BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P21784 (527 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6CIJ-D nrPDB 1088 0.0 5ZDZ-B nrPDB 804 0.0 4WWX-X nrPDB 731 0.0 6DBW-B nrPDB 568 e-162 2V83-A nrPDB 166 3e-41 1BJT-A nrPDB 33 0.36 3D0Q-A nrPDB 31 1.2 5GQ0-B nrPDB 31 1.3 5Z09-A nrPDB 29 4.2 4BXZ-X nrPDB 28 6.7 3I9V-1 nrPDB 28 7.7 >6CIJ-D nrPDB Length = 520 Score = 1088 bits (2814), Expect = 0.0, Method: Compositional matrix adjust. Identities = 519/520 (99%), Positives = 519/520 (99%) Query: 1 MSLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPA 60 MSLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPA Sbjct: 1 MSLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPA 60 Query: 61 IFSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKNNKKV 120 IFSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKNNKKV Sbjct: 61 IFSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKNNKKV 120 Query: 121 TFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCLP 180 TFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCLP Sbjct: 121 TFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCLP 180 Query: 181 HVFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVDL 240 HVFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVDL Sbjct: 181 HVFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVDL 240 Query: 241 PLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEIS 300 PLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEIS Sbjct: 241 PLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEIS 300 Query: 301 EMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRCSEEDLSEDQK 360 EMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRCSEEDLSEDQK Sbjct: 301 EMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRCSEEDLSEDQK 360 Query: 361 IVSNSQTSTEDPGDSTPFEDSEEFCFSAEATSFDGDDEFDTYNEDDEDDESVTGYWITCC 420 IVSNSQTSTEDPGDSTPFEDSEEFCFSAEATSFDGDDEFDTYNEDDEDDESVTGYWITCC Sbjct: 361 IVSNSQTSTEDPGDSTPFEDSEEFCFSAEATSFDGDDEFDTYNEDDEDDESVTGYWITCC 420 Query: 421 PTCDVDINTWVPFYSTELNKPAMIYCSHGDGHWVHAQCMDLEERTLIHLSEGSNKYYCNE 480 PTCDVDINTWVPFYSTELNKPAMIYCSHGDGHWVHAQCMDLEERTLIHLSEGSNKYYCNE Sbjct: 421 PTCDVDINTWVPFYSTELNKPAMIYCSHGDGHWVHAQCMDLEERTLIHLSEGSNKYYCNE 480 Query: 481 HVQIARALQTPKRNPPLQKPPMKSLHKKGSGKVLTPAKKS 520 HVQIARALQ PKRNPPLQKPPMKSLHKKGSGKVLTPAKKS Sbjct: 481 HVQIARALQAPKRNPPLQKPPMKSLHKKGSGKVLTPAKKS 520 >5ZDZ-B nrPDB Length = 389 Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/387 (99%), Positives = 387/387 (100%) Query: 1 MSLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPA 60 +SLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPA Sbjct: 3 VSLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPA 62 Query: 61 IFSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKNNKKV 120 IFSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKNNKKV Sbjct: 63 IFSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKNNKKV 122 Query: 121 TFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCLP 180 TFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCLP Sbjct: 123 TFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCLP 182 Query: 181 HVFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVDL 240 HVFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVDL Sbjct: 183 HVFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVDL 242 Query: 241 PLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEIS 300 PLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEIS Sbjct: 243 PLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEIS 302 Query: 301 EMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRCSEEDLSEDQK 360 EMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRCSEEDLSEDQK Sbjct: 303 EMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRCSEEDLSEDQK 362 Query: 361 IVSNSQTSTEDPGDSTPFEDSEEFCFS 387 IVSNSQTSTEDPGDSTPFEDSEEFCFS Sbjct: 363 IVSNSQTSTEDPGDSTPFEDSEEFCFS 389 >4WWX-X nrPDB Length = 349 Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/349 (100%), Positives = 349/349 (100%) Query: 2 SLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPAI 61 SLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPAI Sbjct: 1 SLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPAI 60 Query: 62 FSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKNNKKVT 121 FSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKNNKKVT Sbjct: 61 FSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKNNKKVT 120 Query: 122 FRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCLPH 181 FRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCLPH Sbjct: 121 FRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCLPH 180 Query: 182 VFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVDLP 241 VFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVDLP Sbjct: 181 VFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVDLP 240 Query: 242 LGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEISE 301 LGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEISE Sbjct: 241 LGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEISE 300 Query: 302 METPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRC 350 METPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRC Sbjct: 301 METPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRC 349 >6DBW-B nrPDB Length = 533 Score = 568 bits (1463), Expect = e-162, Method: Compositional matrix adjust. Identities = 279/533 (52%), Positives = 365/533 (68%), Gaps = 9/533 (1%) Query: 1 MSLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPA 60 MSLQ +T + +L+QPGFSL++ +G V+ FGQKGWPKRSCPTG+F IK+ LKL+ Sbjct: 4 MSLQPLTAVNCGSLVQPGFSLLDLEGDVYLFGQKGWPKRSCPTGIFGVRIKKGELKLRAI 63 Query: 61 IFSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKN-NKK 119 FS +S YLPPLR PA ++ D Y+IHGG+TPNNELS +Y++SV + N+K Sbjct: 64 SFSNNSSYLPPLRCPAIAHFEAQ-DGKPECYLIHGGRTPNNELSSSLYMLSVDSRGCNRK 122 Query: 120 VTFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCL 179 VT RC EK+LVGDVP RYGH++ V+ SRGK+ VLFGGRSYMP T+RTT+ WNSV DC Sbjct: 123 VTLRCEEKELVGDVPSARYGHTLSVINSRGKTACVLFGGRSYMPPTERTTQNWNSVVDCP 182 Query: 180 PHVFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVD 239 P V+LID EFGC T++ LPEL DG SFHV++AR D VY LGGH L+S+ RP+ L R+ V+ Sbjct: 183 PQVYLIDLEFGCCTAHTLPELTDGQSFHVALARQDCVYFLGGHILSSDCRPSRLIRLHVE 242 Query: 240 LPLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEI 299 L LG+P + CT+L G++++SAI + E++I GGYQ E QKRM C+ V L D + + Sbjct: 243 LLLGSPVLTCTILHEGLTITSAIASPIGYHEYIIFGGYQSETQKRMECTYVGLDDVGVHM 302 Query: 300 SEMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRCSEEDLSEDQ 359 E P WTS+I HS+ WFG ++G GT + IP + EA++FY + +E E Sbjct: 303 ESREPPQWTSEISHSRTWFGGSLGKGTALVAIPSEGNPTPPEAYHFYQVSFQKEQDGE-A 361 Query: 360 KIVSNSQTSTEDPGDSTPFEDSEEFCFSAE--ATSFDGDDEFDTYNEDDEDDESVTGYWI 417 SQ ST D DS P EDSEE F E + D E DTYNE+DE+DES TGYWI Sbjct: 362 TAQGGSQEST-DFEDSAPLEDSEELYFGREPHELEYSSDVEGDTYNEEDEEDESQTGYWI 