BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P20433
         (221 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

4BY1-D nrPDB                                                          444   e-125
1Y14-A nrPDB                                                          376   e-105
1PQV-D nrPDB                                                          350   2e-97
1WCM-D nrPDB                                                          333   2e-92
5XOG-D nrPDB                                                          144   4e-35
3H0G-D nrPDB                                                           73   1e-13
5IY7-D nrPDB                                                           69   2e-12
4DN6-A nrPDB                                                           28   2.3  
6DZ7-B nrPDB                                                           28   3.0  
2E87-A nrPDB                                                           28   4.4  
2GTT-A nrPDB                                                           27   6.6  
4C7O-A nrPDB                                                           27   7.3  
4XKB-A nrPDB                                                           27   7.6  
4GLW-A nrPDB                                                           27   9.1  

>4BY1-D nrPDB
          Length = 221

 Score =  444 bits (1141), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 221/221 (100%), Positives = 221/221 (100%)

Query: 1   MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK 60
           MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK
Sbjct: 1   MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK 60

Query: 61  EALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETRE 120
           EALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETRE
Sbjct: 61  EALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETRE 120

Query: 121 KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL 180
           KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL
Sbjct: 121 KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL 180

Query: 181 GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221
           GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY
Sbjct: 181 GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221


>1Y14-A nrPDB
          Length = 187

 Score =  376 bits (965), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/187 (100%), Positives = 187/187 (100%)

Query: 35  LKQINHQGEEEELIALNLSEARLVIKEALVERRRAFKRSQKKHKKKHLKHENANDETTAV 94
           LKQINHQGEEEELIALNLSEARLVIKEALVERRRAFKRSQKKHKKKHLKHENANDETTAV
Sbjct: 1   LKQINHQGEEEELIALNLSEARLVIKEALVERRRAFKRSQKKHKKKHLKHENANDETTAV 60

Query: 95  EDEDDDLDEDDVNADDDDFMHSETREKELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRF 154
           EDEDDDLDEDDVNADDDDFMHSETREKELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRF
Sbjct: 61  EDEDDDLDEDDVNADDDDFMHSETREKELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRF 120

Query: 155 RDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKEL 214
           RDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKEL
Sbjct: 121 RDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKEL 180

Query: 215 SNLETLY 221
           SNLETLY
Sbjct: 181 SNLETLY 187


>1PQV-D nrPDB
          Length = 221

 Score =  350 bits (899), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 192/221 (86%), Positives = 192/221 (86%)

Query: 1   MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK 60
           MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK
Sbjct: 1   MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK 60

Query: 61  EALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETRE 120
           EALVERRRAFKRSQKKHKKKHLKHE                             HSETRE
Sbjct: 61  EALVERRRAFKRSQKKHKKKHLKHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSETRE 120

Query: 121 KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL 180
           KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL
Sbjct: 121 KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL 180

Query: 181 GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221
           GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY
Sbjct: 181 GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221


>1WCM-D nrPDB
          Length = 177

 Score =  333 bits (855), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 177/218 (81%), Positives = 177/218 (81%), Gaps = 41/218 (18%)

Query: 4   STSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEAL 63
           STSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEAL
Sbjct: 1   STSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEAL 60

Query: 64  VERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETREKEL 123
           VERRRAFKRSQKK                                         TREKEL
Sbjct: 61  VERRRAFKRSQKK-----------------------------------------TREKEL 79

Query: 124 ESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSL 183
           ESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSL
Sbjct: 80  ESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSL 139

Query: 184 ACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221
           ACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY
Sbjct: 140 ACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 177


>5XOG-D nrPDB
          Length = 186

 Score =  144 bits (362), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/227 (43%), Positives = 128/227 (56%), Gaps = 48/227 (21%)

Query: 1   MNVSTSTFQTRRRRLKK-VEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVI 59
           MNVSTST   RRRR K+ V++EENA  L+LG EF LKQ +H G E +LIAL+LSE+RL+I
Sbjct: 1   MNVSTSTVGARRRRAKQQVDDEENATLLRLGPEFALKQYDHDGNEHDLIALSLSESRLLI 60

