BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P20646 (381 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1RPA-A nrPDB 712 0.0 1ND5-A nrPDB 582 e-167 5CDH-A nrPDB 111 4e-25 4JOD-A nrPDB 98 7e-21 2WNI-A nrPDB 37 0.012 2W6E-A nrPDB 30 2.0 2XND-A nrPDB 30 2.2 6GFF-I nrPDB 29 2.6 1SI4-B nrPDB 28 4.5 5Y6P-dy nrPDB 28 5.0 2EL7-A nrPDB 28 5.4 1BVU-A nrPDB 28 6.3 1NT4-A nrPDB 28 6.8 >1RPA-A nrPDB Length = 342 Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/342 (99%), Positives = 341/342 (99%) Query: 32 KELKFVTLVFRHGDRGPIETFPNDPIKESSWPQGFGQLTKWGMGQHYELGSYIRRRYGRF 91 KELKFVTLVFRHGDRGPIETFPNDPIKESSWPQGFGQLTKWGMGQHYELGSYIRRRYGRF Sbjct: 1 KELKFVTLVFRHGDRGPIETFPNDPIKESSWPQGFGQLTKWGMGQHYELGSYIRRRYGRF 60 Query: 92 LNNSYKHDQVYIRSTDVDRTLMSAMTNLAALFPPEGISIWNPRLLWQPIPVHTVSLSEDR 151 LNNSYKHDQVYIRSTDVDRTLMSAMTNLAALFPPEG SIWNPRLLWQPIPVHTVSLSEDR Sbjct: 61 LNNSYKHDQVYIRSTDVDRTLMSAMTNLAALFPPEGNSIWNPRLLWQPIPVHTVSLSEDR 120 Query: 152 LLYLPFRDCPRFQELKSETLKSEEFLKRLQPYKSFIDTLPSLSGFEDQDLFEIWSRLYDP 211 LLYLPFRDCPRFQELKSETLKSEEFLKRLQPYKSFIDTLPSLSGFEDQDLFEIWSRLYDP Sbjct: 121 LLYLPFRDCPRFQELKSETLKSEEFLKRLQPYKSFIDTLPSLSGFEDQDLFEIWSRLYDP 180 Query: 212 LYCESVHNFTLPTWATEDAMTKLKELSELSLLSLYGIHKQKEKSRLQGGVLVNEILKNMK 271 LYCESVHNFTLPTWATEDAMTKLKELSELSLLSLYGIHKQKEKSRLQGGVLVNEILKNMK Sbjct: 181 LYCESVHNFTLPTWATEDAMTKLKELSELSLLSLYGIHKQKEKSRLQGGVLVNEILKNMK 240 Query: 272 LATQPQKARKLIMYSAHDTTVSGLQMALDVYNGLLPPYASCHIMELYQDNGGHFVEMYYR 331 LATQPQKARKLIMYSAHDTTVSGLQMALDVYNGLLPPYASCHIMELYQDNGGHFVEMYYR Sbjct: 241 LATQPQKARKLIMYSAHDTTVSGLQMALDVYNGLLPPYASCHIMELYQDNGGHFVEMYYR 300 Query: 332 NETQNEPYPLTLPGCTHSCPLEKFAELLDPVIPQDWATECMG 373 NETQNEPYPLTLPGCTHSCPLEKFAELLDPVIPQDWATECMG Sbjct: 301 NETQNEPYPLTLPGCTHSCPLEKFAELLDPVIPQDWATECMG 342 >1ND5-A nrPDB Length = 354 Score = 582 bits (1500), Expect = e-167, Method: Compositional matrix adjust. Identities = 288/349 (82%), Positives = 314/349 (89%) Query: 32 KELKFVTLVFRHGDRGPIETFPNDPIKESSWPQGFGQLTKWGMGQHYELGSYIRRRYGRF 91 KELKFVTLVFRHGDR PI+TFP DPIKESSWPQGFGQLT+ GM QHYELG YIR+RY +F Sbjct: 1 KELKFVTLVFRHGDRSPIDTFPTDPIKESSWPQGFGQLTQLGMEQHYELGEYIRKRYRKF 60 Query: 92 LNNSYKHDQVYIRSTDVDRTLMSAMTNLAALFPPEGISIWNPRLLWQPIPVHTVSLSEDR 151 LN SYKH+QVYIRSTDVDRTLMSAMTNLAALFPPEG+SIWNP LLWQPIPVHTV LSED+ Sbjct: 61 LNESYKHEQVYIRSTDVDRTLMSAMTNLAALFPPEGVSIWNPILLWQPIPVHTVPLSEDQ 120 Query: 152 LLYLPFRDCPRFQELKSETLKSEEFLKRLQPYKSFIDTLPSLSGFEDQDLFEIWSRLYDP 211 LLYLPFR+CPRFQEL+SETLKSEEF KRL PYK FI TL LSG QDLF IWS++YDP Sbjct: 121 LLYLPFRNCPRFQELESETLKSEEFQKRLHPYKDFIATLGKLSGLHGQDLFGIWSKVYDP 180 Query: 212 LYCESVHNFTLPTWATEDAMTKLKELSELSLLSLYGIHKQKEKSRLQGGVLVNEILKNMK 271 LYCESVHNFTLP+WATED MTKL+ELSELSLLSLYGIHKQKEKSRLQGGVLVNEIL +MK Sbjct: 181 LYCESVHNFTLPSWATEDTMTKLRELSELSLLSLYGIHKQKEKSRLQGGVLVNEILNHMK 240 Query: 272 LATQPQKARKLIMYSAHDTTVSGLQMALDVYNGLLPPYASCHIMELYQDNGGHFVEMYYR 331 ATQ +KLIMYSAHDTTVSGLQMALDVYNGLLPPYASCH+ ELY + G +FVEMYYR Sbjct: 241 RATQIPSYKKLIMYSAHDTTVSGLQMALDVYNGLLPPYASCHLTELYFEKGEYFVEMYYR 300 Query: 332 NETQNEPYPLTLPGCTHSCPLEKFAELLDPVIPQDWATECMGTSNHQAS 380 NETQ+EPYPL LPGC+ SCPLE+FAEL+ PVIPQDW+TECM T++HQ + Sbjct: 301 NETQHEPYPLMLPGCSPSCPLERFAELVGPVIPQDWSTECMTTNSHQGT 349 >5CDH-A nrPDB Length = 336 Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 90/335 (26%), Positives = 146/335 (43%), Gaps = 21/335 (6%) Query: 34 LKFVTLVFRHGDRGPIETFPNDPIKESSWPQGFGQLTKWGMGQHYELGSYIRRRYGR--- 90 + F + RHGDR PI P W +G GQLT GM Q Y++G R++Y Sbjct: 1 MVFAVDIIRHGDRTPIVALPT---VNYQWQEGLGQLTAEGMQQEYKMGVAFRKKYIEELH 57 Query: 91 FLNNSYKHDQVYIRSTDVDRTLMSAMTNLAALFPP---EGISIWNPRL--LWQPIPVHTV 145 L Y++ +Y+RSTD RTLMSA + L L+PP I L +QPIPV + Sbjct: 58 LLPEHYEYGTIYVRSTDYARTLMSAQSLLMGLYPPGTGPSIPAGTSALPHAFQPIPVFSA 117 Query: 146 SLSEDRLLYLPFRDCPRFQELKSETLKSEEFLKRLQPYKSFIDTLPSLSGFEDQDLFEIW 205 D ++ R + ++ + E+ ++ K L+G + D E Sbjct: 118 PSKYDEVIIQQVDRKERKKLMEQYVFSTREWQQKNNELKDKYPLWSRLTGI-NIDTLEDL 