BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P23919 (212 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1E2Q-A nrPDB 433 e-122 2W0S-A nrPDB 167 2e-42 2TMK-A nrPDB 161 2e-40 2WWH-A nrPDB 161 2e-40 5UIV-A nrPDB 146 6e-36 4S35-A nrPDB 77 5e-15 3HJN-A nrPDB 72 2e-13 3LV8-A nrPDB 59 1e-09 5X7J-A nrPDB 58 3e-09 4TMK-A nrPDB 55 2e-08 3UWO-A nrPDB 53 1e-07 5NRN-A nrPDB 50 5e-07 3V9P-A nrPDB 50 7e-07 3LD9-A nrPDB 47 8e-06 4RZX-A nrPDB 37 0.005 1P9N-A nrPDB 30 1.0 4NTZ-A nrPDB 29 1.1 5KWG-C nrPDB 29 1.2 4AEZ-A nrPDB 29 1.2 1N8Y-C nrPDB 29 1.4 2C9Y-A nrPDB 29 1.4 3OKS-A nrPDB 29 1.9 2AK2-A nrPDB 28 2.5 5WP9-A nrPDB 28 2.8 3NXS-A nrPDB 28 2.9 4BEJ-A nrPDB 28 2.9 4JYC-A nrPDB 28 3.7 5J32-A nrPDB 28 3.8 5CB6-A nrPDB 28 4.2 1TEV-A nrPDB 27 4.8 2YVU-A nrPDB 27 6.1 4O0M-A nrPDB 27 9.2 >1E2Q-A nrPDB Length = 215 Score = 433 bits (1113), Expect = e-122, Method: Compositional matrix adjust. Identities = 211/212 (99%), Positives = 211/212 (99%) Query: 1 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKK 60 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKK Sbjct: 4 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKK 63 Query: 61 SDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQP 120 SDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQP Sbjct: 64 SDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQP 123 Query: 121 DVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDA 180 DVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDA Sbjct: 124 DVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDA 183 Query: 181 SKSIEAVHEDIRVLSEDAIRTATEKPLGELWK 212 SKSIEAVHEDIRVLSEDAI TATEKPLGELWK Sbjct: 184 SKSIEAVHEDIRVLSEDAIATATEKPLGELWK 215 >2W0S-A nrPDB Length = 204 Score = 167 bits (424), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 86/207 (41%), Positives = 134/207 (64%), Gaps = 6/207 (2%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64 RGALIV EG+D++GK+TQ ++E++ A + + L FP+RST GK++ YL +K Sbjct: 3 RGALIVFEGLDKSGKTTQCMNIMESIPA--NTIKYLNFPQRSTVTGKMIDDYLTRKKTYN 60 Query: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 124 DH V+LLF ANRWE I+E+L QG+TL+VDRYAFSGVA+ AK S+ K + GL Sbjct: 61 DHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAK-GASMTLSKSYESGL 119 Query: 125 PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSI 184 PKPDLV+FL+ + + G E YE+ FQ++ L+ + +++++ ++W+++ + Sbjct: 120 PKPDLVIFLESGSKEINRN--VGEEIYEDVTFQQKVLQEYKKMIEEGDIHWQIISSEFEE 177 Query: 185 EAVHEDIRVLSEDAIRTATEKPLGELW 211 + E I+ + +AI T T P+G+LW Sbjct: 178 DVKKELIKNIVIEAIHTVT-GPVGQLW 203 >2TMK-A nrPDB Length = 216 Score = 161 bits (408), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 85/168 (50%), Positives = 110/168 (65%), Gaps = 7/168 (4%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKS-DV 63 RG LI++EG+DR GK+TQ L + L +LL+FPERST IG L++ YL S + Sbjct: 4 RGKLILIEGLDRTGKTTQCNILYKKLQP---NCKLLKFPERSTRIGGLINEYLTDDSFQL 60 Query: 64 EDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAK--ENFSLDWCKQPD 121 D ++HLLFSANRWE V IK+ L +G +V+DRY +SGVA++ AK LDWC QPD Sbjct: 61 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD 120 Query: 122 VGLPKPDLVLFLQLQLAD-AAKRGAFGHERYENGAFQERALRCFHQLM 168 VGL KPDL LFL Q D A++ FG ERYE FQE+ + F +L+ Sbjct: 121 VGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLL 168 >2WWH-A nrPDB Length = 212 Score = 161 bits (407), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 77/188 (40%), Positives = 113/188 (60%), Gaps = 2/188 (1%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDV 63 ++G IV EG+DR+GKSTQS+ LVE L + L FP R T IG+++S YL+ ++ + Sbjct: 8 KKGKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHLYFPNRETGIGQIISKYLKMENSM 67 Query: 64 EDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVG 123 + ++HLLFSANRWE + IK L +G+ +V DRYA+SGVA++ N + WC PD G Sbjct: 68 SNETIHLLFSANRWEHMNEIKSLLLKGIWVVCDRYAYSGVAYSSGALNLNKTWCMNPDQG 127 Query: 124 LPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKS 183 L KPD+V +L + A R +G E YE Q++ + + W +DA++ Sbjct: 128 LIKPDVVFYLNVPPNYAQNRSDYGEEIYEKVETQKKIYETYKHFAHEDY--WINIDATRK 185 Query: 184 IEAVHEDI 191 IE +H DI Sbjct: 186 IEDIHNDI 193 >5UIV-A nrPDB Length = 227 Score = 146 bits (369), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 88/229 (38%), Positives = 136/229 (59%), Gaps = 39/229 (17%) Query: 2 AARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKS 61 + RG LI++EG+DR+GKSTQ+ L L + +L++FP+RST IGKL++ YL KS Sbjct: 3 TSARGQLILIEGLDRSGKSTQASILSTKLSPS----KLIKFPDRSTPIGKLINEYLTNKS 58 Query: 62 -DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENF-------- 112 + D + HLLFSANRWE I++ L+QG +++DRY +SG+A+T AK +F Sbjct: 59 FTLSDQAAHLLFSANRWELSQQIQDLLNQGYFIILDRYIYSGIAYTLAKNDFHDETISQG 118 Query: 113 -------SLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFH 165 ++DW PD GLPKPDL LFL L L + +KR +G ERYE FQ + +CF Sbjct: 119 KNKQQLNNIDWLLSPDKGLPKPDLTLFLTLDLEEISKRKGWGDERYELQQFQAKVKQCFL 178 Query: 166 QLM---KDTTLN----------------WKMVDASKSIEAVHEDIRVLS 195 +++ KD T+ W++++ +K+ E +++ I+ ++ Sbjct: 179 EILDTNKDPTIRIVDVGGKTIDQVTTQLWEIIETNKNHELINDSIQFIT 227 >4S35-A nrPDB Length = 195 Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 64/197 (32%), Positives = 108/197 (54%), Gaps = 17/197 (8%) Query: 8 LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDHS 67 LI EG+D +GK+TQ++KL E L G+ L R P T++G++L L + ++++ + Sbjct: 2 LIAFEGIDGSGKTTQAKKLYEYLKQKGYFVSLYREP-GGTKVGEVLREILLTE-ELDERT 59 Query: 68 VHLLFSANRWEQVPLIKEK----LSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDV- 122 LLF A+R + LI+EK L + +++DR+ S +A+ G + +++ K + Sbjct: 60 ELLLFEASRSK---LIEEKIIPDLKRDKVVILDRFVLSTIAYQGYGKGLDVEFIKNLNEF 116 Query: 123 ---GLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVD 179 G+ KPD+ L L + + D A R R+EN F E+ + F +L K+ N ++D Sbjct: 117 ATRGV-KPDITLLLDIPV-DIALRRLKEKNRFENKEFLEKVRKGFLELAKEEE-NVVVID 173 Query: 180 ASKSIEAVHEDI-RVLS 195 AS E V ++I R LS Sbjct: 174 ASGEEEEVFKEILRALS 190 >3HJN-A nrPDB Length = 197 Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 8/188 (4%) Query: 8 LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDHS 67 I EG+D +GKSTQ + L + L G + L R P TE G+ + L ++ +V + Sbjct: 2 FITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPG-GTETGEKIRKILLEE-EVTPKA 59 Query: 68 VHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD----VG 123 LF A+R V IK+ LS+G +++DRY S VA+ G N + ++ + G Sbjct: 60 ELFLFLASRNLLVTEIKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFATDG 119 Query: 124 LPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKS 183 L PDL ++ + + A KR R+E F ER + L ++ ++D +S Sbjct: 120 LI-PDLTFYIDVDVETALKRKG-ELNRFEKREFLERVREGYLVLAREHPERIVVLDGKRS 177 Query: 184 IEAVHEDI 191 IE +H D+ Sbjct: 178 IEEIHRDV 185 >3LV8-A nrPDB Length = 236 Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 22/206 (10%) Query: 3 ARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEI-GKLLSSYLQ--- 58 A IV+EG++ AGKST + +VE L G + R+ E G LL+ L+ Sbjct: 24 AMNAKFIVIEGLEGAGKSTAIQVVVETLQQNG-----IDHITRTREPGGTLLAEKLRALV 78 Query: 59 ----KKSDVEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAKENF- 112 +++D + LL A R + V +IK L++G +V DR+ S A+ G Sbjct: 79 KEEHPGEELQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIA 138 Query: 113 --SLDWCKQPDVGLPKPDLVLFL----QLQLADAAKRGAFGHERYENGAFQERALRCFHQ 166 ++ KQ +G KPDL L+L +L L A RG + +F ERA + + Sbjct: 139 PSTMQSLKQTALGDFKPDLTLYLDIDPKLGLERARGRGELDRIEKMDISFFERARERYLE 198 Query: 167 LMKDTTLNWKMVDASKSIEAVHEDIR 192 L ++ + M+DA++SIE V DIR Sbjct: 199 L-ANSDDSVVMIDAAQSIEQVTADIR 223 >5X7J-A nrPDB Length = 198 Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 70/144 (48%), Gaps = 12/144 (8%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERS-TEIGKLLSSYLQKKSDVE 64 G + LEG+D +GK+TQ+R+L L A G L R P E+ LL + ++ Sbjct: 3 GLFLTLEGLDGSGKTTQARRLAAFLEAQGRPVLLTREPGGGLPEVRSLLLT-----QELS 57 Query: 65 DHSVHLLFSANRWEQV-PLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDW----CKQ 119 + +LLFSA+R E V +I L+ G ++ DRY S +A+ G L W ++ Sbjct: 58 PEAEYLLFSADRAEHVRKVILPGLAAGKVVISDRYLDSSLAYQGYGRGLPLPWLREVARE 117 Query: 120 PDVGLPKPDLVLFLQLQLADAAKR 143 GL KP L L L A +R Sbjct: 118 ATRGL-KPRLTFLLDLPPEAALRR 140 >4TMK-A nrPDB Length = 213 Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 16/202 (7%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64 R IV+EG++ AGK+T +VE L G R + T++ + L S L V Sbjct: 2 RSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLLLDIKSVG 61 Query: 65 DHSVH-----LLFSANRWEQV-PLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFS---LD 115 D + L+F A R + V +IK L+ G ++ DR+ S A+ G L Sbjct: 62 DEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHMLA 121 Query: 116 WCKQPDVGLPKPDLVLFL----QLQLADAAKRGAFGHERYENGAFQERALRCFHQL-MKD 170 + +G +PDL L+L ++ L A RG E+ F R + +L +D Sbjct: 122 TLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRTRARYLELAAQD 181 Query: 171 TTLNWKMVDASKSIEAVHEDIR 192 +++ +DA++ +EAV + IR Sbjct: 182 KSIH--TIDATQPLEAVMDAIR 201 >3UWO-A nrPDB Length = 220 Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 17/196 (8%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD--- 62 G + LEG + AGKST L E L G +L R P T + + + L SD Sbjct: 11 GLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPG-GTPLAERIRELLLAPSDEPM 69 Query: 63 VEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENF------SLDW 116 D + L+F+A +I+ L++G ++ DR+ + A+ G +L+ Sbjct: 70 AADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALES 129 Query: 117 CKQPDVGLPKPDLVLFLQLQ----LADAAKRGAFGHERYENGAFQERALRCFHQLMKDTT 172 Q D+ +PDL L L LA AA RG E+ F E + + Q Sbjct: 130 FVQGDL---RPDLTLVFDLPVEIGLARAAARGRLDRFEQEDRRFFEAVRQTYLQRAAQAP 186 Query: 173 LNWKMVDASKSIEAVH 188 ++++DA + V Sbjct: 187 ERYQVLDAGLPLAEVQ 202 >5NRN-A nrPDB Length = 214 Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 16/152 (10%) Query: 8 LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYL--QKKSDVED 65 LI +EGVD AGK T KL A AAG L FP + +++ + D+ Sbjct: 2 LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLAS 61 Query: 66 --HSVHLLFSANRWEQVPLIKEKLSQGVTLVV-DRYAFSGVAFTGAK--ENF---SLDWC 117 +++ LF+ +R V I + L +G +V+ DRY S A++ A+ EN + W Sbjct: 62 SVYAMATLFALDRAGAVHTI-QGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 Query: 118 KQPD---VGLPKPD--LVLFLQLQLADAAKRG 144 ++ + +GLPKPD ++L + +LA RG Sbjct: 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRG 152 >3V9P-A nrPDB Length = 227 Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 24/204 (11%) Query: 5 RGALIVLEGVDRAGKSTQSR----KLVEALCAAGHRAELLRFPERSTEIGKLLSSY-LQK 59 RG I EG+D AGK+T + +L E L AG + R P T +G+ L L + Sbjct: 24 RGKFITFEGIDGAGKTTHLQWFCDRLQERLGPAGRHVVVTREPG-GTRLGETLREILLNQ 82 Query: 60 KSDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLD---- 115 D+E ++ L+F+ R +I+ L++G +V DR+ + A+ G D Sbjct: 83 PMDLETEAL-LMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDKLEA 141 Query: 116 ---WCKQPDVGLPKPDLVLFLQL--QLADAAKRGAFGHE---RYENGAFQERALRCFHQL 167 W + G +PDL + + Q+A +A+RGA E+ AF R + + Sbjct: 142 LERWVQ----GGFQPDLTVLFDVPPQIA-SARRGAVRMPDKFESESDAFFARTRAEYLRR 196 Query: 168 MKDTTLNWKMVDASKSIEAVHEDI 191 ++ + +VD+S+ I + + + Sbjct: 197 AQEAPHRFVIVDSSEPIAQIRKQL 220 >3LD9-A nrPDB Length = 223 Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 4/166 (2%) Query: 8 LIVLEGVDRAGKSTQSRKLVEALC-AAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDH 66 I EG+D +GK+TQS L E L G +L T + + + + L K ++ Sbjct: 23 FITFEGIDGSGKTTQSHLLAEYLSEIYGVNNVVLTREPGGTLLNESVRNLLFKAQGLDSL 82 Query: 67 SVHLLFSANRWEQ-VPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD--VG 123 S L F A R E V +IK L Q ++ DR+ S +A+ G + Q + V Sbjct: 83 SELLFFIAMRREHFVKIIKPSLMQKKIVICDRFIDSTIAYQGYGQGIDCSLIDQLNDLVI 142 Query: 124 LPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMK 169 PD+ + + + ++ R + + F R F+ + K Sbjct: 143 DVYPDITFIIDVDINESLSRSCKNGYEFADMEFYYRVRDGFYDIAK 188 >4RZX-A nrPDB Length = 213 Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust. Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 36/213 (16%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDV 63 ++G LI EG+D +GKS+Q+ L + + R L S I ++ K++ Sbjct: 2 KKGVLIAFEGIDGSGKSSQATLLKDWIEL--KRDVYLTEWNSSDWIHDII-----KEAKK 54 Query: 64 EDHSVHLLFS-------ANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDW 116 +D L FS ++R+E+ I L G ++ DRY ++ A + +DW Sbjct: 55 KDLLTPLTFSLIHATDFSDRYER--YILPMLKSGFIVISDRYIYTAYARDSVR-GVDIDW 111 Query: 117 CKQPDVGLPKPDLVLFLQLQLADA---------------AKRGAFGHERYENGAFQERAL 161 K+ KPD+ ++++ A A F E G + + L Sbjct: 112 VKKLYSFAIKPDITFYIRVSPDIALERIKKSKRKIKPQEAGADIFPGLSPEEGFLKYQGL 171 Query: 162 --RCFHQLMKDTTLNWKMVDASKSIEAVHEDIR 192 + +L+KD N+ ++D +K+ + + IR Sbjct: 172 ITEVYDKLVKDE--NFIVIDGTKTPKEIQIQIR 202 >1P9N-A nrPDB Length = 170 Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust. Identities = 13/34 (38%), Positives = 20/34 (58%) Query: 18 GKSTQSRKLVEALCAAGHRAELLRFPERSTEIGK 51 GK+T +KL+ ALCA G R L++ ++ K Sbjct: 14 GKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDK 47 >4NTZ-A nrPDB Length = 217 Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 13/83 (15%) Query: 9 IVLEGVDRAGKSTQSRKLVEALCAAG-HRAELLRFP-ERSTEIGKLLSSYLQKKSDVEDH 66 +++ G+ AGK TQ+ K+VE A ++ R TE+G L SY+ K V D Sbjct: 8 LLIMGLPGAGKGTQAAKIVEQFHVAHISTGDMFRAAMANQTEMGVLAKSYIDKGELVPDE 67 Query: 67 SVHLLFSANRWEQVPLIKEKLSQ 89 + ++KE+LSQ Sbjct: 68 VTN-----------GIVKERLSQ 79 >5KWG-C nrPDB Length = 631 Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 3/47 (6%) Query: 55 SYLQKKSDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFS 101 S+LQ D+++ ++L + N+ QVPL + ++ +G L D YA + Sbjct: 50 SFLQ---DIQEVQGYVLIAHNQVRQVPLQRLRIVRGTQLFEDNYALA 93 >4AEZ-A nrPDB Length = 401 Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Query: 27 VEALCAAGHRAELLR---FPERSTEIGKLLSSYLQKKSDVEDHSVHLLFSA 74 V +L + H E++ FP+ + I SS L K+ D+ H +L+SA Sbjct: 306 VTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSA 356 >1N8Y-C nrPDB Length = 608 Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust. Identities = 14/47 (29%), Positives = 30/47 (63%), Gaps = 3/47 (6%) Query: 55 SYLQKKSDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFS 101 S+LQ D+++ ++L + N+ ++VPL + ++ +G L D+YA + Sbjct: 50 SFLQ---DIQEVQGYMLIAHNQVKRVPLQRLRIVRGTQLFEDKYALA 93 >2C9Y-A nrPDB Length = 242 Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 6/83 (7%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRA--ELLR-FPERSTEIGKLLSSYLQKKS 61 +G VL G AGK TQ+ +L E C H A ++LR +E+GK L + + Sbjct: 15 KGIRAVLLGPPGAGKGTQAPRLAENFCVC-HLATGDMLRAMVASGSELGKKLKATMDAGK 73 Query: 62 DVEDHSVHLLFSANRWEQVPLIK 84 V D V L N + PL K Sbjct: 74 LVSDEMVVELIEKNL--ETPLCK 94 Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 9/77 (11%) Query: 57 LQKKSDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDW 116 L ++SD + ++ + A + PLI+ +G+ +D V F FS Sbjct: 173 LIRRSDDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKAT 232 Query: 117 CKQPDVGLPKPDLVLFL 133 CK DLV+F+ Sbjct: 233 CK---------DLVMFI 240 >3OKS-A nrPDB Length = 451 Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELL 40 RGA+I +E V +AG + L +ALCA H A ++ Sbjct: 379 RGAMIAMELV-KAGTTEPDADLTKALCAGAHAAGVI 413 >2AK2-A nrPDB Length = 233 Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRA--ELLR-FPERSTEIGKLLSSYLQKKS 61 +G VL G AGK TQ+ KL + C H A ++LR +E+GK L + + Sbjct: 15 KGVRAVLLGPPGAGKGTQAPKLAKNFCVC-HLATGDMLRAMVASGSELGKKLKATMDAGK 73 Query: 62 DVEDHSVHLLFSAN 75 V D V L N Sbjct: 74 LVSDEMVLELIEKN 87 >5WP9-A nrPDB Length = 710 Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust. Identities = 14/43 (32%), Positives = 24/43 (55%) Query: 31 CAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDHSVHLLFS 73 C+ ELLRFP+ I ++++ L+K+ V + VH L + Sbjct: 446 CSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVA 488 >3NXS-A nrPDB Length = 329 Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Query: 11 LEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDHSVH 69 + GV GKST L L AGHR +L ST G S L K+ + +VH Sbjct: 62 ITGVPGVGKSTTIEALGMHLIEAGHRVAVLAVDPSSTRTG---GSILGDKTRMARLAVH 117 >4BEJ-A nrPDB Length = 617 Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust. Identities = 14/43 (32%), Positives = 24/43 (55%) Query: 31 CAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDHSVHLLFS 73 C+ ELLRFP+ I ++++ L+K+ V + VH L + Sbjct: 453 CSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVA 495 >4JYC-A nrPDB Length = 337 Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 20/42 (47%) Query: 9 IVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIG 50 + + GV GKST L L AAGH+ +L ST G Sbjct: 58 VGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTG 99 >5J32-A nrPDB Length = 403 Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 54/127 (42%), Gaps = 21/127 (16%) Query: 78 EQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGLPKPDLVLFLQLQL 137 E V + K L Q +L + F + GA +LD VG+P P+ + + Sbjct: 54 EVVSIAKNVLQQAGSLEGVEFNFREMPIGGA----ALDL-----VGVPLPEETISAAKE- 103 Query: 138 ADAAKRGAFG---------HERYENGAFQER-ALRCFHQLMKDTTLNWKMVDASKSIEAV 187 +DA GA G H R E G Q R AL+ F L T L ++VDAS V Sbjct: 104 SDAVLLGAIGGYKWDNNEKHLRPEKGLLQIRAALKVFANLRPATVLP-QLVDASTLKREV 162 Query: 188 HEDIRVL 194 E + ++ Sbjct: 163 AEGVDLM 169 >5CB6-A nrPDB Length = 197 Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust. Identities = 15/37 (40%), Positives = 23/37 (62%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELL 40 +RG I L G+ AGK+T + L + L +G+R E+L Sbjct: 23 QRGVTIWLTGLSGAGKTTITHALEKKLRDSGYRLEVL 59 >1TEV-A nrPDB Length = 196 Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust. Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 26/188 (13%) Query: 17 AGKSTQSRKLVEALCAAGHRA-ELLRFPERS--TEIGKLLSSYLQKKSDVEDHSVHLLFS 73 AGK TQ ++VE A ELLR ++ ++ G+L+ Y+++ V V + S Sbjct: 14 AGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIV---PVEITIS 70 Query: 74 ANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGLPKPDLVLFL 133 L+K ++ Q + + F F ++N W K D G VLF Sbjct: 71 --------LLKREMDQTMAANAQKNKFLIDGFPRNQDNLQ-GWNKTMD-GKADVSFVLFF 120 Query: 134 ----QLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNW------KMVDASKS 183 ++ + +RG +N E+ ++ + Q K + K +DASKS Sbjct: 121 DCNNEICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKPIIDLYEEMGKVKKIDASKS 180 Query: 184 IEAVHEDI 191 ++ V +++ Sbjct: 181 VDEVFDEV 188 >2YVU-A nrPDB Length = 186 Score = 26.9 bits (58), Expect = 6.1, Method: Compositional matrix adjust. Identities = 12/36 (33%), Positives = 23/36 (63%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELL 40 +G ++ L G+ +GK+T + +L + L G+R E+L Sbjct: 12 KGIVVWLTGLPGSGKTTIATRLADLLQKEGYRVEVL 47 >4O0M-A nrPDB Length = 524 Score = 26.6 bits (57), Expect = 9.2, Method: Compositional matrix adjust. Identities = 14/50 (28%), Positives = 24/50 (48%) Query: 7 ALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSY 56 ++I+ G GK+ K +E C G RA L + E ++ + SS+ Sbjct: 282 SIILATGATGTGKTLLVSKFLETGCQQGERALLFAYEESRAQLSRNASSW 331 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1E2Q-A nrPDB 308 1e-84 2WWH-A nrPDB 248 1e-66 2W0S-A nrPDB 238 1e-63 2TMK-A nrPDB 214 2e-56 3LD9-A nrPDB 201 2e-52 3LV8-A nrPDB 196 6e-51 3V9P-A nrPDB 195 1e-50 5UIV-A nrPDB 194 2e-50 4TMK-A nrPDB 194 2e-50 3HJN-A nrPDB 192 1e-49 3UWO-A nrPDB 191 2e-49 4S35-A nrPDB 179 6e-46 5X7J-A nrPDB 179 8e-46 5NRN-A nrPDB 121 2e-28 Sequences not found previously or not previously below threshold: 4MQB-A nrPDB 148 1e-36 4RZX-A nrPDB 86 9e-18 5LNK-k nrPDB 45 3e-05 2PEY-A nrPDB 41 3e-04 1TEV-A nrPDB 41 3e-04 5XTD-w nrPDB 40 5e-04 2OFX-A nrPDB 40 7e-04 1X6V-B nrPDB 40 7e-04 3ADK-A nrPDB 40 8e-04 3UMF-A nrPDB 39 0.002 1XMS-A nrPDB 38 0.004 3CM0-A nrPDB 37 0.006 1Z83-A nrPDB 36 0.010 4YEG-A nrPDB 36 0.013 3MD0-A nrPDB 35 0.016 5JRJ-A nrPDB 35 0.018 5CB6-A nrPDB 35 0.019 3A4L-A nrPDB 35 0.023 4JYC-A nrPDB 35 0.025 1RZ3-A nrPDB 35 0.027 3UPU-A nrPDB 35 0.028 5L3R-A nrPDB 35 0.030 5X6K-A nrPDB 35 0.031 1UKY-A nrPDB 35 0.031 4G1U-C nrPDB 35 0.034 3NXS-A nrPDB 35 0.034 1LVG-A nrPDB 34 0.035 2YVU-A nrPDB 34 0.039 3SR0-A nrPDB 34 0.054 2OG2-A nrPDB 34 0.065 5L3R-B nrPDB 34 0.065 2YYZ-A nrPDB 34 0.070 3CR8-A nrPDB 34 0.073 2AX4-A nrPDB 33 0.078 3DM5-A nrPDB 33 0.082 6FRK-x nrPDB 33 0.084 1UBG-A nrPDB 33 0.089 3W34-A nrPDB 33 0.092 3JAJ-z nrPDB 33 0.097 5L3Q-A nrPDB 33 0.11 3TK1-A nrPDB 33 0.11 2V3C-C nrPDB 33 0.12 6CUM-A nrPDB 32 0.14 3C8U-A nrPDB 32 0.15 2GKS-A nrPDB 32 0.15 5X6J-A nrPDB 32 0.16 3E70-C nrPDB 32 0.16 1SGW-A nrPDB 32 0.16 3TR0-A nrPDB 32 0.17 2IXE-A nrPDB 32 0.17 2BWJ-A nrPDB 32 0.17 4NP6-A nrPDB 32 0.17 3HR8-A nrPDB 32 0.18 5YKB-A nrPDB 32 0.18 2AK2-A nrPDB 32 0.18 5YCF-B nrPDB 32 0.19 2C9Y-A nrPDB 32 0.20 4BZX-A nrPDB 32 0.20 4F4J-A nrPDB 32 0.22 4EO3-A nrPDB 32 0.22 1MO5-A nrPDB 31 0.29 1FP7-A nrPDB 31 0.30 1ZAK-A nrPDB 31 0.32 3FB4-A nrPDB 31 0.33 3TLX-A nrPDB 31 0.34 5U1D-A nrPDB 31 0.40 2AKY-A nrPDB 31 0.40 5L3S-A nrPDB 31 0.41 5X41-A nrPDB 31 0.43 5GPN-q nrPDB 31 0.44 4YER-A nrPDB 31 0.46 1QZX-A nrPDB 31 0.48 4WIA-A nrPDB 31 0.48 5DGX-A nrPDB 31 0.49 4K46-A nrPDB 30 0.51 2I3B-A nrPDB 30 0.51 1P9N-A nrPDB 30 0.52 6CS8-A nrPDB 30 0.56 1G5T-A nrPDB 30 0.59 6B18-A nrPDB 30 0.60 4RY2-A nrPDB 30 0.64 5G41-A nrPDB 30 0.67 5U1D-B nrPDB 30 0.69 4AKE-A nrPDB 30 0.72 4ZIR-B nrPDB 30 0.75 2FEM-A nrPDB 30 0.76 4CVN-A nrPDB 30 0.80 4C7O-A nrPDB 30 0.81 1ZU4-A nrPDB 30 0.82 2J28-9 nrPDB 30 0.83 4AK9-A nrPDB 30 0.85 5GAD-l nrPDB 30 0.85 5GAF-i nrPDB 30 0.86 4WZ6-A nrPDB 30 0.86 4MKG-A nrPDB 30 0.87 5GAD-i nrPDB 30 0.87 3UIE-A nrPDB 30 0.93 2PZF-A nrPDB 30 0.94 2R6F-A nrPDB 30 0.96 1JJ7-A nrPDB 30 0.97 4RVC-A nrPDB 30 1.0 6IC4-I nrPDB 30 1.0 1XP8-A nrPDB 30 1.0 3UX8-A nrPDB 30 1.1 1P4S-A nrPDB 29 1.2 5ZME-A nrPDB 29 1.2 1VMA-A nrPDB 29 1.2 3CZP-A nrPDB 29 1.3 5EE5-B nrPDB 29 1.3 5G3Y-A nrPDB 29 1.3 4E22-A nrPDB 29 1.4 1YE8-A nrPDB 29 1.4 4QBH-A nrPDB 29 1.4 3PV0-A nrPDB 29 1.5 5JSZ-B nrPDB 29 1.6 2UVQ-A nrPDB 29 1.6 1G6H-A nrPDB 29 1.6 2IT1-A nrPDB 29 1.7 2JI4-A nrPDB 29 1.7 3J15-B nrPDB 29 1.8 5XZ2-A nrPDB 29 1.9 5EG1-A nrPDB 29 2.0 5GM6-Y nrPDB 29 2.1 2IY3-A nrPDB 29 2.1 5LJ6-A nrPDB 29 2.1 4PZL-A nrPDB 29 2.2 3VX4-A nrPDB 29 2.2 1J8M-F nrPDB 29 2.3 6CY1-A nrPDB 29 2.3 2IHY-A nrPDB 29 2.3 1Z47-A nrPDB 29 2.3 2FFH-A nrPDB 28 2.5 2WWW-A nrPDB 28 2.5 5YV5-A nrPDB 28 2.7 1RJ9-B nrPDB 28 2.7 1JI0-A nrPDB 28 2.8 2J41-A nrPDB 28 3.1 2VP0-A nrPDB 28 3.2 5LL6-h nrPDB 28 3.2 4MM1-A nrPDB 28 3.3 3GFO-A nrPDB 28 3.4 5C78-A nrPDB 28 3.4 4WB7-A nrPDB 28 3.5 6AQE-A nrPDB 28 3.6 2PJZ-A nrPDB 28 3.6 4XIG-S nrPDB 28 3.7 1V43-A nrPDB 28 3.8 5L3Q-B nrPDB 28 4.0 6HA8-V nrPDB 28 4.0 3ZQJ-A nrPDB 28 4.0 6F1T-i nrPDB 28 4.1 4NTZ-A nrPDB 28 4.2 2YZ2-A nrPDB 28 4.2 6F1Y-j nrPDB 27 4.2 1MOZ-A nrPDB 27 4.3 2IW3-A nrPDB 27 4.5 4DJD-D nrPDB 27 4.9 4QBG-B nrPDB 27 5.0 1WCV-1 nrPDB 27 5.0 5I4E-A nrPDB 27 5.2 5DO7-A nrPDB 27 5.3 1NKS-A nrPDB 27 5.7 2PCL-A nrPDB 27 5.9 2BDT-A nrPDB 27 5.9 1L2T-A nrPDB 27 6.1 5L3S-B nrPDB 27 6.5 6C2V-A nrPDB 27 7.9 1VIA-A nrPDB 27 8.9 2IYT-A nrPDB 26 9.7 >1E2Q-A nrPDB Length = 215 Score = 308 bits (789), Expect = 1e-84, Method: Composition-based stats. Identities = 211/212 (99%), Positives = 211/212 (99%) Query: 1 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKK 60 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKK Sbjct: 4 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKK 63 Query: 61 SDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQP 120 SDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQP Sbjct: 64 SDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQP 123 Query: 121 DVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDA 180 DVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDA Sbjct: 124 DVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDA 183 Query: 181 SKSIEAVHEDIRVLSEDAIRTATEKPLGELWK 212 SKSIEAVHEDIRVLSEDAI TATEKPLGELWK Sbjct: 184 SKSIEAVHEDIRVLSEDAIATATEKPLGELWK 215 >2WWH-A nrPDB Length = 212 Score = 248 bits (633), Expect = 1e-66, Method: Composition-based stats. Identities = 77/188 (40%), Positives = 113/188 (60%), Gaps = 2/188 (1%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDV 63 ++G IV EG+DR+GKSTQS+ LVE L + L FP R T IG+++S YL+ ++ + Sbjct: 8 KKGKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHLYFPNRETGIGQIISKYLKMENSM 67 Query: 64 EDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVG 123 + ++HLLFSANRWE + IK L +G+ +V DRYA+SGVA++ N + WC PD G Sbjct: 68 SNETIHLLFSANRWEHMNEIKSLLLKGIWVVCDRYAYSGVAYSSGALNLNKTWCMNPDQG 127 Query: 124 LPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKS 183 L KPD+V +L + A R +G E YE Q++ + + W +DA++ Sbjct: 128 LIKPDVVFYLNVPPNYAQNRSDYGEEIYEKVETQKKIYETYKHFAHEDY--WINIDATRK 185 Query: 184 IEAVHEDI 191 IE +H DI Sbjct: 186 IEDIHNDI 193 >2W0S-A nrPDB Length = 204 Score = 238 bits (608), Expect = 1e-63, Method: Composition-based stats. Identities = 86/207 (41%), Positives = 133/207 (64%), Gaps = 6/207 (2%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64 RGALIV EG+D++GK+TQ ++E++ A + L FP+RST GK++ YL +K Sbjct: 3 RGALIVFEGLDKSGKTTQCMNIMESIPAN--TIKYLNFPQRSTVTGKMIDDYLTRKKTYN 60 Query: 65 DHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 124 DH V+LLF ANRWE I+E+L QG+TL+VDRYAFSGVA+ AK S+ K + GL Sbjct: 61 DHIVNLLFCANRWEFASFIQEQLEQGITLIVDRYAFSGVAYAAAK-GASMTLSKSYESGL 119 Query: 125 PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKSI 184 PKPDLV+FL+ + + G E YE+ FQ++ L+ + +++++ ++W+++ + Sbjct: 120 PKPDLVIFLESGSKEINRN--VGEEIYEDVTFQQKVLQEYKKMIEEGDIHWQIISSEFEE 177 Query: 185 EAVHEDIRVLSEDAIRTATEKPLGELW 211 + E I+ + +AI T T P+G+LW Sbjct: 178 DVKKELIKNIVIEAIHTVT-GPVGQLW 203 >2TMK-A nrPDB Length = 216 Score = 214 bits (545), Expect = 2e-56, Method: Composition-based stats. Identities = 93/206 (45%), Positives = 125/206 (60%), Gaps = 12/206 (5%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKS-DV 63 RG LI++EG+DR GK+TQ L + L +LL+FPERST IG L++ YL S + Sbjct: 4 RGKLILIEGLDRTGKTTQCNILYKKLQP---NCKLLKFPERSTRIGGLINEYLTDDSFQL 60 Query: 64 EDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAK--ENFSLDWCKQPD 121 D ++HLLFSANRWE V IK+ L +G +V+DRY +SGVA++ AK LDWC QPD Sbjct: 61 SDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPD 120 Query: 122 VGLPKPDLVLFLQLQLAD-AAKRGAFGHERYENGAFQERALRCFHQLM----KDTTLNWK 176 VGL KPDL LFL Q D A++ FG ERYE FQE+ + F +L+ + + Sbjct: 121 VGLLKPDLTLFLSTQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKGDESIT 180 Query: 177 MVD-ASKSIEAVHEDIRVLSEDAIRT 201 +VD +K I+ V I + E + T Sbjct: 181 IVDVTNKGIQEVEALIWQIVEPVLST 206 >3LD9-A nrPDB Length = 223 Score = 201 bits (510), Expect = 2e-52, Method: Composition-based stats. Identities = 45/199 (22%), Positives = 80/199 (40%), Gaps = 5/199 (2%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEALCA-AGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64 I EG+D +GK+TQS L E L G +L T + + + + L K ++ Sbjct: 21 SMFITFEGIDGSGKTTQSHLLAEYLSEIYGVNNVVLTREPGGTLLNESVRNLLFKAQGLD 80 Query: 65 DHSVHLLFSANRWEQ-VPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD-- 121 S L F A R E V +IK L Q ++ DR+ S +A+ G + Q + Sbjct: 81 SLSELLFFIAMRREHFVKIIKPSLMQKKIVICDRFIDSTIAYQGYGQGIDCSLIDQLNDL 140 Query: 122 VGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDAS 181 V PD+ + + + ++ R + + F R F+ + K ++ Sbjct: 141 VIDVYPDITFIIDVDINESLSRSCKNGYEFADMEFYYRVRDGFYDIAKKNPHRCHVITDK 200 Query: 182 KSIEAVHEDIRVLSEDAIR 200 + +DI + + I+ Sbjct: 201 SETYDI-DDINFVHLEVIK 218 >3LV8-A nrPDB Length = 236 Score = 196 bits (498), Expect = 6e-51, Method: Composition-based stats. Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 12/211 (5%) Query: 3 ARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKK-- 60 A IV+EG++ AGKST + +VE L G T + + L + ++++ Sbjct: 24 AMNAKFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHP 83 Query: 61 -SDVEDHSVHLLFSANRWEQV-PLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFS---LD 115 +++D + LL A R + V +IK L++G +V DR+ S A+ G + + Sbjct: 84 GEELQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQ 143 Query: 116 WCKQPDVGLPKPDLVLFLQ----LQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDT 171 KQ +G KPDL L+L L L A RG + +F ERA + +L ++ Sbjct: 144 SLKQTALGDFKPDLTLYLDIDPKLGLERARGRGELDRIEKMDISFFERARERYLELA-NS 202 Query: 172 TLNWKMVDASKSIEAVHEDIRVLSEDAIRTA 202 + M+DA++SIE V DIR +D + Sbjct: 203 DDSVVMIDAAQSIEQVTADIRRALQDWLSQV 233 >3V9P-A nrPDB Length = 227 Score = 195 bits (496), Expect = 1e-50, Method: Composition-based stats. Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 14/205 (6%) Query: 2 AARRGALIVLEGVDRAGKSTQ----SRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYL 57 + RG I EG+D AGK+T +L E L AG + R P T +G+ L L Sbjct: 21 SMARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPAGRHVVVTREP-GGTRLGETLREIL 79 Query: 58 Q-KKSDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDW 116 + D+E + L+F+ R +I+ L++G +V DR+ + A+ G D Sbjct: 80 LNQPMDLETEA-LLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 138 Query: 117 CKQPD---VGLPKPDLVLFLQLQLADAAKRGAF----GHERYENGAFQERALRCFHQLMK 169 + + G +PDL + + A+ R E+ AF R + + + Sbjct: 139 LEALERWVQGGFQPDLTVLFDVPPQIASARRGAVRMPDKFESESDAFFARTRAEYLRRAQ 198 Query: 170 DTTLNWKMVDASKSIEAVHEDIRVL 194 + + +VD+S+ I + + + + Sbjct: 199 EAPHRFVIVDSSEPIAQIRKQLEGV 223 >5UIV-A nrPDB Length = 227 Score = 194 bits (493), Expect = 2e-50, Method: Composition-based stats. Identities = 88/229 (38%), Positives = 136/229 (59%), Gaps = 39/229 (17%) Query: 2 AARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKS 61 + RG LI++EG+DR+GKSTQ+ L L + +L++FP+RST IGKL++ YL KS Sbjct: 3 TSARGQLILIEGLDRSGKSTQASILSTKLSPS----KLIKFPDRSTPIGKLINEYLTNKS 58 Query: 62 -DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENF-------- 112 + D + HLLFSANRWE I++ L+QG +++DRY +SG+A+T AK +F Sbjct: 59 FTLSDQAAHLLFSANRWELSQQIQDLLNQGYFIILDRYIYSGIAYTLAKNDFHDETISQG 118 Query: 113 -------SLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFH 165 ++DW PD GLPKPDL LFL L L + +KR +G ERYE FQ + +CF Sbjct: 119 KNKQQLNNIDWLLSPDKGLPKPDLTLFLTLDLEEISKRKGWGDERYELQQFQAKVKQCFL 178 Query: 166 QLM---KDTTLN----------------WKMVDASKSIEAVHEDIRVLS 195 +++ KD T+ W++++ +K+ E +++ I+ ++ Sbjct: 179 EILDTNKDPTIRIVDVGGKTIDQVTTQLWEIIETNKNHELINDSIQFIT 227 >4TMK-A nrPDB Length = 213 Score = 194 bits (493), Expect = 2e-50, Method: Composition-based stats. Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 14/202 (6%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDV 63 R IV+EG++ AGK+T +VE L G R + T++ + L S L V Sbjct: 1 MRSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLLLDIKSV 60 Query: 64 EDH-----SVHLLFSANRWEQV-PLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFS---L 114 D + L+F A R + V +IK L+ G ++ DR+ S A+ G L Sbjct: 61 GDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHML 120 Query: 115 DWCKQPDVGLPKPDLVLFLQ----LQLADAAKRGAFGHERYENGAFQERALRCFHQLMKD 170 + +G +PDL L+L + L A RG E+ F R + +L Sbjct: 121 ATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRTRARYLELAAQ 180 Query: 171 TTLNWKMVDASKSIEAVHEDIR 192 + +DA++ +EAV + IR Sbjct: 181 -DKSIHTIDATQPLEAVMDAIR 201 >3HJN-A nrPDB Length = 197 Score = 192 bits (487), Expect = 1e-49, Method: Composition-based stats. Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 8/188 (4%) Query: 8 LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDHS 67 I EG+D +GKSTQ + L + L G + L R P TE G+ + L ++ +V + Sbjct: 2 FITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREP-GGTETGEKIRKILLEE-EVTPKA 59 Query: 68 VHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD----VG 123 LF A+R V IK+ LS+G +++DRY S VA+ G N + ++ + G Sbjct: 60 ELFLFLASRNLLVTEIKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFATDG 119 Query: 124 LPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKS 183 L PDL ++ + + A KR R+E F ER + L ++ ++D +S Sbjct: 120 LI-PDLTFYIDVDVETALKRKG-ELNRFEKREFLERVREGYLVLAREHPERIVVLDGKRS 177 Query: 184 IEAVHEDI 191 IE +H D+ Sbjct: 178 IEEIHRDV 185 >3UWO-A nrPDB Length = 220 Score = 191 bits (485), Expect = 2e-49, Method: Composition-based stats. Identities = 50/198 (25%), Positives = 80/198 (40%), Gaps = 11/198 (5%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62 G + LEG + AGKST L E L G +L R P T + + + L SD Sbjct: 9 MTGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREP-GGTPLAERIRELLLAPSDE 67 Query: 63 --VEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFS---LDWC 117 D + L+F+A +I+ L++G ++ DR+ + A+ G + Sbjct: 68 PMAADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAAL 127 Query: 118 KQPDVGLPKPDLVLFLQLQ----LADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTL 173 + G +PDL L L LA AA RG E+ F E + + Q Sbjct: 128 ESFVQGDLRPDLTLVFDLPVEIGLARAAARGRLDRFEQEDRRFFEAVRQTYLQRAAQAPE 187 Query: 174 NWKMVDASKSIEAVHEDI 191 ++++DA + V + Sbjct: 188 RYQVLDAGLPLAEVQAGL 205 >4S35-A nrPDB Length = 195 Score = 179 bits (455), Expect = 6e-46, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 103/193 (53%), Gaps = 9/193 (4%) Query: 8 LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDHS 67 LI EG+D +GK+TQ++KL E L G+ L R P T++G++L L + ++++ + Sbjct: 2 LIAFEGIDGSGKTTQAKKLYEYLKQKGYFVSLYREP-GGTKVGEVLREILLTE-ELDERT 59 Query: 68 VHLLFSANRWEQVPL-IKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDV---G 123 LLF A+R + + I L + +++DR+ S +A+ G + +++ K + Sbjct: 60 ELLLFEASRSKLIEEKIIPDLKRDKVVILDRFVLSTIAYQGYGKGLDVEFIKNLNEFATR 119 Query: 124 LPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDASKS 183 KPD+ L L + + D A R R+EN F E+ + F +L K+ N ++DAS Sbjct: 120 GVKPDITLLLDIPV-DIALRRLKEKNRFENKEFLEKVRKGFLELAKE-EENVVVIDASGE 177 Query: 184 IEAVHEDI-RVLS 195 E V ++I R LS Sbjct: 178 EEEVFKEILRALS 190 >5X7J-A nrPDB Length = 198 Score = 179 bits (454), Expect = 8e-46, Method: Composition-based stats. Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 11/196 (5%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDV 63 G + LEG+D +GK+TQ+R+L L A G L R P + S L ++ Sbjct: 1 MPGLFLTLEGLDGSGKTTQARRLAAFLEAQGRPVLLTREPGGGLP---EVRSLLLT-QEL 56 Query: 64 EDHSVHLLFSANRWEQV-PLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWC----K 118 + +LLFSA+R E V +I L+ G ++ DRY S +A+ G L W + Sbjct: 57 SPEAEYLLFSADRAEHVRKVILPGLAAGKVVISDRYLDSSLAYQGYGRGLPLPWLREVAR 116 Query: 119 QPDVGLPKPDLVLFLQLQLADAAKR-GAFGHERYENGAFQERALRCFHQLMKDTTLNWKM 177 + GL KP L L L A +R F R + L + + + Sbjct: 117 EATRGL-KPRLTFLLDLPPEAALRRVRRPDRLEGLGLEFFRRVREGYLALARAEPGRFVV 175 Query: 178 VDASKSIEAVHEDIRV 193 +DA+ E + I+ Sbjct: 176 LDATLPEEEIARAIQA 191 >4MQB-A nrPDB Length = 208 Score = 148 bits (374), Expect = 1e-36, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 87/194 (44%), Gaps = 11/194 (5%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVED 65 A I EG + +GK+T ++ L + + R P G+ + + + +D++ Sbjct: 5 SAFITFEGPEGSGKTTVINEVYHRL-VKDYDVIMTREP-GGVPTGEEIRKIVLEGNDMDI 62 Query: 66 HSVHLLFSANRWEQ-VPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD--- 121 + +LF+A+R E V + L +G ++ DRY S +A+ G ++ + + Sbjct: 63 RTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFA 122 Query: 122 VGLPKPDLVLFLQLQLADAAKR-----GAFGHERYENGAFQERALRCFHQLMKDTTLNWK 176 + PDL ++L + +R E+ F E+ + + +++ + + +K Sbjct: 123 INGLYPDLTIYLNVSAEVGRERIIKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNESQRFK 182 Query: 177 MVDASKSIEAVHED 190 V+A + +E V ED Sbjct: 183 SVNADQPLENVVED 196 >5NRN-A nrPDB Length = 214 Score = 121 bits (303), Expect = 2e-28, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 24/196 (12%) Query: 8 LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQ--KKSDVED 65 LI +EGVD AGK T KL A AAG L FP + +++ + D+ Sbjct: 2 LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLAS 61 Query: 66 --HSVHLLFSANRWEQVPLIKEKLSQGV-TLVVDRYAFSGVAFTGAKE-----NFSLDWC 117 +++ LF+ +R V I+ L +G +++DRY S A++ A+ + W Sbjct: 62 SVYAMATLFALDRAGAVHTIQ-GLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWV 120 Query: 118 KQPD---VGLPKPD--LVLFLQLQLADAAKRG------AFGHERYE-NGAFQERALRCFH 165 ++ + +GLPKPD ++L + +LA RG + YE + Q+R + Sbjct: 121 QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYA 180 Query: 166 QLMKDT-TLNWKMVDA 180 +L W +V A Sbjct: 181 ELAAQGWGGRWLVVGA 196 >4RZX-A nrPDB Length = 213 Score = 86.3 bits (212), Expect = 9e-18, Method: Composition-based stats. Identities = 45/216 (20%), Positives = 89/216 (41%), Gaps = 28/216 (12%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDV 63 ++G LI EG+D +GKS+Q+ L + + R L S I ++ +KK + Sbjct: 2 KKGVLIAFEGIDGSGKSSQATLLKDWIELK--RDVYLTEWNSSDWIHDIIKE-AKKKDLL 58 Query: 64 EDHSVHLLFS---ANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQP 120 + L+ + ++R+E I L G ++ DRY ++ A +DW K+ Sbjct: 59 TPLTFSLIHATDFSDRYE--RYILPMLKSGFIVISDRYIYTAYARDSV-RGVDIDWVKKL 115 Query: 121 DVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGA-----------------FQERALRC 163 KPD+ ++++ A +R + + +Q Sbjct: 116 YSFAIKPDITFYIRVSPDIALERIKKSKRKIKPQEAGADIFPGLSPEEGFLKYQGLITEV 175 Query: 164 FHQLMKDTTLNWKMVDASKSIEAVHEDIRVLSEDAI 199 + +L+KD N+ ++D +K+ + + IR + I Sbjct: 176 YDKLVKD--ENFIVIDGTKTPKEIQIQIRKFVGELI 209 >5LNK-k nrPDB Length = 320 Score = 44.7 bits (104), Expect = 3e-05, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 85/224 (37%), Gaps = 31/224 (13%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGK----------LLS 54 LI ++G +GKS ++++ E L + + + +T GK L Sbjct: 21 NSKLITVDGNICSGKSKLAKEVAEKLGLKHFPEAGIHYADSTTGDGKPLPVRFSGNCSLE 80 Query: 55 SYLQKKSDVEDHSVHL---LFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAF--TGAK 109 + + +S L L+++ + ++ LS G +V++R +S F + Sbjct: 81 KFYDDPKSNDGNSYRLQAWLYASRLLQYADALEHLLSTGQGVVLERSIYSDFVFLEAMYR 140 Query: 110 ENFSLDWCKQPDVGLPK--------PDLVLFLQLQLADAAKRGAFGHERYE---NGAFQE 158 + F C + K P +V+++ + +++ R +E A+ + Sbjct: 141 QGFIRKQCVDHYNQVKKVTVCEYLPPHVVIYVDVPVSEVQSRIQKKGNPHEMKITSAYLQ 200 Query: 159 RALRCFH-QLMKDTTLNWKMVDAS----KSIEAVHEDIRVLSED 197 + + + + +++ S + E V EDI+ L D Sbjct: 201 DIENVYKGTFLPEMSEKCEVLQYSAWEAEDAEKVVEDIQYLKYD 244 >2PEY-A nrPDB Length = 179 Score = 41.2 bits (95), Expect = 3e-04, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 64/202 (31%), Gaps = 32/202 (15%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDV 63 RG + L G+ AGK+T S L E L G L G + L K Sbjct: 3 MRGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLD--------GDNIRQGLNKNLGF 54 Query: 64 EDHSVHLLFSANRWEQVPLIKE--KLSQGVTLVVDRYAFSGVA-FTGAKENFSLDWCKQP 120 +R E V I E KL LV S ++ +T + N +Q Sbjct: 55 SPE--------DREENVRRIAEVAKLFADAGLVC---ITSFISPYTQDRNNA-----RQI 98 Query: 121 DVGLPKPDLVLFLQLQLADAAKR---GAFGHERYENGAFQERALRCFHQLMKDTTLNWKM 177 G P +F+ L +R G + R + + + Sbjct: 99 HEGASLPFFEVFVDAPLHVCEQRDVKGLYKKARAGEIKGFTGIDSEYEK--PEAPELVLK 156 Query: 178 VDASKSIEAVHEDIRVLSEDAI 199 D+ + V + + +L E I Sbjct: 157 TDSCDVNDCVQQVVELLQERDI 178 >1TEV-A nrPDB Length = 196 Score = 41.2 bits (95), Expect = 3e-04, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 73/215 (33%), Gaps = 54/215 (25%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDV 63 + ++ + G AGK TQ ++VE A G+LL + Sbjct: 1 MKPLVVFVLGGPGAGKGTQCARIVEKYGYTHLSA------------GELLRDERKNPDS- 47 Query: 64 EDHSVHLLFSANRWEQVPLIKEKLSQGVTL-------VVDRYAFSGVAFTGAKENFSLDW 116 + LI++ + +G + ++ R +A K F +D Sbjct: 48 --------------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDG 93 Query: 117 CKQPDVGLP--------KPDLVLFL------QLQLADAAKRGAFGHERYENGAFQERALR 162 + L K D+ L ++ + +RG +N E+ ++ Sbjct: 94 FPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLEKRIQ 153 Query: 