Query: 60  KEALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETR 119
           +EAL  R RA        +   +  E++N E                  DDD+       
Sbjct: 61  REALKARSRA--------RNGGVDIESSNGEI-----------------DDDE------- 88

Query: 120 EKELESIDVLLEQTTGG-NNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTG----LHP 174
                    L + T+G   N  +K T+ YL  F+RF+D+ET  AV QLL ++     LHP
Sbjct: 89  ---------LAKVTSGAVANGVVKKTLDYLNTFARFKDEETCTAVDQLLHNSSDCSVLHP 139

Query: 175 FEVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221
           FE+AQL SL C+  DEA TLIPSL  K  +  L+RIL EL+ LE  Y
Sbjct: 140 FEIAQLSSLGCEDVDEAITLIPSLAAK-KEVNLQRILDELNRLEDPY 185


>3H0G-D nrPDB
          Length = 135

 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 1/77 (1%)

Query: 141 LKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNN 200
           +K T+ Y   F+RF+  E   A  ++L +   H FE AQLG+L C+ A+EA+TLIPSL N
Sbjct: 55  MKKTVAYFNVFARFKTAEATYACERILGNR-FHKFERAQLGTLCCEDAEEARTLIPSLAN 113

Query: 201 KISDDELERILKELSNL 217
           KI D  L+ IL ELS L
Sbjct: 114 KIDDQNLQGILDELSTL 130



 Score = 28.5 bits (62), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 11/48 (22%)

Query: 21 EENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEALVERRR 68
          EE+AA L+LG EF         E E++  L +SEA+++I+  L +R R
Sbjct: 7  EEDAAQLKLGPEF---------ENEDM--LTVSEAKILIETVLAQRAR 43


>5IY7-D nrPDB
          Length = 142

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 47/68 (69%)

Query: 144 TMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNNKIS 203
           T+ Y   FSRF+++ET+ +V  LL    LH FE+A L +L  +TA+E+K LIPSL  +  
Sbjct: 64  TLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEGRFE 123

Query: 204 DDELERIL 211
           D+EL++IL
Sbjct: 124 DEELQQIL 131


>4DN6-A nrPDB
          Length = 146

 Score = 28.5 bits (62), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 141 LKNTMQYLTNFSRFRDQETVGAVIQLLKST-GLHPFEVAQLGSLACDTADEA 191
           L +  + + +  R+R   TVG   Q+++ T GL  F++  +  +A DTA+ A
Sbjct: 33  LAHLARLVGDAGRYRVTRTVGRAAQIVQRTDGLDAFDILMIDGVALDTAELA 84


>6DZ7-B nrPDB
          Length = 735

 Score = 28.1 bits (61), Expect = 3.0,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%)

Query: 66  RRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETREKELES 125
           ++R F+  ++  KK+H K E  N    A E +   L +D+   D+  F+     E ELE 
Sbjct: 452 KQRVFREYKEYTKKQHAKAEPGNG---AGEKKTVSLGDDE---DEARFLTRVRNEAELED 505

Query: 126 IDV 128
            DV
Sbjct: 506 YDV 508


>2E87-A nrPDB
          Length = 357

 Score = 27.7 bits (60), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 3/59 (5%)

Query: 156 DQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADE--AKTLIPSLNNKISDDELERILK 212
           D+E +  + + +K  GL+P +++ L     D   E   KTL P L  K++ +++ER L+
Sbjct: 294 DEENIKRLEKFVKEKGLNPIKISALKGTGIDLVKEEIIKTLRP-LAEKVAREKIERELR 351


>2GTT-A nrPDB
          Length = 450

 Score = 26.9 bits (58), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 102 DEDDVNADDDDFMHSETREKELESIDVLL 130
           D+  VN+DD+D+   ETR  E     +++
Sbjct: 383 DDGTVNSDDEDYFSGETRSPEAVYTRIMM 411


>4C7O-A nrPDB
          Length = 298

 Score = 26.9 bits (58), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 59/144 (40%), Gaps = 24/144 (16%)