420 Query: 418 TCCPTCDVDINTWVPFYSTELNKPAMIYCSHGD-GHWVHAQCMDLEERTLIHLSEGSNKY 476 CC +C VD N W P+YSTEL +PAMI+CS G+ GHWVHAQCM+L E L+ LS+ ++KY Sbjct: 421 KCCLSCQVDPNIWEPYYSTELTRPAMIFCSRGEGGHWVHAQCMELPESLLLQLSQDNSKY 480 Query: 477 YCNEHVQIARALQT-PKRNPPLQKPPMKSLHKKGSGKV-LTPAKKSFLRRLFD 527 +C +H + + T PK+ P+++ PMK H+K + +TPAKK+FLRRLFD Sbjct: 481 FCLDHGGLPKQEMTPPKQMLPVKRVPMKMTHRKAPVSLKMTPAKKTFLRRLFD 533 >2V83-A nrPDB Length = 82 Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 74/74 (100%), Positives = 74/74 (100%) Query: 414 GYWITCCPTCDVDINTWVPFYSTELNKPAMIYCSHGDGHWVHAQCMDLEERTLIHLSEGS 473 GYWITCCPTCDVDINTWVPFYSTELNKPAMIYCSHGDGHWVHAQCMDLEERTLIHLSEGS Sbjct: 9 GYWITCCPTCDVDINTWVPFYSTELNKPAMIYCSHGDGHWVHAQCMDLEERTLIHLSEGS 68 Query: 474 NKYYCNEHVQIARA 487 NKYYCNEHVQIARA Sbjct: 69 NKYYCNEHVQIARA 82 >1BJT-A nrPDB Length = 793 Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust. Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 12/53 (22%) Query: 284 RMVCSLVSLGDNTIEISEMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNK 336 RM + +GDN +EI+E+ WTS IK + LG+ G++K Sbjct: 477 RMYGRIEQIGDNVLEITELPARTWTSTIKE------------YLLLGLSGNDK 517 >3D0Q-A nrPDB Length = 398 Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust. Identities = 11/31 (35%), Positives = 19/31 (61%) Query: 144 VVYSRGKSMGVLFGGRSYMPSTQRTTEKWNS 174 VVY +G ++G+L R+ +P+ QR W + Sbjct: 134 VVYEQGATVGLLAADRAGVPAVQRNQSAWRT 164 >5GQ0-B nrPDB Length = 349 Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust. Identities = 12/35 (34%), Positives = 20/35 (57%) Query: 78 CSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSV 112 +Y + K+ ++HGGK P NE +D +Y +V Sbjct: 304 TAYTAATVDGKNGLLMHGGKLPTNERTDDLYFYAV 338 >5Z09-A nrPDB Length = 409 Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust. Identities = 12/38 (31%), Positives = 25/38 (65%) Query: 260 SAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTI 297 +AIL+ NDE +I+ G + ++ +C++++L +N I Sbjct: 82 AAILSAKFNDEALIINGDLFFSNEKEICNIITLKENAI 119 >4BXZ-X nrPDB Length = 594 Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 7/73 (9%) Query: 406 DEDDESVTGYWITCCPTCDVDINTWVPFYSTELNKPAMIYCSHGDGHWVHAQCMDLEERT 465 DE DE+ GY C + + + + E + M+ C D W H +CM + T Sbjct: 63 DEVDEADEGYVRCLCGANNEN------YDAAEYSHGDMVQCDGCDT-WQHIKCMTDGKDT 115 Query: 466 LIHLSEGSNKYYC 478 + L +KYYC Sbjct: 116 IDGLMSEDSKYYC 128 >3I9V-1 nrPDB Length = 438 Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust. Identities = 10/34 (29%), Positives = 18/34 (52%) Query: 467 IHLSEGSNKYYCNEHVQIARALQTPKRNPPLQKP 500 +H+ G+ Y C E + +L+ + NP L+ P Sbjct: 171 LHVHRGAGAYICGEETALMNSLEGLRANPRLKPP 204 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6CIJ-D nrPDB 1041 0.0 6DBW-B nrPDB 914 0.0 5ZDZ-B nrPDB 774 0.0 4WWX-X nrPDB 711 0.0 2V83-A nrPDB 163 2e-40 Sequences not found previously or not previously below threshold: 4BXZ-X nrPDB 37 0.016 5GQ0-B nrPDB 33 0.24 2PM7-A nrPDB 33 0.46 5GQT-A nrPDB 32 0.60 4Z3X-A nrPDB 32 0.78 3D0Q-A nrPDB 30 3.1 5YRZ-B nrPDB 28 9.9 CONVERGED! >6CIJ-D nrPDB Length = 520 Score = 1041 bits (2692), Expect = 0.0, Method: Composition-based stats. Identities = 519/520 (99%), Positives = 519/520 (99%) Query: 1 MSLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPA 60 MSLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPA Sbjct: 1 MSLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPA 60 Query: 61 IFSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKNNKKV 120 IFSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKNNKKV Sbjct: 61 IFSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKNNKKV 120 Query: 121 TFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCLP 180 TFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCLP Sbjct: 121 TFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCLP 180 Query: 181 HVFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVDL 240 HVFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVDL Sbjct: 181 HVFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVDL 240 Query: 241 PLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEIS 300 PLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEIS Sbjct: 241 PLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEIS 300 Query: 301 EMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRCSEEDLSEDQK 360 EMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRCSEEDLSEDQK Sbjct: 301 EMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRCSEEDLSEDQK 360 Query: 361 IVSNSQTSTEDPGDSTPFEDSEEFCFSAEATSFDGDDEFDTYNEDDEDDESVTGYWITCC 420 IVSNSQTSTEDPGDSTPFEDSEEFCFSAEATSFDGDDEFDTYNEDDEDDESVTGYWITCC Sbjct: 361 IVSNSQTSTEDPGDSTPFEDSEEFCFSAEATSFDGDDEFDTYNEDDEDDESVTGYWITCC 420 Query: 421 PTCDVDINTWVPFYSTELNKPAMIYCSHGDGHWVHAQCMDLEERTLIHLSEGSNKYYCNE 480 PTCDVDINTWVPFYSTELNKPAMIYCSHGDGHWVHAQCMDLEERTLIHLSEGSNKYYCNE Sbjct: 421 PTCDVDINTWVPFYSTELNKPAMIYCSHGDGHWVHAQCMDLEERTLIHLSEGSNKYYCNE 480 Query: 481 HVQIARALQTPKRNPPLQKPPMKSLHKKGSGKVLTPAKKS 520 HVQIARALQ PKRNPPLQKPPMKSLHKKGSGKVLTPAKKS Sbjct: 481 HVQIARALQAPKRNPPLQKPPMKSLHKKGSGKVLTPAKKS 520 >6DBW-B nrPDB Length = 533 Score = 914 bits (2361), Expect = 0.0, Method: Composition-based stats. Identities = 279/533 (52%), Positives = 365/533 (68%), Gaps = 9/533 (1%) Query: 1 MSLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPA 60 MSLQ +T + +L+QPGFSL++ +G V+ FGQKGWPKRSCPTG+F IK+ LKL+ Sbjct: 4 MSLQPLTAVNCGSLVQPGFSLLDLEGDVYLFGQKGWPKRSCPTGIFGVRIKKGELKLRAI 63 Query: 61 IFSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKN-NKK 119 FS +S YLPPLR PA ++ D Y+IHGG+TPNNELS +Y++SV + N+K Sbjct: 64 SFSNNSSYLPPLRCPAIAHFEAQ-DGKPECYLIHGGRTPNNELSSSLYMLSVDSRGCNRK 122 Query: 120 VTFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCL 179 VT RC EK+LVGDVP RYGH++ V+ SRGK+ VLFGGRSYMP T+RTT+ WNSV DC Sbjct: 123 VTLRCEEKELVGDVPSARYGHTLSVINSRGKTACVLFGGRSYMPPTERTTQNWNSVVDCP 182 Query: 180 PHVFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVD 239 P V+LID EFGC T++ LPEL DG SFHV++AR D VY LGGH L+S+ RP+ L R+ V+ Sbjct: 183 PQVYLIDLEFGCCTAHTLPELTDGQSFHVALARQDCVYFLGGHILSSDCRPSRLIRLHVE 242 Query: 240 LPLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEI 299 L LG+P + CT+L G++++SAI + E++I GGYQ E QKRM C+ V L D + + Sbjct: 243 LLLGSPVLTCTILHEGLTITSAIASPIGYHEYIIFGGYQSETQKRMECTYVGLDDVGVHM 302 Query: 300 SEMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRCSEEDLSEDQ 359 E P WTS+I HS+ WFG ++G GT + IP + EA++FY + +E E Sbjct: 303 ESREPPQWTSEISHSRTWFGGSLGKGTALVAIPSEGNPTPPEAYHFYQVSFQKEQDGE-A 361 Query: 360 KIVSNSQTSTEDPGDSTPFEDSEEFCFSAE--ATSFDGDDEFDTYNEDDEDDESVTGYWI 417 SQ ST D DS P EDSEE F E + D E DTYNE+DE+DES TGYWI Sbjct: 362 TAQGGSQEST-DFEDSAPLEDSEELYFGREPHELEYSSDVEGDTYNEEDEEDESQTGYWI 420 Query: 418 TCCPTCDVDINTWVPFYSTELNKPAMIYCSHGD-GHWVHAQCMDLEERTLIHLSEGSNKY 476 CC +C VD N W P+YSTEL +PAMI+CS G+ GHWVHAQCM+L E L+ LS+ ++KY Sbjct: 421 KCCLSCQVDPNIWEPYYSTELTRPAMIFCSRGEGGHWVHAQCMELPESLLLQLSQDNSKY 480 Query: 477 