BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P20226 (339 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5FUR-A nrPDB 674 0.0 1TGH-A nrPDB 379 e-106 6CNF-R nrPDB 323 5e-89 1QN4-A nrPDB 322 2e-88 5OQJ-O nrPDB 322 2e-88 4V1N-O nrPDB 317 4e-87 4B0A-A nrPDB 313 9e-86 4WZS-D nrPDB 301 2e-82 1MP9-A nrPDB 131 4e-31 2Z8U-A nrPDB 128 3e-30 1D3U-A nrPDB 119 2e-27 3FQD-A nrPDB 30 1.5 3DZV-A nrPDB 29 2.7 >5FUR-A nrPDB Length = 339 Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/339 (100%), Positives = 339/339 (100%) Query: 1 MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQ 60 MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQ Sbjct: 1 MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQ 60 Query: 61 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQGTSGQAPQ 120 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQGTSGQAPQ Sbjct: 61 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQGTSGQAPQ 120 Query: 121 LFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDL 180 LFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDL Sbjct: 121 LFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDL 180 Query: 181 KTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARV 240 KTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARV Sbjct: 181 KTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARV 240 Query: 241 VQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRI 300 VQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRI Sbjct: 241 VQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRI 300 Query: 301 VLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKTT 339 VLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKTT Sbjct: 301 VLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKTT 339 >1TGH-A nrPDB Length = 185 Score = 379 bits (974), Expect = e-106, Method: Compositional matrix adjust. Identities = 182/185 (98%), Positives = 182/185 (98%) Query: 155 ASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIF 214 S SGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIF Sbjct: 1 GSRGSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIF 60 Query: 215 SSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLV 274 SSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLV Sbjct: 61 SSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLV 120 Query: 275 LTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKG 334 LTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKG Sbjct: 121 LTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKG 180 Query: 335 FRKTT 339 FRKTT Sbjct: 181 FRKTT 185 >6CNF-R nrPDB Length = 736 Score = 323 bits (829), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 145/179 (81%), Positives = 163/179 (91%) Query: 159 SGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGK 218 SGIVP LQNIV+TV LGC+LDLKT+AL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGK Sbjct: 387 SGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGK 446 Query: 219 MVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQ 278 MV TGAKSE+ S+LA+RKYAR++QK+GF AKF DFKIQN+VGSCDVKFPIRLEGL +H Sbjct: 447 MVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHG 506 Query: 279 QFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 337 FSSYEPELFPGLIYRM+KP+IVLLIFVSGK+VLTGAK R EIY+AFE IYP+L FRK Sbjct: 507 TFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRK 565 >1QN4-A nrPDB Length = 200 Score = 322 bits (824), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 150/188 (79%), Positives = 166/188 (88%) Query: 150 TPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRT 209 P + SGIVP LQNIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+T Sbjct: 10 NPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKT 69 Query: 210 TALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIR 269 TALIF+SGKMVCTGAKSE+ S++AARKYAR+VQKLGFPAKF DFKIQN+VGSCDVKFPIR Sbjct: 70 TALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIR 129 Query: 270 LEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIY 329 LEGL +H FSSYEPELFPGLIYRM P+IVLLIFVSGK+V+TGAK+R E Y+AFENIY Sbjct: 130 LEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIY 189 Query: 330 PILKGFRK 337 P+L FRK Sbjct: 190 PVLSEFRK 197 >5OQJ-O nrPDB Length = 240 Score = 322 bits (824), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 150/194 (77%), Positives = 169/194 (87%), Gaps = 5/194 (2%) Query: 149 ITPATPASE-----SSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMR 203 I A P SE +SGIVP LQNIV+TV LGC+LDLKT+AL ARNAEYNPKRFAAVIMR Sbjct: 46 IKRAAPESEKDTSATSGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMR 105 Query: 204 IREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCD 263 IREP+TTALIF+SGKMV TGAKSE+ S+LA+RKYAR++QK+GF AKF DFKIQN+VGSCD Sbjct: 106 IREPKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCD 165 Query: 264 VKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYE 323 VKFPIRLEGL +H FSSYEPELFPGLIYRM+KP+IVLLIFVSGK+VLTGAK R EIY+ Sbjct: 166 VKFPIRLEGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQ 225 Query: 324 AFENIYPILKGFRK 337 AFE IYP+L FRK Sbjct: 226 AFEAIYPVLSEFRK 239 >4V1N-O nrPDB Length = 181 Score = 317 bits (812), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 