Query: 12  RRRLKKVEEEENAATLQLGQEFQLKQINHQ-----GEEEELIALNLSEARLVIKEAL--- 63
           R + K V  E N  +L  GQEF +K + ++     GEE + + L      +V+   L   
Sbjct: 54  RVKEKAVGHEVNK-SLTPGQEF-VKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGA 111

Query: 64  -----VERRRAFKRSQKKHKKKHL-------KHENANDETTAVEDEDDDLDEDDVNADDD 111
                V +   F R  +KHKKK L       +        T  E    D    DV     
Sbjct: 112 GKTTSVGKLGKFLR--EKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPV 169

Query: 112 DFMHSETREKELESIDVLLEQTTG 135
           D +++  +E +L+  DVLL  T G
Sbjct: 170 DIVNAALKEAKLKFYDVLLVDTAG 193


>4XKB-A nrPDB
          Length = 233

 Score = 26.9 bits (58), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 30/103 (29%)

Query: 114 MHSETREKELESIDVLLEQTTGGNNKDL----------------KNTMQYLTNFSRFRDQ 157
           +H  + +K+L +I  L E   GG    L                 N  Q L N     +Q
Sbjct: 12  LHDASEKKQLTAIAALAEMGEGGQGILLDYLAKNVPLEKPVLAVGNVYQTLRNL----EQ 67

Query: 158 ETVGAVIQLLKSTGLHPFEVAQ----------LGSLACDTADE 190
           ET+   +Q    TG+ P + AQ          LGS   +TADE
Sbjct: 68  ETITTQLQRNYPTGIFPLQSAQGIDYLPLQEALGSQDFETADE 110


>4GLW-A nrPDB
          Length = 305

 Score = 26.6 bits (57), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 11/23 (47%), Positives = 15/23 (65%)

Query: 199 NNKISDDELERILKELSNLETLY 221
           N  +SD E +R+ +EL  LET Y
Sbjct: 24  NPSVSDSEYDRLYRELVELETAY 46


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

4BY1-D nrPDB                                                          288   9e-79
1PQV-D nrPDB                                                          253   4e-68
1Y14-A nrPDB                                                          243   6e-65
1WCM-D nrPDB                                                          228   1e-60
5XOG-D nrPDB                                                          216   7e-57
3H0G-D nrPDB                                                          112   1e-25
5IY7-D nrPDB                                                           96   1e-20

Sequences not found previously or not previously below threshold:

2PMZ-F nrPDB                                                           40   0.001
1LQA-A nrPDB                                                           32   0.25 
5VAT-A nrPDB                                                           28   2.5  
3O6X-A nrPDB                                                           28   3.2  
6ID1-U nrPDB                                                           26   9.4  

>4BY1-D nrPDB
          Length = 221

 Score =  288 bits (737), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 221/221 (100%), Positives = 221/221 (100%)

Query: 1   MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK 60
           MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK
Sbjct: 1   MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK 60

Query: 61  EALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETRE 120
           EALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETRE
Sbjct: 61  EALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETRE 120

Query: 121 KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL 180
           KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL
Sbjct: 121 KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL 180

Query: 181 GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221
           GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY
Sbjct: 181 GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221


>1PQV-D nrPDB
          Length = 221

 Score =  253 bits (646), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 192/221 (86%), Positives = 192/221 (86%)

Query: 1   MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK 60
           MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK
Sbjct: 1   MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK 60

Query: 61  EALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETRE 120
           EALVERRRAFKRSQKKHKKKHLKHE                             HSETRE
Sbjct: 61  EALVERRRAFKRSQKKHKKKHLKHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSETRE 120

Query: 121 KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL 180
           KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL
Sbjct: 121 KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL 180

Query: 181 GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221
           GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY
Sbjct: 181 GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221


>1Y14-A nrPDB
          Length = 187

 Score =  243 bits (619), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 187/187 (100%), Positives = 187/187 (100%)

Query: 35  LKQINHQGEEEELIALNLSEARLVIKEALVERRRAFKRSQKKHKKKHLKHENANDETTAV 94
           LKQINHQGEEEELIALNLSEARLVIKEALVERRRAFKRSQKKHKKKHLKHENANDETTAV
Sbjct: 1   LKQINHQGEEEELIALNLSEARLVIKEALVERRRAFKRSQKKHKKKHLKHENANDETTAV 60