YCNEHVQIARALQT-PKRNPPLQKPPMKSLHKKGSGKV-LTPAKKSFLRRLFD 527 +C +H + + T PK+ P+++ PMK H+K + +TPAKK+FLRRLFD Sbjct: 481 FCLDHGGLPKQEMTPPKQMLPVKRVPMKMTHRKAPVSLKMTPAKKTFLRRLFD 533 >5ZDZ-B nrPDB Length = 389 Score = 774 bits (1998), Expect = 0.0, Method: Composition-based stats. Identities = 386/387 (99%), Positives = 387/387 (100%) Query: 1 MSLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPA 60 +SLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPA Sbjct: 3 VSLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPA 62 Query: 61 IFSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKNNKKV 120 IFSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKNNKKV Sbjct: 63 IFSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKNNKKV 122 Query: 121 TFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCLP 180 TFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCLP Sbjct: 123 TFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCLP 182 Query: 181 HVFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVDL 240 HVFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVDL Sbjct: 183 HVFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVDL 242 Query: 241 PLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEIS 300 PLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEIS Sbjct: 243 PLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEIS 302 Query: 301 EMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRCSEEDLSEDQK 360 EMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRCSEEDLSEDQK Sbjct: 303 EMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRCSEEDLSEDQK 362 Query: 361 IVSNSQTSTEDPGDSTPFEDSEEFCFS 387 IVSNSQTSTEDPGDSTPFEDSEEFCFS Sbjct: 363 IVSNSQTSTEDPGDSTPFEDSEEFCFS 389 >4WWX-X nrPDB Length = 349 Score = 711 bits (1835), Expect = 0.0, Method: Composition-based stats. Identities = 349/349 (100%), Positives = 349/349 (100%) Query: 2 SLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPAI 61 SLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPAI Sbjct: 1 SLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPAI 60 Query: 62 FSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKNNKKVT 121 FSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKNNKKVT Sbjct: 61 FSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKNNKKVT 120 Query: 122 FRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCLPH 181 FRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCLPH Sbjct: 121 FRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCLPH 180 Query: 182 VFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVDLP 241 VFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVDLP Sbjct: 181 VFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVDLP 240 Query: 242 LGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEISE 301 LGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEISE Sbjct: 241 LGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEISE 300 Query: 302 METPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRC 350 METPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRC Sbjct: 301 METPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRC 349 >2V83-A nrPDB Length = 82 Score = 163 bits (412), Expect = 2e-40, Method: Composition-based stats. Identities = 74/74 (100%), Positives = 74/74 (100%) Query: 414 GYWITCCPTCDVDINTWVPFYSTELNKPAMIYCSHGDGHWVHAQCMDLEERTLIHLSEGS 473 GYWITCCPTCDVDINTWVPFYSTELNKPAMIYCSHGDGHWVHAQCMDLEERTLIHLSEGS