176 Query: 206 SRLYDPLYCESVHNFTLPTWATEDAMTKLKELSELSLLSLYGIHKQKEKSRLQGGVLVNE 265 + LY +HN +P + + + +E + ++ K ++ + + L+ Sbjct: 177 ETVGHTLYVHQIHNAPMPEGLASNDIETIINSAEWAFMAQ---EKPQQIANVYSSKLMTN 233 Query: 266 ILKNMKLATQPQKARKLIMYSAHDTTVSGLQMALDVYNGLLPPYASCHIMELYQDNGGHF 325 I + + + K ++ SAHDTT++ + L PPYAS LY DNG + Sbjct: 234 IADYLNSGSMKKSKLKYVLLSAHDTTIASVLSFLGAPLEKSPPYASNVNFSLY-DNGAN- 291 Query: 326 VEMYYRNETQNEPYPLTLPGCTHS-CPLEKFAELL 359 YY + P+ +P C S C L++ L+ Sbjct: 292 ---YYTVKITYNGNPVLIPACGGSVCELQQLVNLV 323 >4JOD-A nrPDB Length = 396 Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 109/378 (28%), Positives = 164/378 (43%), Gaps = 83/378 (21%) Query: 33 ELKFVTLVFRHGDRGPIETFP-------------------------------------ND 55 +LK V +VFRHG R P++ P + Sbjct: 17 KLKMVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTVTNLAGGPKPYSPYDS 76 Query: 56 PIKESSWPQGF--GQLTKWGMGQHYELGSYIRRRYGR---FLNNSYKHDQVYIRSTDVDR 110 E++ G GQLTK GM Q + LG +R+ Y FL+ ++ +V+IRST++ R Sbjct: 77 QYHETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSPTFNPQEVFIRSTNIFR 136 Query: 111 TLMSAMTNLAALFP--PEGISIWNPRLLWQPIPVHTVSLSEDRLLYLPFRDCPRFQELKS 168 L S LA LF EG PI +HT ++ +LY ++ C ++ Sbjct: 137 NLESTRCLLAGLFQCQKEG-----------PIIIHTDE-ADSEVLYPNYQSCWSLRQRTR 184 Query: 169 ETLKSEEFLKRLQPYKSF-IDTLPSLSGFEDQDLFEIWSRLYDPLYCESVHNFTLPTWAT 227 ++ LQP S + + G + D + + L D + E HN LP+ Sbjct: 185 GRRQT----ASLQPGISEDLKKVKDRMGIDSSDKVDFFI-LLDNVAAEQAHN--LPSCPM 237 Query: 228 EDAMTKLKELSELSLLSLYGIHKQKEKSRLQGGV------LVNEILKNMKLATQPQKARK 281 ++ E + SLY + K+ +S LQ V L + +LK M AT P K RK Sbjct: 238 LKRFARMIEQRAVDT-SLYILPKEDRES-LQMAVGPFLHILESNLLKAMDSATAPDKIRK 295 Query: 282 LIMYSAHDTTVSGLQMALDVYNGLLPPYASCHIMELYQ--DNGGHFVEMYYRNETQNEPY 339 L +Y+AHD T L M L +++ PP+A MELYQ ++ FV++YY + Q Sbjct: 296 LYLYAAHDVTFIPLLMTLGIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQ---- 351 Query: 340 PLTLP-GCTHS-CPLEKF 355 +P GC CPL+ F Sbjct: 352 ---VPRGCPDGLCPLDMF 366 >2WNI-A nrPDB Length = 418 Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust. Identities = 72/358 (20%), Positives = 137/358 (38%), Gaps = 85/358 (23%) Query: 44 GDRGPIETFPNDPIKESSWPQGFGQLTKWGM----------GQHYELGSYIRRRYGRFLN 93 G+R IE P E W G+LT G GQHY R+ G Sbjct: 33 GNREAIEAATGRPWTE--WTTHDGELTGHGYAAVVNKGREEGQHY-------RQLGLLQA 83 Query: 94 NSYKHDQVYIRSTDVDRTLMSAMTNLAALFPPEGISIWNPRLLWQPI------------P 141 + +Y+R++ + RT +A + FP G++I P+ P Sbjct: 84 GCPTAESIYVRASPLQRTRATAQALVDGAFPGCGVAIHYANGDADPLFQTDKFAATQTDP 143 Query: 142 VHTVSLSEDRLLYLPFRD---CPRFQELKSETLKSEEFLK------RLQPYKSFIDTLPS 192 ++ +++ L R P Q LK ++++ R++ KS T+ Sbjct: 144 ARQLAAVKEKAGDLAQRRQALAPTIQLLKQAVCQADKPCPIFDTPWRVEQSKSGKTTISG 203 Query: 193 LSGFEDQDLFEIWSRLYDPLYCESVHNFTLPTWATEDAMTKLKELSELSLL--------- 243 LS + + + + L N L ++ A K+ + S+++ L Sbjct: 204 LS---------VMANMVETLRLGWSENLPL----SQLAWGKIAQASQITALLPLLTENYD 250 Query: 244 ----SLYGIHKQKEKSRLQGGVLVNEILKNMKLATQPQKARKLIMYSAHDTTVSGLQMAL 299 LY K +G VL+N +L +K P + ++ AHDT ++ ++ + Sbjct: 251 LSNDVLYTAQK-------RGSVLLNAMLDGVKPEASPNV--RWLLLVAHDTNIAMVRTLM 301 Query: 300 DV-------YNGLLPPYASCHIMELYQD--NGGHFVEMYYRNETQNEPYPLTLPGCTH 348 + G +PP +S ++E ++D +G ++ +Y++ + ++ L P H Sbjct: 302 NFSWQLPGYSRGNIPPGSSL-VLERWRDAKSGERYLRVYFQAQGLDDLRRLQTPDAQH 358 >2W6E-A nrPDB Length = 553 Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust. Identities = 10/24 (41%), Positives = 16/24 (66%) Query: 306 LPPYASCHIMELYQDNGGHFVEMY 329 L PY+ C + E ++DNG H + +Y Sbjct: 288 LAPYSGCSMGEYFRDNGKHALIIY 311 >2XND-A nrPDB Length = 492 Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust. Identities = 10/24 (41%), Positives = 16/24 (66%) Query: 306 LPPYASCHIMELYQDNGGHFVEMY 329 L PY+ C + E ++DNG H + +Y Sbjct: 227 LAPYSGCSMGEYFRDNGKHALIIY 250 >6GFF-I nrPDB Length = 618 Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust. Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 16/97 (16%) Query: 134 RLLWQPIPVHTVSLSEDRLLYL---PFRDCPRFQELK--SETL-----KSEEFLKRLQPY 183 RLL + +HT+SL+E+ L L FRD P ++L S L + E L RL Sbjct: 124 RLLGEAPSLHTLSLAENSLTRLTRHTFRDMPALEQLDLHSNVLMDIEDGAFEGLPRLTHL 183 Query: 184 KSFIDTLPSLSGFEDQDLFEIWSRLYDPLYCESVHNF 220 ++L +S F Q L R+ D L C S+ F Sbjct: 184 NLSRNSLTCISDFSLQQL-----RVLD-LSCNSIEAF 214 >1SI4-B nrPDB Length = 146 Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 10/78 (12%) Query: 226 ATEDAMTKLKEL----SELSLLSLYGIHKQKEKSRLQGGVLVNEILKNMKLATQPQKARK 281 A D + L L S+LS L +H E RL G VLV + +N PQ Sbjct: 70 AFSDGLAHLDNLKGTFSQLSELHCDKLHVDPENFRLLGNVLVCVLARNFGKEFTPQ---- 125 Query: 282 LIMYSAHDTTVSGLQMAL 299 M +A+ V+G+ AL Sbjct: 126 --MQAAYQKVVAGVANAL 141 >5Y6P-dy nrPDB Length = 352 Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 7/48 (14%) Query: 173 SEEFLKRLQPYKSFIDTL-----PSLSGFEDQDL--FEIWSRLYDPLY 213 S+ +K Y +DTL P++SG ED+DL + +W +++ Y Sbjct: 40 SKAVIKMTGDYGITLDTLLYHPTPTISGVEDKDLICYSVWKQVFGNAY 87 >2EL7-A nrPDB Length = 337 Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 5/74 (6%) Query: 101 VYIRSTDVDRTLMSAMTNLAALFPPEGISIWNPRLLWQPIPVHTVSLSEDRLLYLPFRDC 160 Y ST RT +A+ N+AA PE ++++ + +P HT LS P D Sbjct: 52 AYDPSTLAQRTFEAALVNIAAGLDPEKVTLF----VQSHVPEHT-ELSWVFTTLTPLGDL 106 Query: 161 PRFQELKSETLKSE 174 R + K + K E Sbjct: 107 TRMTQFKDKASKQE 120 >1BVU-A nrPDB Length = 418 Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 213 YCESVHNFTLPTWATEDAMTKLKELSELSLLSLYGIHKQKEKSRLQGG--VLVNEILKNM 270 Y E V N T W E+ KL + + +Y HK+K + V V+ + + M Sbjct: 351 YFEWVQNITGDYWTVEETRAKLDKKMTKAFWDVYNTHKEKNINMRDAAYVVAVSRVYQAM 410 Query: 271 K 271 K Sbjct: 411 K 411 >1NT4-A nrPDB Length = 391 Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust. Identities = 78/389 (20%), Positives = 139/389 (35%), Gaps = 64/389 (16%) Query: 33 ELKFVTLVFRHGDRGPIETFPNDPIKESSWPQGF-------GQLTKWGMGQHYELGSYIR 85 +L+ V ++ R R P+ N + E S P + GQLT G +G Y+R Sbjct: 8 QLQQVLMMSRANLRAPLAN--NGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMR 65 Query: 86 RRYGRFLNNSYKHDQ------VYIRSTDVDRTLMSAMTNLAALFPPEGISIWNPRLLWQP 139 K + VY + + RT+ +A + FP I + + + Sbjct: 66 EWLAE--QGMVKSGECPPPYTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTM 123 Query: 140 IPVHTVSLSEDRLLYLPFRDCPRFQEL-KSETLKSEEFLKRLQPYK-----------SFI 187 P +++D + +EL K + S + L+++ YK S + Sbjct: 124 DPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYQLLEKIVNYKDSPACKEKQQCSLV 183 Query: 188 DTLPSLSGFEDQDL-----FEIWSRLYDPLYCESVHNFTLP--TWATEDAMTKLKELSEL 240 D + S Q+ ++ + L D + F + W + + K LS+L Sbjct: 184 DGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKL 243 Query: 241 SLLSLYGIHKQKEKSRLQGGVLVNEILKNMKLATQPQKARKLIMYSAHDTTVSGLQMALD 300 + E +R LV+ I K L T A K+ + HD+ ++ L ALD Sbjct: 244 KNGYQDSLFTSPEVARNVAKPLVSYIDK--ALVTDRTSAPKITVLVGHDSNIASLLTALD 301 Query: 301 VYNGLL------PPYASCHIMELYQDNGGHF----VEMYYRNETQ------------NEP 338 L P + + + D+ + +E Y++ Q + Sbjct: 302 FKPYQLHDQNERTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQR 361 Query: 339 YPLTLPGCTHS----CPLEKFAELLDPVI 363 L L GC CP++KF +L+ + Sbjct: 362 VTLELSGCPIDADGFCPMDKFDSVLNEAV 390 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1RPA-A nrPDB 590 e-169 1ND5-A nrPDB 566 e-162 5CDH-A nrPDB 416 e-117 4JOD-A nrPDB 330 5e-91 Sequences not found previously or not previously below threshold: 1NT4-A nrPDB 52 4e-07 2WNI-A nrPDB 52 5e-07 1DKL-A nrPDB 46 4e-05 1QFX-A nrPDB 42 5e-04 1SK9-A nrPDB 40 0.002 3K4P-A nrPDB 36 0.024 5LS6-A nrPDB 35 0.052 6DDT-A nrPDB 31 0.70 5HVM-A nrPDB 31 0.75 2XND-A nrPDB 31 1.3 2W6E-A nrPDB 31 1.3 1PV1-A nrPDB 30 2.3 5K4B-A nrPDB 29 2.9 5LQZ-A nrPDB 29 3.8 6MJP-C nrPDB 29 4.2 4NRS-A nrPDB 29 4.4 >1RPA-A nrPDB Length = 342 Score = 590 bits (1521), Expect = e-169, Method: Composition-based stats. Identities = 341/342 (99%), Positives = 341/342 (99%) Query: 32 KELKFVTLVFRHGDRGPIETFPNDPIKESSWPQGFGQLTKWGMGQHYELGSYIRRRYGRF 91 KELKFVTLVFRHGDRGPIETFPNDPIKESSWPQGFGQLTKWGMGQHYELGSYIRRRYGRF Sbjct: 1 KELKFVTLVFRHGDRGPIETFPNDPIKESSWPQGFGQLTKWGMGQHYELGSYIRRRYGRF 60 Query: 92 LNNSYKHDQVYIRSTDVDRTLMSAMTNLAALFPPEGISIWNPRLLWQPIPVHTVSLSEDR 151 LNNSYKHDQVYIRSTDVDRTLMSAMTNLAALFPPEG SIWNPRLLWQPIPVHTVSLSEDR Sbjct: 61 LNNSYKHDQVYIRSTDVDRTLMSAMTNLAALFPPEGNSIWNPRLLWQPIPVHTVSLSEDR 120 Query: 152 LLYLPFRDCPRFQELKSETLKSEEFLKRLQPYKSFIDTLPSLSGFEDQDLFEIWSRLYDP 211 LLYLPFRDCPRFQELKSETLKSEEFLKRLQPYKSFIDTLPSLSGFEDQDLFEIWSRLYDP Sbjct: 121 LLYLPFRDCPRFQELKSETLKSEEFLKRLQPYKSFIDTLPSLSGFEDQDLFEIWSRLYDP 180 Query: 212 LYCESVHNFTLPTWATEDAMTKLKELSELSLLSLYGIHKQKEKSRLQGGVLVNEILKNMK 271 LYCESVHNFTLPTWATEDAMTKLKELSELSLLSLYGIHKQKEKSRLQGGVLVNEILKNMK Sbjct: 181 LYCESVHNFTLPTWATEDAMTKLKELSELSLLSLYGIHKQKEKSRLQGGVLVNEILKNMK 240 Query: 272 LATQPQKARKLIMYSAHDTTVSGLQMALDVYNGLLPPYASCHIMELYQDNGGHFVEMYYR 331 LATQPQKARKLIMYSAHDTTVSGLQMALDVYNGLLPPYASCHIMELYQDNGGHFVEMYYR Sbjct: 241 LATQPQKARKLIMYSAHDTTVSGLQMALDVYNGLLPPYASCHIMELYQDNGGHFVEMYYR 300 Query: 332 NETQNEPYPLTLPGCTHSCPLEKFAELLDPVIPQDWATECMG 373 NETQNEPYPLTLPGCTHSCPLEKFAELLDPVIPQDWATECMG Sbjct: 301 NETQNEPYPLTLPGCTHSCPLEKFAELLDPVIPQDWATECMG 342 >1ND5-A nrPDB Length = 354 Score = 566 bits (1458), Expect = e-162, Method: Composition-based stats. Identities = 288/349 (82%), Positives = 314/349 (89%) Query: 32 KELKFVTLVFRHGDRGPIETFPNDPIKESSWPQGFGQLTKWGMGQHYELGSYIRRRYGRF 91 KELKFVTLVFRHGDR PI+TFP DPIKESSWPQGFGQLT+ GM QHYELG YIR+RY +F Sbjct: 1 KELKFVTLVFRHGDRSPIDTFPTDPIKESSWPQGFGQLTQLGMEQHYELGEYIRKRYRKF 60 Query: 92 LNNSYKHDQVYIRSTDVDRTLMSAMTNLAALFPPEGISIWNPRLLWQPIPVHTVSLSEDR 151 LN SYKH+QVYIRSTDVDRTLMSAMTNLAALFPPEG+SIWNP LLWQPIPVHTV LSED+ Sbjct: 61 LNESYKHEQVYIRSTDVDRTLMSAMTNLAALFPPEGVSIWNPILLWQPIPVHTVPLSEDQ 120 Query: 152 LLYLPFRDCPRFQELKSETLKSEEFLKRLQPYKSFIDTLPSLSGFEDQDLFEIWSRLYDP 211 LLYLPFR+CPRFQEL+SETLKSEEF KRL PYK FI TL LSG QDLF IWS++YDP Sbjct: 121 LLYLPFRNCPRFQELESETLKSEEFQKRLHPYKDFIATLGKLSGLHGQDLFGIWSKVYDP 180 Query: 212 LYCESVHNFTLPTWATEDAMTKLKELSELSLLSLYGIHKQKEKSRLQGGVLVNEILKNMK 271 LYCESVHNFTLP+WATED MTKL+ELSELSLLSLYGIHKQKEKSRLQGGVLVNEIL +MK Sbjct: 181 LYCESVHNFTLPSWATEDTMTKLRELSELSLLSLYGIHKQKEKSRLQGGVLVNEILNHMK 240 Query: 272 LATQPQKARKLIMYSAHDTTVSGLQMALDVYNGLLPPYASCHIMELYQDNGGHFVEMYYR 331 ATQ +KLIMYSAHDTTVSGLQMALDVYNGLLPPYASCH+ ELY + G +FVEMYYR Sbjct: 241 RATQIPSYKKLIMYSAHDTTVSGLQMALDVYNGLLPPYASCHLTELYFEKGEYFVEMYYR 300 Query: 332 NETQNEPYPLTLPGCTHSCPLEKFAELLDPVIPQDWATECMGTSNHQAS 380 NETQ+EPYPL LPGC+ SCPLE+FAEL+ PVIPQDW+TECM T++HQ + Sbjct: 301 NETQHEPYPLMLPGCSPSCPLERFAELVGPVIPQDWSTECMTTNSHQGT 349 >5CDH-A nrPDB Length = 336 Score = 416 bits (1069), Expect = e-117, Method: Composition-based stats. Identities = 90/335 (26%), Positives = 146/335 (43%), Gaps = 21/335 (6%) Query: 34 LKFVTLVFRHGDRGPIETFPNDPIKESSWPQGFGQLTKWGMGQHYELGSYIRRRYGR--- 90 + F + RHGDR PI P W +G GQLT GM Q Y++G R++Y Sbjct: 1 MVFAVDIIRHGDRTPIVALPT---VNYQWQEGLGQLTAEGMQQEYKMGVAFRKKYIEELH 57 Query: 91 FLNNSYKHDQVYIRSTDVDRTLMSAMTNLAALFPP---EGISIWNPRL--LWQPIPVHTV 145 L Y++ +Y+RSTD RTLMSA + L L+PP I L +QPIPV + Sbjct: 58 LLPEHYEYGTIYVRSTDYARTLMSAQSLLMGLYPPGTGPSIPAGTSALPHAFQPIPVFSA 117 Query: 146 SLSEDRLLYLPFRDCPRFQELKSETLKSEEFLKRLQPYKSFIDTLPSLSGFEDQDLFEIW 205 D ++ R + ++ + E+ ++ K L+G + D E Sbjct: 118 PSKYDEVIIQQVDRKERKKLMEQYVFSTREWQQKNNELKDKYPLWSRLTGI-NIDTLEDL 176 Query: 206 SRLYDPLYCESVHNFTLPTWATEDAMTKLKELSELSLLSLYGIHKQKEKSRLQGGVLVNE 265 + LY +HN +P + + + +E + ++ K ++ + + L+ Sbjct: 177 ETVGHTLYVHQIHNAPMPEGLASNDIETIINSAEWAFMAQ---EKPQQIANVYSSKLMTN 233 Query: 266 ILKNMKLATQPQKARKLIMYSAHDTTVSGLQMALDVYNGLLPPYASCHIMELYQDNGGHF 325 I + + + K ++ SAHDTT++ + L PPYAS LY DNG + Sbjct: 234 IADYLNSGSMKKSKLKYVLLSAHDTTIASVLSFLGAPLEKSPPYASNVNFSLY-DNGAN- 291 Query: 326 VEMYYRNETQNEPYPLTLPGCTHS-CPLEKFAELL 359 YY + P+ +P C