BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= P22234
(425 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
2H31-A nrPDB 878 0.0
4JA0-A nrPDB 509 e-144
3NUA-A nrPDB 128 5e-30
2YZL-A nrPDB 120 1e-27
2YWV-A nrPDB 120 1e-27
4FGR-A nrPDB 119 3e-27
3RGG-A nrPDB 114 7e-26
2GQS-A nrPDB 112 4e-25
4O82-A nrPDB 110 2e-24
3KRE-A nrPDB 100 1e-21
1KUT-A nrPDB 92 6e-19
2YWX-A nrPDB 69 3e-12
1O4V-A nrPDB 59 3e-09
3LP6-A nrPDB 54 2e-07
1OBG-A nrPDB 53 3e-07
4AY3-A nrPDB 51 1e-06
3TRH-A nrPDB 49 3e-06
6O55-A nrPDB 48 7e-06
1QCZ-A nrPDB 48 7e-06
3KUU-A nrPDB 48 8e-06
3R9R-A nrPDB 48 9e-06
3OPQ-A nrPDB 47 2e-05
4GRD-A nrPDB 44 2e-04
3ORS-A nrPDB 37 0.020
5CLI-A nrPDB 32 0.43
4O5V-A nrPDB 30 1.9
1LAP-A nrPDB 30 2.9
1JAD-A nrPDB 29 3.1
4R0C-A nrPDB 29 3.8
4V8R-AE nrPDB 28 7.5
>2H31-A nrPDB
Length = 425
Score = 878 bits (2269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/425 (100%), Positives = 425/425 (100%)
Query: 1 MATAEVLNIGKKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKI 60
MATAEVLNIGKKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKI
Sbjct: 1 MATAEVLNIGKKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKI 60
Query: 61 TSCIFQLLQEAGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYK 120
TSCIFQLLQEAGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYK
Sbjct: 61 TSCIFQLLQEAGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYK 120
Query: 121 FYPPKVELFFKDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSW 180
FYPPKVELFFKDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSW
Sbjct: 121 FYPPKVELFFKDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSW 180
Query: 181 LPQNCTLVDMKIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPE 240
LPQNCTLVDMKIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPE
Sbjct: 181 LPQNCTLVDMKIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPE 240
Query: 241 GLQMVKKNFEWVAERVELLLKSESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVT 300
GLQMVKKNFEWVAERVELLLKSESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVT
Sbjct: 241 GLQMVKKNFEWVAERVELLLKSESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVT 300
Query: 301 SAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQ 360
SAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQ
Sbjct: 301 SAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQ 360
Query: 361 DVWSSLRLPSGLGCSTVLSPEGSAQFAAQIFGLSNHLVWSKLRASILNTWISLKQADKKI 420
DVWSSLRLPSGLGCSTVLSPEGSAQFAAQIFGLSNHLVWSKLRASILNTWISLKQADKKI
Sbjct: 361 DVWSSLRLPSGLGCSTVLSPEGSAQFAAQIFGLSNHLVWSKLRASILNTWISLKQADKKI 420
Query: 421 RECNL 425
RECNL
Sbjct: 421 RECNL 425
>4JA0-A nrPDB
Length = 425
Score = 509 bits (1310), Expect = e-144, Method: Compositional matrix adjust.
Identities = 249/413 (60%), Positives = 314/413 (76%), Gaps = 3/413 (0%)
Query: 9 IGKKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLL 68
+GK L EGKTK+V+++ D PG LL +KD+ITAG+ + + LEGKAAISN+ + +F++L
Sbjct: 12 LGKLLIEGKTKQVFDVPDQPGYCLLLNKDRITAGDGVKAHDLEGKAAISNQTNAKVFEIL 71
Query: 69 QEAGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVEL 128
+ AGIKTAF + ETAF++ +CEMIPIEWV RR+ATGSFLKRNPGV EG++F PPK E
Sbjct: 72 KSAGIKTAFVKIASETAFLSKKCEMIPIEWVTRRLATGSFLKRNPGVPEGFRFTPPKQET 131
Query: 129 FFKDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLV 188
FFKDDAN+DPQWSEEQ+I+AKF + GLLIG+ EVD M AT IFEILEK+W ++C L+
Sbjct: 132 FFKDDANHDPQWSEEQIISAKFNYNGLLIGRDEVDYMRKATILIFEILEKAWALRDCALI 191
Query: 189 DMKIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMVKKN 248
DMKIEFGVD T IVLADVID+DSWRLWPSGD+ DKQ YR+L VT L VK+N
Sbjct: 192 DMKIEFGVD-TEGSIVLADVIDSDSWRLWPSGDKRLMVDKQVYRNLTTVTAADLDTVKRN 250
Query: 249 FEWVAERVELLLKSESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDE 308
F WV ++++ LK +VVV MGS +D HC+KI KA G+ +LRVTSAHK +E
Sbjct: 251 FAWVKDQLD-FLKPTIHHKVVVFMGSPADQEHCQKIAKAARELGLDVDLRVTSAHKATEE 309
Query: 309 TLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRL 368
TLRI +YE VF+AVAGRSNGLGPV+SGNT+YPVI+CPP + D VQD+WSSL +
Sbjct: 310 TLRIMQQYEDTHGALVFIAVAGRSNGLGPVLSGNTSYPVINCPPPS-DKLVQDIWSSLSV 368
Query: 369 PSGLGCSTVLSPEGSAQFAAQIFGLSNHLVWSKLRASILNTWISLKQADKKIR 421
PSGLGC+TV+ P+ +A AAQI GL ++LVW +LR+ L+ SL+QADKK+R
Sbjct: 369 PSGLGCATVIYPDSAALMAAQIIGLQDYLVWGRLRSKQLDMAHSLRQADKKLR 421
>3NUA-A nrPDB
Length = 238
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 122/223 (54%), Gaps = 17/223 (7%)
Query: 13 LYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQEAG 72
LYEGK K++Y D V++ KD TA N +K +E K ++N+ITS IF++L + G
Sbjct: 11 LYEGKAKKIY-ATDKEDMVIVHYKDDATAFNGEKKAQIESKGVLNNEITSLIFEMLNKEG 69
Query: 73 IKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFFKD 132
IKT F K + + + E++P+E + R +A GS KR G++EGY+ EL +KD
Sbjct: 70 IKTHFVEKLNDRDQLCKKVEIVPLEVIVRNVAAGSMAKR-LGLEEGYELKTTVFELSYKD 128
Query: 133 DANNDPQWSEEQLIAAKFCFAGLLIGQT---EVDIMSHATQAIFEILEKSWLPQNCTLVD 189
D+ DP ++ + IG T E++ + T + EIL++++ QN L+D
Sbjct: 129 DSLGDPLINDYHAVG---------IGATTFEELNKIYEITAKVNEILKEAFKKQNINLID 179
Query: 190 MKIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYR 232
K+EFG EI+LAD I D+ R W + ++ DK +R
Sbjct: 180 FKLEFGR--YNGEILLADEISPDTCRFWDAT-TGEKMDKDRFR 219
>2YZL-A nrPDB
Length = 242
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 135/249 (54%), Gaps = 22/249 (8%)
Query: 13 LYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQEAG 72
LY GK K +YE+ D KVL++ +D ITAGN A+ + +GK ++ I+S +F+ L+E G
Sbjct: 14 LYSGKAKSIYEIDDD--KVLIEFRDDITAGNGAKHDVKQGKGYLNALISSKLFEALEENG 71
Query: 73 IKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFFKD 132
+KT + + IA + E+IPIE + R IA GS +R P +EG + P V+ +K+
Sbjct: 72 VKTHYIKYIEPRYMIAKKVEIIPIEVIVRNIAAGSLCRRYP-FEEGKELPFPIVQFDYKN 130
Query: 133 DANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDMKI 192
D DP +E+ IA A + E++ + + E+L+K + + LVD KI
Sbjct: 131 DEYGDPMLNED--IAVALGLA----TREELNKIKEIALKVNEVLKKLFDEKGIILVDFKI 184
Query: 193 EFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDL--KEVTPEGLQMVKKNFE 250
E G D +++AD I D+ RLW DK++ RD+ K+V + L V +
Sbjct: 185 EIGKD-REGNLLVADEISPDTMRLW---------DKET-RDVLDKDVFRKDLGDVIAKYR 233
Query: 251 WVAERVELL 259
VAER+ LL
Sbjct: 234 IVAERLGLL 242
>2YWV-A nrPDB
Length = 244
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 119/227 (52%), Gaps = 11/227 (4%)
Query: 13 LYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQEAG 72
LYEGK K++Y D P + ++ KD TA N +K + GK ++N+I+S +F L+EAG
Sbjct: 10 LYEGKAKKIYAT-DEPDVLWVEYKDSATAFNGEKKATIAGKGRLNNEISSLLFLKLREAG 68
Query: 73 IKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFFKD 132
I F K T + + +IP+E V R + GS KR G++EG P VE ++K+
Sbjct: 69 IANHFIEKLSPTEQLVRRVTIIPLEVVVRNVVAGSLAKR-IGLEEGTPLEAPLVEFYYKN 127
Query: 133 DANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDMKI 192
D DP E+ + K L + EV + A A+ ++L + +N L+D K+
Sbjct: 128 DDLGDPLLLEDHIFILK------LASREEVAALKQAALAVNDVLRLHFAERNVRLIDFKL 181
Query: 193 EFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSY-RDLKEVT 238
EFG I+LAD I D+ RLW +++ DK + RDL +T
Sbjct: 182 EFG-RTADGAILLADEISPDTCRLW-DAKTNEKLDKDVFRRDLGSLT 226
>4FGR-A nrPDB
Length = 255
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 125/242 (51%), Gaps = 20/242 (8%)
Query: 13 LYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQEAG 72
+Y GK K++Y D ++ KDQ TA N +K + GK ++N+I+S IF+ L AG
Sbjct: 26 IYSGKAKDIYTTEDE-NLIISTYKDQATAFNGVKKEQIAGKGVLNNQISSFIFEKLNVAG 84
Query: 73 IKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFFKD 132
+ T F K +T + + ++IP+E V R GSF KR GV EG P VE ++K+
Sbjct: 85 VATHFVEKLSDTEQLNKKVKIIPLEVVLRNYTAGSFSKR-FGVDEGIALETPIVEFYYKN 143
Query: 133 DANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQ-NCTLVDMK 191
D +DP ++E + KF + G ++ + T+ I E+L K W + L+D K
Sbjct: 144 DDLDDPFINDEHV---KFL---QIAGDQQIAYLKEETRRINELL-KVWFAEIGLKLIDFK 196
Query: 192 IEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYR-------DLKEVTPEGLQM 244