163 CFHQLMK------DTTLNWKMVDASKSIEAVHEDI 191 + Q K + K +DASKS++ V +++ Sbjct: 154 TYLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEV 188 >5XTD-w nrPDB Length = 320 Score = 40.5 bits (93), Expect = 5e-04, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 77/211 (36%), Gaps = 28/211 (13%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64 R +I ++G GK ++++ E L + +P+ +T GK L++ +E Sbjct: 21 RSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLATDYNGNCSLE 80 Query: 65 D-------------HSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAF--TGAK 109 L+S+ + ++ L+ G +V++R FS F Sbjct: 81 KFYDDPRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYN 140 Query: 110 ENFSLDWC-------KQPDVGL-PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERAL 161 + F C K + P LV+++ + + + +R + +E + Sbjct: 141 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEM-----KIT 195 Query: 162 RCFHQLMKDTTLNWKMVDASKSIEAVHEDIR 192 + Q +++ + + S+ E + R Sbjct: 196 SAYLQDIENAYKKTFLPEMSEKCEVLQYSAR 226 >2OFX-A nrPDB Length = 207 Score = 40.1 bits (92), Expect = 7e-04, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 64/201 (31%), Gaps = 32/201 (15%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64 RG + L G+ AGK+T S L E L G L G + L K Sbjct: 31 RGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLD--------GDNIRQGLNKNLGFS 82 Query: 65 DHSVHLLFSANRWEQVPLIKE--KLSQGVTLVVDRYAFSGVA-FTGAKENFSLDWCKQPD 121 +R E V I E KL LV S ++ +T + N +Q Sbjct: 83 PE--------DREENVRRIAEVAKLFADAGLVC---ITSFISPYTQDRNNA-----RQIH 126 Query: 122 VGLPKPDLVLFLQLQLADAAKR---GAFGHERYENGAFQERALRCFHQLMKDTTLNWKMV 178 G P +F+ L +R G + R + + + Sbjct: 127 EGASLPFFEVFVDAPLHVCEQRDVKGLYKKARAGEIKGFTGIDSEYEK--PEAPELVLKT 184 Query: 179 DASKSIEAVHEDIRVLSEDAI 199 D+ + V + + +L E I Sbjct: 185 DSCDVNDCVQQVVELLQERDI 205 >1X6V-B nrPDB Length = 630 Score = 40.1 bits (92), Expect = 7e-04, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 64/201 (31%), Gaps = 32/201 (15%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64 RG + L G+ AGK+T S L E L G L G + L K Sbjct: 51 RGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLD--------GDNIRQGLNKNLGFS 102 Query: 65 DHSVHLLFSANRWEQVPLIKE--KLSQGVTLVVDRYAFSGVA-FTGAKENFSLDWCKQPD 121 +R E V I E KL LV S ++ +T + N +Q Sbjct: 103 PE--------DREENVRRIAEVAKLFADAGLVC---ITSFISPYTQDRNNA-----RQIH 146 Query: 122 VGLPKPDLVLFLQLQLADAAKR---GAFGHERYENGAFQERALRCFHQLMKDTTLNWKMV 178 G P +F+ L +R G + R + + + Sbjct: 147 EGASLPFFEVFVDAPLHVCEQRDVKGLYKKARAGEIKGFTGIDSEYEK--PEAPELVLKT 204 Query: 179 DASKSIEAVHEDIRVLSEDAI 199 D+ + V + + +L E I Sbjct: 205 DSCDVNDCVQQVVELLQERDI 225 >3ADK-A nrPDB Length = 195 Score = 39.7 bits (91), Expect = 8e-04, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 69/200 (34%), Gaps = 31/200 (15%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHR--AELLRFPERSTEIGKLLSSYLQKKS 61 ++ +I + G +GK TQ K+V+ L + GK+LS ++K Sbjct: 7 KKSKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSARGKMLSEIMEKGQ 66 Query: 62 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 121 V +V + +V K L G R G ++ + Sbjct: 67 LVPLETVLDMLRDAMVAKVDTSKGFLIDGY----PREVKQG---------------EEFE 107 Query: 122 VGLPKPDLVLFLQLQLA----DAAKRGAFGHERYENGAFQERALRCFHQLMK------DT 171 + +P L+L++ KRG +N ++ L +++ + + Sbjct: 108 RKIGQPTLLLYVDAGPETMTKRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYEK 167 Query: 172 TLNWKMVDASKSIEAVHEDI 191 + V+A S++ V + Sbjct: 168 RGIVRKVNAEGSVDDVFSQV 187 >3UMF-A nrPDB Length = 217 Score = 38.5 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 66/196 (33%), Gaps = 23/196 (11%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHR--AELLRFPERSTEIGKLLSSYLQKKS 61 + +I + G +GK TQ KLV+ L + + GK L + +++ Sbjct: 27 AKAKVIFVLGGPGSGKGTQCEKLVQKFHFNHLSSGDLLRAEVQSGSPKGKELKAMMERGE 86 Query: 62 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 121 V V L + V L G R G+ F KE D Sbjct: 87 LVPLEVVLALLKEAMIKLVDKNCHFLIDGY----PRELDQGIKFE--KEVCPCLCVINFD 140 Query: 122 VGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNW------ 175 V ++ KR + +N + R F++L K ++ Sbjct: 141 VSE---------EVMRKRLLKRAETSNRVDDNEETIVKRFRTFNELTKPVIEHYKQQNKV 191 Query: 176 KMVDASKSIEAVHEDI 191 +DAS +++A+ + + Sbjct: 192 ITIDASGTVDAIFDKV 207 >1XMS-A nrPDB Length = 356 Score = 37.8 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 5/83 (6%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLR-----FPERSTEIGKLLSSYLQKK 60 G ++ + G + +GK+T + +++ A G + P + ++G + + L + Sbjct: 63 GRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQ 122 Query: 61 SDVEDHSVHLLFSANRWEQVPLI 83 D + ++ + + R V +I Sbjct: 123 PDTGEQALEICDALARSGAVDVI 145 >3CM0-A nrPDB Length = 186 Score = 37.0 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 5/80 (6%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEAL--CAAGHRAELLRFPERSTEIGKLLSSYLQKKSDV 63 G ++ G AGK TQ+ +L + L L R T +G+ + +++ V Sbjct: 4 GQAVIFLGPPGAGKGTQASRLAQELGFKKLSTGDILRDHVARGTPLGERVRPIMERGDLV 63 Query: 64 EDHSVHLLFSANRWEQVPLI 83 D + L R E + Sbjct: 64 PDDLILELI---REELAERV 80 >1Z83-A nrPDB Length = 196 Score = 36.2 bits (82), Expect = 0.010, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 69/200 (34%), Gaps = 31/200 (15%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHR--AELLRFPERSTEIGKLLSSYLQKKS 61 ++ +I + G +GK TQ K+V+ L + GK LS ++K Sbjct: 7 KKTNIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRSEVSSGSARGKKLSEIMEKGQ 66 Query: 62 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 121 V +V + +V K L G R G ++ + Sbjct: 67 LVPLETVLDMLRDAMVAKVNTSKGFLIDGY----PREVQQG---------------EEFE 107 Query: 122 VGLPKPDLVLFLQLQLA----DAAKRGAFGHERYENGAFQERALRCFHQLMK------DT 171 + +P L+L++ KRG +N ++ L +++ + + Sbjct: 108 RRIGQPTLLLYVDAGPETMTQRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYEK 167 Query: 172 TLNWKMVDASKSIEAVHEDI 191 + V+A S+++V + Sbjct: 168 RGIVRKVNAEGSVDSVFSQV 187 >4YEG-A nrPDB Length = 275 Score = 35.8 bits (81), Expect = 0.013, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 19/36 (52%) Query: 8 LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP 43 LI+ EG D AGK ++++E L G + L P Sbjct: 61 LIIFEGRDAAGKGGTIKRMMEHLNPRGAKVIALEKP 96 >3MD0-A nrPDB Length = 355 Score = 35.4 bits (80), Expect = 0.016, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%) Query: 11 LEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDHSVH 69 + GV GKST L L GHR +L ST G + L K+ + +VH Sbjct: 84 ITGVPGVGKSTAIEALGMHLIERGHRVAVLAVDPSSTRTGGSI---LGDKTRMARLAVH 139 >5JRJ-A nrPDB Length = 351 Score = 35.4 bits (80), Expect = 0.018, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 36/84 (42%), Gaps = 5/84 (5%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP-----ERSTEIGKLLSSYLQK 59 RG +I + G + +GK+T + + + + G + + ++G L+ L Sbjct: 65 RGRVIEIYGPESSGKTTLTLQSIAEMQKLGGTCAFIDAEHALDVTYAQKLGVNLNDLLIS 124 Query: 60 KSDVEDHSVHLLFSANRWEQVPLI 83 + D + ++ + + R V LI Sbjct: 125 QPDTGEQALEICDALVRSGAVDLI 148 >5CB6-A nrPDB Length = 197 Score = 35.4 bits (80), Expect = 0.019, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 8/63 (12%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDV 63 +RG I L G+ AGK+T + L + L +G+R E+L G ++ + L K Sbjct: 23 QRGVTIWLTGLSGAGKTTITHALEKKLRDSGYRLEVLD--------GDVVRTNLTKGLGF 74 Query: 64 EDH 66 Sbjct: 75 SKE 77 >3A4L-A nrPDB Length = 260 Score = 35.1 bits (79), Expect = 0.023, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 59/183 (32%), Gaps = 34/183 (18%) Query: 8 LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDHS 67 LI+L G+ GKST S+ L + L +L S I + + +K + S Sbjct: 6 LIILTGLPGVGKSTFSKNLAKILSKNNIDVIVL----GSDLIRESFPVWKEKYEEFIKKS 61 Query: 68 VHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKE---NFSLDWCKQPDVGL 124 + L I L ++VD + + + N + + K + Sbjct: 62 TYRL-----------IDSALKN-YWVIVDDTNY----YNSMRRDLINIAKKYNKNYAIIY 105 Query: 125 PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDT--TLNWKMVDASK 182 K L + + R ++ F + K + ++D +K Sbjct: 106 LKASLDVLI---------RRNIERGEKIPNEVIKKMYEKFDEPGKKYKWDEPFLIIDTTK 156 Query: 183 SIE 185 I+ Sbjct: 157 DID 159 >4JYC-A nrPDB Length = 337 Score = 35.1 bits (79), Expect = 0.025, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 22/49 (44%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLL 53 R + + GV GKST L L AAGH+ +L ST G + Sbjct: 54 RAIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTGGSI 102 >1RZ3-A nrPDB Length = 201 Score = 34.7 bits (78), Expect = 0.027, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Query: 6 GALIV-LEGVDRAGKSTQSRKLVEALCAAGHRAELL 40 G L++ ++G+ R+GK+T + +L + L G + Sbjct: 21 GRLVLGIDGLSRSGKTTLANQLSQTLREQGISVCVF 56 >3UPU-A nrPDB Length = 459 Score = 34.7 bits (78), Expect = 0.028, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 6/91 (6%) Query: 9 IVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDHSV 68 + + G G +T ++ ++EAL + G +L P T K + S L K HS+ Sbjct: 48 VTINGPAGTGATTLTKFIIEALISTGETGIILAAP---THAAKKILSKLSGKEASTIHSI 104 Query: 69 HLLFSANRWEQVPLIK---EKLSQGVTLVVD 96 + E V + L++ L+ D Sbjct: 105 LKINPVTYEENVLFEQKEVPDLAKCRVLICD 135 >5L3R-A nrPDB Length = 301 Score = 34.7 bits (78), Expect = 0.030, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 15/33 (45%) Query: 9 IVLEGVDRAGKSTQSRKLVEALCAAGHRAELLR 41 I+L G+ GK+T KL L G L+ Sbjct: 109 ILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIA 141 >5X6K-A nrPDB Length = 195 Score = 34.7 bits (78), Expect = 0.031, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 73/208 (35%), Gaps = 32/208 (15%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHR--AELLRFPERSTEIGKLLSSYLQKKS 61 + +I + G +GK TQ K+V L +E GK L + +QK Sbjct: 8 KDAKIIFVVGGPGSGKGTQCEKVVAKYGYTHLSSGDLLRAEVSSGSERGKQLQAIMQKGE 67 Query: 62 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 121 V +V +IK+ + + G G ++ + Sbjct: 68 LVPLDTVL-----------DMIKDAMIAKADV------SKGYLIDGYPREVKQG--EEFE 108 Query: 122 VGLPKPDLVLFLQLQ----LADAAKRGAFGHERYENGAFQERALRCFHQLMK------DT 171 + KP L+L++ + + KRG +N ++ L +++ + + Sbjct: 109 KKIGKPCLLLYVDAKGETMVKRLMKRGETSGRADDNEETIKKRLDLYYKATEPVIAFYEG 168 Query: 172 TLNWKMVDASKSIEAVHEDIRVLSEDAI 199 + VD+ ++ V + + + DA+ Sbjct: 169 RGIVRKVDSELPVDEVFKQVST-AIDAL 195 >1UKY-A nrPDB Length = 203 Score = 34.7 bits (78), Expect = 0.031, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 68/204 (33%), Gaps = 31/204 (15%) Query: 9 IVLEGVDRAGKSTQSRKLVE--ALCAAGHRAELLRFPER-STEIGKLLSSYLQKKSDVED 65 I + G AGK TQ KLV+ + L R ++ G+L+ + +++ V Sbjct: 18 IFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKNCIKEGQIVPQ 77 Query: 66 HSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGLP 125 L R +K + ++D G + D+ Sbjct: 78 EITLALL---RNAISDNVK---ANKHKFLID----------GFPRKMDQAISFERDIVES 121 Query: 126 KPDLVLFLQLQ----LADAAKRGAFGHERYENGAFQERALRCFHQLMK------DTTLNW 175 K +LF L +RG +N ++ F + +T Sbjct: 122 K--FILFFDCPEDIMLERLLERGKTSGRSDDNIESIKKRFNTFKETSMPVIEYFETKSKV 179 Query: 176 KMVDASKSIEAVHEDIRVLSEDAI 199 V +S+E V++D++ D++ Sbjct: 180 VRVRCDRSVEDVYKDVQDAIRDSL 203 >4G1U-C nrPDB Length = 266 Score = 34.7 bits (78), Expect = 0.034, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 17/37 (45%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELL 40 G ++ + G + AGKST R L L + LL Sbjct: 35 ASGEMVAIIGPNGAGKSTLLRLLTGYLSPSHGECHLL 71 >3NXS-A nrPDB Length = 329 Score = 34.7 bits (78), Expect = 0.034, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Query: 11 LEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDHSVH 69 + GV GKST L L AGHR +L ST G + L K+ + +VH Sbjct: 62 ITGVPGVGKSTTIEALGMHLIEAGHRVAVLAVDPSSTRTGGSI---LGDKTRMARLAVH 117 >1LVG-A nrPDB Length = 198 Score = 34.3 bits (77), Expect = 0.035, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 26/73 (35%), Gaps = 6/73 (8%) Query: 9 IVLEGVDRAGKSTQSRKL-VEALCAAGHRAELLRF-PERSTEIGKL----LSSYLQKKSD 62 +VL G AGKST +KL E G P E GK +Q+ Sbjct: 7 VVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIA 66 Query: 63 VEDHSVHLLFSAN 75 D H FS N Sbjct: 67 AGDFIEHAEFSGN 79 >2YVU-A nrPDB Length = 186 Score = 34.3 bits (77), Expect = 0.039, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 60/149 (40%), Gaps = 23/149 (15%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64 +G ++ L G+ +GK+T + +L + L G+R E+L T + + E Sbjct: 12 KGIVVWLTGLPGSGKTTIATRLADLLQKEGYRVEVLDGDWARTTVSE------GAGFTRE 65 Query: 65 DHSVHLLFSANRWEQVPLIKEKLSQ-GVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVG 123 + HL +++ I L++ GV ++ S V+ N ++ + Sbjct: 66 ERLRHL-------KRIAWIARLLARNGVIVIC-----SFVSPYKQARNMVRRIVEEEGI- 112 Query: 124 LPKPDLVLFLQLQLADAAKRGAFGHERYE 152 P L ++++ L + +R G + Sbjct: 113 ---PFLEIYVKASLEEVIRRDPKGLYKKA 138 >3SR0-A nrPDB Length = 206 Score = 33.9 bits (76), Expect = 0.054, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 73/216 (33%), Gaps = 51/216 (23%) Query: 8 LIVLEGVDRAGKSTQSRKLVEA--LCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVED 65 ++V G AGK TQ+++L + L ++ T +GK Y+++ V D Sbjct: 2 ILVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPD 61 Query: 66 HSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGLP 125 + L I+E + ++ D + K+ +LD + + Sbjct: 62 DLIIAL-----------IEEVFPKHGNVIFDGFP------RTVKQAEALD--EMLEKKGL 102 Query: 