjct: 122 IFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTM 181 Query: 201 FSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILK 260 FSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILK Sbjct: 182 FSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILK 241 Query: 261 DELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH 320 ELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH Sbjct: 242 YELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH 301 Query: 321 ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH 380 ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH Sbjct: 302 ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH 361 Query: 381 DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA 440 DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA Sbjct: 362 DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA 421 Query: 441 FVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 FVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN Sbjct: 422 FVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 458 >3A3I-A nrPDB Length = 453 Score = 653 bits (1685), Expect = 0.0, Method: Composition-based stats. Identities = 201/454 (44%), Positives = 308/454 (67%), Gaps = 4/454 (0%) Query: 22 NVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 NV + +LP G+N ++ + + + DY+ LPASTQKV TA+AA + LG F+ Sbjct: 3 NVSDLTQKLPEGSNAGVIAKNINQNQIIADYNGSTFMLPASTQKVFTAVAAKLALGDQFQ 62 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSI 141 F T L + G ++NG L G+L+ F DP L R + +++A LKK G+ +I+G++++DTS+ Sbjct: 63 FETALLSNGKIQNGNLDGNLIVSFTGDPDLTRGQLYSLLAELKKQGIKKINGDLVLDTSV 122 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMF 201 F+SHD+ GW WND+T CF++PPAAA +D NCF L + PG++ I V + +P+ +F Sbjct: 123 FSSHDRGLGWIWNDLTMCFNSPPAAANIDNNCFYAELDANKNPGEIVKINVPAQFPIQVF 182 Query: 202 SQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKD 261 QV S EA YC+LDVV D NR+ + GCL ++ +P L+FAVQ+ +YA AI++ Sbjct: 183 GQVYV--ADSNEAPYCQLDVVVHDNNRYQVKGCLARQYKPFGLSFAVQNTDAYAAAIIQR 240 Query: 262 ELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHA 321 +L++ GI ++G +L Q + G ++A S PL DLLK M+KKSDN IAD++FR + Sbjct: 241 QLRKLGIEFNGKVLL-PQKPQQGQLLAKHLSKPLPDLLKKMMKKSDNQIADSLFRAVAFN 299 Query: 322 RFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHD 381 + P +++ G+ AV+ IL++Q G+ GN+I+ADGSGLSRHNL+AP TM+ VL+YIA+++ Sbjct: 300 YYKRPASFQLGTLAVKSILQKQ-GIRFGNSILADGSGLSRHNLVAPKTMLSVLEYIAKNE 358 Query: 382 NELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 ++L+ + P+AG DG++ R GL + V AKTGSL+GVYNLAGF+T A G+++AF Sbjct: 359 DKLHLMETFPIAGVDGTISGRGGLISPPLVKNVIAKTGSLKGVYNLAGFMTNARGEKVAF 418 Query: 442 VQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQ 475 VQ+++GY+ + + +R PLV+FE LY ++Y+ Sbjct: 419 VQFINGYSTGDLESKTKRAPLVQFERNLYNELYK 452 >1W5D-A nrPDB Length = 462 Score = 525 bits (1353), Expect = e-149, Method: Composition-based stats. Identities = 125/447 (27%), Positives = 209/447 (46%), Gaps = 22/447 (4%) Query: 20 AANVDEYITQLPA--GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLG 77 + +D+ + PA GA + V+ A ++ PAS+ K++TA AAL