+EFG D K I+LAD D+ RLW + DK +R D+ E+ E LQ
Sbjct: 197 LEFGFDKDGK-IILADEFSPDNCRLWDAD--GNHMDKDVFRRGLGELTDVYEIVWEKLQE 253
Query: 245 VK 246
+K
Sbjct: 254 LK 255
>3RGG-A nrPDB
Length = 159
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 90/154 (58%)
Query: 268 VVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVA 327
V++LMGS+SD+GH EKI FGI +R+ SAHK + + + EYE P +++
Sbjct: 5 VIILMGSSSDMGHAEKIASELKTFGIEYAIRIGSAHKTAEHVVSMLKEYEALDRPKLYIT 64
Query: 328 VAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPSGLGCSTVLSPEGSAQFA 387
+AGRSN L + G I+CPP + + D++SSLR+PSG+ + VL P+ +A A
Sbjct: 65 IAGRSNALSGFVDGFVKGATIACPPPSDSFAGADIYSSLRMPSGISPALVLEPKNAALLA 124
Query: 388 AQIFGLSNHLVWSKLRASILNTWISLKQADKKIR 421
A+IF L + + +++ + + + + D K++
Sbjct: 125 ARIFSLYDKEIADSVKSYMESNAQKIIEDDSKLK 158
>2GQS-A nrPDB
Length = 237
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 113/221 (51%), Gaps = 11/221 (4%)
Query: 12 KLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQEA 71
+LY GK K VY ++P ++L+ ++ +AG+ AR + K ++NK I L EA
Sbjct: 6 ELYRGKAKTVYST-ENPDLLVLEFRNDTSAGDGARIEQFDRKGMVNNKFNYFIMSKLAEA 64
Query: 72 GIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFFK 131
GI T R +T + + +M+P+E V R A GS +KR G++EG + PP +LF K
Sbjct: 65 GIPTQMERLLSDTECLVKKLDMVPVECVVRNRAAGSLVKR-LGIEEGIELNPPLFDLFLK 123
Query: 132 DDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDMK 191
+DA +DP +E +C + + + M T ++L+K + LVD K
Sbjct: 124 NDAMHDPMVNE------SYCETFGWVSKENLARMKELTYKANDVLKKLFDDAGLILVDFK 177
Query: 192 IEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYR 232
+EFG + E+VL D D RLW + ++ DK +R
Sbjct: 178 LEFG--LYKGEVVLGDEFSPDGSRLWDK-ETLEKMDKDRFR 215
>4O82-A nrPDB
Length = 238
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 115/218 (52%), Gaps = 14/218 (6%)
Query: 12 KLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQEA 71
++YEGK K++ + D K++++ KD TA + +K +GK ++ +++ F+LL+E
Sbjct: 6 EVYEGKAKKMIPIDDD--KLIMEFKDDATAFDGTKKARFKGKGWLNAQLSVIFFKLLEEH 63
Query: 72 GIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFFK 131
GIKT F G I + +M P+E V R + GS KR P + EGY+ P VEL++K
Sbjct: 64 GIKTHFIGVAGGNRLIVEKLDMYPLEVVVRNVVAGSLKKRLP-LPEGYELPEPIVELYYK 122
Query: 132 DDANNDPQWSEEQLIAAKFCFAGLL-IGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDM 190
+D +DP + + A +L I E+ + + EIL+ + LVD
Sbjct: 123 NDELHDPMIN--------YYHAKVLGISLDEIKKIEEIALKVNEILKDYLAKKGIILVDF 174
Query: 191 KIEFGVDVTTKEIVLADVIDNDSWRLWPSG-DRSQQKD 227
K+EFG D +IVLAD I D+ R W + RS KD
Sbjct: 175 KLEFGKD-KNGDIVLADEISPDTCRFWDAKTKRSLDKD 211
>3KRE-A nrPDB
Length = 263
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 118/224 (52%), Gaps = 11/224 (4%)
Query: 11 KKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQE 70
+K+YEGK K ++ L+ P +V+ KD+ITA N + + K ++N I+S + + L +
Sbjct: 26 EKIYEGKAKIIFATLN-PLEVIQHFKDEITAFNNKKAAIIHEKGILNNYISSFLMKKLID 84
Query: 71 AGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFF 130
GIKT F + + + +IPIE V R +A G+F KR + +G F P +E ++
Sbjct: 85 KGIKTHFISLLNQREQLVKKITIIPIEVVIRNLAAGNFSKR-FQIADGTPFKSPIIEFYY 143
Query: 131 KDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDM 190
K+D +DP SE +++ ++ + E++ + + I IL + + LVD
Sbjct: 144 KNDELSDPMVSEGHILSFQW------LTNQELEKIKILSLKINNILSELFFNVGIKLVDF 197
Query: 191 KIEFGV--DVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYR 232
K+EFG + ++ LAD I D+ RLW +++ DK YR
Sbjct: 198 KLEFGKLHNDEQSDLFLADEISPDTCRLWDIS-TNKRLDKDRYR 240
>1KUT-A nrPDB
Length = 230
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 102/223 (45%), Gaps = 22/223 (9%)
Query: 14 YEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQEAGI 73
YEGKTK V D LL+ KD ITAG+ + + L GK +I + T+ + + L E GI
Sbjct: 3 YEGKTKIVKVTGDY---ALLEFKDDITAGDGLKHDVLTGKGSICAETTAILMKYLSEKGI 59
Query: 74 KTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFFKDD 133
KT +M P+E V R GSF++R G EG P VE F KDD
Sbjct: 60 KTHLVEYIPPRTLKVIPLKMFPLEVVVRLKKAGSFVRRYGGA-EGEDLPVPLVEFFIKDD 118
Query: 134 ANNDPQWSEEQL----IAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVD 189
+DP + L IA K + + M A I L++ + N L D
Sbjct: 119 ERHDPMVCVDHLEILGIATK----------KQAEKMKEAAVKITLALKEFFERANFELWD 168
Query: 190 MKIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYR 232
+K EFG+D +VL D I D++RL G + DK YR
Sbjct: 169 IKYEFGLD-KDGNVVLGDEISPDTFRLRKKG---EIFDKDVYR 207
>2YWX-A nrPDB
Length = 157
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
Query: 270 VLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVA 329
++MGS SDL EK FG+ E+RV SAH+ P+ I + D VF+A+A
Sbjct: 4 IIMGSESDLKIAEKAVNILKEFGVEFEVRVASAHRTPELVEEIVKNSKAD----VFIAIA 59
Query: 330 GRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPSGLGCSTVLSPEG--SAQFA 387
G + L V++ T PVI+ P G+ + SS+++P G+ +TV G +A A
Sbjct: 60 GLAAHLPGVVASLTTKPVIAVPVDAKLDGLDALLSSVQMPPGIPVATVGIDRGENAAILA 119
Query: 388 AQIFGLSNHLVWSKL 402
+I L + + KL
Sbjct: 120 LEILALKDENIAKKL 134
>1O4V-A nrPDB
Length = 183
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 267 RVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFV 326
RV ++MGS SDL ++ + FGI E+ + SAH+ PD E GI V +
Sbjct: 15 RVGIIMGSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEERGI-EVII 73
Query: 327 AVAGRSNGLGPVMSGNTAYPVISCPPLTPDW-GVQDVWSSLRLPSGLGCSTVL--SPEGS 383
A AG + L +++ T PVI P T G+ ++S +++P G+ +TV + + +
Sbjct: 74 AGAGGAAHLPGMVASITHLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAINNAKNA 133
Query: 384 AQFAAQIFGLSNHLVWSKLR 403
AA I G+ + K++
Sbjct: 134 GILAASILGIKYPEIARKVK 153
>3LP6-A nrPDB
Length = 174
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 265 QCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTV 324
+ RV V+MGS SD A F IP E+RV SAH+ P+ G+ V
Sbjct: 7 RPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGL-EV 65
Query: 325 FVAVAGRSNGLGPVMSGNTAYPVISCP-PLTPDWGVQDVWSSLRLPSGLGCSTV-LSPEG 382
+A AG + L +++ T PVI P PL G+ + S +++P+G+ +TV + G
Sbjct: 66 IIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAG 125
Query: 383 SAQ-FAAQIFGLSNHLVWSKLRASIL 407
+A A ++ G +N +LRA I+
Sbjct: 126 NAGLLAVRMLGAAN----PQLRARIV 147
>1OBG-A nrPDB
Length = 305
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 104/257 (40%), Gaps = 48/257 (18%)
Query: 16 GKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQE----- 70
GK +++YE+ G +L + D+I+A + +N + K + K++ F+ L
Sbjct: 17 GKVRDIYEV--DAGTLLFVATDRISAYDVIMENSIPEKGILLTKLSEFWFKFLSNDVRNH 74
Query: 71 ----AGIKTAFTR------------KCGETAFIAPQCEMIPIEWVCRRIATGSF------ 108
A KT F + + + + + ++IP+E + R TGS
Sbjct: 75 LVDIAPGKTIFDYLPAKLSEPKYKTQLEDRSLLVHKHKLIPLEVIVRGYITGSAWKEYVK 134
Query: 109 ------LKRNPGVKEGYKFYPPKVELFFKDDANNDPQWSEEQLIAAKFCFAGLLIGQTEV 162
LK+ G+KE +F P F + +E + A+ A L+G+
Sbjct: 135 TGTVHGLKQPQGLKESQEFPEP----IFTPSTKAEQGEHDENISPAQ---AAELVGEDLS 187
Query: 163 DIMSHATQAIFEILEKSWLPQNCTLVDMKIEFGVDVTTKEIVLAD-VIDNDSWRLWPS-- 219
++ ++ + + + D K EFG+D T EI+L D V+ DS R W
Sbjct: 188 RRVAELAVKLYSKCKDYAKEKGIIIADTKFEFGIDEKTNEIILVDEVLTPDSSRFWNGAS 247
Query: 220 ---GDRSQQKDKQSYRD 233
G+ DKQ RD
Sbjct: 248 YKVGESQDSYDKQFLRD 264
>4AY3-A nrPDB
Length = 181
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 262 SESQCRVVVLMGSTSDLGHCEKIKKACG---NFGIPCELRVTSAHKGPDETLRIKAEYEG 318
S + V V+MGSTSD E +K AC IP E +V SAH+ PD
Sbjct: 19 SHMKSLVGVIMGSTSD---WETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARE 75
Query: 319 DGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDW-GVQDVWSSLRLPSGLGCSTV 377
G+ V +A AG + L +++ T PVI P + G+ + S +++P G+ +TV
Sbjct: 76 RGL-KVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATV 134
Query: 378 -LSPEGSAQ---FAAQIFG 392
+ GS AAQI G
Sbjct: 135 AIGKAGSTNAGLLAAQILG 153
>3TRH-A nrPDB
Length = 169
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 268 VVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVA 327
V +LMGS SDL E + GIP E + SAH+ P ET+ + G VF+A
Sbjct: 9 VAILMGSDSDLSTMETAFTELKSLGIPFEAHILSAHRTPKETVEFVENADNRGC-AVFIA 67