Sbjct: 9 GYWITCCPTCDVDINTWVPFYSTELNKPAMIYCSHGDGHWVHAQCMDLEERTLIHLSEGS 68 Query: 474 NKYYCNEHVQIARA 487 NKYYCNEHVQIARA Sbjct: 69 NKYYCNEHVQIARA 82 >4BXZ-X nrPDB Length = 594 Score = 37.3 bits (85), Expect = 0.016, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 51/129 (39%), Gaps = 8/129 (6%) Query: 351 SEEDLSEDQKIVSNSQTSTEDPGDSTPFEDSEEFCFSAEATSFDGDDEFDTYN-EDDEDD 409 S + +++ I Q TE P + + + + + DT N DE D Sbjct: 7 SRSNKGQNKYIEYLLQEETEAPKKKRTKKKVDSAIEKNKKSDSSQEPRKDTENVRTDEVD 66 Query: 410 ESVTGYWITCCPTCDVDINTWVPFYSTELNKPAMIYCSHGDGHWVHAQCMDLEERTLIHL 469 E+ GY + C C + + + E + M+ C G W H +CM + T+ L Sbjct: 67 EADEGY-VRCL--CGANN---ENYDAAEYSHGDMVQCD-GCDTWQHIKCMTDGKDTIDGL 119 Query: 470 SEGSNKYYC 478 +KYYC Sbjct: 120 MSEDSKYYC 128 >5GQ0-B nrPDB Length = 349 Score = 33.5 bits (75), Expect = 0.24, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Query: 77 TCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVAC 114 T ++D K+ ++HGGK P NE +D +Y +V Sbjct: 304 TAYTAATVDG-KNGLLMHGGKLPTNERTDDLYFYAVNS 340 >2PM7-A nrPDB Length = 399 Score = 32.7 bits (73), Expect = 0.46, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 16/122 (13%) Query: 300 SEMETPDWTSDIKHSKIW-FGSNM------GNGTIFLG--IPG-DNKQAMSEAFYFYTLR 349 S ++ P W + + W FG + G G I G ++ +SEA T Sbjct: 5 SHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKISGLESNTTLSEALK--TKD 62 Query: 350 CSEEDLSEDQKIVSNSQTSTEDPGDSTPFEDSEEFCFSAEATSFDGD--DEFDTYNEDDE 407 K++ + + + + +EEF EA +FD D D D N + E Sbjct: 63 FKPLINQRLVKVIDDVNEEDWNMLEKLSMDGTEEFL--KEALAFDNDESDAQDDANNEKE 120 Query: 408 DD 409 DD Sbjct: 121 DD 122 >5GQT-A nrPDB Length = 478 Score = 32.3 bits (72), Expect = 0.60, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Query: 77 TCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVAC 114 T S +ID K ++HGGK P N+ D ++ + Sbjct: 433 TASTTATIDGKK-GLVMHGGKAPTNDRFDDLFFYGIDS 469 >4Z3X-A nrPDB Length = 653 Score = 31.9 bits (71), Expect = 0.78, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 22/100 (22%) Query: 193 TSYILP-ELQDGLSFHVSIARNDTVYILGGHSLASNIR--------------PANLYRIR 237 T Y+L +L G V+ DT LGG L +N + P NL Sbjct: 6 TGYVLEVDLTKGSIERVATDPRDTELYLGG--LGTNAKILWDRVPPEVEPFSPENLLIFA 63 Query: 238 VDLPLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGY 277 L GTPA C ++ S + QT F ++GG+ Sbjct: 64 AGLLCGTPATGCN-----RTIVSTVSPQTKLMAFSMMGGF 98 >3D0Q-A nrPDB Length = 398 Score = 29.6 bits (65), Expect = 3.1, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 19/31 (61%) Query: 144 VVYSRGKSMGVLFGGRSYMPSTQRTTEKWNS 174 VVY +G ++G+L R+ +P+ QR W + Sbjct: 134 VVYEQGATVGLLAADRAGVPAVQRNQSAWRT 164 >5YRZ-B nrPDB Length = 89 Score = 28.1 bits (61), Expect = 9.9, Method: Composition-based stats. Identities = 12/20 (60%), Positives = 14/20 (70%) Query: 148 RGKSMGVLFGGRSYMPSTQR 167 RG M VL GG+S MP TQ+ Sbjct: 17 RGSHMMVLSGGKSAMPMTQK 36 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.137 0.420 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,618,528 Number of Sequences: 36641 Number of extensions: 983646 Number of successful extensions: 2298 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 2208 Number of HSP's gapped (non-prelim): 64 length of query: 527 length of database: 10,336,785 effective HSP length: 102 effective length of query: 425 effective length of database: 6,599,403 effective search space: 2804746275 effective search space used: 2804746275 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 61 (28.1 bits)