LG Sbjct: 8 SGQIDKILADHPALEGAMAGITVRSAETGAVLYEHSGDTRMRPASSLKLLTAAAALSVLG 67 Query: 78 PDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLI 137 ++ FTT + T G ++ L G+L + DPTL D M LK SGV I GN++ Sbjct: 68 ENYSFTTEVRTDGTLKGKKLNGNLYLKGKGDPTLLPSDFDKMAEILKHSGVKVIKGNLIG 127 Query: 138 DTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV----DRNCFSVSLYSAP--KPGDMAFIR 191 D + +P PW+D + AP +A D + +V + P K G+ + Sbjct: 128 DDTWHDDMRLSPDMPWSDEYTYYGAPISALTASPNEDYDAGTVIVEVTPNQKEGEEPAVS 187 Query: 192 VASYYPVTMFSQVRTLPRGSAEAQYCELDVV-PGDLNRFTLTGCLPQRSEPLPLAFAVQD 250 V+ P T + ++ + +A +L + N T+ G +P + +V + Sbjct: 188 VS---PKTDYITIKNDAKTTAAGSEKDLTIEREHGTNTITIEGSVPVDANKTKEWISVWE 244 Query: 251 GASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMI 310 A YA + K LK+ GIT G ++ + V+ S +S PL L +K S+N Sbjct: 245 PAGYALDLFKQSLKKQGITVKGD-IKTGEAPSSSDVLLSHRSMPLSKLFVPFMKLSNNGH 303 Query: 311 ADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATM 370 A+ + + +G + G+W G + + L + GVD + ++ DGSG+S + ++ + Sbjct: 304 AEVLVKEMGKVKKG-EGSWEKGLEVLNSTL-PEFGVDSKSLVLRDGSGISHIDAVSSDQL 361 Query: 371 MQVLQYIAQHDNELNFISMLPLAG-----YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVY 425 Q+L I +++ LP+AG G+L+ R + GKV AKTGSL V Sbjct: 362 SQLLYDIQDQSWFSAYLNSLPVAGNPDRMVGGTLRNR--MKGTPAQGKVRAKTGSLSTVS 419 Query: 426 NLAGFITTASGQRMAFVQYLSGYAVEP 452 +L+G+ T SG+++ F L+G E Sbjct: 420 SLSGYAETKSGKKLVFSILLNGLIDEE 446 >1W79-A nrPDB Length = 489 Score = 450 bits (1158), Expect = e-127, Method: Composition-based stats. Identities = 124/450 (27%), Positives = 195/450 (43%), Gaps = 38/450 (8%) Query: 22 NVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 80 ++D + GA ++V + LPAS K+ TA AAL LG D Sbjct: 8 DIDAILEDPALEGAVSGVVVVDTATGEELYSRDGGEQLLPASNMKLFTAAAALEVLGADH 67 Query: 81 RFTTTLET------KGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGN 134 F T + +G V++ L G DPTL +D+ M A + SGV + G+ Sbjct: 68 SFGTEVAAESAPGRRGEVQDLYLVGR------GDPTLSAEDLDAMAAEVAASGVRTVRGD 121 Query: 135 VLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV------DRNCFSVSLYSAP--KPGD 186 + D + F S W D +SA +A V D VS+ A +P D Sbjct: 122 LYADDTWFDSERLVDDWWPEDEPYAYSAQISALTVAHGERFDTGVTEVSVTPAAEGEPAD 181 Query: 187 MAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAF 246 + Y + ++ T GSA + P N +TG LP + P+ Sbjct: 182 VDLGAAEGY--AELDNRAVTGAAGSANTLVIDR---PVGTNTIAVTGSLPADAAPVTALR 236 Query: 247 AVQDGASYAGAILKDELKQAGITWSGTL-LRQTQVN-EPGTVVASKQSAPLHDLLKIMLK 304 V + A+ AG + ++ L+ G+T G + L + + V+A SA L ++L +K Sbjct: 237 TVDEPAALAGHLFEEALESNGVTVKGDVGLGGVPADWQDAEVLADHTSAELSEILVPFMK 296 Query: 305 KSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNL 364 S+N A+ + + IG GTW AG V + L GVD ++ DGSGLSR NL Sbjct: 297 FSNNGHAEMLVKSIGQETAGA-GTWDAGLVGVEEAL-SGLGVDTAGLVLNDGSGLSRGNL 354 Query: 365 IAPATMMQVLQYIAQHDNELNFISMLPLAG-----YDGSLQYRAGLHQAGVDGKVSAKTG 419 + T++ +L + + LP+AG G+L R + +G V AKTG Sbjct: 355 VTADTVVDLLGQAGSAPWAQTWSASLPVAGESDPFVGGTLANR--MRGTAAEGVVEAKTG 412 Query: 420 SLQGVYNLAGFITTASGQRMAFVQYLSGYA 449 ++ GV L+G++ G+ +AF +G++ Sbjct: 413 TMSGVSALSGYVPGPEGE-LAFSIVNNGHS 441 >5CED-A nrPDB Length = 446 Score = 