Query: 328 VAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQD-VWSSLRLPSG--LGCSTV 377
AG + L ++ +T PVI P G D + S++++P G + C+ +
Sbjct: 68 AAGLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAI 120
>6O55-A nrPDB
Length = 174
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 270 VLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVA 329
++MGS SD I E + SAH+ PD+ R + E G+ V +A A
Sbjct: 16 LIMGSQSDWQTLIHAAHTLDALNIGYEAEIVSAHRTPDKLFRYAEQAEARGL-EVIIAGA 74
Query: 330 GRSNGLGPVMSGNTAYPVISCPPLTPDW-GVQDVWSSLRLPSGLGCSTV-LSPEG---SA 384
G + L +++ T+ PV+ P ++ GV + S +++P+G+ T+ + G SA
Sbjct: 75 GGAAHLPGMVAAKTSLPVLGVPVMSQTLNGVDSLLSIVQMPAGIPVGTLSIGKAGAINSA 134
Query: 385 QFAAQIF 391
FAA I
Sbjct: 135 LFAAAIL 141
>1QCZ-A nrPDB
Length = 169
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Query: 266 CRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVF 325
RV ++MGS SD + + +P + V SAH+ PD+ E +G V
Sbjct: 8 ARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGY-QVI 66
Query: 326 VAVAGRSNGLGPVMSGNTAYPVISCPPLTPDW-GVQDVWSSLRLPSGLGCSTV 377
+A AG + L +++ T PV+ P + GV ++S +++P G+ T+
Sbjct: 67 IAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTL 119
>3KUU-A nrPDB
Length = 174
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Query: 266 CRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVF 325
++ ++MGS SD + +P + V SAH+ PD + E +G+ V
Sbjct: 13 VKIAIVMGSKSDWATMQFAADVLTTLNVPFHVEVVSAHRTPDRLFSFAEQAEANGL-HVI 71
Query: 326 VAVAGRSNGLGPVMSGNTAYPVISCPPLTPDW-GVQDVWSSLRLPSGLGCSTV 377
+A G + L +++ T PV+ P + GV ++S +++P G+ T+
Sbjct: 72 IAGNGGAAHLPGMLAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTL 124
>3R9R-A nrPDB
Length = 301
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 85/225 (37%), Gaps = 27/225 (12%)
Query: 11 KKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLL-- 68
+ + GK +E+Y + D +L + D+I+A + + K I ++ F LL
Sbjct: 13 QHVASGKVRELYRVDDE--HLLFVATDRISAFDFVLDTPIPDKGRILTAMSVFFFGLLTV 70
Query: 69 --QEAGI--KTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFL---KRN--------- 112
AG + A + + +M+P+E V R TGS L +R
Sbjct: 71 PNHLAGPPDDPRIPEEVLGRALLVRRLDMLPVECVARGYLTGSGLLDYQRTGAVCGHVLP 130
Query: 113 PGVKEGYKFYPPKVELFFKDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAI 172
G+ E + PP K D E + F L+G + + T I
Sbjct: 131 QGLGEASRLDPPLFTPATKADIG-------EHDMNVDFAAVVGLVGAVRANQLRDETIKI 183
Query: 173 FEILEKSWLPQNCTLVDMKIEFGVDVTTKEIVLADVIDNDSWRLW 217
+ L + L D K EFGVD+ ++ +V DS R W
Sbjct: 184 YTRAAAHALHKGIILADTKFEFGVDIEGNLVLADEVFTPDSSRYW 228
>3OPQ-A nrPDB
Length = 163
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 267 RVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFV 326
+V V+MGS SD ++ N GI E V SAH+ PD+ + G+ V +
Sbjct: 4 QVGVIMGSKSDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERGL-KVII 62
Query: 327 AVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQD-VWSSLRLPSGLGCSTVLSPEGSAQ 385
A AG + L +++ T PV+ P + QD + S +++P+G+ +T
Sbjct: 63 AGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVAT--------- 113
Query: 386 FAAQIFGLSNHLVWSKLRASIL-NTWISLKQADKKIR 421
FA + G N +++ ASIL +T I++ +A + R
Sbjct: 114 FAIGMAGAKNAALFA---ASILQHTDINIAKALAEFR 147
>4GRD-A nrPDB
Length = 173
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Query: 261 KSESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDG 320
+ S V VLMGS+SD + FG+P E +V SAH+ PDE + G
Sbjct: 8 HTHSAPLVGVLMGSSSDWDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARERG 67
Query: 321 IPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDW-GVQDVWSSLRLPSGLGCST 376
+ + G ++ G +++ T PV+ P + GV + S +++P G+ +T
Sbjct: 68 LRAIIAGAGGAAHLPG-MLAAKTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVAT 123
>3ORS-A nrPDB
Length = 163
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 267 RVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFV 326
+V V+MGS+SD ++ F IP E +V SAH+ P ++ +E GI +
Sbjct: 5 KVAVIMGSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARERGINIIIA 64
Query: 327 AVAGRSNGLGPVMSGNTAYPVISCPPLTPDW-GVQDVWSSLRLPSGL 372
G ++ G V S T PVI P T G+ + S +++P G+
Sbjct: 65 GAGGAAHLPGMVASLTT-LPVIGVPIETKSLKGIDSLLSIVQMPGGI 110
>5CLI-A nrPDB
Length = 183
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Query: 261 KSESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDG 320
K+ S V ++MGS SD IP E + SAH+ PD G
Sbjct: 18 KAASAPVVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERG 77
Query: 321 IPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDW-GVQDVWSSLRLPSGLGCSTV 377
+ V +A AG + L + + T PV+ P + G+ + S +++P G+ T+
Sbjct: 78 L-NVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTL 134
>4O5V-A nrPDB
Length = 239
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 9/134 (6%)
Query: 205 LADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMVKKNFEWVAERVELLLKSES 264
+A+ I+ +RL PSGDR + + +R + + + + + + A +E + E
Sbjct: 75 MAEKIERGKYRLTPSGDREANRFLRKHRTAEILLSRCIGIPWERVDEEAMGIEHGMTEEI 134
Query: 265 QCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRI-KAEYEGDGIPT 323
R + G H I GN ++R+TS PD T RI + YE D I
Sbjct: 135 IQRTIERFG-VDRCPHGNPIPDPEGNVEPVADVRITSLL--PDSTARISRIVYETDDI-L 190
Query: 324 VFVAVAGRSNGLGP 337
F+A+ NGL P
Sbjct: 191 HFLAL----NGLIP 200
>1LAP-A nrPDB
Length = 487
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 5 EVLNI-GKKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSC 63
E+LNI G L GKT+ Y L + V++ + TAG ++N EGK I + +
Sbjct: 37 EILNISGPPLKAGKTRTFYGLHEDFPSVVVVGLGKKTAGIDEQENWHEGKENIRAAVAAG 96
Query: 64 IFQLLQEAGIKTAFTRKCGE 83
Q +Q+ I + CG+
Sbjct: 97 CRQ-IQDLEIPSVEVDPCGD 115
>1JAD-A nrPDB
Length = 251
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 11/60 (18%)
Query: 234 LKEVTPEGLQMVKKNFEWVAERVELLLKSESQCRVVVLMGSTSDLGHCEKIKKACGNFGI 293
LKE + ++ +KK E A+R++ R+ V+M STSD E++KK N I
Sbjct: 128 LKESSESNIKDIKKKLE--AKRLD---------RIQVMMRSTSDKAAQERLKKEINNSHI 176
>4R0C-A nrPDB
Length = 492
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 296 ELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPV 338
L VT+ H DET+ + + DG+ +F + G G P+
Sbjct: 41 ALDVTATHPLTDETITAHSLLDADGLRYLFTTLVGNFTGFAPL 83
>4V8R-AE nrPDB
Length = 562
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 114 GVKEGYKFYPPKVELFFKD-DANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAI 172
G E K K+E D A+ND + + L AAK ++ + A +A+
Sbjct: 149 GFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAV 208
Query: 173 FEILEKSWLPQNCTLVDMKIEFGVDVTTKEIVLADVIDND 212
+++K + L+ M+ G ++ +++ ++D D
Sbjct: 209 INVMDKDRKDVDFDLIKMQGRVGGSISDSKLINGVILDKD 248
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
2H31-A nrPDB 612 e-176
4JA0-A nrPDB 538 e-153
4FGR-A nrPDB 280 6e-76
2YZL-A nrPDB 276 1e-74
3NUA-A nrPDB 275 3e-74
2YWV-A nrPDB 275 4e-74
2GQS-A nrPDB 271 3e-73
3KRE-A nrPDB 271 6e-73
4O82-A nrPDB 263 1e-70
1KUT-A nrPDB 241 4e-64
3R9R-A nrPDB 218 3e-57
1OBG-A nrPDB 213 1e-55
3RGG-A nrPDB 194 7e-50
1O4V-A nrPDB 188 3e-48
4AY3-A nrPDB 186 1e-47
3OPQ-A nrPDB 184 6e-47
3LP6-A nrPDB 175 3e-44
6O55-A nrPDB 174 6e-44
3KUU-A nrPDB 162 2e-40
1QCZ-A nrPDB 162 2e-40
2YWX-A nrPDB 161 8e-40
4GRD-A nrPDB 157 1e-38
3TRH-A nrPDB 134 1e-31
Sequences not found previously or not previously below threshold:
5CLI-A nrPDB 152 4e-37
3ORS-A nrPDB 140 1e-33
4MCA-A nrPDB 34 0.14
4I61-A nrPDB 34 0.16
1U0T-A nrPDB 33 0.31
6DGE-A nrPDB 32 0.65
5FB3-A nrPDB 32 0.68
1TA9-A nrPDB 31 0.83
2P1R-A nrPDB 31 1.0
4M60-A nrPDB 31 1.2
5XIX-A nrPDB 30 1.7
3O8O-A nrPDB 30 1.8
2CI6-A nrPDB 30 1.8
5A7M-A nrPDB 30 1.8
4RFL-A nrPDB 30 1.9
3OZ7-A nrPDB 30 2.0
4RGQ-A nrPDB 30 2.0
1JNP-A nrPDB 30 2.7
1U6Z-A nrPDB 29 3.1
1JKX-A nrPDB 29 3.4
1A1S-A nrPDB 29 3.7
6MSD-Z nrPDB 29 6.4
5VFQ-Z nrPDB 28 6.7
3CVJ-A nrPDB 28 7.1
4YPN-A nrPDB 28 7.4
3A4L-A nrPDB 28 8.3
>2H31-A nrPDB
Length = 425
Score = 612 bits (1578), Expect = e-176, Method: Composition-based stats.