Query: 95  EDEDDDLDEDDVNADDDDFMHSETREKELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRF 154
           EDEDDDLDEDDVNADDDDFMHSETREKELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRF
Sbjct: 61  EDEDDDLDEDDVNADDDDFMHSETREKELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRF 120

Query: 155 RDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKEL 214
           RDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKEL
Sbjct: 121 RDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKEL 180

Query: 215 SNLETLY 221
           SNLETLY
Sbjct: 181 SNLETLY 187


>1WCM-D nrPDB
          Length = 177

 Score =  228 bits (581), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 177/218 (81%), Positives = 177/218 (81%), Gaps = 41/218 (18%)

Query: 4   STSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEAL 63
           STSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEAL
Sbjct: 1   STSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEAL 60

Query: 64  VERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETREKEL 123
           VERRRAFKRSQKK                                         TREKEL
Sbjct: 61  VERRRAFKRSQKK-----------------------------------------TREKEL 79

Query: 124 ESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSL 183
           ESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSL
Sbjct: 80  ESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSL 139

Query: 184 ACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221
           ACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY
Sbjct: 140 ACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 177


>5XOG-D nrPDB
          Length = 186

 Score =  216 bits (549), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 99/227 (43%), Positives = 128/227 (56%), Gaps = 48/227 (21%)

Query: 1   MNVSTSTFQTRRRRLKK-VEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVI 59
           MNVSTST   RRRR K+ V++EENA  L+LG EF LKQ +H G E +LIAL+LSE+RL+I
Sbjct: 1   MNVSTSTVGARRRRAKQQVDDEENATLLRLGPEFALKQYDHDGNEHDLIALSLSESRLLI 60

Query: 60  KEALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETR 119
           +EAL  R RA        +   +  E++N E                  DDD+       
Sbjct: 61  REALKARSRA--------RNGGVDIESSNGEI-----------------DDDE------- 88

Query: 120 EKELESIDVLLEQTTGG-NNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTG----LHP 174
                    L + T+G   N  +K T+ YL  F+RF+D+ET  AV QLL ++     LHP
Sbjct: 89  ---------LAKVTSGAVANGVVKKTLDYLNTFARFKDEETCTAVDQLLHNSSDCSVLHP 139

Query: 175 FEVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221
           FE+AQL SL C+  DEA TLIPSL  K  +  L+RIL EL+ LE  Y
Sbjct: 140 FEIAQLSSLGCEDVDEAITLIPSLAAK-KEVNLQRILDELNRLEDPY 185


>3H0G-D nrPDB
          Length = 135

 Score =  112 bits (279), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 1/78 (1%)

Query: 140 DLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLN 199
            +K T+ Y   F+RF+  E   A  ++L +   H FE AQLG+L C+ A+EA+TLIPSL 
Sbjct: 54  VMKKTVAYFNVFARFKTAEATYACERILGNR-FHKFERAQLGTLCCEDAEEARTLIPSLA 112

Query: 200 NKISDDELERILKELSNL 217
           NKI D  L+ IL ELS L
Sbjct: 113 NKIDDQNLQGILDELSTL 130


>5IY7-D nrPDB
          Length = 142

 Score = 96.2 bits (237), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/79 (40%), Positives = 51/79 (64%)

Query: 138 NKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPS 197
           ++    T+ Y   FSRF+++ET+ +V  LL    LH FE+A L +L  +TA+E+K LIPS
Sbjct: 58  SEVFMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPS 117

Query: 198 LNNKISDDELERILKELSN 216
           L  +  D+EL++IL ++  
Sbjct: 118 LEGRFEDEELQQILDDIQT 136


>2PMZ-F nrPDB
          Length = 113

 Score = 39.5 bits (90), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 134 TGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKT 193
           +GG++  L+ T  YL +  +  D E+   VI+ L +        A L S+   T+DE ++
Sbjct: 27  SGGSSNLLQRTYDYLNSVEKC-DAESAQKVIEELSNIVSREDVRAILASICPTTSDEVRS 85