69.8 bits (169), Expect = 2e-12, Method: Composition-based stats. Identities = 76/446 (17%), Positives = 149/446 (33%), Gaps = 87/446 (19%) Query: 39 MVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLK 98 M D + AS KV+T L A+ +LGPD+RF T L Sbjct: 47 MAANSKTQQIQGDDNKDDKFPLASISKVVTTLWAVDRLGPDYRFKTKLHVTPTANGSY-- 104 Query: 99 GDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQ 158 D+ DP R +++ L + + +I+ + W + Sbjct: 105 -DIHIEGSRDPLFGRNMSYFLISELNRMKITKIEKLTF-------DENFLLAWLAEEKPM 156 Query: 159 CFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE 218 P V+ + + + S + + T+ + A + Sbjct: 157 IGGTTPKYDTVE------------QQASIVRATLTSSFATAISPGYYTILKTKAARIGVQ 204 Query: 219 LDVVP-GDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQ 277 + P D+ + +K+A + Sbjct: 205 MSNRPKIDVRTISF-------------------------------VKKA----------E 223 Query: 278 TQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVR 337 Q NE T + SAPL +LK M +S+N IAD ++ +G G++A Sbjct: 224 FQKNEKSTTMVL-MSAPLKTILKRMNNQSNNYIADNLYWNLG------------GTEAFN 270 Query: 338 QILRQQAGVDIGNTIIADGSGLSRHNLIAP-------ATMMQVLQYIAQHDNELNFISML 390 + + D + +GSG + ++ P M++VL + + + + Sbjct: 271 AYIAGKMQADTSDIEFHNGSGNNEGSVAKPVYNEATCEMMIKVLYSLDKSLSAKGYDLSD 330 Query: 391 PLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV 450 +A G + + G +AKTGS+ L G ++T +G+ + F + + Sbjct: 331 VMAVAAKDKASTVGSYGGVMAGSTTAKTGSVNKAKTLMGSVSTKNGE-IYFAVLM--HTD 387 Query: 451 EPADQRNRRIPLVRFESRLYKDIYQN 476 + + + + ++++ + I QN Sbjct: 388 YDKSRSDWGVASQQIKNKVSQLINQN 413 >5CER-A nrPDB Length = 401 Score = 64.4 bits (155), Expect = 9e-11, Method: Composition-based stats. Identities = 87/430 (20%), Positives = 142/430 (33%), Gaps = 95/430 (22%) Query: 42 KVGASAPAIDYHSQ-QMALP-ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKG 99 K A+A ++ Q P A+ KVIT L A+ +LG D+R T L + Sbjct: 11 KAAATAGKVEGEGDMQKKFPLAAISKVITTLWAIEKLGVDYRHKTVLHLTPTANGSM--- 67 Query: 100 DLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQC 159 DL DP R +++ L + V +I+ N+ D + W + + Sbjct: 68 DLHVEGSRDPIFGRNLSYFLISELNRMKVTKIE-NLTFDENFL------LDWLAEESPRI 120 Query: 160 FSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCEL 219 P +++ +V FS A Y +L Sbjct: 121 GGVTPRYETIEQQAEAVI-----------------KNLKESFSTAIN------RAMYSKL 157 Query: 220 DVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQ 279 F L +P + + K+ K+ T Sbjct: 158 RERATKAKVFMLE-------KPTIEVRNI-------SFLPKNNYKKDKYT---------- 193 Query: 280 VNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQI 339 G+VV QSAPL +LK M +S+N IAD ++ +G G+ A Sbjct: 194 ----GSVVL--QSAPLRTILKRMNNQSNNYIADNLYWNLG------------GTAAFNAF 235 Query: 340 LRQQAGVDIGNTIIADGSGLSRHNLIAP-------ATMMQVLQYIAQHDNELNF--ISML 390 D + +GSG + P TM++ L + + + +L Sbjct: 236 AAATLKADQNQIVFHNGSGNNEGTTAKPIYNEATCETMIKTLYTLNKSLEAKGYKLSDVL 295 Query: 391 PLAGYDG--SLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGY 448 +A D ++ G G + AKTG++ LAG I+T G+ F L + Sbjct: 296 SVANKDSDSTIDNFGG----NAAGSMIAKTGTVNKAKTLAGSISTKEGE-FYFAILL--H 348 Query: 449 AVEPADQRNR 458 +R Sbjct: 349 TDMDQSSSDR 358 >5TFQ-A nrPDB Length = 280 Score = 45.9 bits (107), Expect = 3e-05, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 60/173 (34%), Gaps = 25/173 (14%) Query: 295 LHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNT--- 351 L +LLK + KSDN D + +G G D V + ++ G+ N Sbjct: 101 LGELLKYTISKSDNNTCDILIEYVG------------GIDQVNEYVKS-LGIKDCNLAAT 147 Query: 352 -IIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQA-G 409 + SG + N P ++++L + A + + L Sbjct: 148 ETLMHTSGDTDLNWSTPEEVVRLLNIADKQPLFGTQYKDFLQAIMQETSTGKDKLKGQLP 207 Query: 410 VDGKVSAKTGS-------LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQ 455 D V KTGS ++ N AGF+ +GQ+ ++ AD Sbjct: 208 ADVIVGHKTGSSDRTPEGIKIADNDAGFVILPNGQKYYIAVFVMESQETDADN 260 >5GWA-A nrPDB Length = 280 Score = 39.4 bits (90), Expect = 0.003, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 72/213 (33%), Gaps = 34/213 (15%) Query: 254 YAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAP-------LHDLLKIMLKKS 306 A A+L D+L + I+ L + +P T K P +++K + S Sbjct: 53 LALAVL-DKLDKENISVDKKLFVKKSDLQPNTWSPLKDKYPNGNLELSFSEIIKSTVSHS 111 Query: 307 DNMIADTVFRMIG-----HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSR 361 DN D +FR +G H + G A + + + V Sbjct: 112 DNNGCDILFRFVGGTNKVHNFISKLGVKNISIKATEEEMHKAWNVQYT------------ 159 Query: 362 HNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSA-KTGS 420 N P +Q+L+ +++ L + L DG V A KTGS Sbjct: 160 -NWTTPDATVQLLKKFYKNEILSKNSYDFLLNTMIETTTGPKRLKGLLPDGTVVAHKTGS 218 Query: 421 -------LQGVYNLAGFITTASGQRMAFVQYLS 446 + N G IT +G+ A Y+S Sbjct: 219 SDTNNKGITAATNDIGIITLPNGKHFAIAVYVS 251 >3L07-A nrPDB Length = 285 Score = 33.6 bits (75), Expect = 0.22, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 9/86 (10%) Query: 63 TQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVAT 122 +Q ++ A A + RFTT L++ K D++ P D+ A Sbjct: 178 SQLLLNAKATVTTC---HRFTTDLKSHTT------KADILIVAVGKPNFITADMVKEGAV 228 Query: 123 LKKSGVNQIDGNVLIDTSIFASHDKA 148 + G+N +DG ++ D A DK Sbjct: 229 VIDVGINHVDGKIVGDVDFAAVKDKV 254 >4K91-A nrPDB Length = 346 Score = 33.2 bits (74), Expect = 0.27, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 19/42 (45%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 P A + ++ + ++ + Q PAS K++TA A Sbjct: 10 PQLAAKSYVLMDGESGQVLVENNGDQRLPPASLTKLMTAYIA 51 >1E25-A nrPDB Length = 282 Score = 32.8 bits (73), Expect = 0.35, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 65/223 (29%), Gaps = 26/223 (11%) Query: 260 KDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319 K +L Q I +L+ T + S P+ LL+ + SDN+ D +F ++G Sbjct: 63 KLDLNQTVIVNRAKVLQNTWAPIMKAYQGDEFSVPVQQLLQYSVSHSDNVACDLLFELVG 122 Query: 320 -----HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVL 374 H G A + V N G A + + Sbjct: 123 GPAALHDYIQSMGIKETAVVANEAQMHADDQVQYQNWTSMKG---------AAEILKKFE 173 Query: 375 QYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQ------GVYNLA 428 Q + + + G + + L V+ KTG+ Q N Sbjct: 174 QKTQLSETSQALLWKWMVETTTGPERLKGLL---PAGTVVAHKTGTSQIKAGKTAATNDL 230 Query: 429 GFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYK 471 G I G+ + ++ R + + Y+ Sbjct: 231 GIILLPDGRPLLVAVFVK---DSAESSRTNEAIIAQVAQTAYQ 270 >5M1C-A nrPDB