Identities = 425/425 (100%), Positives = 425/425 (100%)
Query: 1 MATAEVLNIGKKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKI 60
MATAEVLNIGKKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKI
Sbjct: 1 MATAEVLNIGKKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKI 60
Query: 61 TSCIFQLLQEAGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYK 120
TSCIFQLLQEAGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYK
Sbjct: 61 TSCIFQLLQEAGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYK 120
Query: 121 FYPPKVELFFKDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSW 180
FYPPKVELFFKDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSW
Sbjct: 121 FYPPKVELFFKDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSW 180
Query: 181 LPQNCTLVDMKIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPE 240
LPQNCTLVDMKIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPE
Sbjct: 181 LPQNCTLVDMKIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPE 240
Query: 241 GLQMVKKNFEWVAERVELLLKSESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVT 300
GLQMVKKNFEWVAERVELLLKSESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVT
Sbjct: 241 GLQMVKKNFEWVAERVELLLKSESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVT 300
Query: 301 SAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQ 360
SAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQ
Sbjct: 301 SAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQ 360
Query: 361 DVWSSLRLPSGLGCSTVLSPEGSAQFAAQIFGLSNHLVWSKLRASILNTWISLKQADKKI 420
DVWSSLRLPSGLGCSTVLSPEGSAQFAAQIFGLSNHLVWSKLRASILNTWISLKQADKKI
Sbjct: 361 DVWSSLRLPSGLGCSTVLSPEGSAQFAAQIFGLSNHLVWSKLRASILNTWISLKQADKKI 420
Query: 421 RECNL 425
RECNL
Sbjct: 421 RECNL 425
>4JA0-A nrPDB
Length = 425
Score = 538 bits (1387), Expect = e-153, Method: Composition-based stats.
Identities = 248/413 (60%), Positives = 313/413 (75%), Gaps = 3/413 (0%)
Query: 9 IGKKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLL 68
+GK L EGKTK+V+++ D PG LL +KD+ITAG+ + + LEGKAAISN+ + +F++L
Sbjct: 12 LGKLLIEGKTKQVFDVPDQPGYCLLLNKDRITAGDGVKAHDLEGKAAISNQTNAKVFEIL 71
Query: 69 QEAGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVEL 128
+ AGIKTAF + ETAF++ +CEMIPIEWV RR+ATGSFLKRNPGV EG++F PPK E
Sbjct: 72 KSAGIKTAFVKIASETAFLSKKCEMIPIEWVTRRLATGSFLKRNPGVPEGFRFTPPKQET 131
Query: 129 FFKDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLV 188
FFKDDAN+DPQWSEEQ+I+AKF + GLLIG+ EVD M AT IFEILEK+W ++C L+
Sbjct: 132 FFKDDANHDPQWSEEQIISAKFNYNGLLIGRDEVDYMRKATILIFEILEKAWALRDCALI 191
Query: 189 DMKIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMVKKN 248
DMKIEFGVD T IVLADVID+DSWRLWPSGD+ DKQ YR+L VT L VK+N
Sbjct: 192 DMKIEFGVD-TEGSIVLADVIDSDSWRLWPSGDKRLMVDKQVYRNLTTVTAADLDTVKRN 250
Query: 249 FEWVAERVELLLKSESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDE 308
F WV ++++ LK +VVV MGS +D HC+KI KA G+ +LRVTSAHK +E
Sbjct: 251 FAWVKDQLD-FLKPTIHHKVVVFMGSPADQEHCQKIAKAARELGLDVDLRVTSAHKATEE 309
Query: 309 TLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRL 368
TLRI +YE VF+AVAGRSNGLGPV+SGNT+YPVI+CPP + VQD+WSSL +
Sbjct: 310 TLRIMQQYEDTHGALVFIAVAGRSNGLGPVLSGNTSYPVINCPPPSDKL-VQDIWSSLSV 368
Query: 369 PSGLGCSTVLSPEGSAQFAAQIFGLSNHLVWSKLRASILNTWISLKQADKKIR 421
PSGLGC+TV+ P+ +A AAQI GL ++LVW +LR+ L+ SL+QADKK+R
Sbjct: 369 PSGLGCATVIYPDSAALMAAQIIGLQDYLVWGRLRSKQLDMAHSLRQADKKLR 421
>4FGR-A nrPDB
Length = 255
Score = 280 bits (717), Expect = 6e-76, Method: Composition-based stats.
Identities = 78/243 (32%), Positives = 124/243 (51%), Gaps = 18/243 (7%)
Query: 11 KKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQE 70
+ +Y GK K++Y D ++ KDQ TA N +K + GK ++N+I+S IF+ L
Sbjct: 24 QLIYSGKAKDIYTTEDE-NLIISTYKDQATAFNGVKKEQIAGKGVLNNQISSFIFEKLNV 82
Query: 71 AGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFF 130
AG+ T F K +T + + ++IP+E V R GSF KR GV EG P VE ++
Sbjct: 83 AGVATHFVEKLSDTEQLNKKVKIIPLEVVLRNYTAGSFSKR-FGVDEGIALETPIVEFYY 141
Query: 131 KDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDM 190
K+D +DP ++E + + + G ++ + T+ I E+L+ + L+D
Sbjct: 142 KNDDLDDPFINDEHVKFLQ------IAGDQQIAYLKEETRRINELLKVWFAEIGLKLIDF 195
Query: 191 KIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYR-------DLKEVTPEGLQ 243
K+EFG D +I+LAD D+ RLW + DK +R D+ E+ E LQ
Sbjct: 196 KLEFGFD-KDGKIILADEFSPDNCRLWDAD--GNHMDKDVFRRGLGELTDVYEIVWEKLQ 252
Query: 244 MVK 246
+K
Sbjct: 253 ELK 255
>2YZL-A nrPDB
Length = 242
Score = 276 bits (705), Expect = 1e-74, Method: Composition-based stats.
Identities = 83/249 (33%), Positives = 130/249 (52%), Gaps = 18/249 (7%)
Query: 11 KKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQE 70
+ LY GK K +YE+ D KVL++ +D ITAGN A+ + +GK ++ I+S +F+ L+E
Sbjct: 12 QPLYSGKAKSIYEIDDD--KVLIEFRDDITAGNGAKHDVKQGKGYLNALISSKLFEALEE 69
Query: 71 AGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFF 130
G+KT + + IA + E+IPIE + R IA GS +R P +EG + P V+ +
Sbjct: 70 NGVKTHYIKYIEPRYMIAKKVEIIPIEVIVRNIAAGSLCRRYP-FEEGKELPFPIVQFDY 128
Query: 131 KDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDM 190
K+D DP +E+ A L + E++ + + E+L+K + + LVD
Sbjct: 129 KNDEYGDPMLNED------IAVALGLATREELNKIKEIALKVNEVLKKLFDEKGIILVDF 182
Query: 191 KIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMVKKNFE 250
KIE G D +++AD I D+ RLW + DK +R + L V +
Sbjct: 183 KIEIGKD-REGNLLVADEISPDTMRLWDK-ETRDVLDKDVFR-------KDLGDVIAKYR 233
Query: 251 WVAERVELL 259
VAER+ LL
Sbjct: 234 IVAERLGLL 242
>3NUA-A nrPDB
Length = 238
Score = 275 bits (703), Expect = 3e-74, Method: Composition-based stats.