126 KPDLVLFLQLQLADAAKRGAFGHERYENGAFQE--------------------RALRCFH 165 K D VL ++ +R + E G ++ Sbjct: 103 KVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPPPGVKVIQREDDKPEVIKKRL 162 Query: 166 QLMKDTTLNWK----------MVDASKSIEAVHEDI 191 ++ ++ T ++DASK +E V+ + Sbjct: 163 EVYREQTAPLIEYYKKKGILRIIDASKPVEEVYRQV 198 >2OG2-A nrPDB Length = 359 Score = 33.5 bits (75), Expect = 0.065, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 39/101 (38%), Gaps = 16/101 (15%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDV 63 R+ A+I++ GV+ GK+T KL L G + + G + + ++ Sbjct: 155 RKPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAA--------GDTFRAAASDQLEI 206 Query: 64 EDH---SVHLLFSANRWEQVPLIKEKLSQGV-----TLVVD 96 ++ ++ + ++ + + +G ++ D Sbjct: 207 WAERTGCEIVVAEGDKAKAATVLSKAVKRGKEEGYDVVLCD 247 >5L3R-B nrPDB Length = 293 Score = 33.5 bits (75), Expect = 0.065, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 39/101 (38%), Gaps = 16/101 (15%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDV 63 R+ A+I++ GV+ GK+T KL L G + + G + + ++ Sbjct: 89 RKPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAA--------GDTFRAAASDQLEI 140 Query: 64 EDH---SVHLLFSANRWEQVPLIKEKLSQGV-----TLVVD 96 ++ ++ + ++ + + +G ++ D Sbjct: 141 WAERTGCEIVVAEGDKAKAATVLSKAVKRGKEEGYDVVLCD 181 >2YYZ-A nrPDB Length = 359 Score = 33.5 bits (75), Expect = 0.070, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 38/131 (29%), Gaps = 9/131 (6%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHR-----AELLRFPERSTEIGKLLSSYLQ 58 + G + L G GK+T L + P + E+G + +Y Sbjct: 27 KDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIYFDDVLVNDIPPKYREVGMVFQNYAL 86 Query: 59 KKSDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKEN----FSL 114 ++ A R + + K + L++D + + Sbjct: 87 YPHMTVFENIAFPLRARRISKDEVEKRVVEIARKLLIDNLLDRKPTQLSGGQQQRVALAR 146 Query: 115 DWCKQPDVGLP 125 KQP V L Sbjct: 147 ALVKQPKVLLF 157 >3CR8-A nrPDB Length = 552 Score = 33.5 bits (75), Expect = 0.073, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 18/37 (48%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELL 40 R+G + G+ AGKST +R L L G R L Sbjct: 367 RQGFTVFFTGLSGAGKSTLARALAARLMEMGGRCVTL 403 >2AX4-A nrPDB Length = 198 Score = 33.1 bits (74), Expect = 0.078, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 56/198 (28%), Gaps = 41/198 (20%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64 RG + L G+ AGK+T S L E L + L G + L + Sbjct: 21 RGCTVWLTGLSGAGKTTISFALEEYLVSHAIPCYSLD--------GDNVRHGLNRNLGFS 72 Query: 65 DHSVHLLFSANRWEQVPLIKE--KLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDV 122 +R E + I E KL LV S A + ++ Sbjct: 73 P--------GDREENIRRIAEVAKLFADAGLVCITSFISPFA-------KDRENARKIHE 117 Query: 123 GLPKPDLVLFLQLQLADAAKRGAFGHER----------------YENGAFQERALRCFHQ 166 P +F+ L R G + YE ER L+ Sbjct: 118 SAGLPFFEIFVDAPLNICESRDVKGLYKRARAGEIKGFTGIDSDYEKPETPERVLKTNLS 177 Query: 167 LMKDTTLNWKMVDASKSI 184 + D + ++I Sbjct: 178 TVSDCVHQVVELLQEQNI 195 >3DM5-A nrPDB Length = 443 Score = 33.1 bits (74), Expect = 0.082, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 4/48 (8%) Query: 13 GVDRAGKSTQSRKLVEALCAAGHRAEL----LRFPERSTEIGKLLSSY 56 G+ +GK+T KL G++ + P ++ +LL Y Sbjct: 107 GIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRY 154 >6FRK-x nrPDB Length = 504 Score = 33.1 bits (74), Expect = 0.084, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%) Query: 2 AARRGA--LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELL 40 +G +I+ G+ +GK+T KL G + L+ Sbjct: 95 TPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLI 135 >1UBG-A nrPDB Length = 349 Score = 33.1 bits (74), Expect = 0.089, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 5/84 (5%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAG-----HRAELLRFPERSTEIGKLLSSYLQK 59 RG +I + G + +GK+T + V AAG AE PE + ++G S L Sbjct: 60 RGRVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVS 119 Query: 60 KSDVEDHSVHLLFSANRWEQVPLI 83 + D + ++ + R + +I Sbjct: 120 QPDTGEQALEIADMLVRSGALDII 143 >3W34-A nrPDB Length = 211 Score = 33.1 bits (74), Expect = 0.092, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 76/201 (37%), Gaps = 33/201 (16%) Query: 1 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKL-LSSYLQ- 58 M+A + +I + G +GK+T ++ L L G R LL ++G L L L+ Sbjct: 1 MSAPKPFVIGIAGGTASGKTTLAQALARTL---GERVALLPMDHYYKDLGHLPLEERLRV 57 Query: 59 --KKSDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKEN----- 111 D D +++L E + L +G+ + + Y F A+T + Sbjct: 58 NYDHPDAFDLALYL-------EHA----QALLRGLPVEMPVYDFR--AYTRSPRRTPVRP 104 Query: 112 FSLDWCKQPDVGLPKP-----DLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQ 166 + + V PK DL +F+ AD + E G E + + + Sbjct: 105 APVVILEGILVLYPKELRDLMDLKVFVDAD-ADERFIRRLKRDVLERGRSLEGVVAQYLE 163 Query: 167 LMKDTTLNWKMVDASKSIEAV 187 +K ++ V+ +K V Sbjct: 164 QVK--PMHLHFVEPTKRYADV 182 >3JAJ-z nrPDB Length = 426 Score = 33.1 bits (74), Expect = 0.097, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%) Query: 2 AARRGA--LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELL 40 +G +I+ G+ +GK+T KL G + L+ Sbjct: 92 TPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLI 132 >5L3Q-A nrPDB Length = 442 Score = 32.8 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%) Query: 2 AARRGA--LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELL 40 +G +I+ G+ +GK+T KL G + L+ Sbjct: 101 TPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLI 141 >3TK1-A nrPDB Length = 330 Score = 32.8 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 3/67 (4%) Query: 3 ARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD 62 A R + + GV GKST L L GHR +L S G + L K+ Sbjct: 53 AGRAMHVGITGVPGVGKSTSIEALGMHLIEQGHRVAVLAVDPSSVRSGGSI---LGDKTR 109 Query: 63 VEDHSVH 69 + +VH Sbjct: 110 MARLAVH 116 >2V3C-C nrPDB Length = 432 Score = 32.8 bits (73), Expect = 0.12, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 26/59 (44%) Query: 1 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQK 59 + ++ +I+L G+ +GK+T + KL + G + L+ + L +K Sbjct: 94 LNPKKQNVILLVGIQGSGKTTTAAKLARYIQKRGLKPALIAADTYRPAAYEQLKQLAEK 152 >6CUM-A nrPDB Length = 315 Score = 32.4 bits (72), Expect = 0.14, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 1/72 (1%) Query: 9 IVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERST-EIGKLLSSYLQKKSDVEDHS 67 I + G AGKST +V A G R +L S G LL ++ + + D Sbjct: 71 IGVTGPPGAGKSTTVGAMVGAYRERGLRVAVLAVDPSSPYSGGALLGDRIRMAAHINDPD 130 Query: 68 VHLLFSANRWEQ 79 V + A R Sbjct: 131 VLIRSMAARGHL 142 >3C8U-A nrPDB Length = 208 Score = 32.4 bits (72), Expect = 0.15, Method: Composition-based stats. Identities = 15/34 (44%), Positives = 19/34 (55%) Query: 7 ALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELL 40 L+ L G +GKST S L AL A G AE++ Sbjct: 23 QLVALSGAPGSGKSTLSNPLAAALSAQGLPAEVV 56 >2GKS-A nrPDB Length = 546 Score = 32.4 bits (72), Expect = 0.15, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 8/63 (12%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDV 63 ++G + L G+ AGKST + L L A G + LL G ++ ++L + Sbjct: 370 KQGFCVWLTGLPCAGKSTIAEILATMLQARGRKVTLLD--------GDVVRTHLSRGLGF 421 Query: 64 EDH 66 Sbjct: 422 SKE 424 >5X6J-A nrPDB Length = 217 Score = 32.4 bits (72), Expect = 0.16, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Query: 9 IVLEGVDRAGKSTQSRKLVEA--LCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDH 66 IVL G+ AGK TQ+ ++VE + + TE+G S++ + + V D Sbjct: 3 IVLMGLPGAGKGTQADRIVEKYGIPHISTGDMFRAAIQEGTELGVKAKSFMDQGALVPDE 62 Query: 67 S 67 Sbjct: 63 V 63 >3E70-C nrPDB Length = 328 Score = 32.4 bits (72), Expect = 0.16, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 10/140 (7%) Query: 3 ARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD 62 A + +I+ G + +GK+T KL L G + T + + Sbjct: 126 AEKPYVIMFVGFNGSGKTTTIAKLANWLKNHGFSVVIAA---SDTFRAGAIEQLEEHAKR 182 Query: 63 VEDHSVHLLFSANRWEQV-PLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 121 + + + A+ I+ ++G+ +V+ + N +D K+ Sbjct: 183 IGVKVIKHSYGADPAAVAYDAIQHAKARGIDVVL----IDTAGRSETNRNL-MDEMKKIA 237 Query: 122 VGLPKPDLVLFLQLQLADAA 141 + KP+LV+F+ LA A Sbjct: 238 R-VTKPNLVIFVGDALAGNA 256 >1SGW-A nrPDB Length = 214 Score = 32.4 bits (72), Expect = 0.16, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 15/43 (34%) Query: 1 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP 43 M +G ++ G + GK+T + + L P Sbjct: 30 MTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNGVP 72 >3TR0-A nrPDB Length = 205 Score = 32.4 bits (72), Expect = 0.17, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 72/217 (33%), Gaps = 26/217 (11%) Query: 2 AARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKS 61 A + L ++ AGK++ R LV+AL P+R Sbjct: 3 AMNKANLFIISAPSGAGKTSLVRALVKALAEIKISISHTTRPKRP--------------- 47 Query: 62 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 121 D F + ++KE + +R+ + + + D + D Sbjct: 48 --GDQEGVDYFFIDETRFQAMVKEGAFLEHATIYERHYGTEKDWVLRQLKAGRDVLLEID 105 Query: 122 -------VGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLN 174 L P L +F+ +A + + + ++R ++ + Sbjct: 106 WQGARQIRELFPPALSIFILPPSIEALRERLIKRRQDDTAIIEQRLALAREEMAHYKEFD 165 Query: 175 WKMVDASKSIEAVHEDIRVLSEDAI-RTATEKPLGEL 210 + +V+ + +AV I ++S + + R EK L L Sbjct: 166 YLVVNDNFD-QAVQNLIHIISAERLQRDVQEKKLSRL 201 >2IXE-A nrPDB Length = 271 Score = 32.0 bits (71), Expect = 0.17, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 16/38 (42%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP 43 G + L G + +GKST + L G + L P Sbjct: 45 GKVTALVGPNGSGKSTVAALLQNLYQPTGGKVLLDGEP 82 >2BWJ-A nrPDB Length = 199 Score = 32.0 bits (71), Expect = 0.17, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 28/90 (31%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDV 63 R+ +I + G +GK TQ KLVE F ST G+LL L Sbjct: 10 RKCKIIFIIGGPGSGKGTQCEKLVEK----------YGFTHLST--GELLREEL------ 51 Query: 64 EDHSVHLLFSANRWEQVPLIKEKLSQGVTL 93 A+ E+ LI++ + +G + Sbjct: 52 ----------ASESERSKLIRDIMERGDLV 71 >4NP6-A nrPDB Length = 217 Score = 32.0 bits (71), Expect = 0.17, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 2/65 (3%) Query: 9 IVLEGVDRAGKSTQSRKLVEAL--CAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDH 66 I+L G AGK TQ++ ++E L + TE+GK + + V D Sbjct: 6 IILLGAPGAGKGTQAQFIMEKFGIPQISTGDMLRAAIKAGTELGKQAKAVIDAGQLVSDD 65 Query: 67 SVHLL 71 + L Sbjct: 66 IILGL 70 >3HR8-A nrPDB Length = 356 Score = 32.0 bits (71), Expect = 0.18, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 5/84 (5%) Query: 5 RGALIVLEGVDRAGKSTQS-RKLVEALCAAGHRAELLRF----PERSTEIGKLLSSYLQK 59 RG ++ + G + +GK+T + + EA G A + P + +G L S L Sbjct: 60 RGRIVEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHALDPVYAKNLGVDLKSLLIS 119 Query: 60 KSDVEDHSVHLLFSANRWEQVPLI 83 + D + ++ ++ R V LI Sbjct: 120 QPDHGEQALEIVDELVRSGVVDLI 143 >5YKB-A nrPDB Length = 571 Score = 32.0 bits (71), Expect = 0.18, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 58/189 (30%), Gaps = 29/189 (15%) Query: 15 DRAGKSTQSRKLVEALCAAGHRAELLR--FPERSTEIGKLLSSYLQKKSDVEDHSVHLLF 72 D G ++ L G L FP + G ++ Y D+ +F Sbjct: 30 DGKGDFPGLTSRLDYLKNLGVDCLWLLPWFPSPLRDDGYDVADYRGIHPDLGTLDDFKVF 89 Query: 73 SANRWEQVPLIKEKLSQGVTLVVDRYAFSGVA----FTGAKENFSLDWCKQPDVGLP--K 126 ++E ++G+ ++ D + F A+ +L G P Sbjct: 90 ----------LREAHARGLWVIGDLVTNHTSSDHPWFQAARRGPTLP------DGSPNEY 133 Query: 127 PDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQL--MKDTTLNWKMVDASKSI 184 D ++ A R F N E+A + + LN+ D K + Sbjct: 134 HDYYVWSDEGKEYADTRIIFTDTEVSNWTLDEQAGKYYWHRFFASQPDLNY---DNPKVV 190 Query: 185 EAVHEDIRV 193 E +H R Sbjct: 191 EELHGAARF 199 >2AK2-A nrPDB Length = 233 Score = 32.0 bits (71), Expect = 0.18, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 2/75 (2%) Query: 3 ARRGALIVLEGVDRAGKSTQSRKLVEALCA--AGHRAELLRFPERSTEIGKLLSSYLQKK 60 + +G VL G AGK TQ+ KL + C L +E+GK L + + Sbjct: 13 SPKGVRAVLLGPPGAGKGTQAPKLAKNFCVCHLATGDMLRAMVASGSELGKKLKATMDAG 72 Query: 61 SDVEDHSVHLLFSAN 75 V D V L N Sbjct: 73 KLVSDEMVLELIEKN 87 >5YCF-B nrPDB Length = 193 Score = 32.0 bits (71), Expect = 0.19, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 69/200 (34%), Gaps = 31/200 (15%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHR--AELLRFPERSTEIGKLLSSYLQKKS 61 + +I + G +GK TQ K+V L +E GK L + +QK Sbjct: 6 KDAKIIFVVGGPGSGKGTQCEKIVAKYGYTHLSSGDLLRAEVASGSERGKQLQAIMQKGE 65 Query: 62 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 121 V +V +IK+ + + G G ++ + Sbjct: 66 LVPLDTVL-----------DMIKDAMIAKADV------SKGFLIDGYPREVKQG--EEFE 106 Query: 122 VGLPKPDLVLFLQLQ----LADAAKRGAFGHERYENGAFQERALRCFHQLMK------DT 171 + KP L+L++ + + KRG +N ++ L +++ + + Sbjct: 107 KKIGKPCLLLYVDAKAETMVKRLLKRGETSGRSDDNEETIKKRLDLYYKATEPVIAFYEG 166 Query: 172 TLNWKMVDASKSIEAVHEDI 191 K VD+ +++ V + Sbjct: 167 RGIVKKVDSELAVDDVFAQV 186 >2C9Y-A nrPDB Length = 242 Score = 32.0 bits (71), Expect = 0.20, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 2/73 (2%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCA--AGHRAELLRFPERSTEIGKLLSSYLQKKSD 62 +G VL G AGK TQ+ +L E C L +E+GK L + + Sbjct: 15 KGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKL 74 Query: 63 VEDHSVHLLFSAN 75 V D V L N Sbjct: 75 