BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P20433 (221 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4BY1-D nrPDB 444 e-125 1Y14-A nrPDB 376 e-105 1PQV-D nrPDB 350 2e-97 1WCM-D nrPDB 333 2e-92 5XOG-D nrPDB 144 4e-35 3H0G-D nrPDB 73 1e-13 5IY7-D nrPDB 69 2e-12 4DN6-A nrPDB 28 2.3 6DZ7-B nrPDB 28 3.0 2E87-A nrPDB 28 4.4 2GTT-A nrPDB 27 6.6 4C7O-A nrPDB 27 7.3 4XKB-A nrPDB 27 7.6 4GLW-A nrPDB 27 9.1 >4BY1-D nrPDB Length = 221 Score = 444 bits (1141), Expect = e-125, Method: Compositional matrix adjust. Identities = 221/221 (100%), Positives = 221/221 (100%) Query: 1 MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK 60 MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK Sbjct: 1 MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK 60 Query: 61 EALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETRE 120 EALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETRE Sbjct: 61 EALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETRE 120 Query: 121 KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL 180 KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL Sbjct: 121 KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL 180 Query: 181 GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221 GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY Sbjct: 181 GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221 >1Y14-A nrPDB Length = 187 Score = 376 bits (965), Expect = e-105, Method: Compositional matrix adjust. Identities = 187/187 (100%), Positives = 187/187 (100%) Query: 35 LKQINHQGEEEELIALNLSEARLVIKEALVERRRAFKRSQKKHKKKHLKHENANDETTAV 94 LKQINHQGEEEELIALNLSEARLVIKEALVERRRAFKRSQKKHKKKHLKHENANDETTAV Sbjct: 1 LKQINHQGEEEELIALNLSEARLVIKEALVERRRAFKRSQKKHKKKHLKHENANDETTAV 60 Query: 95 EDEDDDLDEDDVNADDDDFMHSETREKELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRF 154 EDEDDDLDEDDVNADDDDFMHSETREKELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRF Sbjct: 61 EDEDDDLDEDDVNADDDDFMHSETREKELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRF 120 Query: 155 RDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKEL 214 RDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKEL Sbjct: 121 RDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKEL 180 Query: 215 SNLETLY 221 SNLETLY Sbjct: 181 SNLETLY 187 >1PQV-D nrPDB Length = 221 Score = 350 bits (899), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 192/221 (86%), Positives = 192/221 (86%) Query: 1 MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK 60 MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK Sbjct: 1 MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK 60 Query: 61 EALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETRE 120 EALVERRRAFKRSQKKHKKKHLKHE HSETRE Sbjct: 61 EALVERRRAFKRSQKKHKKKHLKHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSETRE 120 Query: 121 KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL 180 KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL Sbjct: 121 KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL 180 Query: 181 GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221 GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY Sbjct: 181 GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221 >1WCM-D nrPDB Length = 177 Score = 333 bits (855), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 177/218 (81%), Positives = 177/218 (81%), Gaps = 41/218 (18%) Query: 4 STSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEAL 63 STSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEAL Sbjct: 1 STSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEAL 60 Query: 64 VERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETREKEL 123 VERRRAFKRSQKK TREKEL Sbjct: 61 VERRRAFKRSQKK-----------------------------------------TREKEL 79 Query: 124 ESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSL 183 ESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSL Sbjct: 80 ESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSL 139 Query: 184 ACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221 ACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY Sbjct: 140 ACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 177 >5XOG-D nrPDB Length = 186 Score = 144 bits (362), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 99/227 (43%), Positives = 128/227 (56%), Gaps = 48/227 (21%) Query: 1 MNVSTSTFQTRRRRLKK-VEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVI 59 MNVSTST RRRR K+ V++EENA L+LG EF LKQ +H G E +LIAL+LSE+RL+I Sbjct: 1 MNVSTSTVGARRRRAKQQVDDEENATLLRLGPEFALKQYDHDGNEHDLIALSLSESRLLI 60 Query: 60 KEALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETR 119 +EAL R RA + + E++N E DDD+ Sbjct: 61 REALKARSRA--------RNGGVDIESSNGEI-----------------DDDE------- 88 Query: 120 EKELESIDVLLEQTTGG-NNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTG----LHP 174 L + T+G N +K T+ YL F+RF+D+ET AV QLL ++ LHP Sbjct: 89 ---------LAKVTSGAVANGVVKKTLDYLNTFARFKDEETCTAVDQLLHNSSDCSVLHP 139 Query: 175 FEVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221 FE+AQL SL C+ DEA TLIPSL K + L+RIL EL+ LE Y Sbjct: 140 FEIAQLSSLGCEDVDEAITLIPSLAAK-KEVNLQRILDELNRLEDPY 185 >3H0G-D nrPDB Length = 135 Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 1/77 (1%) Query: 141 LKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNN 200 +K T+ Y F+RF+ E A ++L + H FE AQLG+L C+ A+EA+TLIPSL N Sbjct: 55 MKKTVAYFNVFARFKTAEATYACERILGNR-FHKFERAQLGTLCCEDAEEARTLIPSLAN 113 Query: 201 KISDDELERILKELSNL 217 KI D L+ IL ELS L Sbjct: 114 KIDDQNLQGILDELSTL 130 Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 11/48 (22%) Query: 21 EENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEALVERRR 68 EE+AA L+LG EF E E++ L +SEA+++I+ L +R R Sbjct: 7 EEDAAQLKLGPEF---------ENEDM--LTVSEAKILIETVLAQRAR 43 >5IY7-D nrPDB Length = 142 Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 32/68 (47%), Positives = 47/68 (69%) Query: 144 TMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNNKIS 203 T+ Y FSRF+++ET+ +V LL LH FE+A L +L +TA+E+K LIPSL + Sbjct: 64 TLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEGRFE 123 Query: 204 DDELERIL 211 D+EL++IL Sbjct: 124 DEELQQIL 131 >4DN6-A nrPDB Length = 146 Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust. Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Query: 141 LKNTMQYLTNFSRFRDQETVGAVIQLLKST-GLHPFEVAQLGSLACDTADEA 191 L + + + + R+R TVG Q+++ T GL F++ + +A DTA+ A Sbjct: 33 LAHLARLVGDAGRYRVTRTVGRAAQIVQRTDGLDAFDILMIDGVALDTAELA 84 >6DZ7-B nrPDB Length = 735 Score = 28.1 bits (61), Expect = 3.0, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%) Query: 66 RRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETREKELES 125 ++R F+ ++ KK+H K E N A E + L +D+ D+ F+ E ELE Sbjct: 452 KQRVFREYKEYTKKQHAKAEPGNG---AGEKKTVSLGDDE---DEARFLTRVRNEAELED 505 Query: 126 IDV 128 DV Sbjct: 506 YDV 508 >2E87-A nrPDB Length = 357 Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 3/59 (5%) Query: 156 DQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADE--AKTLIPSLNNKISDDELERILK 212 D+E + + + +K GL+P +++ L D E KTL P L K++ +++ER L+ Sbjct: 294 DEENIKRLEKFVKEKGLNPIKISALKGTGIDLVKEEIIKTLRP-LAEKVAREKIERELR 351 >2GTT-A nrPDB Length = 450 Score = 26.9 bits (58), Expect = 6.6, Method: Compositional matrix adjust. Identities = 10/29 (34%), Positives = 17/29 (58%) Query: 102 