Identities = 79/251 (31%), Positives = 129/251 (51%), Gaps = 18/251 (7%)
Query: 6 VLNIGKKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIF 65
++N + LYEGK K++Y D V++ KD TA N +K +E K ++N+ITS IF
Sbjct: 4 MVNQLEMLYEGKAKKIYAT-DKEDMVIVHYKDDATAFNGEKKAQIESKGVLNNEITSLIF 62
Query: 66 QLLQEAGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPK 125
++L + GIKT F K + + + E++P+E + R +A GS KR G++EGY+
Sbjct: 63 EMLNKEGIKTHFVEKLNDRDQLCKKVEIVPLEVIVRNVAAGSMAKR-LGLEEGYELKTTV 121
Query: 126 VELFFKDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNC 185
EL +KDD+ DP ++ + E++ + T + EIL++++ QN
Sbjct: 122 FELSYKDDSLGDPLINDYHAVGI------GATTFEELNKIYEITAKVNEILKEAFKKQNI 175
Query: 186 TLVDMKIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMV 245
L+D K+EFG EI+LAD I D+ R W + ++ DK +R + V
Sbjct: 176 NLIDFKLEFGR--YNGEILLADEISPDTCRFWDAT-TGEKMDKDRFR-------RDMGNV 225
Query: 246 KKNFEWVAERV 256
+ V R+
Sbjct: 226 INGYREVLNRL 236
>2YWV-A nrPDB
Length = 244
Score = 275 bits (702), Expect = 4e-74, Method: Composition-based stats.
Identities = 78/247 (31%), Positives = 125/247 (50%), Gaps = 17/247 (6%)
Query: 11 KKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQE 70
+ LYEGK K++Y D P + ++ KD TA N +K + GK ++N+I+S +F L+E
Sbjct: 8 QLLYEGKAKKIYAT-DEPDVLWVEYKDSATAFNGEKKATIAGKGRLNNEISSLLFLKLRE 66
Query: 71 AGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFF 130
AGI F K T + + +IP+E V R + GS KR G++EG P VE ++
Sbjct: 67 AGIANHFIEKLSPTEQLVRRVTIIPLEVVVRNVVAGSLAKR-IGLEEGTPLEAPLVEFYY 125
Query: 131 KDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDM 190
K+D DP E+ + K L + EV + A A+ ++L + +N L+D
Sbjct: 126 KNDDLGDPLLLEDHIFILK------LASREEVAALKQAALAVNDVLRLHFAERNVRLIDF 179
Query: 191 KIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMVKKNFE 250
K+EFG I+LAD I D+ RLW + +++ DK +R L + +E
Sbjct: 180 KLEFGR-TADGAILLADEISPDTCRLWDA-KTNEKLDKDVFR-------RDLGSLTDAYE 230
Query: 251 WVAERVE 257
+ +R+
Sbjct: 231 VILQRLG 237
>2GQS-A nrPDB
Length = 237
Score = 271 bits (693), Expect = 3e-73, Method: Composition-based stats.
Identities = 77/249 (30%), Positives = 125/249 (50%), Gaps = 18/249 (7%)
Query: 12 KLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQEA 71
+LY GK K VY ++P ++L+ ++ +AG+ AR + K ++NK I L EA
Sbjct: 6 ELYRGKAKTVYST-ENPDLLVLEFRNDTSAGDGARIEQFDRKGMVNNKFNYFIMSKLAEA 64
Query: 72 GIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFFK 131
GI T R +T + + +M+P+E V R A GS +KR G++EG + PP +LF K
Sbjct: 65 GIPTQMERLLSDTECLVKKLDMVPVECVVRNRAAGSLVKR-LGIEEGIELNPPLFDLFLK 123
Query: 132 DDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDMK 191
+DA +DP +E +C + + + M T ++L+K + LVD K
Sbjct: 124 NDAMHDPMVNE------SYCETFGWVSKENLARMKELTYKANDVLKKLFDDAGLILVDFK 177
Query: 192 IEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMVKKNFEW 251
+EFG+ E+VL D D RLW + ++ DK +R + L + + +E
Sbjct: 178 LEFGL--YKGEVVLGDEFSPDGSRLWDK-ETLEKMDKDRFR-------QSLGGLIEAYEA 227
Query: 252 VAERVELLL 260
VA R+ + L
Sbjct: 228 VARRLGVQL 236
>3KRE-A nrPDB
Length = 263
Score = 271 bits (692), Expect = 6e-73, Method: Composition-based stats.
Identities = 73/251 (29%), Positives = 127/251 (50%), Gaps = 18/251 (7%)
Query: 11 KKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQE 70
+K+YEGK K ++ L+ P +V+ KD+ITA N + + K ++N I+S + + L +
Sbjct: 26 EKIYEGKAKIIFATLN-PLEVIQHFKDEITAFNNKKAAIIHEKGILNNYISSFLMKKLID 84
Query: 71 AGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFF 130
GIKT F + + + +IPIE V R +A G+F KR + +G F P +E ++
Sbjct: 85 KGIKTHFISLLNQREQLVKKITIIPIEVVIRNLAAGNFSKR-FQIADGTPFKSPIIEFYY 143
Query: 131 KDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDM 190
K+D +DP SE +++ ++ + E++ + + I IL + + LVD
Sbjct: 144 KNDELSDPMVSEGHILSFQW------LTNQELEKIKILSLKINNILSELFFNVGIKLVDF 197
Query: 191 KIEFGV--DVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMVKKN 248
K+EFG + ++ LAD I D+ RLW +++ DK YR L V +
Sbjct: 198 KLEFGKLHNDEQSDLFLADEISPDTCRLWDIS-TNKRLDKDRYR-------LNLGNVIEG 249
Query: 249 FEWVAERVELL 259
+ VA ++ +
Sbjct: 250 YREVAHKLNAI 260
>4O82-A nrPDB
Length = 238
Score = 263 bits (671), Expect = 1e-70, Method: Composition-based stats.
Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 19/245 (7%)
Query: 12 KLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQEA 71
++YEGK K++ + D K++++ KD TA + +K +GK ++ +++ F+LL+E
Sbjct: 6 EVYEGKAKKMIPIDDD--KLIMEFKDDATAFDGTKKARFKGKGWLNAQLSVIFFKLLEEH 63
Query: 72 GIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFFK 131
GIKT F G I + +M P+E V R + GS KR P + EGY+ P VEL++K
Sbjct: 64 GIKTHFIGVAGGNRLIVEKLDMYPLEVVVRNVVAGSLKKRLP-LPEGYELPEPIVELYYK 122
Query: 132 DDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDMK 191
+D +DP + L I E+ + + EIL+ + LVD K
Sbjct: 123 NDELHDPMINYYH-------AKVLGISLDEIKKIEEIALKVNEILKDYLAKKGIILVDFK 175
Query: 192 IEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMVKKNFEW 251
+EFG D +IVLAD I D+ R W + + DK +R + + ++
Sbjct: 176 LEFGKD-KNGDIVLADEISPDTCRFWDA-KTKRSLDKDVFR-------FDKGDLIEAYKE 226
Query: 252 VAERV 256
+ ER+
Sbjct: 227 IYERI 231
>1KUT-A nrPDB
Length = 230
Score = 241 bits (615), Expect = 4e-64, Method: Composition-based stats.
Identities = 77/241 (31%), Positives = 106/241 (43%), Gaps = 21/241 (8%)
Query: 14 YEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQEAGI 73
YEGKTK V D LL+ KD ITAG+ + + L GK +I + T+ + + L E GI
Sbjct: 3 YEGKTKIVKVTGDYA---LLEFKDDITAGDGLKHDVLTGKGSICAETTAILMKYLSEKGI 59
Query: 74 KTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFFKDD 133
KT +M P+E V R GSF++R G EG P VE F KDD
Sbjct: 60 KTHLVEYIPPRTLKVIPLKMFPLEVVVRLKKAGSFVRRYGG-AEGEDLPVPLVEFFIKDD 118
Query: 134 ANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDMKIE 193
+DP + L + + + + M A I L++ + N L D+K E
Sbjct: 119 ERHDPMVCVDHL------EILGIATKKQAEKMKEAAVKITLALKEFFERANFELWDIKYE 172
Query: 194 FGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMVKKNFEWVA 253
FG+D +VL D I D++RL G + DK YR L K + V
Sbjct: 173 FGLD-KDGNVVLGDEISPDTFRLRKKG---EIFDKDVYR-------RDLGDPLKKYREVL 221
Query: 254 E 254
E
Sbjct: 222 E 222
>3R9R-A nrPDB
Length = 301
Score = 218 bits (556), Expect = 3e-57, Method: Composition-based stats.
Identities = 58/246 (23%), Positives = 92/246 (37%), Gaps = 32/246 (13%)
Query: 11 KKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLL-- 68
+ + GK +E+Y + D +L + D+I+A + + K I ++ F LL
Sbjct: 13 QHVASGKVRELYRVDDE--HLLFVATDRISAFDFVLDTPIPDKGRILTAMSVFFFGLLTV 70
Query: 69 --QEAGIK--TAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFL---KR---------N 112
AG + A + + +M+P+E V R TGS L +R
Sbjct: 71 PNHLAGPPDDPRIPEEVLGRALLVRRLDMLPVECVARGYLTGSGLLDYQRTGAVCGHVLP 130
Query: 113 PGVKEGYKFYPPKVELFFKDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAI 172
G+ E + PP K D E + F L+G + + T I
Sbjct: 131 QGLGEASRLDPPLFTPATKADIG-------EHDMNVDFAAVVGLVGAVRANQLRDETIKI 183
Query: 173 FEILEKSWLPQNCTLVDMKIEFGVDVTTKEIVLADVIDNDSWRLWPS-----GDRSQQKD 227
+ L + L D K EFGVD+ ++ +V DS R W + G D
Sbjct: 184 YTRAAAHALHKGIILADTKFEFGVDIEGNLVLADEVFTPDSSRYWDAAHYQPGVVQDSFD 243
Query: 228 KQSYRD 233
KQ R+
Sbjct: 244 KQFVRN 249
>1OBG-A nrPDB
Length = 305
Score = 213 bits (542), Expect = 1e-55, Method: Composition-based stats.