VSDEMVVELIEKN 87 >4BZX-A nrPDB Length = 173 Score = 32.0 bits (71), Expect = 0.20, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 10/68 (14%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKS--D 62 RG + G+ +GKS+ + + L G A +L G L L Sbjct: 3 RGKTVWFTGLSGSGKSSVAMLVERKLLEKGISAYVLD--------GDNLRHGLNADLGFS 54 Query: 63 VEDHSVHL 70 + D + +L Sbjct: 55 MADRAENL 62 >4F4J-A nrPDB Length = 202 Score = 32.0 bits (71), Expect = 0.22, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 34/95 (35%), Gaps = 7/95 (7%) Query: 9 IVLEGVDRAGKSTQSRKL-VEALCAAGHRA-ELLRFPERSTEIGKLLS----SYLQKKSD 62 IV+ G GKST +KL E + G R P GK + + Sbjct: 20 IVISGPSGTGKSTLLKKLFAEYPDSFGFSVPSTTRTPRAGEVNGKDYNFVSVDEFKSMIK 79 Query: 63 VEDHSVHLLFSANRWE-QVPLIKEKLSQGVTLVVD 96 + FS N + V +K+ G T ++D Sbjct: 80 NNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILD 114 >4EO3-A nrPDB Length = 322 Score = 32.0 bits (71), Expect = 0.22, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 70/190 (36%), Gaps = 13/190 (6%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVED 65 G +L +AG S +R+ VE +A+++ I + L++ + D Sbjct: 24 GKYTILFFFPKAGTSGSTREAVEFSRENFEKAQVV-------GISRDSVEALKRFKEKND 76 Query: 66 HSVHLLFSANRWEQVPLIKEKLSQGVTL----VVDRYAFSGVAFTGAKENFSLDWCKQPD 121 V LL ++ + L G T+ ++DR+ F + K + K+ Sbjct: 77 LKVTLL--SDPEGILHEFFNVLENGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEAL 134 Query: 122 VGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDAS 181 L + DL L ++ A + E +A M + + +VD Sbjct: 135 DRLIEEDLSLNKHIEWRRARRALKKDRVPREELELLIKAAHLAPSCMNNQPWRFVVVDEE 194 Query: 182 KSIEAVHEDI 191 + ++ +HE + Sbjct: 195 ELLKKIHEAL 204 >1MO5-A nrPDB Length = 350 Score = 31.2 bits (69), Expect = 0.29, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAG-----HRAELLRFPERSTEIGKLLSSYLQK 59 RG +I + G + +GK+T + V AAG AE P+ + ++G S L Sbjct: 59 RGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVS 118 Query: 60 KSDVEDHSV 68 + D + ++ Sbjct: 119 QPDTGEQAL 127 >1FP7-A nrPDB Length = 557 Score = 31.2 bits (69), Expect = 0.30, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 13/104 (12%) Query: 6 GALIVLEGVD----RAGKSTQSRKLVEALCAAGHRAEL-LRFPERSTEIGKLLSSYLQKK 60 G LI++ + GK+T S L +AL G R + LR P G + Sbjct: 57 GKLILVTAITPTPAGEGKTTTSVGLTDALARLGKRVMVCLREPSLGPSFGIKGGAAGGGY 116 Query: 61 SDVED-HSVHLLFSAN-------RWEQVPLIKEKLSQGVTLVVD 96 + V ++L F+ + ++ L QG L +D Sbjct: 117 AQVVPMEDINLHFTGDIHAVTYAHNLLAAMVDNHLQQGNVLNID 160 >1ZAK-A nrPDB Length = 222 Score = 31.2 bits (69), Expect = 0.32, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 21/137 (15%) Query: 9 IVLEGVDRAGKSTQSRKLVEALCAAGHRA--ELLRFPERSTEIGKLLSSYLQKKSDVEDH 66 +++ G +GK TQ + A A L +E GK +++K V D Sbjct: 8 VMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDE 67 Query: 67 SVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGLPK 126 V + + + L+ D Y S + +L+ + + Sbjct: 68 IVVNMVKERLRQ------PDAQENGWLL-DGYPRS------YSQAMALETLE------IR 108 Query: 127 PDLVLFLQLQLADAAKR 143 PD + L + +R Sbjct: 109 PDTFILLDVPDELLVER 125 >3FB4-A nrPDB Length = 216 Score = 31.2 bits (69), Expect = 0.33, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 9 IVLEGVDRAGKSTQSRKLVEALCAAGHR--AELLRFPERSTEIGKLLSSYLQKKSDVEDH 66 IVL G+ AGK TQ+ +++E + TE+G S++ + + V D Sbjct: 3 IVLMGLPGAGKGTQAEQIIEKYEIPHISTGDMFRAAIKNGTELGLKAKSFMDQGNLVPDE 62 Query: 67 S 67 Sbjct: 63 V 63 >3TLX-A nrPDB Length = 243 Score = 31.2 bits (69), Expect = 0.34, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 59/188 (31%), Gaps = 23/188 (12%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEA--LCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDV 63 G I G +GK TQS L ++ C L E+ TE+G + + + + V Sbjct: 30 GRYI-FLGAPGSGKGTQSLNLKKSHCYCHLSTGDLLREAAEKKTELGLKIKNIINEGKLV 88 Query: 64 EDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENF--SLDWCKQPD 121 +D V L L + +G ++D G N + D K Sbjct: 89 DDQMVLSLVDE------KLKTPQCKKGF--ILD----------GYPRNVKQAEDLNKLLQ 130 Query: 122 VGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVDAS 181 K D V + + R + +G + +D N ++ Sbjct: 131 KNQTKLDGVFYFNVPDEVLVNRISGRLIHKPSGRIYHKIFNPPKVPFRDDVTNEPLIQRE 190 Query: 182 KSIEAVHE 189 E V + Sbjct: 191 DDNEDVLK 198 >5U1D-A nrPDB Length = 748 Score = 30.8 bits (68), Expect = 0.40, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 56/182 (30%), Gaps = 38/182 (20%) Query: 2 AARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP------------------ 43 R G + L G + +GKST + L G + L P Sbjct: 527 TLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQ 586 Query: 44 ---ERSTEIGKLLSSYLQKKSDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAF 100 + + ++ L +K +E+ + +A + I L QG VD Sbjct: 587 EPQVFGRSLQENIAYGLTQKPTMEEITA----AAVKSGAHSFI-SGLPQGYDTEVD---E 638 Query: 101 SGVAFTGAKEN---FSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQ 157 +G +G + + ++P V L D L A + YE+ Sbjct: 639 AGSQLSGGQRQAVALARALIRKPCV-LILDDATSALD-----ANSQLQVEQLLYESPERY 692 Query: 158 ER 159 R Sbjct: 693 SR 694 >2AKY-A nrPDB Length = 220 Score = 30.8 bits (68), Expect = 0.40, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 13/83 (15%) Query: 9 IVLEGVDRAGKSTQSRKLVEALCAA--GHRAELLRFPERSTEIGKLLSSYLQKKSDVEDH 66 +VL G AGK TQ+ L E AA L + T++G + + V D Sbjct: 7 MVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVSDD 66 Query: 67 SVHLLFSANRWEQVPLIKEKLSQ 89 + V +IK++L+ Sbjct: 67 IM-----------VNMIKDELTN 78 >5L3S-A nrPDB Length = 298 Score = 30.8 bits (68), Expect = 0.41, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 19/34 (55%) Query: 8 LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLR 41 +I+L GV +GK+T + KL G++ L+ Sbjct: 104 IIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVA 137 >5X41-A nrPDB Length = 280 Score = 30.8 bits (68), Expect = 0.43, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 5/50 (10%) Query: 1 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIG 50 +A +G + + G + AGKST L L R L T G Sbjct: 26 LAVPKGESLAILGPNGAGKSTLLLHLNGTLRPQSGRVLL-----GGTATG 70 >5GPN-q nrPDB Length = 357 Score = 30.8 bits (68), Expect = 0.44, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 15/129 (11%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQ------- 58 +I ++G +GK +R++ E L + + + +T GK L L Sbjct: 59 SKVITVDGNICSGKGRLAREIAEKLGLRHFPEAGIHYADSTTGDGKPLDVQLSGNCSLEK 118 Query: 59 -----KKSDVEDHSVHLLFSANR-WEQVPLIKEKLSQGVTLVVDRYAFSGVAF--TGAKE 110 K +D + + A+R + ++ LS G +V++R +S F ++ Sbjct: 119 FYDDPKSNDGNSYRLQSWLYASRLLQYADALEHLLSTGQGVVLERSIYSDFVFLEAMYRQ 178 Query: 111 NFSLDWCKQ 119 F C + Sbjct: 179 GFIRKQCVE 187 >4YER-A nrPDB Length = 328 Score = 30.8 bits (68), Expect = 0.46, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 14/31 (45%) Query: 2 AARRGALIVLEGVDRAGKSTQSRKLVEALCA 32 + ++G + G + AGK+T L L Sbjct: 27 SVKKGEIFAFLGPNGAGKTTTIHMLTTLLKP 57 >1QZX-A nrPDB Length = 440 Score = 30.8 bits (68), Expect = 0.48, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 19/34 (55%) Query: 8 LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLR 41 +I+L GV +GK+T + KL G++ L+ Sbjct: 106 IIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVA 139 >4WIA-A nrPDB Length = 233 Score = 30.8 bits (68), Expect = 0.48, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 17/35 (48%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELL 40 G+LI++EG + GKS ++L + + Sbjct: 27 GSLIIIEGEESTGKSVLCQRLAYGFLQNRYSVTYV 61 >5DGX-A nrPDB Length = 256 Score = 30.8 bits (68), Expect = 0.49, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 29/95 (30%), Gaps = 14/95 (14%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDV 63 + G + G +GK+T + + L + +L L+ + Sbjct: 42 KAGQTVAFVGKSGSGKTTLTSIISRFYTQHEGEILL-----DGVDTRELTLENLRSHLSI 96 Query: 64 EDHSVHLL---------FSANRWEQVPLIKEKLSQ 89 +VHL F +R + + L + Sbjct: 97 VSQNVHLFDDTVYNNIAFGLSREVSEEEVIDALKR 131 >4K46-A nrPDB Length = 214 Score = 30.4 bits (67), Expect = 0.51, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 2/66 (3%) Query: 9 IVLEGVDRAGKSTQSRKLVEAL--CAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDH 66 I+L G AGK TQ++ ++ L + TE+GK S + V D Sbjct: 3 IILLGAPGAGKGTQAQFIMAKFGIPQISTGDMLRAAIKAGTELGKQAKSVIDAGQLVSDD 62 Query: 67 SVHLLF 72 + L Sbjct: 63 IILGLV 68 >2I3B-A nrPDB Length = 189 Score = 30.4 bits (67), Expect = 0.51, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 21/64 (32%), Gaps = 5/64 (7%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPE---RSTEIGKLLSSYLQKK 60 R + G GK+T K E L ++G + E IG + + + Sbjct: 1 ARHVFLT--GPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTR 58 Query: 61 SDVE 64 + Sbjct: 59 GPLS 62 >1P9N-A nrPDB Length = 170 Score = 30.4 bits (67), Expect = 0.52, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 19/35 (54%) Query: 8 LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRF 42 L+ GK+T +KL+ ALCA G R L++ Sbjct: 4 LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKH 38 >6CS8-A nrPDB Length = 303 Score = 30.4 bits (67), Expect = 0.56, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 14/31 (45%) Query: 9 IVLEGVDRAGKSTQSRKLVEALCAAGHRAEL 39 I++ GV+ GK+T KL G L Sbjct: 102 ILMVGVNGVGKTTTIGKLARQFEQQGKSVML 132 >1G5T-A nrPDB Length = 196 Score = 30.4 bits (67), Expect = 0.59, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 4/68 (5%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64 RG +IV G + GK+T + G +++F + + G+ L + VE Sbjct: 28 RGIIIVFTG-NGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGER---NLLEPHGVE 83 Query: 65 DHSVHLLF 72 + F Sbjct: 84 FQVMATGF 91 >6B18-A nrPDB Length = 308 Score = 30.4 bits (67), Expect = 0.60, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 20/44 (45%) Query: 2 AARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPER 45 + + LIV + +D AGK + ++ L G + + P + Sbjct: 67 SGTKSVLIVFQAMDAAGKDGTVKHIMTGLNPQGVKVTSFKVPSK 110 >4RY2-A nrPDB Length = 730 Score = 30.4 bits (67), Expect = 0.64, Method: Composition-based stats. Identities = 6/32 (18%), Positives = 15/32 (46%) Query: 1 MAARRGALIVLEGVDRAGKSTQSRKLVEALCA 32 + +G + + G +GK+T ++ L+ Sbjct: 510 LTIPKGKTVAIVGESGSGKTTLAKLLMNFYSP 541 >5G41-A nrPDB Length = 223 Score = 30.1 bits (66), Expect = 0.67, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 9 IVLEGVDRAGKSTQSRKLVEA--LCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDH 66 +VL G+ AGK TQ+ K+VE + + TE+G S++ K V D Sbjct: 3 LVLMGLPGAGKGTQAEKIVEKYGIPHISTGDMFRAAIKEGTELGLKAKSFMDKGELVPDE 62 Query: 67 S 67 Sbjct: 63 V 63 >5U1D-B nrPDB Length = 686 Score = 30.1 bits (66), Expect = 0.69, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 17/42 (40%) Query: 2 AARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP 43 R G + L G + +GKST + L G + L P Sbjct: 492 TLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQVLLDEKP 533 >4AKE-A nrPDB Length = 214 Score = 30.1 bits (66), Expect = 0.72, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 2/66 (3%) Query: 9 IVLEGVDRAGKSTQSRKLVEA--LCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDH 66 I+L G AGK TQ++ ++E + L + +E+GK + V D Sbjct: 3 IILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDE 62 Query: 67 SVHLLF 72 V L Sbjct: 63 LVIALV 68 >4ZIR-B nrPDB Length = 268 Score = 30.1 bits (66), Expect = 0.75, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 17/29 (58%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEALCAAG 34 G + V+ G + +GK+T + L L AAG Sbjct: 37 GKIYVVVGKNGSGKTTLLKILAGLLAAAG 65 >2FEM-A nrPDB Length = 227 Score = 30.1 bits (66), Expect = 0.76, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 13/23 (56%) Query: 9 IVLEGVDRAGKSTQSRKLVEALC 31 I ++G AGK T + + EAL Sbjct: 8 ITIDGPSGAGKGTLCKAMAEALQ 30 >4CVN-A nrPDB Length = 191 Score = 30.1 bits (66), Expect = 0.80, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 14/25 (56%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEAL 30 G LI + G GK+T ++ L E L Sbjct: 11 GMLIAITGTPGVGKTTIAKLLAEKL 35 >4C7O-A nrPDB Length = 298 Score = 30.1 bits (66), Expect = 0.81, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 23/40 (57%) Query: 1 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELL 40 +AA+ A++++ G+ AGK+T KL + L + L+ Sbjct: 95 LAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLV 134 >1ZU4-A nrPDB Length = 320 Score = 30.1 bits (66), Expect = 0.82, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 23/55 (41%), Gaps = 4/55 (7%) Query: 13 GVDRAGKSTQSRKLVEALCAAGHRAEL----LRFPERSTEIGKLLSSYLQKKSDV 63 GV+ GK+T K+ G++ + + ++ + + + L K D+ Sbjct: 112 GVNGTGKTTSLAKMANYYAELGYKVLIAAADTFRAGATQQLEEWIKTRLNNKVDL 166 >2J28-9 nrPDB Length = 430 Score = 30.1 bits (66), Expect = 0.83, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 23/40 (57%) Query: 1 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELL 40 +AA+ A++++ G+ AGK+T KL + L + L+ Sbjct: 94 LAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLV 133 >4AK9-A nrPDB Length = 318 Score = 30.1 bits (66), Expect = 0.85, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 19/39 (48%) Query: 1 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAEL 39 + R A++++ GV+ GK+T KL G + + Sbjct: 111 LGNSRPAVLMIVGVNGGGKTTTLGKLANRFKKEGVKVLM 149 >5GAD-l nrPDB Length = 497 Score = 29.7 bits (65), Expect = 0.85, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 14/31 (45%) Query: 9 IVLEGVDRAGKSTQSRKLVEALCAAGHRAEL 39 I++ GV+ GK+T KL G L Sbjct: 296 ILMVGVNGVGKTTTIGKLARQFEQQGKSVML 326 >5GAF-i nrPDB Length = 398 Score = 29.7 bits (65), Expect = 0.86, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 23/40 (57%) Query: 1 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELL 40 +AA+ A++++ G+ AGK+T KL + L + L+ Sbjct: 95 LAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLV 134 >4WZ6-A nrPDB Length = 290 Score = 29.7 bits (65), Expect = 0.86, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 17/35 (48%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAEL 39 RG L+ + G AGK++ ++ L + + + Sbjct: 63 RGQLLAVAGSTGAGKTSLLMMIMGELEPSEGKIKH 97 >4MKG-A nrPDB Length = 217 Score = 29.7 bits (65), Expect = 0.87, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 9 IVLEGVDRAGKSTQSRKLVEA--LCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDH 66 IVL G+ AGK TQ+ ++VE + + T +G SY+ K V D Sbjct: 3 IVLMGLPGAGKGTQAERIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDE 62 Query: 67 S 67 Sbjct: 63 V 63 >5GAD-i nrPDB Length = 450 Score = 29.7 bits (65), Expect = 0.87, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 23/40 (57%) Query: 1 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELL 40 +AA+ A++++ G+ AGK+T KL + L + L+ Sbjct: 92 LAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLV 131 >3UIE-A nrPDB Length = 200 Score = 29.7 bits (65), Expect = 0.93, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 20/38 (52%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLR 41 ++G +I + G+ +GKST + L + L G +L Sbjct: 23 QKGCVIWVTGLSGSGKSTLACALNQMLYQKGKLCYILD 60 >2PZF-A nrPDB Length = 228 Score = 29.7 bits (65), Expect = 0.94, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 17/35 (48%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAEL 39 RG L+ + G AGK++ ++ L + + + Sbjct: 33 RGQLLAVAGSTGAGKTSLLMMIMGELEPSEGKIKH 67 >2R6F-A nrPDB Length = 972 Score = 29.7 bits (65), Expect = 0.96, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Query: 6 GALIVLEGVDRAGKSTQSR-KLVEALCAAGHRAE 38 G + + GV +GKST L +AL HRA+ Sbjct: 650 GTFVAVTGVSGSGKSTLVNEVLYKALAQKLHRAK 683 Score = 28.9 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 9/41 (21%) Query: 5 RGALIVLEGVDRAGKSTQS---------RKLVEALCAAGHR 36 RG L+VL G+ +GKS+ + R+ VE+L A + Sbjct: 43 RGKLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 83 >1JJ7-A nrPDB Length = 260 Score = 29.7 bits (65), Expect = 0.97, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 56/182 (30%), Gaps = 38/182 (20%) Query: 2 AARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP------------------ 43 R G + L G + +GKST + L G + L P Sbjct: 39 TLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQ 98 Query: 44 ---ERSTEIGKLLSSYLQKKSDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAF 100 + + ++ L +K +E+ + +A + I L QG VD Sbjct: 99 EPQVFGRSLQENIAYGLTQKPTMEEITA----AAVKSGAHSFI-SGLPQGYDTEVD---E 150 Query: 101 SGVAFTGAKEN---FSLDWCKQPDVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAFQ 157 +G +G + + ++P V L D L A + YE+ Sbjct: 151 AGSQLSGGQRQAVALARALIRKPCV-LILDDATSALD-----ANSQLQVEQLLYESPERY 204 Query: 158 ER 159 R Sbjct: 205 SR 206 >4RVC-A nrPDB Length = 245 Score = 29.7 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 17/29 (58%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAA 33 RG ++ L G++ AGKST + ++ + Sbjct: 28 RGEMVALIGLNGAGKSTTIKHIIGLMEPR 56 >6IC4-I nrPDB Length = 233 Score = 29.7 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 14/36 (38%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAEL 39 RRG + + G GK+T R + L L Sbjct: 25 RRGQITAIMGPSGTGKTTLLRLIGGQLVPDQGEVLL 60 >1XP8-A nrPDB Length = 366 Score = 29.7 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 5/81 (6%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLR-----FPERSTEIGKLLSSYLQK 59 RG + + G + GK+T + +V AG + P + +G L Sbjct: 73 RGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARALGVNTDELLVS 132 Query: 60 KSDVEDHSVHLLFSANRWEQV 80 + D + ++ ++ R + Sbjct: 133 QPDNGEQALEIMELLVRSGAI 153 >3UX8-A nrPDB Length = 670 Score = 29.7 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Query: 6 GALIVLEGVDRAGKSTQSR-KLVEALCAAGHRAE 38 G + + GV +GKST L +AL HRA+ Sbjct: 348 GTFVAVTGVSGSGKSTLVNEVLYKALAQKLHRAK 381 Score = 28.5 bits (62), Expect = 2.0, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 9/41 (21%) Query: 5 RGALIVLEGVDRAGKSTQS---------RKLVEALCAAGHR 36 RG L+VL G+ +GKS+ + R+ VE+L A + Sbjct: 43 RGKLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQ 83 >1P4S-A nrPDB Length = 181 Score = 29.3 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 6/66 (9%) Query: 9 IVLEGVDRAGKSTQSRKLVEALCAAGHRAELL--RFPERSTEIGKLLSSYL----QKKSD 62 ++L G AGK TQ+ KL E L L R E T++G YL SD Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSD 62 Query: 63 VEDHSV 68 + + V Sbjct: 63 LTNELV 68 >5ZME-A nrPDB Length = 687 Score = 29.3 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 5/59 (8%) Query: 2 AARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKK 60 A ++ I++ G GK++ S L L AAGH ++ ST+ LS L + Sbjct: 8 AGQQRKYIMISGKGGVGKTSLSASLAVKLAAAGHTTLVV-----STDPAHSLSDSLAQD 61 >1VMA-A nrPDB Length = 306 Score = 29.3 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 15/31 (48%) Query: 9 IVLEGVDRAGKSTQSRKLVEALCAAGHRAEL 39 I++ GV+ GK+T KL + G L Sbjct: 107 IMVVGVNGTGKTTSCGKLAKMFVDEGKSVVL 137 >3CZP-A nrPDB Length = 500 Score = 29.3 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 16/36 (44%) Query: 8 LIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP 43 +I++ G++ AGK + L E + + P Sbjct: 45 IILINGIEGAGKGETVKLLNEWMDPRLIEVQSFLRP 80 Score = 27.7 bits (60), Expect = 3.4, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 16/35 (45%) Query: 10 VLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPE 44 V EG D AGK R++ +AL + + P Sbjct: 304 VFEGNDAAGKGGAIRRVTDALDPRQYHIVPIAAPT 338 >5EE5-B nrPDB Length = 171 Score = 29.3 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 45/104 (43%), Gaps = 17/104 (16%) Query: 9 IVLEGVDRAGKST-----QSRKLVEALCAAGHRAELLRFPERSTEIGKL-----LSSYLQ 58 I++ G+D AGK+T Q ++V + G E + + ++ L + Y + Sbjct: 10 ILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGLTSIRPYWR 69 Query: 59 KKSDVEDHSVHLLFSANR-------WEQVPLIKEKLSQGVTLVV 95 D ++++ S +R E V +++E+ + LVV Sbjct: 70 CYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVV 113 >5G3Y-A nrPDB Length = 226 Score = 29.3 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%) Query: 9 IVLEGVDRAGKSTQSRKLVEA--LCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDH 66 ++L G AGK TQ+ K+VE + + TE+G Y+ K V D Sbjct: 3 LILLGPPGAGKGTQAEKIVEEYGIPHISTGDMFRAAIKEGTELGLKAKEYMDKGELVPDE 62 Query: 67 S 67 Sbjct: 63 V 63 >4E22-A nrPDB Length = 252 Score = 29.3 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 9 IVLEGVDRAGKSTQSRKLVEAL 30 I ++G AGK T + L E+L Sbjct: 30 ITVDGPSGAGKGTLCKALAESL 51 >1YE8-A nrPDB Length = 178 Score = 29.3 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Query: 9 IVLEGVDRAGKSTQSRKLVEAL--CAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDH 66 I++ G GK+T +K+VE L A G E +R PE G + + KK Sbjct: 3 IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSK 62 >4QBH-A nrPDB Length = 217 Score = 29.3 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 9 IVLEGVDRAGKSTQSRKLVEA--LCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDH 66 +VL G+ AGK TQ+ ++VEA + + T +G Y+ + V D Sbjct: 3 LVLMGLPGAGKGTQAERIVEAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVPDE 62 Query: 67 S 67 Sbjct: 63 V 63 >3PV0-A nrPDB Length = 381 Score = 28.9 bits (63), Expect = 1.5, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 66/200 (33%), Gaps = 40/200 (20%) Query: 6 GALIVLEGVDRAGKSTQSRKLV--EALCAAGHRAELLRF---PERSTEIGKLLSSYLQKK 60 G +V G GKST R + E + + R P +G + SY Sbjct: 29 GEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYP 88 Query: 61 --SDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTL-----VVDRYAFSGVAFTGAKEN-- 111 S E+ S L + + E +I ++++Q + ++DR A +G + Sbjct: 89 HLSVAENMSFGLKLAGAKKE---VINQRVNQVAEVLQLAHLLDR---KPKALSGGQRQRV 142 Query: 112 -FSLDWCKQPDVGLPKPDLVLFLQLQLA--DAAKRGAFGHERYENGAFQERALRCFHQLM 168 +P V L L+ DAA R R E +R R + Sbjct: 143 AIGRTLVAEPS--------VFLLDEPLSNLDAALRVQM---RIEISRLHKRLGRTMIYVT 191 Query: 169 KDT------TLNWKMVDASK 182 D ++DA + Sbjct: 192 HDQVEAMTLADKIVVLDAGR 211 >5JSZ-B nrPDB Length = 287 Score = 28.9 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 2/68 (2%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVED 65 G I L G +GKST + L + E+ + + E G L++K + Sbjct: 33 GKFIALVGHTGSGKSTLMQHFNALLKPTSGKIEIAGY-TITPETGNKGLKDLRRKVSLAF 91 Query: 66 H-SVHLLF 72 S LF Sbjct: 92 QFSEAQLF 99 >2UVQ-A nrPDB Length = 245 Score = 28.9 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 16/34 (47%) Query: 3 ARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHR 36 + R LI + G +GKST K++E L Sbjct: 22 SMRPFLIGVSGGTASGKSTVCEKIMELLGQNEVE 55 >1G6H-A nrPDB Length = 257 Score = 28.9 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 18/37 (48%) Query: 1 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRA 37 ++ +G + ++ G + +GKST + L A R Sbjct: 28 ISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRV 64 >2IT1-A nrPDB Length = 362 Score = 28.9 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 55/152 (36%), Gaps = 12/152 (7%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRA-----ELLRFPERSTEIGKLLSSYLQ 58 + G + L G +GKST + + ++ P + +G + ++ Sbjct: 27 KDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFDEKDVTELPPKDRNVGLVFQNWAL 86 Query: 59 KKSDVEDHSVHL---LFSANRWEQVPLIKE-KLSQGVTLVVDRYAFSGVAFTGAKENFSL 114 ++ L A R E ++E + +++RY + + + Sbjct: 87 YPHMTVYKNIAFPLELRKAPREEIDKKVREVAKMLHIDKLLNRYPWQLSGGQQQRVAIAR 146 Query: 115 DWCKQPDVGL---PKPDLVLFLQLQLADAAKR 143 K+P+V L P +L L+L++ KR Sbjct: 147 ALVKEPEVLLLDEPLSNLDALLRLEVRAELKR 178 >2JI4-A nrPDB Length = 379 Score = 28.9 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 7/78 (8%) Query: 1 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEI-------GKLL 53 M +G L++ + S+K+ E L + ++ + P R T + GK + Sbjct: 23 MNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDV 82 Query: 54 SSYLQKKSDVEDHSVHLL 71 DV + LL Sbjct: 83 FIIQTVSKDVNTTIMELL 100 >3J15-B nrPDB Length = 593 Score = 28.9 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 7/30 (23%), Positives = 14/30 (46%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAA 33 + G ++ + G + GK+T + L L Sbjct: 101 KDGMVVGIVGPNGTGKTTAVKILAGQLIPN 130 >5XZ2-A nrPDB Length = 196 Score = 28.9 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 70/208 (33%), Gaps = 35/208 (16%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHR--AELLRFPERSTEIGKLLSSYLQKKS 61 + ++ + G +GK TQ K+V L +E GK L + +QK Sbjct: 8 KNAKIVFVVGGPGSGKGTQCEKIVAKYGYTHLSSGDLLRAEVASGSERGKQLQAIMQKGE 67 Query: 62 DVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPD 121 V +V +IK+ + + G G ++ + Sbjct: 68 LVPLDTVL-----------DMIKDAMIAKADV------SKGYLIDGYPREVKQG--EEFE 108 Query: 122 VGLPKPDLVLFLQLQ----LADAAKRGAFGHERYENGAFQERALRCFHQLMK------DT 171 + P L+L++ + + KRG +N ++ L +++ + + Sbjct: 109 KKIGAPALLLYIDAKGETMVKRLMKRGETSGRADDNEETIKKRLDLYYKATEPVIAFYEQ 168 Query: 172 TLNWKMVDASKSIEAVHEDIRVLSEDAI 199 + +++ ++ V + E AI Sbjct: 169 RGIVRKINSELPVDEVF----AIVEKAI 192 >5EG1-A nrPDB Length = 580 Score = 28.5 bits (62), Expect = 2.0, Method: Composition-based stats. Identities = 7/28 (25%), Positives = 11/28 (39%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEALCAA 33 G + L G +GKST + + Sbjct: 371 GKMYSLTGPSGSGKSTLVKIISGYYKNY 398 >5GM6-Y nrPDB Length = 876 Score = 28.5 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Query: 4 RRGALIVLEGVDRAGKSTQS-RKLVE-ALCAAGHRAELLRFPER--STEIGKLLSSYLQ 58 ++ ++++ G +GK+TQ + LVE G + P R +T + ++ + Sbjct: 237 KKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMN 295 >2IY3-A nrPDB Length = 432 Score = 28.5 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 13 GVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLS 54 G+ +GK+T + KL G R L+ + + L Sbjct: 105 GLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLR 146 >5LJ6-A nrPDB Length = 664 Score = 28.5 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 7/26 (26%), Positives = 13/26 (50%) Query: 1 MAARRGALIVLEGVDRAGKSTQSRKL 26 ++ RG + + G +GKST + Sbjct: 48 LSIERGDFVAIMGQSGSGKSTLMNII 73 >4PZL-A nrPDB Length = 242 Score = 28.5 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Query: 9 IVLEGVDRAGKSTQSRKLVEALCAAGHRA-ELLRF-PERSTEIGKLLSSYLQKKSDVEDH 66 I+L G AGK TQ++ + + A +++R + + +G+ L L V D Sbjct: 27 IILLGAPGAGKGTQAKIIEQKYNIAHISTGDMIRETIKSGSALGQELKKVLDAGELVSDE 86 >3VX4-A nrPDB Length = 273 Score = 28.5 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 18/33 (54%) Query: 1 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAA 33 ++ ++G+ + L G +GK+T ++ +V Sbjct: 56 LSIKKGSKVSLVGASGSGKTTLAKLIVNFYEPN 88 >1J8M-F nrPDB Length = 297 Score = 28.5 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 16/32 (50%) Query: 9 