S C L++ L+ Sbjct: 292 ---YYTVKITYNGNPVLIPACGGSVCELQQLVNLV 323 >4JOD-A nrPDB Length = 396 Score = 330 bits (847), Expect = 5e-91, Method: Composition-based stats. Identities = 112/399 (28%), Positives = 169/399 (42%), Gaps = 85/399 (21%) Query: 33 ELKFVTLVFRHGDRGPIETFP-------------------------------------ND 55 +LK V +VFRHG R P++ P + Sbjct: 17 KLKMVQVVFRHGARSPLKPLPLEEQVEWNPQLLEVPPQTQFDYTVTNLAGGPKPYSPYDS 76 Query: 56 PIKESSWPQGF--GQLTKWGMGQHYELGSYIRRRYGR---FLNNSYKHDQVYIRSTDVDR 110 E++ G GQLTK GM Q + LG +R+ Y FL+ ++ +V+IRST++ R Sbjct: 77 QYHETTLKGGMFAGQLTKVGMQQMFALGERLRKNYVEDIPFLSPTFNPQEVFIRSTNIFR 136 Query: 111 TLMSAMTNLAALFP--PEGISIWNPRLLWQPIPVHTVSLSEDRLLYLPFRDCPRFQELKS 168 L S LA LF EG PI +HT ++ +LY ++ C ++ Sbjct: 137 NLESTRCLLAGLFQCQKEG-----------PIIIHTDE-ADSEVLYPNYQSCWSLRQRTR 184 Query: 169 ETLKSEEFLKRLQPYKSF-IDTLPSLSGFEDQDLFEIWSRLYDPLYCESVHNFTLPTWAT 227 LQP S + + G + D + + L D + E HN LP+ Sbjct: 185 G----RRQTASLQPGISEDLKKVKDRMGIDSSDKVDFFI-LLDNVAAEQAHN--LPSCPM 237 Query: 228 EDAMTKLKELSELSLLSLYGIHKQKEKSRLQGGV------LVNEILKNMKLATQPQKARK 281 ++ E + SLY + K+ +S LQ V L + +LK M AT P K RK Sbjct: 238 LKRFARMIEQRAVDT-SLYILPKEDRES-LQMAVGPFLHILESNLLKAMDSATAPDKIRK 295 Query: 282 LIMYSAHDTTVSGLQMALDVYNGLLPPYASCHIMELYQ--DNGGHFVEMYYRNETQNEPY 339 L +Y+AHD T L M L +++ PP+A MELYQ ++ FV++YY + Q Sbjct: 296 LYLYAAHDVTFIPLLMTLGIFDHKWPPFAVDLTMELYQHLESKEWFVQLYYHGKEQ---- 351 Query: 340 PLTLP-GCTHS-CPLEKFAELLD--PVIPQDWATECMGT 374 +P GC CPL+ F + + P+ + C T Sbjct: 352 ---VPRGCPDGLCPLDMFLNAMSVYTLSPEKYHALCSQT 387 >1NT4-A nrPDB Length = 391 Score = 52.1 bits (123), Expect = 4e-07, Method: Composition-based stats. Identities = 72/394 (18%), Positives = 128/394 (32%), Gaps = 68/394 (17%) Query: 30 QAKELKFVTLVFRHGDRGPI-----ETFPNDPIKESSWPQGFGQLTKWGMGQHYELGSYI 84 + +L+ V ++ R R P+ + P K W GQLT G +G Y+ Sbjct: 5 EGYQLQQVLMMSRANLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYM 64 Query: 85 RR--------RYGRFLNNSYKHDQVYIRSTDVDRTLMSAMTNLAALFPPEGISI------ 130 R + G VY + + RT+ +A + FP I + Sbjct: 65 REWLAEQGMVKSGECPPPY----TVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKM 120 Query: 131 WNPRLLWQPIPVHTVSLSEDRLLYLPFRDCPRFQELKSETL------------KSEEFLK 178 + P+ + ++ + ++ + Q S L E+ Sbjct: 121 GTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYQLLEKIVNYKDSPACKEKQQC 180 Query: 179 RLQPYKS-FIDTLPSLSGFEDQDLFEIWSRLYDPLYCESVHNFTLPT--WATEDAMTKLK 235 L K+ F G + L D + F + W + + K Sbjct: 181 SLVDGKNTFSAKYQQEPGVSGPLKVG--NSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWK 238 Query: 236 ELSELSLLSLYGIHKQKEKSRLQGGVLVNEILKNMKLATQPQKARKLIMYSAHDTTVSGL 295 LS+L + E +R LV+ I K + T A K+ + HD+ ++ L Sbjct: 239 VLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKAL--VTDRTSAPKITVLVGHDSNIASL 296 Query: 296 QMALDVYNGLL------PPYASCHIMELYQDNGGHF----VEMYYRNETQ---------- 335 ALD L P + + + D+ + +E Y++ Q Sbjct: 297 LTALDFKPYQLHDQNERTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQ 356 Query: 336 --NEPYPLTLPGCT----HSCPLEKFAELLDPVI 363 + L L GC CP++KF +L+ + Sbjct: 357 APAQRVTLELSGCPIDADGFCPMDKFDSVLNEAV 390 >2WNI-A nrPDB Length = 418 Score = 51.7 bits (122), Expect = 5e-07, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 130/350 (37%), Gaps = 43/350 (12%) Query: 44 GDRGPIETFPNDPIKESSWPQGFGQLTKWGMGQHYELGSYIRRRYGRF-LNNSYKH--DQ 100 G+R IE P E W G+LT G G + Y + L + + Sbjct: 33 GNREAIEAATGRPWTE--WTTHDGELTGHGYAAVVNKGREEGQHYRQLGLLQAGCPTAES 90 Query: 101 VYIRSTDVDRTLMSAMTNLAALFPPEGISIWNPRLLWQPI-------PVHTVSLSEDRLL 153 +Y+R++ + RT +A + FP G++I P+ T + + Sbjct: 91 IYVRASPLQRTRATAQALVDGAFPGCGVAIHYANGDADPLFQTDKFAATQTDPARQLAAV 150 Query: 154 YLPFRDCPRFQELKSETLK--SEEFLKRLQPYKSFIDTLP---SLSGFEDQDLFEIWSRL 208 D + ++ + T++ + + +P F S SG + + + Sbjct: 151 KEKAGDLAQRRQALAPTIQLLKQAVCQADKPCPIFDTPWRVEQSKSGKTTISGLSVMANM 210 Query: 209 YDPLYCESVHNFTLPT--WATEDAMTKLKELSELSLLSLYGIHKQKEKSRLQGGVLVNEI 266 + L N L W +++ L L + + ++ +G VL+N + Sbjct: 211 VETLRLGWSENLPLSQLAWGKIAQASQITALLPLLTENYDLSNDVLYTAQKRGSVLLNAM 270 Query: 267 LKNMKLATQPQKARKLIMYSAHDTTVSGLQMAL-------DVYNGLLPPYASCHIMELYQ 319 L +K P + ++ AHDT ++ ++ + G +PP S ++E ++ Sbjct: 271 LDGVKPEASPN--VRWLLLVAHDTNIAMVRTLMNFSWQLPGYSRGNIPP-GSSLVLERWR 327 Query: 320 D--NGGHFVEMYYRNETQNEPYPLTLPGCTHSCPLEKFAELLDPVIPQDW 367 D +G ++ +Y++ + ++ L P H P++ Q+W Sbjct: 328 DAKSGERYLRVYFQAQGLDDLRRLQTPDAQH------------PMLRQEW 365 >1DKL-A nrPDB Length = 410 Score = 45.5 bits (106), Expect = 4e-05, Method: Composition-based stats. Identities = 74/379 (19%), Positives = 118/379 (31%), Gaps = 67/379 (17%) Query: 33 ELKFVTLVFRHGDRGPIETFP----NDPIKESSWPQGFGQLTKWGMGQHYELGSYIRRRY 88 +L+ V +V RHG R P + P +WP G LT G LG Y R+R Sbjct: 7 KLESVVIVSRHGVRAPTKATQLMQDVTPDAWPTWPVKLGWLTPRGGELIAYLGHYQRQRL 66 Query: 89 GR--FLNNSYKHD--QVYIRSTDVDRTLMSAMTNLAALFPPEGISIWNPRLLWQPIPVHT 144 L QV I + +RT + A L P I++ P P+ Sbjct: 67 VADGLLAKKGCPQSGQVAIIADVDERTRKTGEAFAAGLAPDCAITVHTQADTSSPDPLFN 126 Query: 145 VSLS-----------EDRLL------YLPF--RDCPRFQELKS-----------ETLKSE 174 L D +L F F+EL+ + K + Sbjct: 127 -PLKTGVCQLDNANVTDAILSRAGGSIADFTGHRQTAFRELERVLNFPQSNLCLKREKQD 185 Query: 175 EFLKRLQPYKSFIDTLPSLSGFEDQDLFEIWSRLYDPLYCESVHNFTLPTWATEDAMTKL 234 E Q S + + S L + + P W + Sbjct: 186 ESCSLTQALPSELKVSADNVSLTGA--VSLASMLTEIFLLQQAQGMPEPGWGRITDSHQW 243 Query: 235 KELSELSLLSLYGIHKQKEKSRLQGGVLVNEILKNMKLATQPQKARK----------LIM 284 L L Y + + E +R + +L +K A P +K ++ Sbjct: 244 NTLLSLHNAQFYLLQRTPEVARSRA----TPLLDLIKTALTPHPPQKQAYGVTLPTSVLF 299 Query: 285 YSAHDTTVSGLQMALDVYNGLLP------PYASCHIMELYQ---DNGGHF--VEMYYRNE 333 + HDT ++ L AL++ N LP P + E ++ DN ++ + Sbjct: 300 IAGHDTNLANLGGALEL-NWTLPGQPDNTPPGGELVFERWRRLSDNSQWIQVSLVFQTLQ 358 Query: 334 TQNEPYPLTLPGCTHSCPL 352 + PL+L L Sbjct: 359 QMRDKTPLSLNTPPGEVKL 377 >1QFX-A nrPDB Length = 460 Score = 41.7 bits (96), Expect = 5e-04, Method: Composition-based stats. Identities = 72/407 (17%), Positives = 123/407 (30%), Gaps = 81/407 (19%) Query: 27 DPGQAKELKFVTLVFRHGDRGPIETFPND---------PIKESSWPQGFGQLTKW----- 72 DP + E+ V +V RHG+R P + D I + + L W Sbjct: 47 DPPTSCEVDQVIMVKRHGERYPSPSAGKDIEEALAKVYSINTTEYKGDLAFLNDWTYYVP 106 Query: 73 ---------------GMGQHYELGSYIRRRYGRFLNNSYKHDQVYIRSTDVDRTLMSAMT 117 G+ Y G+ + RYG N V S+ R + +A Sbjct: 107 NECYYNAETTSGPYAGLLDAYNHGNDYKARYGHLWNGE---TVVPFFSSGYGRVIETARK 163 Query: 118 NLAALFPPEGISIWNPRLLWQPIPVHTVSLSEDRLLYLPFRDCPRFQELKSETLKSEEFL 177 F G + L + + L + T + +F Sbjct: 164 FGEGFF---GYNYSTNAALN---IISESEVMGADSLTPTCDTDNDQTTCDNLTYQLPQFK 217 Query: 178 KRLQPYKSFIDTLPSLSGFEDQDLFEIWSRLYDPLYCESVHNFTLPTWATEDAMTKLKEL 237 S D++ + + ++ W + Sbjct: 218 VAAARLNSQNPG----MNLTASDVYNLMV-----MASFELNARPFSNWINAFTQDEWVSF 268 Query: 238 SELSLLSLYGIHKQKEKSRLQ-GGVLVNEILKNMKLATQPQKARKLIMYSAHDTTVSGLQ 296 + L+ Y +K+ G V N L + P++A L AHDT ++ + Sbjct: 269 GYVEDLNYYYCAGPGDKNMAAVGAVYANASLTLLNQG--PKEAGSLFFNFAHDTNITPIL 326 Query: 297 MALDV--YNGLLP--------PYA----------------SCHIMELYQDNGGHFVEMYY 330 AL V N LP PY+ SC L + G +V + Sbjct: 327 AALGVLIPNEDLPLDRVAFGNPYSIGNIVPMGGHLTIERLSCQATALSDE--GTYVRLVL 384 Query: 331 RNETQNEPYPLTLPGCTHSCPLEKFAELLDPVIPQDWATECMGTSNH 377 P+ G +SCPL + +L+ +P D+ T C ++++ Sbjct: 385 N--EAVLPFNDCTSGPGYSCPLANYTSILNKNLP-DYTTTCNVSASY 428 >1SK9-A nrPDB Length = 439 Score = 39.8 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 62/321 (19%), Positives = 101/321 (31%), Gaps = 59/321 (18%) Query: 33 ELKFVTLVFRHGDRGP--------------IETFPND------PIKESSWPQGFGQLTKW 72 + V ++ RHG R P I+ D +K ++ G LT + Sbjct: 45 RITLVQVLSRHGARYPTSSKSKKYKKLVTAIQANATDFKGKFAFLKTYNYTLGADDLTPF 104 Query: 73 GMGQHYELGSYIRRRYGRFLNNSYKHDQVYIRSTDVDRTLMSAMTNLAALFPPEGISIWN 132 G Q G +RY + L S +IR++ DR + S + + + + Sbjct: 105 GEQQLVNSGIKFYQRY-KALARSVVP---FIRASGSDRVIASGEKFIEGFQQAK---LAD 157 Query: 133 PRLLWQPIPVHTVSLSEDRLLYLPFRD--CPRFQELKSETLKSEEFLKRLQPYKSFIDTL 