Identities = 59/260 (22%), Positives = 104/260 (40%), Gaps = 48/260 (18%)
Query: 13 LYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQE-- 70
+ GK +++YE+ G +L + D+I+A + +N + K + K++ F+ L
Sbjct: 14 VARGKVRDIYEV--DAGTLLFVATDRISAYDVIMENSIPEKGILLTKLSEFWFKFLSNDV 71
Query: 71 -------AGIKTAFTR------------KCGETAFIAPQCEMIPIEWVCRRIATGS---- 107
A KT F + + + + + ++IP+E + R TGS
Sbjct: 72 RNHLVDIAPGKTIFDYLPAKLSEPKYKTQLEDRSLLVHKHKLIPLEVIVRGYITGSAWKE 131
Query: 108 --------FLKRNPGVKEGYKFYPPKVELFFKDDANNDPQWSEEQLIAAKFCFAGLLIGQ 159
LK+ G+KE +F P K + +E + A+ A L+G+
Sbjct: 132 YVKTGTVHGLKQPQGLKESQEFPEPIFTPSTK----AEQGEHDENISPAQ---AAELVGE 184
Query: 160 TEVDIMSHATQAIFEILEKSWLPQNCTLVDMKIEFGVDVTTKEIVLADV-IDNDSWRLWP 218
++ ++ + + + D K EFG+D T EI+L D + DS R W
Sbjct: 185 DLSRRVAELAVKLYSKCKDYAKEKGIIIADTKFEFGIDEKTNEIILVDEVLTPDSSRFWN 244
Query: 219 S-----GDRSQQKDKQSYRD 233
G+ DKQ RD
Sbjct: 245 GASYKVGESQDSYDKQFLRD 264
>3RGG-A nrPDB
Length = 159
Score = 194 bits (492), Expect = 7e-50, Method: Composition-based stats.
Identities = 54/158 (34%), Positives = 91/158 (57%)
Query: 264 SQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPT 323
+ V++LMGS+SD+GH EKI FGI +R+ SAHK + + + EYE P
Sbjct: 1 MRPLVIILMGSSSDMGHAEKIASELKTFGIEYAIRIGSAHKTAEHVVSMLKEYEALDRPK 60
Query: 324 VFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPSGLGCSTVLSPEGS 383
+++ +AGRSN L + G I+CPP + + D++SSLR+PSG+ + VL P+ +
Sbjct: 61 LYITIAGRSNALSGFVDGFVKGATIACPPPSDSFAGADIYSSLRMPSGISPALVLEPKNA 120
Query: 384 AQFAAQIFGLSNHLVWSKLRASILNTWISLKQADKKIR 421
A AA+IF L + + +++ + + + + D K++
Sbjct: 121 ALLAARIFSLYDKEIADSVKSYMESNAQKIIEDDSKLK 158
>1O4V-A nrPDB
Length = 183
Score = 188 bits (478), Expect = 3e-48, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 4/160 (2%)
Query: 266 CRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVF 325
RV ++MGS SDL ++ + FGI E+ + SAH+ PD E GI V
Sbjct: 14 PRVGIIMGSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEERGI-EVI 72
Query: 326 VAVAGRSNGLGPVMSGNTAYPVISCPPLTPDW-GVQDVWSSLRLPSGLGCSTVL--SPEG 382
+A AG + L +++ T PVI P T G+ ++S +++P G+ +TV + +
Sbjct: 73 IAGAGGAAHLPGMVASITHLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAINNAKN 132
Query: 383 SAQFAAQIFGLSNHLVWSKLRASILNTWISLKQADKKIRE 422
+ AA I G+ + K++ + + +++ +
Sbjct: 133 AGILAASILGIKYPEIARKVKEYKERMKREVLEKAQRLEQ 172
>4AY3-A nrPDB
Length = 181
Score = 186 bits (472), Expect = 1e-47, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 6/159 (3%)
Query: 262 SESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGI 321
S + V V+MGSTSD + IP E +V SAH+ PD G+
Sbjct: 19 SHMKSLVGVIMGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGL 78
Query: 322 PTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDW-GVQDVWSSLRLPSGLGCSTVLSP 380
V +A AG + L +++ T PVI P + G+ + S +++P G+ +TV
Sbjct: 79 -KVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIG 137
Query: 381 E----GSAQFAAQIFGLSNHLVWSKLRASILNTWISLKQ 415
+ + AAQI G + + L +++
Sbjct: 138 KAGSTNAGLLAAQILGSFHDDIHDALELRREAIEKDVRE 176
>3OPQ-A nrPDB
Length = 163
Score = 184 bits (467), Expect = 6e-47, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 264 SQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPT 323
+V V+MGS SD ++ N GI E V SAH+ PD+ + G+
Sbjct: 1 MSVQVGVIMGSKSDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERGL-K 59
Query: 324 VFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQD-VWSSLRLPSGLGCSTVLSPEG 382
V +A AG + L +++ T PV+ P + QD + S +++P+G+ +T
Sbjct: 60 VIIAGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVAT------ 113
Query: 383 SAQFAAQIFGLSNHLVWSKLRASILNTWISLKQADKKIR 421
FA + G N +++ + + +T I++ +A + R
Sbjct: 114 ---FAIGMAGAKNAALFAA--SILQHTDINIAKALAEFR 147
>3LP6-A nrPDB
Length = 174
Score = 175 bits (444), Expect = 3e-44, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 4/160 (2%)
Query: 265 QCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTV 324
+ RV V+MGS SD A F IP E+RV SAH+ P+ G+ V
Sbjct: 7 RPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGL-EV 65
Query: 325 FVAVAGRSNGLGPVMSGNTAYPVISCPPL-TPDWGVQDVWSSLRLPSGLGCSTV--LSPE 381
+A AG + L +++ T PVI P G+ + S +++P+G+ +TV
Sbjct: 66 IIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAG 125
Query: 382 GSAQFAAQIFGLSNHLVWSKLRASILNTWISLKQADKKIR 421
+ A ++ G +N + +++ A + D +++
Sbjct: 126 NAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQ 165
>6O55-A nrPDB
Length = 174
Score = 174 bits (441), Expect = 6e-44, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Query: 267 RVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFV 326
+ ++MGS SD I E + SAH+ PD+ R + E G+ V +
Sbjct: 13 LIGLIMGSQSDWQTLIHAAHTLDALNIGYEAEIVSAHRTPDKLFRYAEQAEARGL-EVII 71
Query: 327 AVAGRSNGLGPVMSGNTAYPVISCPPLTPDW-GVQDVWSSLRLPSGLGCSTVLSPE---- 381
A AG + L +++ T+ PV+ P ++ GV + S +++P+G+ T+ +
Sbjct: 72 AGAGGAAHLPGMVAAKTSLPVLGVPVMSQTLNGVDSLLSIVQMPAGIPVGTLSIGKAGAI 131
Query: 382 GSAQFAAQIFGLSNHLVWSKLRASILNTWISL 413
SA FAA I + + L+ +
Sbjct: 132 NSALFAAAILANKYPDIRAALKHYREQQTQKV 163
>3KUU-A nrPDB
Length = 174
Score = 162 bits (411), Expect = 2e-40, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Query: 267 RVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFV 326
++ ++MGS SD + +P + V SAH+ PD + E +G+ V +
Sbjct: 14 KIAIVMGSKSDWATMQFAADVLTTLNVPFHVEVVSAHRTPDRLFSFAEQAEANGL-HVII 72
Query: 327 AVAGRSNGLGPVMSGNTAYPVISCPPLTPDW-GVQDVWSSLRLPSGLGCSTV 377
A G + L +++ T PV+ P + GV ++S +++P G+ T+
Sbjct: 73 AGNGGAAHLPGMLAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTL 124
>1QCZ-A nrPDB
Length = 169
Score = 162 bits (410), Expect = 2e-40, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Query: 266 CRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVF 325
RV ++MGS SD + + +P + V SAH+ PD+ E +G V
Sbjct: 8 ARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGY-QVI 66
Query: 326 VAVAGRSNGLGPVMSGNTAYPVISCPPLTPDW-GVQDVWSSLRLPSGLGCSTV 377
+A AG + L +++ T PV+ P + GV ++S +++P G+ T+
Sbjct: 67 IAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTL 119
>2YWX-A nrPDB
Length = 157
Score = 161 bits (406), Expect = 8e-40, Method: Composition-based stats.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 268 VVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVA 327
+ ++MGS SDL EK FG+ E+RV SAH+ P+ I + D VF+A
Sbjct: 2 ICIIMGSESDLKIAEKAVNILKEFGVEFEVRVASAHRTPELVEEIVKNSKAD----VFIA 57
Query: 328 VAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPSGLGCSTVLSPEG--SAQ 385
+AG + L V++ T PVI+ P G+ + SS+++P G+ +TV G +A
Sbjct: 58 IAGLAAHLPGVVASLTTKPVIAVPVDAKLDGLDALLSSVQMPPGIPVATVGIDRGENAAI 117
Query: 386 FAAQIFGLSNHLVWSKLRASILNTWISLKQADKKIRE 422
A +I L + + KL + +D+K++E
Sbjct: 118 LALEILALKDENIAKKLIEYREKMKKKVYASDEKVKE 154
>4GRD-A nrPDB
Length = 173
Score = 157 bits (396), Expect = 1e-38, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 261 KSESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDG 320
+ S V VLMGS+SD + FG+P E +V SAH+ PDE + G
Sbjct: 8 HTHSAPLVGVLMGSSSDWDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARERG 67
Query: 321 IPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDW-GVQDVWSSLRLPSGLGCSTVLS 379
+ + + L +++ T PV+ P + GV + S +++P G+ +T
Sbjct: 68 LRAIIAGAG-GAAHLPGMLAAKTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAI 126