Length = 517 Score = 32.8 bits (73), Expect = 0.35, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 3/66 (4%) Query: 183 KPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGD---LNRFTLTGCLPQRS 239 K + + + F QV +P C+ +V GD LNR + C P+ + Sbjct: 116 KEPEPPKGFRDLFDKLPQFKQVLNMPTKRLRGAPCQQKIVSGDDVDLNRIPIMTCWPEDA 175 Query: 240 EPLPLA 245 PL Sbjct: 176 APLITW 181 >4GI8-A nrPDB Length = 557 Score = 32.4 bits (72), Expect = 0.42, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 6/52 (11%) Query: 112 KRQDIRNMVATLKKSGVNQIDGNVLIDTS-----IFASHDKAPGWPWNDMTQ 158 +D ++A LKK G+ + +V+I+ S F S + P+ D Sbjct: 78 TMEDFDRLMAELKKRGMRLMV-DVVINHSSDQHEWFKSSRASKDNPYRDYYF 128 >2HB6-A nrPDB Length = 491 Score = 30.5 bits (67), Expect = 1.6, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 24/42 (57%) Query: 92 VENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDG 133 ++ G GDLVA P L D+++ +A +K S + ++DG Sbjct: 390 IKAGKASGDLVAPMLFAPDLFFGDLKSSIADMKNSNLGKMDG 431 >4ATY-A nrPDB Length = 349 Score = 30.1 bits (66), Expect = 2.2, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 19/115 (16%) Query: 261 DELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH 320 +L+ G+T G + ++ + P D+ M D R H Sbjct: 251 RKLRDDGMTVIG--------PQGADLLLTN---PDIDVFVAM--YHDQGHIPVKLRAGRH 297 Query: 321 ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSG-LSRHNLIAPATMMQVL 374 + G+ + + +G DI T++AD + L L+ T++ L Sbjct: 298 S-----AALSIGAGVLFSSVGHGSGFDIAGTLLADPAPLLGAIRLVTTGTVLAPL 347 >5HHL-A nrPDB Length = 292 Score = 29.7 bits (65), Expect = 2.6, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 56/160 (35%), Gaps = 3/160 (1%) Query: 259 LKDELKQAGITWSGTLLRQTQVNEPG-TVVASKQSAPLHDLLKIML--KKSDNMIADTVF 315 LK+ L + G T G L + +P V K + +L + + IA + Sbjct: 40 LKEHLAKNGETIKGQLRTRKYKPQPARRVEIPKPDGGVRNLGVPTVTDRFIQQAIAQVLT 99 Query: 316 RMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQ 375 + + +R A + IL ++ GN I D + + +M ++ Sbjct: 100 PIYEEQFHDHSYGFRPNRCAQQAILTALNIMNDGNDWIVDIDLEKFFDTVNHDKLMTLIG 159 Query: 376 YIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVS 415 + + ++ + ++G +Y + G +S Sbjct: 160 RTIKDGDVISIVRKYLVSGIMIDDEYEDSIVGTPQGGNLS 199 >4RYE-A nrPDB Length = 269 Score = 28.2 bits (61), Expect = 8.1, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 20/47 (42%) Query: 30 LPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQL 76 +P G +V + + PAST KV+ AL AL +L Sbjct: 15 IPDGPAQTWIVADLDSGQVLAGRDQNVAHPPASTIKVLLALVALDEL 61 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.305 0.125 0.307 Lambda K H 0.267 0.0385 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,039,835 Number of Sequences: 36641 Number of extensions: 532496 Number of successful extensions: 1601 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 1547 Number of HSP's gapped (non-prelim): 39 length of query: 477 length of database: 10,336,785 effective HSP length: 101 effective length of query: 376 effective length of database: 6,636,044 effective search space: 2495152544 effective search space used: 2495152544 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 61 (28.2 bits)