190 P + P +V + E C +F+ + + F P Sbjct: 158 PGATNRAAPAISVIIPESETFNNTLDHGVCTKFEASQLGDEVAANFTALFAPDI-RARAE 216 Query: 191 PSLSGFEDQDLFEIWSRLYDPLYCESVHNFTLPTWATEDAMTKLKELSEL-------SLL 243 L G D E L D ++V + +L +E SL Sbjct: 217 KHLPGVTLTD--EDVVSLMDMCSFDTV--ARTSDASQLSPFCQLFTHNEWKKYNYLQSLG 272 Query: 244 SLYGIHKQKEKSRLQGGVLVNEILKNM-----------------KLATQPQKARKLIMYS 286 YG QG NE++ + AT P A + +S Sbjct: 273 KYYGYGAGNPLGPAQGIGFTNELIARLTRSPVQDHTSTNSTLVSNPATFPLNATMYVDFS 332 Query: 287 AHDTTVSGLQMALDVYNGLLP 307 HD ++ + AL +YNG P Sbjct: 333 -HDNSMVSIFFALGLYNGTEP 352 >3K4P-A nrPDB Length = 444 Score = 36.3 bits (82), Expect = 0.024, Method: Composition-based stats. Identities = 69/386 (17%), Positives = 111/386 (28%), Gaps = 79/386 (20%) Query: 33 ELKFVTLVFRHGDRGP-----------IETFPNDP---------IKESSWPQGFGQLTKW 72 + F ++ RHG R P IE + +K ++ G LT + Sbjct: 49 RVTFAQVLSRHGARYPTDSKGKKYSALIEEIQQNATTFDGKYAFLKTYNYSLGADDLTPF 108 Query: 73 GMGQHYELGSYIRRRYGRFLNNSYKHDQVYIRSTDVDRTLMSAMTNLAALFPPEGI--SI 130 G + G +RY L + +IRS+ R + S + F + Sbjct: 109 GEQELVNSGIKFYQRY-ESLTRNIVP---FIRSSGSSRVIASGKKFIEG-FQSTKLKDPR 163 Query: 131 WNPRLLWQPIPVHTVSLSEDRLLYLPFRDCPRFQELKSETLKSEEFLKRLQPYKSFIDTL 190 P I V S P C F++ + F P Sbjct: 164 AQPGQSSPKIDVVISEASSSNNTLDP-GTCTVFEDSELADTVEANFTATFVPSIRQ-RLE 221 Query: 191 PSLSGFEDQDL-FEIWSRL--YDPLYCESVHNFTLPTWATEDAMTKLKELSELSLLSLYG 247 LSG D + +D + +V P + L L Y Sbjct: 222 NDLSGVTLTDTEVTYLMDMCSFDTISTSTVDTKLSPFCDLF-THDEWINYDYLQSLKKYY 280 Query: 248 IH--------------KQKEKSRLQGGVLVNEILKNMKLATQPQKA-RKLIMYS--AHDT 290 H + +RL + ++ N L + P +Y+ +HD Sbjct: 281 GHGAGNPLGPTQGVGYANELIARLTHSPVHDDTSSNHTLDSSPATFPLNSTLYADFSHDN 340 Query: 291 TVSGLQMALDVYNGLLP---------------------PYASCHIMELYQDNGGHFVEMY 329 + + AL +YNG P P+AS +E+ Q E Sbjct: 341 GIISILFALGLYNGTKPLSTTTVENITQTDGFSSAWTVPFASRLYVEMMQCQAEQ--EPL 398 Query: 330 YRNETQNEPYPLTLPGCTHSCPLEKF 355 R + PL H CP++ Sbjct: 399 VRVLVNDRVVPL------HGCPVDAL 418 >5LS6-A nrPDB Length = 695 Score = 35.1 bits (79), Expect = 0.052, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 72/207 (34%), Gaps = 36/207 (17%) Query: 162 RFQELKSETLKSEEFLKRLQPYKSFIDTLPSLSGFEDQDLFEIWSRLYDPLYCESVHNFT 221 R + L+ + ++E+ +R + ++ SL G + + +F Sbjct: 56 RQKILERTEILNQEWKQRRIQPVHILTSVSSLRGTRECSVTSDL-------------DFP 102 Query: 222 LPTWA--TEDAMTKLKELSELSLLS----------LYGIHKQKEKSRLQGGVLVNEILKN 269 T +A+ + + S L L+ I ++ Q G + E++KN Sbjct: 103 TQVIPLKTLNAVASVPIMYSWSPLQQNFMVEDETVLHNIPYMGDEVLDQDGTFIEELIKN 162 Query: 270 MKLATQPQKARKLIMYSAHDTTVSGLQMALDVYNGLLPP--YASCHIME----LYQDNG- 322 + I +D L AL YN PP + S I E ++ D G Sbjct: 163 YDGKVHGDRECGFI----NDEIFVELVNALGQYNESRPPRKFPSDKIFEAISSMFPDKGT 218 Query: 323 GHFVEMYYRNETQNEPYPLTLPGCTHS 349 ++ Y+ TQ + P CT + Sbjct: 219 AEELKEKYKELTQQQLPGALPPECTPN 245 >6DDT-A nrPDB Length = 868 Score = 31.3 bits (69), Expect = 0.70, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 9/104 (8%) Query: 49 IETFPNDPIKESSWPQGFGQLTKWGMGQHYELGSYIRRRYGRFLNNSYKHDQVYIRSTDV 108 + D E+ WP+G G T + M + L ++ K +VY R+ + Sbjct: 267 LVKIRKDVAVETWWPRGHGNQTGYNMTILFALDGGLKIE---------KAAKVYFRTVQL 317 Query: 109 DRTLMSAMTNLAALFPPEGISIWNPRLLWQPIPVHTVSLSEDRL 152 + L+ F G+ I+ W P ++ DRL Sbjct: 318 IEEGIKGSPGLSFYFKINGLPIFLKGSNWIPADSFQDKVTSDRL 361 >5HVM-A nrPDB Length = 515 Score = 31.3 bits (69), Expect = 0.75, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 34/120 (28%), Gaps = 22/120 (18%) Query: 107 DVDRTLMSAMTNLAAL-FPPEGISIWNPRLLWQPIPVHTVSLSEDRLLYLPFRDCPRFQE 165 D R +SA + L L P GI + P+ Sbjct: 213 DYTRHFLSACSRLLGLATTPNGIEFQGKVIACGAFPIGIDPEKF---------------- 256 Query: 166 LKSETLKSEEFLKRLQPYKSFIDTLPSLSGFEDQDLFEIWSRLYDPLYCESVHNFTLPTW 225 E LK E+ KR+ + + + G D + + L+ V P W Sbjct: 257 --QEGLKKEKVQKRIAQLEQKFQGVKLMVGV---DRLDYIKGVPQKLHALEVFLSDHPEW 311 >2XND-A nrPDB Length = 492 Score = 30.5 bits (67), Expect = 