Query: 380 PE 381
E
Sbjct: 127 GE 128
>5CLI-A nrPDB
Length = 183
Score = 152 bits (383), Expect = 4e-37, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 6/149 (4%)
Query: 261 KSESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDG 320
K+ S V ++MGS SD IP E + SAH+ PD G
Sbjct: 18 KAASAPVVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERG 77
Query: 321 IPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDW-GVQDVWSSLRLPSGLGCSTVL- 378
+ V +A AG + L + + T PV+ P + G+ + S +++P G+ T+
Sbjct: 78 LN-VIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAI 136
Query: 379 ---SPEGSAQFAAQIFGLSNHLVWSKLRA 404
+ +A AA I L N + ++L
Sbjct: 137 GASGAKNAALLAASILALYNPALAARLET 165
>3ORS-A nrPDB
Length = 163
Score = 140 bits (352), Expect = 1e-33, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 6/160 (3%)
Query: 267 RVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFV 326
+V V+MGS+SD ++ F IP E +V SAH+ P ++ +E GI +
Sbjct: 5 KVAVIMGSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARERGINIIIA 64
Query: 327 AVAGRSNGLGPVMSGNTAYPVISCPPLTPDW-GVQDVWSSLRLPSGLGC----STVLSPE 381
+ L +++ T PVI P T G+ + S +++P G+ +
Sbjct: 65 GAG-GAAHLPGMVASLTTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAK 123
Query: 382 GSAQFAAQIFGLSNHLVWSKLRASILNTWISLKQADKKIR 421
+ AA++ + N + KL + ++ +++
Sbjct: 124 NAGILAARMLSIQNPSLVEKLNQYESSLIQKVEDMQNELQ 163
>3TRH-A nrPDB
Length = 169
Score = 134 bits (336), Expect = 1e-31, Method: Composition-based stats.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Query: 268 VVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVA 327
V +LMGS SDL E + GIP E + SAH+ P ET+ + G VF+A
Sbjct: 9 VAILMGSDSDLSTMETAFTELKSLGIPFEAHILSAHRTPKETVEFVENADNRGC-AVFIA 67
Query: 328 VAGRSNGLGPVMSGNTAYPVISCPPLTPDWGV-QDVWSSLRLPSGLGCS-TVLSPEGS-- 383
AG + L ++ +T PVI P G + S++++P G+ + T + G+
Sbjct: 68 AAGLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKN 127
Query: 384 -AQFAAQIFGLSNHLVWSKLRASILNTWISLKQADKKIR 421
A AAQI L + + KL +LK+AD+ ++
Sbjct: 128 AAILAAQIIALQDKSIAQKLVQQRTAKRETLKKADENLQ 166
>4MCA-A nrPDB
Length = 367
Score = 33.9 bits (76), Expect = 0.14, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 27/95 (28%)
Query: 288 CGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPV 347
G+ + + E R+ E + G V G++ ++ PV
Sbjct: 52 LQQHGVKHHAALFNGECCHKEIDRLGRELKAHGCRGVIGVGGGKTLDTAKAIAHYQQLPV 111
Query: 348 ISCPPLTPDWGVQDVWSSLRLPSGLGCSTVLSPEG 382
+ P + S + G ++ P
Sbjct: 112 VLIPTIASTDAPTSALSVIYTEQGEFAEYLIYPRN 146
>4I61-A nrPDB
Length = 258
Score = 33.5 bits (75), Expect = 0.16, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 38/142 (26%), Gaps = 32/142 (22%)
Query: 270 VLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVA 329
+++G + I+ A N H+ + + F A A
Sbjct: 114 IIIGGDDPADARQAIRVALDNL-----------HRT----FGDVYNAKAGHLELQFTARA 158
Query: 330 GRSNGLG-PVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLP-------------SGLGCS 375
+ LG + G + CP + + S GC
Sbjct: 159 AGAAHLGLGAVEGKAFGLICGCPSGIGVVMGDKALKTAGVEPLNFTSPSHGTSFSNEGCL 218
Query: 376 TVLSPEGS---AQFAAQIFGLS 394
T+ G+ A A + GL
Sbjct: 219 TITGDSGAVRQAVMAGREVGLK 240
>1U0T-A nrPDB
Length = 307
Score = 32.8 bits (73), Expect = 0.31, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 18/107 (16%)
Query: 260 LKSESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSA--------HKGPDETLR 311
+ + +VV G +++K G+ I LRV SA H PD+
Sbjct: 1 MTAHRSVLLVVHTGRDEATETARRVEKVLGDNKI--ALRVLSAEAVDRGSLHLAPDDMRA 58
Query: 312 I--------KAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISC 350
+ ++ DG V V + ++ N + PV+
Sbjct: 59 MGVEIEVVDADQHAADGCELVLVLGGDGTFLRAAELARNASIPVLGV 105
>6DGE-A nrPDB
Length = 308
Score = 31.6 bits (70), Expect = 0.65, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 51/151 (33%), Gaps = 10/151 (6%)
Query: 174 EILEKSWLPQNCTLVDMKIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRD 233
++++++ +V+MK E + + + R + +++D
Sbjct: 126 DMMKEALEKLQLNIVEMKDENATLDGGDVLFTGREFFVGLSK--RTNQRGAEILADTFKD 183
Query: 234 --LKEVTPEGLQMVKKNFEWVAERVELLLKSESQCRVVVLMGSTSD-----LGHCEKIKK 286
+ V +K + + SES + + +M SD L + I
Sbjct: 184 YAVSTVPVADGLHLKSFCSMAGPNLIAIGSSESAQKALKIMQQMSDHRYDKLTVPDDIAA 243
Query: 287 ACGNFGIPCELRVTSAHKGPDETLRIKAEYE 317
C IP + V H+ P+E YE
Sbjct: 244 NCIYLNIPNKGHVL-LHRTPEEYPESAKVYE 273
>5FB3-A nrPDB
Length = 338
Score = 31.6 bits (70), Expect = 0.68, Method: Composition-based stats.
Identities = 24/158 (15%), Positives = 47/158 (29%), Gaps = 35/158 (22%)
Query: 267 RVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFV 326
RV+++ G +S + E++ + + S + E E G V
Sbjct: 32 RVLIITGKSSTRKYAERVAELLKQ-----NCEIISYDQV---------ELEKPGFDLVIG 77
Query: 327 AVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLP---------SGLGCSTV 377
GR + V S P ++ P G+ + S L S + +
Sbjct: 78 IGGGRPLDMAKVYSYIHKKPFVAIPTSASHDGIASPYVSFSLTQRFSKYGKISSSPVAII 137
Query: 378 ------------LSPEGSAQFAAQIFGLSNHLVWSKLR 403
L G +I + + + +L+
Sbjct: 138 ADTSIILSAPSRLLKAGIGDLLGKIIAVRDWQLAHRLK 175
>1TA9-A nrPDB
Length = 450
Score = 31.2 bits (69), Expect = 0.83, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 33/109 (30%), Gaps = 4/109 (3%)
Query: 265 QCRVVVLMGSTSDLGHCE-KIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPT 323
+ V++ + C KI + G+ V E +++ + D
Sbjct: 90 ATKSAVVLADQNVWNICANKIVDSLSQNGMTVTKLVFGGEASLVELDKLRKQCPDD--TQ 147
Query: 324 VFVAVAGRSNGLGP-VMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPSG 371
V + V G ++ + P I CP S + P G
Sbjct: 148 VIIGVGGGKTMDSAKYIAHSMNLPSIICPTTASSDAATSSLSVIYTPDG 196
>2P1R-A nrPDB
Length = 299
Score = 30.8 bits (68), Expect = 1.0, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 40/121 (33%), Gaps = 13/121 (10%)
Query: 270 VLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVA 329
+L G ++D + + GI +RVT R E G+ TV
Sbjct: 10 ILNGKSADNQPLREAITLLRDEGIQIHVRVTWEKGDAQ---RYVDEARRLGVETVIAGGG 66
Query: 330 GR-----SNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPSGLGCSTVLSPEGSA 384
S L + G P + PL D +S +P L + L+ G+A
Sbjct: 67 DGTINEVSTALIQIRDG--VAPALGLLPLGTA---NDFATSAGIPEALDKALKLAIAGNA 121
Query: 385 Q 385
Sbjct: 122 M 122
>4M60-A nrPDB
Length = 418
Score = 30.8 bits (68), Expect = 1.2, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 27/92 (29%), Gaps = 8/92 (8%)
Query: 322 PTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPSGLGCSTVLSPE 381
+FV AG + TA P+I+ P +G D+ L G+
Sbjct: 303 ADLFVTHAGAGGSQEGL---ATATPMIAVPQAVDQFGNADMLQGL----GVARKLATEEA 355
Query: 382 GSAQFAAQIFGL-SNHLVWSKLRASILNTWIS 412
+ L + V +LR
Sbjct: 356 TADLLRETALALVDDPEVARRLRRIQAEMAQE 387
>5XIX-A nrPDB
Length = 472
Score = 30.1 bits (66), Expect = 1.7, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 38/115 (33%), Gaps = 10/115 (8%)
Query: 110 KRNPGVKEGYKFYPPKVELF-FKDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHA 168
K+ PG G++ EL D +EE + + ++I + + A
Sbjct: 116 KQAPG---GHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGENMSKILKA 172
Query: 169 TQAIFEILEKSWLPQNC------TLVDMKIEFGVDVTTKEIVLADVIDNDSWRLW 217
+ + + TLV ++E G + + + S +L+
Sbjct: 173 RSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFGEEAFLTQSSQLY 227
>3O8O-A nrPDB
Length = 787