Query: 194 -LIPSLNNKISDDELERILK 212
            L+   N   + +++++I+ 
Sbjct: 86  ILVMDTNKTYTSEDIQKIID 105


>1LQA-A nrPDB
          Length = 346

 Score = 31.8 bits (70), Expect = 0.25,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 66/180 (36%), Gaps = 37/180 (20%)

Query: 61  EALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETRE 120
           +AL E +RA      K +   + +E A      +   D       V   +   + + + E
Sbjct: 162 DALAEYQRA-----GKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFE 216

Query: 121 ------KELESIDVLL-----------EQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAV 163
                  + E +++L            +   G      +NT+   + F+R+  ++T  AV
Sbjct: 217 VGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTL--FSRFTRYSGEQTQKAV 274

Query: 164 IQLLKSTGLHPFEVAQLG-------------SLACDTADEAKTLIPSLNNKISDDELERI 210
              +     H  + AQ+               L   T D+ KT I SL+ ++S+D L  I
Sbjct: 275 AAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSEDVLAEI 334


>5VAT-A nrPDB
          Length = 543

 Score = 28.4 bits (61), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 55/126 (43%), Gaps = 10/126 (7%)

Query: 16  KKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEALVERRRAFKRSQK 75
           + ++++ NA++     EF + ++    E E+     L  AR++I+E  VE+  A  R   
Sbjct: 4   QTLQKDANASS-----EFYINKLGQTQELEDQQTYKLLAARVLIRENKVEQSAALLRELG 58

Query: 76  KHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETREKELESIDVLLEQTTG 135
           +            +   +     +++ ++ + A D + +    + +  E++ ++ E    
Sbjct: 59  ELNDAQKLDRALIEARISAAKNANEVAQNQLRALDLNKLSPSQKSRYYETLAIVAE---- 114

Query: 136 GNNKDL 141
            N KD+
Sbjct: 115 -NRKDM 119


>3O6X-A nrPDB
          Length = 729

 Score = 28.0 bits (60), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 14  RLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVI--KEALVERRRAFK 71
           R+K++  EE    +   ++  +K+I+H+    +++  +++EAR V   KE   E+  A++
Sbjct: 632 RMKEIFSEEEYEVMSADRKELIKEISHRVSAIKVLVRDMTEARKVANHKENFKEKAFAYE 691

Query: 72  RSQKKHKKKHLKHENANDETTAVEDEDDD 100
            + + +       E+  D    +E E DD
Sbjct: 692 ETVRPY------LESIRDHIDHLEMEIDD 714


>6ID1-U nrPDB
          Length = 894

 Score = 26.4 bits (56), Expect = 9.4,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 54/130 (41%), Gaps = 5/130 (3%)

Query: 3   VSTSTFQTRRRRLKKVEEEENAATLQLG-QEFQLKQINHQGEE----EELIALNLSEARL 57
           VS+S+ +  +  ++K+E+E+N A  Q    E +L      G      E+    ++++  +
Sbjct: 165 VSSSSLKAEKETMRKIEQEKNQALEQSKLMERELNPYWKDGGTGLPPEDCSVSSITKVSV 224

Query: 58  VIKEALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSE 117
           V    L   R+++ R +++ +K+    E+   E     +      ED   A      +  
Sbjct: 225 VEDGGLSWLRKSYLRMKEQAEKQSRNFEDIVAERYGSMEIFQSKLEDAEKAASTKEDYRR 284

Query: 118 TREKELESID 127
            R ++    D
Sbjct: 285 ERWRKPTYSD 294


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.302    0.111    0.263 

Lambda     K      H
   0.267   0.0331    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,114,855
Number of Sequences: 36641
Number of extensions: 217133
Number of successful extensions: 1213
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 869
Number of HSP's gapped (non-prelim): 267
length of query: 221
length of database: 10,336,785
effective HSP length: 93
effective length of query: 128
effective length of database: 6,929,172
effective search space: 886934016
effective search space used: 886934016
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.5 bits)
S2: 56 (26.5 bits)