DEDDVNADDDDFMHSETREKELESIDVLL 130 D+ VN+DD+D+ ETR E +++ Sbjct: 383 DDGTVNSDDEDYFSGETRSPEAVYTRIMM 411 >4C7O-A nrPDB Length = 298 Score = 26.9 bits (58), Expect = 7.3, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 59/144 (40%), Gaps = 24/144 (16%) Query: 12 RRRLKKVEEEENAATLQLGQEFQLKQINHQ-----GEEEELIALNLSEARLVIKEAL--- 63 R + K V E N +L GQEF +K + ++ GEE + + L +V+ L Sbjct: 54 RVKEKAVGHEVNK-SLTPGQEF-VKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGA 111 Query: 64 -----VERRRAFKRSQKKHKKKHL-------KHENANDETTAVEDEDDDLDEDDVNADDD 111 V + F R +KHKKK L + T E D DV Sbjct: 112 GKTTSVGKLGKFLR--EKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPV 169 Query: 112 DFMHSETREKELESIDVLLEQTTG 135 D +++ +E +L+ DVLL T G Sbjct: 170 DIVNAALKEAKLKFYDVLLVDTAG 193 >4XKB-A nrPDB Length = 233 Score = 26.9 bits (58), Expect = 7.6, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 30/103 (29%) Query: 114 MHSETREKELESIDVLLEQTTGGNNKDL----------------KNTMQYLTNFSRFRDQ 157 +H + +K+L +I L E GG L N Q L N +Q Sbjct: 12 LHDASEKKQLTAIAALAEMGEGGQGILLDYLAKNVPLEKPVLAVGNVYQTLRNL----EQ 67 Query: 158 ETVGAVIQLLKSTGLHPFEVAQ----------LGSLACDTADE 190 ET+ +Q TG+ P + AQ LGS +TADE Sbjct: 68 ETITTQLQRNYPTGIFPLQSAQGIDYLPLQEALGSQDFETADE 110 >4GLW-A nrPDB Length = 305 Score = 26.6 bits (57), Expect = 9.1, Method: Compositional matrix adjust. Identities = 11/23 (47%), Positives = 15/23 (65%) Query: 199 NNKISDDELERILKELSNLETLY 221 N +SD E +R+ +EL LET Y Sbjct: 24 NPSVSDSEYDRLYRELVELETAY 46 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4BY1-D nrPDB 288 9e-79 1PQV-D nrPDB 253 4e-68 1Y14-A nrPDB 243 6e-65 1WCM-D nrPDB 228 1e-60 5XOG-D nrPDB 216 7e-57 3H0G-D nrPDB 112 1e-25 5IY7-D nrPDB 96 1e-20 Sequences not found previously or not previously below threshold: 2PMZ-F nrPDB 40 0.001 1LQA-A nrPDB 32 0.25 5VAT-A nrPDB 28 2.5 3O6X-A nrPDB 28 3.2 6ID1-U nrPDB 26 9.4 >4BY1-D nrPDB Length = 221 Score = 288 bits (737), Expect = 9e-79, Method: Composition-based stats. Identities = 221/221 (100%), Positives = 221/221 (100%) Query: 1 MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK 60 MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK Sbjct: 1 MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK 60 Query: 61 EALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETRE 120 EALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETRE Sbjct: 61 EALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETRE 120 Query: 121 KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL 180 KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL Sbjct: 121 KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL 180 Query: 181 GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221 GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY Sbjct: 181 GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221 >1PQV-D nrPDB Length = 221 Score = 253 bits (646), Expect = 4e-68, Method: Composition-based stats. Identities = 192/221 (86%), Positives = 192/221 (86%) Query: 1 MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK 60 MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK Sbjct: 1 MNVSTSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIK 60 Query: 61 EALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETRE 120 EALVERRRAFKRSQKKHKKKHLKHE HSETRE Sbjct: 61 EALVERRRAFKRSQKKHKKKHLKHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSETRE 120 Query: 121 KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL 180 KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL Sbjct: 121 KELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQL 180 Query: 181 GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221 GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY Sbjct: 181 GSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221 >1Y14-A nrPDB Length = 187 Score = 243 bits (619), Expect = 6e-65, Method: Composition-based stats. Identities = 187/187 (100%), Positives = 187/187 (100%) Query: 35 LKQINHQGEEEELIALNLSEARLVIKEALVERRRAFKRSQKKHKKKHLKHENANDETTAV 94 LKQINHQGEEEELIALNLSEARLVIKEALVERRRAFKRSQKKHKKKHLKHENANDETTAV Sbjct: 1 LKQINHQGEEEELIALNLSEARLVIKEALVERRRAFKRSQKKHKKKHLKHENANDETTAV 60 Query: 95 EDEDDDLDEDDVNADDDDFMHSETREKELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRF 154 EDEDDDLDEDDVNADDDDFMHSETREKELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRF Sbjct: 61 EDEDDDLDEDDVNADDDDFMHSETREKELESIDVLLEQTTGGNNKDLKNTMQYLTNFSRF 120 Query: 155 RDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKEL 214 RDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKEL Sbjct: 121 RDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKEL 180 Query: 215 SNLETLY 221 SNLETLY Sbjct: 181 SNLETLY 187 >1WCM-D nrPDB Length = 177 Score = 228 bits (581), Expect = 1e-60, Method: Composition-based stats. Identities = 177/218 (81%), Positives = 177/218 (81%), Gaps = 41/218 (18%) Query: 4 STSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEAL 63 STSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEAL Sbjct: 1 STSTFQTRRRRLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEAL 60 Query: 64 VERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETREKEL 123 VERRRAFKRSQKK TREKEL Sbjct: 61 VERRRAFKRSQKK-----------------------------------------TREKEL 79 Query: 124 ESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSL 183 ESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSL Sbjct: 80 ESIDVLLEQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSL 139 Query: 184 ACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221 ACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY Sbjct: 140 ACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 177 >5XOG-D nrPDB Length = 186 Score = 216 bits (549), Expect = 7e-57, Method: Composition-based stats. Identities = 99/227 (43%), Positives = 128/227 (56%), Gaps = 48/227 (21%) Query: 1 MNVSTSTFQTRRRRLKK-VEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVI 59 MNVSTST RRRR K+ V++EENA L+LG EF LKQ +H G E +LIAL+LSE+RL+I Sbjct: 1 MNVSTSTVGARRRRAKQQVDDEENATLLRLGPEFALKQYDHDGNEHDLIALSLSESRLLI 60 Query: 60 KEALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETR 119 +EAL R RA + + E++N E DDD+ Sbjct: 61 REALKARSRA--------RNGGVDIESSNGEI-----------------DDDE------- 88 Query: 120 EKELESIDVLLEQTTGG-NNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTG----LHP 174 L + T+G N +K T+ YL F+RF+D+ET AV QLL ++ LHP Sbjct: 89 ---------LAKVTSGAVANGVVKKTLDYLNTFARFKDEETCTAVDQLLHNSSDCSVLHP 139 Query: 175 FEVAQLGSLACDTADEAKTLIPSLNNKISDDELERILKELSNLETLY 221 FE+AQL SL C+ DEA TLIPSL K + L+RIL EL+ LE Y Sbjct: 140 FEIAQLSSLGCEDVDEAITLIPSLAAK-KEVNLQRILDELNRLEDPY 185 >3H0G-D nrPDB Length = 135 Score = 112 bits (279), Expect = 1e-25, Method: Composition-based stats. Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 1/78 (1%) Query: 140 DLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPSLN 199 +K T+ Y F+RF+ E A ++L + H FE AQLG+L C+ A+EA+TLIPSL Sbjct: 54 VMKKTVAYFNVFARFKTAEATYACERILGNR-FHKFERAQLGTLCCEDAEEARTLIPSLA 112 Query: 200 NKISDDELERILKELSNL 217 NKI D L+ IL ELS L Sbjct: 113 NKIDDQNLQGILDELSTL 130 >5IY7-D nrPDB Length = 142 Score = 96.2 bits (237), Expect = 1e-20, Method: Composition-based stats. Identities = 32/79 (40%), Positives = 51/79 (64%) Query: 138 NKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKTLIPS 197 ++ T+ Y FSRF+++ET+ +V LL LH FE+A L +L +TA+E+K LIPS Sbjct: 58 SEVFMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPS 117 Query: 198 LNNKISDDELERILKELSN 216 L + D+EL++IL ++ Sbjct: 118 LEGRFEDEELQQILDDIQT 136 >2PMZ-F nrPDB Length = 113 Score = 39.5 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 2/80 (2%) Query: 134 TGGNNKDLKNTMQYLTNFSRFRDQETVGAVIQLLKSTGLHPFEVAQLGSLACDTADEAKT 193 +GG++ L+ T YL + + D E+ VI+ L + A L S+ T+DE ++ Sbjct: 27 SGGSSNLLQRTYDYLNSVEKC-DAESAQKVIEELSNIVSREDVRAILASICPTTSDEVRS 85 Query: 194 -LIPSLNNKISDDELERILK 212 L+ N + +++++I+ Sbjct: 86 ILVMDTNKTYTSEDIQKIID 105 >1LQA-A nrPDB Length = 346 Score = 31.8 bits (70), Expect = 0.25, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 66/180 (36%), Gaps = 37/180 (20%) Query: 61 EALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETRE 120 +AL E +RA K + + +E A + D V + + + + E Sbjct: 162 DALAEYQRA-----GKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFE 216 Query: 121 ------KELESIDVLL-----------EQTTGGNNKDLKNTMQYLTNFSRFRDQETVGAV 163 + E +++L + G +NT+ + F+R+ ++T AV Sbjct: 217 VGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARNTL--FSRFTRYSGEQTQKAV 274 Query: 164 IQLLKSTGLHPFEVAQLG-------------SLACDTADEAKTLIPSLNNKISDDELERI 210 + H + AQ+ L T D+ KT I SL+ ++S+D L I Sbjct: 275 AAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSEDVLAEI 334 >5VAT-A nrPDB Length = 543 Score = 28.4 bits (61), Expect = 2.5, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 55/126 (43%), Gaps = 10/126 (7%) Query: 16 KKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVIKEALVERRRAFKRSQK 75 + ++++ NA++ EF + ++ E E+ L AR++I+E VE+ A R Sbjct: 4 QTLQKDANASS-----EFYINKLGQTQELEDQQTYKLLAARVLIRENKVEQSAALLRELG 58 Query: 76 KHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSETREKELESIDVLLEQTTG 135 + + + +++ ++ + A D + + + + E++ ++ E Sbjct: 59 ELNDAQKLDRALIEARISAAKNANEVAQNQLRALDLNKLSPSQKSRYYETLAIVAE---- 114 Query: 136 GNNKDL 141 N KD+ Sbjct: 115 -NRKDM 119 >3O6X-A nrPDB Length = 729 Score = 28.0 bits (60), Expect = 3.2, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 8/89 (8%) Query: 14 RLKKVEEEENAATLQLGQEFQLKQINHQGEEEELIALNLSEARLVI--KEALVERRRAFK 71 R+K++ EE + ++ +K+I+H+ +++ +++EAR V KE E+ A++ Sbjct: 632 RMKEIFSEEEYEVMSADRKELIKEISHRVSAIKVLVRDMTEARKVANHKENFKEKAFAYE 691 Query: 72 RSQKKHKKKHLKHENANDETTAVEDEDDD 100 + + + E+ D +E E DD Sbjct: 692 ETVRPY------LESIRDHIDHLEMEIDD 714 >6ID1-U nrPDB Length = 894 Score = 26.4 bits (56), Expect = 9.4, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 54/130 (41%), Gaps = 5/130 (3%) Query: 3 VSTSTFQTRRRRLKKVEEEENAATLQLG-QEFQLKQINHQGEE----EELIALNLSEARL 57 VS+S+ + + ++K+E+E+N A Q E +L G E+ ++++ + Sbjct: 165 VSSSSLKAEKETMRKIEQEKNQALEQSKLMERELNPYWKDGGTGLPPEDCSVSSITKVSV 224 Query: 58 VIKEALVERRRAFKRSQKKHKKKHLKHENANDETTAVEDEDDDLDEDDVNADDDDFMHSE 117 V L R+++ R +++ +K+ E+ E + ED A + Sbjct: 225 VEDGGLSWLRKSYLRMKEQAEKQSRNFEDIVAERYGSMEIFQSKLEDAEKAASTKEDYRR 284 Query: 118 TREKELESID 127 R ++ D Sbjct: 285 ERWRKPTYSD 294 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.302 0.111 0.263 Lambda K H 0.267 0.0331 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,114,855 Number of Sequences: 36641 Number of extensions: 217133 Number of successful extensions: 1213 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 65 Number of HSP's that attempted gapping in prelim test: 869 Number of HSP's gapped (non-prelim): 267 length of query: 221 length of database: 10,336,785 effective HSP length: 93 effective length of query: 128 effective length of database: 6,929,172 effective search space: 886934016 effective search space used: 886934016 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.5 bits) S2: 56 (26.5 bits)