Score = 30.1 bits (66), Expect = 1.8, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 34/98 (34%), Gaps = 5/98 (5%)
Query: 254 ERVELLLKSESQCRVVVLMGSTSDL-GHCEKIKKACGNFGIPCELRVTSAHKGPDETLRI 312
+ ++ KS S+ VV +MG I IP R K DE +
Sbjct: 180 DYIDATAKSHSRAFVVEVMGRHCGWLALMAGIATGADYIFIP--ERAVPHGKWQDELKEV 237
Query: 313 KAEYEGDGIP--TVFVAVAGRSNGLGPVMSGNTAYPVI 348
+ G T+ VA + L PV + + +I
Sbjct: 238 CQRHRSKGRRNNTIIVAEGALDDQLNPVTANDVKDALI 275
>2CI6-A nrPDB
Length = 284
Score = 30.1 bits (66), Expect = 1.8, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 50/151 (33%), Gaps = 10/151 (6%)
Query: 174 EILEKSWLPQNCTLVDMKIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRD 233
++++++ +V+MK E + + + R + +++D
Sbjct: 102 DMMKEALEKLQLNIVEMKDENATLDGGDVLFTGREFFVGLSK--RTNQRGAEILADTFKD 159
Query: 234 --LKEVTPEGLQMVKKNFEWVAERVELLLKSESQCRVVVLMGSTSD-----LGHCEKIKK 286
+ V +K + + SES + + +M SD L +
Sbjct: 160 YAVSTVPVVDALHLKSFCSMAGPNLIAIGSSESAQKALKIMQQMSDHRYDKLTVPDDTAA 219
Query: 287 ACGNFGIPCELRVTSAHKGPDETLRIKAEYE 317
C IP + V H+ P+E YE
Sbjct: 220 NCIYLNIPSKGHVL-LHRTPEEYPESAKVYE 249
>5A7M-A nrPDB
Length = 766
Score = 30.1 bits (66), Expect = 1.8, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 6/91 (6%)
Query: 292 GIPCELRVTSAHKG----PDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPV 347
GI + A + P L + + G P V + + G + S +
Sbjct: 484 GIDNTIEQEGADRTDIAWPGNQLDLIKQLSEVGKPLVVLQMGGGQVDSSSLKSNKKVNSL 543
Query: 348 I--SCPPLTPDWGVQDVWSSLRLPSGLGCST 376
+ P + + D+ S R P+G +T
Sbjct: 544 VWGGYPGQSGGVALFDILSGKRAPAGRLVTT 574
>4RFL-A nrPDB
Length = 371
Score = 30.1 bits (66), Expect = 1.9, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 19/47 (40%)
Query: 324 VFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPS 370
V GRS G ++ P IS P + G+ S+R PS
Sbjct: 108 VIGIGGGRSIDTGKYLAYKLGIPFISVPTTASNDGIASPIVSIRQPS 154
>3OZ7-A nrPDB
Length = 417
Score = 30.1 bits (66), Expect = 2.0, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 7/117 (5%)
Query: 167 HATQAIFEILEKSWLPQNCTL---VDMKIEFGVDVTTKEIVLADVI-DNDSWRLWPSGDR 222
A I + + +N + VD KI D + D D+W +G +
Sbjct: 261 EAGSKIVGEIMEKAKAKNVQIFLPVDFKIADNFDNNANTKFVTDEEGIPDNWMGLDAGPK 320
Query: 223 SQQKDKQSYRDLKEVTPEGLQMVKKNFEWVA---ERVELLLKSESQCRVVVLMGSTS 276
S + K K V G Q V + + E + L+++ + + ++ G +
Sbjct: 321 SIENYKDVILTSKTVIWNGPQGVFEMPNFAKGSIECLNLVVEVTKKGAITIVGGGDT 377
>4RGQ-A nrPDB
Length = 368
Score = 30.1 bits (66), Expect = 2.0, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 19/47 (40%)
Query: 324 VFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPS 370
V GRS G ++ P IS P + G+ S+R PS
Sbjct: 105 VIGIGGGRSIDTGKYLAYKLGIPFISVPTTASNDGIASPIVSIRQPS 151
>1JNP-A nrPDB
Length = 116
Score = 29.7 bits (65), Expect = 2.7, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Query: 193 EFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMVKKNFEWV 252
+F V + +++ L + + + Q K YR + + L +K F V
Sbjct: 44 KFQVILRQEDVTLGEAMSPSQLVPYELPLMWQLYPKDRYRSADSMYWQILYHIK--FRDV 101
Query: 253 AERVELLLKSES 264
+ + L+ SES
Sbjct: 102 EDMLLELIDSES 113
>1U6Z-A nrPDB
Length = 513
Score = 29.3 bits (64), Expect = 3.1, Method: Composition-based stats.
Identities = 12/80 (15%), Positives = 28/80 (35%), Gaps = 7/80 (8%)
Query: 293 IPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPP 352
IP + + S ++ + + + + + G S L + G P++
Sbjct: 109 IPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTEL---VIGENFEPIL---V 162
Query: 353 LTPDWGVQDVWSSLRLPSGL 372
+ G ++ L P G+
Sbjct: 163 ESRRMGCVS-FAQLYFPGGV 181
>1JKX-A nrPDB
Length = 212
Score = 29.3 bits (64), Expect = 3.4, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 43 NAARKNHLEG--KAAISNKITSCIFQLLQEAGIKTA------FTRKCGETAFIAPQCEMI 94
+A + N ++G +A SNK + + ++AGI T F + + + +M
Sbjct: 19 DACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMY 78
Query: 95 PIEWVC 100
+ V
Sbjct: 79 APDVVV 84
>1A1S-A nrPDB
Length = 314
Score = 29.3 bits (64), Expect = 3.7, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 16/126 (12%)
Query: 116 KEGYKFYPPKVELFFKDDA--------NNDPQ--WSEEQLIAAKFCFAGLLIGQTEVDIM 165
EGY+ ++ ++ A +DP + +I + + E
Sbjct: 186 PEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDVWASMGQEAEAEERRK 245
Query: 166 SHATQAIFEILEKSWLPQNCTLVDMKIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQ 225
+ + L K P D + E V DVID+ + +W +
Sbjct: 246 IFRPFQVNKDLVKHAKP------DYMFMHCLPAHRGEEVTDDVIDSPNSVVWDQAENRLH 299
Query: 226 KDKQSY 231
K
Sbjct: 300 AQKAVL 305
>6MSD-Z nrPDB
Length = 324
Score = 28.5 bits (62), Expect = 6.4, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 30/100 (30%), Gaps = 15/100 (15%)
Query: 100 CRRIATGSFLKRNPGVKEGYKFYPPKVELFFKDDANNDPQWSEEQLIAAKFCFAGLLIGQ 159
+ GS+ K+ V + F +D +D W + +
Sbjct: 35 VVGVLLGSWQKKVLDVSNSFAVP-------FDEDDKDDSVWFLDHDYLENMYGMFKKVNA 87
Query: 160 TE--------VDIMSHATQAIFEILEKSWLPQNCTLVDMK 191
E + AI E++++ ++D+K
Sbjct: 88 RERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVK 127
>5VFQ-Z nrPDB
Length = 286
Score = 28.1 bits (61), Expect = 6.7, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 30/100 (30%), Gaps = 15/100 (15%)
Query: 100 CRRIATGSFLKRNPGVKEGYKFYPPKVELFFKDDANNDPQWSEEQLIAAKFCFAGLLIGQ 159
+ GS+ K+ V + F +D +D W + +
Sbjct: 31 VVGVLLGSWQKKVLDVSNSFAVP-------FDEDDKDDSVWFLDHDYLENMYGMFKKVNA 83
Query: 160 TE--------VDIMSHATQAIFEILEKSWLPQNCTLVDMK 191
E + AI E++++ ++D+K
Sbjct: 84 RERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVK 123
>3CVJ-A nrPDB
Length = 243
Score = 28.1 bits (61), Expect = 7.1, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 36/107 (33%), Gaps = 5/107 (4%)
Query: 285 KKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTA 344
K + +VTS HK + +G P V AG + SG T+
Sbjct: 136 AKVIAMTSMKHSQKVTSRHKSGKKLYEYADVVLDNGAP---VGDAGFQIANSEIYSGATS 192
Query: 345 YPVISCPPLTPDWGVQDVWSSLRLPSGLGCSTVLSPEGSAQFAAQIF 391
I C L V+ + ++ + +G+ + +IF
Sbjct: 193 -DSIGC-FLAQALIVETLHLLVQQGFEPPVFKSSNVDGADLYNDKIF 237
>4YPN-A nrPDB
Length = 293
Score = 28.1 bits (61), Expect = 7.4, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 25/77 (32%)
Query: 302 AHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQD 361
A + ++ + EY G +GL + + + P +++
Sbjct: 5 AQRVKEQMDTNQREYYLREQMKAIQKELGGEDGLSDLEALRKKIEEVGMPEAVKTKALKE 64
Query: 362 VWSSLRLPSGLGCSTVL 378
+ R+ G +TV
Sbjct: 65 LDRLERMQQGSPEATVA 81
>3A4L-A nrPDB
Length = 260
Score = 28.1 bits (61), Expect = 8.3, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 205 LADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMVKKNFEWVAERV 256
++D ID ++ ++ +S++ DK +++ E+ E L+ +KK E A+RV
Sbjct: 190 ISDKIDKETRKIVSEYIKSKKLDKDKIKEVVELRKEFLKKIKKMEEVDADRV 241
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.311 0.131 0.331
Lambda K H
0.267 0.0402 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,870,873
Number of Sequences: 36641
Number of extensions: 564303
Number of successful extensions: 1823
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 1645
Number of HSP's gapped (non-prelim): 94
length of query: 425
length of database: 10,336,785
effective HSP length: 100
effective length of query: 325
effective length of database: 6,672,685
effective search space: 2168622625
effective search space used: 2168622625
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 60 (27.7 bits)