1.3, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 20/111 (18%) Query: 224 TWATEDAMTKLKELSELSLLSLYGIHKQKEKSRLQ-----GGVLVNEILKNMKLATQPQK 278 T T A+ + + EK +L G + + + +K T Sbjct: 155 TGKTSIAIDTIINQKRFN-------DGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADA 207 Query: 279 ARKLIMYSAHDTTVSGLQMALDVYNGLLPPYASCHIMELYQDNGGHFVEMY 329 + I+ SA + + LQ L PY+ C + E ++DNG H + +Y Sbjct: 208 MKYTIVVSATASDAAPLQY--------LAPYSGCSMGEYFRDNGKHALIIY 250 >2W6E-A nrPDB Length = 553 Score = 30.5 bits (67), Expect = 1.3, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 20/111 (18%) Query: 224 TWATEDAMTKLKELSELSLLSLYGIHKQKEKSRLQ-----GGVLVNEILKNMKLATQPQK 278 T T A+ + + EK +L G + + + +K T Sbjct: 216 TGKTSIAIDTIINQKRFN-------DGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADA 268 Query: 279 ARKLIMYSAHDTTVSGLQMALDVYNGLLPPYASCHIMELYQDNGGHFVEMY 329 + I+ SA + + LQ L PY+ C + E ++DNG H + +Y Sbjct: 269 MKYTIVVSATASDAAPLQY--------LAPYSGCSMGEYFRDNGKHALIIY 311 >1PV1-A nrPDB Length = 299 Score = 29.8 bits (65), Expect = 2.3, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 5/71 (7%) Query: 30 QAKELKFVTLVFRHGDRGPIETFPNDPIKESSWPQGFG---QLTKWGMGQHYELGSYIRR 86 QA + F + RG + NDP + QG G T+ QHY++ YI + Sbjct: 74 QADKYGFAIVFPDTSPRG--DEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHK 131 Query: 87 RYGRFLNNSYK 97 + L++ + Sbjct: 132 ELPQTLDSHFN 142 >5K4B-A nrPDB Length = 368 Score = 29.4 bits (64), Expect = 2.9, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 35/111 (31%), Gaps = 14/111 (12%) Query: 159 DCPRFQELKSETLKSEEFLKRLQPYKSFIDTLPSLSGFEDQDLFEIWSRLYDPLYCESVH 218 + PR++ + SEE + +G L H Sbjct: 173 NEPRYKFDEPNPFISEEEEGEVASVAYRYRKWDLNNGI--------------TLIARCEH 218 Query: 219 NFTLPTWATEDAMTKLKELSELSLLSLYGIHKQKEKSRLQGGVLVNEILKN 269 + + E +K L+E G+ +++ +G VL NE+ N Sbjct: 219 DAVMQGPNNETQFLTIKALNEWDSKLANGVEWRRKLDTQRGAVLANELRNN 269 >5LQZ-A nrPDB Length = 510 Score = 29.0 bits (63), Expect = 3.8, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 14/108 (12%) Query: 224 TWATEDAMTKLKELSELSLLSLYGIHKQKEKSRLQGGVLV--NEILKNMKLATQPQKARK 281 T T A+ + + G + K+ + V + + + ++ Q + Sbjct: 175 TGKTAVALDTILNQKRWN----DGNDESKKLYCVYVAVGQKRSTVAQLVQTLEQNDAMKY 230 Query: 282 LIMYSAHDTTVSGLQMALDVYNGLLPPYASCHIMELYQDNGGHFVEMY 329 I+ +A + + LQ L P+ +C I E ++DNG H + +Y Sbjct: 231 SIVVAATASEAAPLQY--------LAPFTACAIAEWFRDNGKHALIVY 270 >6MJP-C nrPDB Length = 191 Score = 28.6 bits (62), Expect = 4.2, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 33/108 (30%), Gaps = 8/108 (7%) Query: 237 LSELSLLSLYGIHKQKEKSRLQGGVLVNEILKNMKLATQPQKARKLIMYSAHDTTVSGLQ 296 L E + + GI + + L VL +L P + S + Sbjct: 91 LQEWEITARRGILSKDQVLTLYDDVLAKNLL--------PDSGFDTLTTSEMSIQLKSRD 142 Query: 297 MALDVYNGLLPPYASCHIMELYQDNGGHFVEMYYRNETQNEPYPLTLP 344 D L P H + + H E+Y + + + E +P Sbjct: 143 FWADKPVELRGPQFETHGQAMKGNFADHSAELYNQVQGRYETLTPLVP 190 >4NRS-A nrPDB Length = 449 Score = 28.6 bits (62), Expect = 4.4, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 3/53 (5%) Query: 61 SWPQGFGQLTKWGMGQH---YELGSYIRRRYGRFLNNSYKHDQVYIRSTDVDR 110 W GFGQ W G Y +G + +F Y ++ ++ + + Sbjct: 154 QWSGGFGQYVAWITGNQTIPYPVGDVTYDEFTQFAARFYNDSEIAPKANKLFK 206 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.306 0.124 0.331 Lambda K H 0.267 0.0385 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,573,602 Number of Sequences: 36641 Number of extensions: 521829 Number of successful extensions: 1284 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 23 Number of HSP's that attempted gapping in prelim test: 1250 Number of HSP's gapped (non-prelim): 40 length of query: 381 length of database: 10,336,785 effective HSP length: 99 effective length of query: 282 effective length of database: 6,709,326 effective search space: 1892029932 effective search space used: 1892029932 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 60 (27.8 bits)