IVLEGVDRAGKSTQSRKLVEALCAAGHRAELL 40 I+L GV GK+T + KL G + L+ Sbjct: 101 IMLVGVQGTGKTTTAGKLAYFYKKKGFKVGLV 132 >6CY1-A nrPDB Length = 329 Score = 28.5 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 19/37 (51%) Query: 3 ARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAEL 39 ++ +I++ GV+ GK+T KL + G + L Sbjct: 120 TKKPYVIMVVGVNGVGKTTTIGKLAHQFKSEGLKVVL 156 >2IHY-A nrPDB Length = 279 Score = 28.5 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 2/57 (3%) Query: 3 ARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELL-RFPERSTEIGKLLSSYLQ 58 A+ I+ G++ AGK+T L A L + P + + + ++ Sbjct: 45 AKGDKWILY-GLNGAGKTTLLNILNAYEPATSGTVNLFGKMPGKVGYSAETVRQHIG 100 >1Z47-A nrPDB Length = 355 Score = 28.5 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 6/68 (8%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRA-----ELLRFPERSTEIGKLLSSY-L 57 R G ++ L G +GK+T R + + P + +G + +Y L Sbjct: 39 REGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQKRNVGLVFQNYAL 98 Query: 58 QKKSDVED 65 + V D Sbjct: 99 FQHMTVYD 106 >2FFH-A nrPDB Length = 425 Score = 28.1 bits (61), Expect = 2.5, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 13 GVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLS 54 G+ +GK+T + KL G R L+ + + L Sbjct: 105 GLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLR 146 >2WWW-A nrPDB Length = 349 Score = 28.1 bits (61), Expect = 2.5, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 21/54 (38%) Query: 11 LEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64 L G AGKST + L GH+ +L S G L + +++ Sbjct: 79 LSGPPGAGKSTFIEYFGKMLTERGHKLSVLAVDPSSCTSGGSLLGDKTRMTELS 132 >5YV5-A nrPDB Length = 536 Score = 28.1 bits (61), Expect = 2.7, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 14/30 (46%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAA 33 + G ++ + G + GKST + L L Sbjct: 43 KEGMVVGIVGPNGTGKSTAVKILAGQLIPN 72 >1RJ9-B nrPDB Length = 300 Score = 28.1 bits (61), Expect = 2.7, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 17/42 (40%) Query: 13 GVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLS 54 G+ +GK+T + KL G R L+ + + L Sbjct: 105 GLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLR 146 >1JI0-A nrPDB Length = 240 Score = 28.1 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 15/29 (51%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAA 33 RG ++ L G + AGK+T + + A Sbjct: 31 RGQIVTLIGANGAGKTTTLSAIAGLVRAQ 59 >2J41-A nrPDB Length = 207 Score = 28.1 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 1 MAARRGALIVLEGVDRAGKSTQSRKLVE 28 M +G LIVL G GK T +++ E Sbjct: 1 MDNEKGLLIVLSGPSGVGKGTVRKRIFE 28 >2VP0-A nrPDB Length = 250 Score = 28.1 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 71/198 (35%), Gaps = 25/198 (12%) Query: 9 IVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP------ERSTEIGKLL----SSYLQ 58 +++EG +GK+T + LL P + +L+ + Sbjct: 23 VLIEGNIGSGKTTYLN----HFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKDPKKWAM 78 Query: 59 KKSDVEDHSVHLLFSANRWEQVPLIKEKLSQGVTLVVDRYAFSGVAFTGAKENFSLDWCK 118 ++ +A +++ +++ + V+ +G G +W K Sbjct: 79 PFQSYVTLTMLQSHTAPTNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLE-EWYK 137 Query: 119 QPDVGL-PKPDLVLFLQLQLADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLN--- 174 + + + DL+++L+ A +R R E + L+ H+L +D ++ Sbjct: 138 FIEESIHVQADLIIYLRTSPEVAYERIR-QRARSEESCVPLKYLQELHELHEDWLIHQRR 196 Query: 175 -----WKMVDASKSIEAV 187 ++DA ++E + Sbjct: 197 PQSCKVLVLDADLNLENI 214 >5LL6-h nrPDB Length = 608 Score = 27.7 bits (60), Expect = 3.2, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 14/27 (51%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEALCA 32 ++V+ G + GK+T + L AL Sbjct: 378 SEILVMMGENGTGKTTLIKLLAGALKP 404 >4MM1-A nrPDB Length = 250 Score = 27.7 bits (60), Expect = 3.3, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 156 FQERALRCFHQLMKDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEK 205 F+ + FH ++++ ++ ++D E E+ ++ AIR T+ Sbjct: 2 FKMKVEDYFHDILRERKIHLTLID---PEEQTPEEAVEIARAAIRGGTDG 48 >3GFO-A nrPDB Length = 275 Score = 27.7 bits (60), Expect = 3.4, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 17/43 (39%) Query: 1 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP 43 M +RG + + G + GKST + L + R P Sbjct: 29 MNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRILFDNKP 71 >5C78-A nrPDB Length = 564 Score = 27.7 bits (60), Expect = 3.4, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 12/30 (40%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAA 33 ++G I G GKST ++ L Sbjct: 373 KKGEKIAFIGESGCGKSTLVDLIIGLLKPK 402 >4WB7-A nrPDB Length = 405 Score = 27.7 bits (60), Expect = 3.5, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 16/43 (37%) Query: 137 LADAAKRGAFGHERYENGAFQERALRCFHQLMKDTTLNWKMVD 179 L+D KR F E F +A F + + N +D Sbjct: 54 LSDPRKREIFDRYGEEVKEFLAKAKEDFLKKWESPAQNTAHLD 96 >6AQE-A nrPDB Length = 266 Score = 27.7 bits (60), Expect = 3.6, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 21/40 (52%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP 43 ++ L++L+ D AGK +K++ A AG + + P Sbjct: 55 KQSLLLILQARDAAGKDGAVKKVIGAFNPAGVQITSFKQP 94 >2PJZ-A nrPDB Length = 263 Score = 27.7 bits (60), Expect = 3.6, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 17/31 (54%) Query: 5 RGALIVLEGVDRAGKSTQSRKLVEALCAAGH 35 G +++ G + +GK+T R + L +G+ Sbjct: 29 NGEKVIILGPNGSGKTTLLRAISGLLPYSGN 59 >4XIG-S nrPDB Length = 363 Score = 27.7 bits (60), Expect = 3.7, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 9/59 (15%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64 G +VL G GKST R + +G + G++++ K DV Sbjct: 30 GEFVVLVGPSGCGKSTTLRMVAGLEEISGGTIRID---------GRVINDLAPKDRDVA 79 >1V43-A nrPDB Length = 372 Score = 27.7 bits (60), Expect = 3.8, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 5/62 (8%) Query: 1 MAARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRA-----ELLRFPERSTEIGKLLSS 55 + + G +VL G GK+T R + R ++ P + I + S Sbjct: 32 LTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKDRNISMVFQS 91 Query: 56 YL 57 Y Sbjct: 92 YA 93 >5L3Q-B nrPDB Length = 638 Score = 27.7 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 25/66 (37%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDV 63 +R ++ GV+ GKST K+ L G + + L ++ ++ S + Sbjct: 416 QRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTFRAGAVEQLRTHTRRLSAL 475 Query: 64 EDHSVH 69 H Sbjct: 476 HPPEKH 481 >6HA8-V nrPDB Length = 548 Score = 27.7 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 12/88 (13%) Query: 2 AARRGALIVLEGVDRAGKSTQSRKLVEALCAAG------------HRAELLRFPERSTEI 49 + G + + G + +GK+T ++ A G E+ P T Sbjct: 319 TIQHGEKVAIIGPNGSGKTTLLNIILGQETAEGSVWVSPSANIGYLTQEVFDLPLEQTPE 378 Query: 50 GKLLSSYLQKKSDVEDHSVHLLFSANRW 77 + + + V++ HL F+A +W Sbjct: 379 ELFENETFKARGHVQNLMRHLGFTAAQW 406 >3ZQJ-A nrPDB Length = 993 Score = 27.7 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 9/41 (21%) Query: 5 RGALIVLEGVDRAGKSTQS---------RKLVEALCAAGHR 36 R ALIV G+ +GKS+ + R+ VE+L A + Sbjct: 45 RDALIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSAYARQ 85 >6F1T-i nrPDB Length = 492 Score = 27.7 bits (60), Expect = 4.1, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 14/24 (58%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEA 29 G I++ G D +GK+T KL A Sbjct: 54 GKNILVFGEDGSGKTTLMTKLQGA 77 >4NTZ-A nrPDB Length = 217 Score = 27.7 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 2/67 (2%) Query: 3 ARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHR--AELLRFPERSTEIGKLLSSYLQKK 60 A +++ G+ AGK TQ+ K+VE A TE+G L SY+ K Sbjct: 2 AMGSMNLLIMGLPGAGKGTQAAKIVEQFHVAHISTGDMFRAAMANQTEMGVLAKSYIDKG 61 Query: 61 SDVEDHS 67 V D Sbjct: 62 ELVPDEV 68 >2YZ2-A nrPDB Length = 266 Score = 27.7 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 19/48 (39%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLL 53 G +++ G +GKST + + + ++ EI + + Sbjct: 33 GECLLVAGNTGSGKSTLLQIVAGLIEPTSGDVLYDGERKKGYEIRRNI 80 >6F1Y-j nrPDB Length = 337 Score = 27.4 bits (59), Expect = 4.2, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 14/24 (58%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEA 29 G I++ G D +GK+T KL A Sbjct: 18 GKNILVFGEDGSGKTTLMTKLQGA 41 >1MOZ-A nrPDB Length = 183 Score = 27.4 bits (59), Expect = 4.3, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 5/39 (12%) Query: 9 IVLEGVDRAGKST-----QSRKLVEALCAAGHRAELLRF 42 I++ G+D AGK+T Q ++V G E L + Sbjct: 21 ILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSY 59 >2IW3-A nrPDB Length = 986 Score = 27.4 bits (59), Expect = 4.5, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 11/29 (37%) Query: 9 IVLEGVDRAGKSTQSRKLVEALCAAGHRA 37 I + G + AGKST L L Sbjct: 702 IAVIGPNGAGKSTLINVLTGELLPTSGEV 730 >4DJD-D nrPDB Length = 323 Score = 27.4 bits (59), Expect = 4.9, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 5/47 (10%) Query: 16 RAGKSTQSRKLVEA-----LCAAGHRAELLRFPERSTEIGKLLSSYL 57 GK T+ L EA L AG L+R PE + + + + Sbjct: 272 GWGKETERGILWEAVTATALLQAGAHILLMRHPEAVARVKENIDQLM 318 >4QBG-B nrPDB Length = 217 Score = 27.4 bits (59), Expect = 5.0, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%) Query: 9 IVLEGVDRAGKSTQSRKLVEA--LCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVEDH 66 IVL G+ AGK TQ+ ++V + + T +G SY+ K V D Sbjct: 3 IVLMGLPGAGKGTQAERIVAKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDE 62 Query: 67 S 67 Sbjct: 63 V 63 >1WCV-1 nrPDB Length = 257 Score = 27.4 bits (59), Expect = 5.0, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 13/37 (35%) Query: 16 RAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKL 52 GK+T + L L G R L+ + L Sbjct: 17 GVGKTTTAINLAAYLARLGKRVLLVDLDPQGNATSGL 53 >5I4E-A nrPDB Length = 980 Score = 27.4 bits (59), Expect = 5.2, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 3/56 (5%) Query: 9 IVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVE 64 I+ G AGK+ ++K+++ L + + P G+L LQ +E Sbjct: 148 ILCTGESGAGKTENTKKVIQYLAHVASSPKGRKEPG---VPGELERQLLQANPILE 200 >5DO7-A nrPDB Length = 666 Score = 27.4 bits (59), Expect = 5.3, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 14/29 (48%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEALCAAG 34 G ++ + G +GK+T + L AG Sbjct: 79 GQIMCILGSSGSGKTTLLDAMSGRLGRAG 107 >1NKS-A nrPDB Length = 194 Score = 27.0 bits (58), Expect = 5.7, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 15/30 (50%) Query: 13 GVDRAGKSTQSRKLVEALCAAGHRAELLRF 42 G+ GKST K+ E L G +++ + Sbjct: 8 GIPGVGKSTVLAKVKEILDNQGINNKIINY 37 >2PCL-A nrPDB Length = 224 Score = 27.0 bits (58), Expect = 5.9, Method: Composition-based stats. Identities = 7/26 (26%), Positives = 14/26 (53%) Query: 1 MAARRGALIVLEGVDRAGKSTQSRKL 26 ++ ++G + + G +GKST L Sbjct: 25 LSVKKGEFVSIIGASGSGKSTLLYIL 50 >2BDT-A nrPDB Length = 189 Score = 27.0 bits (58), Expect = 5.9, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 14/29 (48%) Query: 7 ALIVLEGVDRAGKSTQSRKLVEALCAAGH 35 L ++ G GKST ++L L + + Sbjct: 3 KLYIITGPAGVGKSTTCKRLAAQLDNSAY 31 >1L2T-A nrPDB Length = 235 Score = 27.0 bits (58), Expect = 6.1, Method: Composition-based stats. Identities = 6/23 (26%), Positives = 11/23 (47%) Query: 4 RRGALIVLEGVDRAGKSTQSRKL 26 + G + + G +GKST + Sbjct: 29 KEGEFVSIMGPSGSGKSTMLNII 51 >5L3S-B nrPDB Length = 296 Score = 27.0 bits (58), Expect = 6.5, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 18/38 (47%) Query: 2 AARRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAEL 39 + ++ +I+ GV+ GK+T K+V L + Sbjct: 97 SGKKPFVIIFFGVNGVGKTTTIAKVVNMLKKNNLSTII 134 >6C2V-A nrPDB Length = 115 Score = 26.6 bits (57), Expect = 7.9, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAG-HRAELLRFPERSTEIGK 51 R ++V+ G +GKST ++ + + + AG E+ E + K Sbjct: 53 RNADIVVIVGPSGSGKSTLAKIVKKIIARAGAKTIEVTTEEELRKAVAK 101 >1VIA-A nrPDB Length = 175 Score = 26.6 bits (57), Expect = 8.9, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 13/25 (52%) Query: 6 GALIVLEGVDRAGKSTQSRKLVEAL 30 IV G +GKST +R L + L Sbjct: 4 AKNIVFIGFMGSGKSTLARALAKDL 28 >2IYT-A nrPDB Length = 184 Score = 26.2 bits (56), Expect = 9.7, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 21/46 (45%) Query: 10 VLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSS 55 VL G+ +GKST R+L +AL ++ I + ++ Sbjct: 6 VLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFAT 51 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.132 0.340 Lambda K H 0.267 0.0406 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,220,334 Number of Sequences: 36641 Number of extensions: 248290 Number of successful extensions: 1359 Number of sequences better than 10.0: 193 Number of HSP's better than 10.0 without gapping: 165 Number of HSP's successfully gapped in prelim test: 65 Number of HSP's that attempted gapping in prelim test: 1101 Number of HSP's gapped (non-prelim): 249 length of query: 212 length of database: 10,336,785 effective HSP length: 93 effective length of query: 119 effective length of database: 6,929,172 effective search space: 824571468 effective search space used: 824571468 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 57 (26.6 bits)