145/179 (81%), Positives = 163/179 (91%) Query: 159 SGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGK 218 SGIVP LQNIV+TV LGC+LDLKT+AL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGK Sbjct: 2 SGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGK 61 Query: 219 MVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQ 278 MV TGAKSE+ S+LA+RKYAR++QK+GF AKF DFKIQN+VGSCDVKFPIRLEGL +H Sbjct: 62 MVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHG 121 Query: 279 QFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 337 FSSYEPELFPGLIYRM+KP+IVLLIFVSGK+VLTGAK R EIY+AFE IYP+L FRK Sbjct: 122 TFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRK 180 >4B0A-A nrPDB Length = 278 Score = 313 bits (801), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 143/177 (80%), Positives = 161/177 (90%) Query: 161 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 220 IVP LQNIV+TV LGC+LDLKT+AL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMV Sbjct: 101 IVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 160 Query: 221 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 280 TGAKSE+ S+LA+RKYAR++QK+GF AKF DFKIQN+VGSCDVKFPIRLEGL +H F Sbjct: 161 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 220 Query: 281 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 337 SSYEPELFPGLIYRM+KP+IVLLIFVSGK+VLTGAK R EIY+AFE IYP+L FRK Sbjct: 221 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRK 277 >4WZS-D nrPDB Length = 200 Score = 301 bits (772), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 137/185 (74%), Positives = 158/185 (85%) Query: 153 TPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTAL 212 T SGI+P LQN+V+TVNL CKLDLK IALRARNAEYNPKRFAAVIMRIREP+TTAL Sbjct: 15 TSVPNRSGIIPTLQNVVATVNLSCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTAL 74 Query: 213 IFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEG 272 IF+SGKMV TGAKSE+ SR+AA++YA+++ KLGF A F DFKIQN+V SCD+KF IRLEG Sbjct: 75 IFASGKMVITGAKSEKSSRMAAQRYAKIIHKLGFNATFDDFKIQNIVSSCDIKFSIRLEG 134 Query: 273 LVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPIL 332 L H + SYEPELFPGLIYRM+KP+IVLLIFVSGK+VLTGAKVR +IY+AF NIYP+L Sbjct: 135 LAYAHSNYCSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDDIYQAFNNIYPVL 194 Query: 333 KGFRK 337 RK Sbjct: 195 IQHRK 199 >1MP9-A nrPDB Length = 198 Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 72/173 (41%), Positives = 106/173 (61%), Gaps = 10/173 (5%) Query: 162 VPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 221 V ++NIV+TV L LDL + N EY+P +F +I R+ P+ T+LIF SGKMV Sbjct: 12 VVNIENIVATVTLDQTLDLYAMERSVPNVEYDPDQFPGLIFRLESPKITSLIFKSGKMVV 71 Query: 222 TGAKSEEQSRLAARKYARVVQKLGF-----PAKFLDFKIQNMVGSCDVKFPIRLEGLVLT 276 TGAKS ++ A ++ + ++K G P +IQN+V S ++ + L+ Sbjct: 72 TGAKSTDELIKAVKRIIKTLKKYGMQLTGKPK----IQIQNIVASANLHVIVNLDKAAFL 127 Query: 277 HQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIY 329 + + YEPE FPGLIYRM +PR+VLLIF SGK+V+TGAK E+++A + I+ Sbjct: 128 LEN-NMYEPEQFPGLIYRMDEPRVVLLIFSSGKMVITGAKREDEVHKAVKKIF 179 Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 26/53 (49%), Positives = 37/53 (69%) Query: 283 YEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 335 Y+P+ FPGLI+R+ P+I LIF SGK+V+TGAK E+ +A + I LK + Sbjct: 42 YDPDQFPGLIFRLESPKITSLIFKSGKMVVTGAKSTDELIKAVKRIIKTLKKY 94 >2Z8U-A nrPDB Length = 188 Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 65/171 (38%), Positives = 106/171 (61%), Gaps = 2/171 (1%) Query: 164 QLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 223 ++ N+V + +G +DL+ +A+ NAEY P++F ++ R+ P+ LIF SGK+ CTG Sbjct: 14 KIVNVVVSTKIGDNIDLEEVAMILENAEYEPEQFPGLVCRLSVPKVALLIFRSGKVNCTG 73 Query: 224 AKSEEQSRLAARKYARVVQKLGFPA-KFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSS 282 AKS+E++ +A +K + ++ G + + KIQNMV + D+ L+ + L + + Sbjct: 74 AKSKEEAEIAIKKIIKELKDAGIDVIENPEIKIQNMVATADLGIEPNLDDIALMVEG-TE 132 Query: 283 YEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILK 333 YEPE FPGL+YR+ P++V+LIF SGKVV+TG K + A + I +K Sbjct: 133 YEPEQFPGLVYRLDDPKVVVLIFGSGKVVITGLKSEEDAKRALKKILDTIK 183 Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 53/81 (65%) Query: 164 QLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 223 ++QN+V+T +LG + +L IAL EY P++F ++ R+ +P+ LIF SGK+V TG Sbjct: 105 KIQNMVATADLGIEPNLDDIALMVEGTEYEPEQFPGLVYRLDDPKVVVLIFGSGKVVITG 164 Query: 224 AKSEEQSRLAARKYARVVQKL 244 KSEE ++ A +K ++++ Sbjct: 165 LKSEEDAKRALKKILDTIKEV 185 >1D3U-A nrPDB Length = 181 Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 66/162 (40%), Positives = 102/162 (62%), Gaps = 2/162 (1%) Query: 164 QLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 223 +++NIV++V+L +LDL+ + N++YNP+ F +I + +P+ LIFSSGK+V TG Sbjct: 10 RIENIVASVDLFAQLDLEKVLDLCPNSKYNPEEFPGIICHLDDPKVALLIFSSGKLVVTG 69 Query: 224 AKSEEQSRLAARKYARVVQKLGFPAKFL-DFKIQNMVGSCDVKFPIRLEGLVLTHQQFSS 282 AKS + A K A+ ++ +G K +QNMV S D+ L+ + LT Sbjct: 70 AKSVQDIERAVAKLAQKLKSIGVKFKRAPQIDVQNMVFSGDIGREFNLDVVALTLPN-CE 128 Query: 283 YEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEA 324 YEPE FPG+IYR+ +P+ V+L+F SGK+V +GAK A+ +EA Sbjct: 129 YEPEQFPGVIYRVKEPKSVILLFSSGKIVCSGAKSEADAWEA 170 Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 35/80 (43%), Positives = 54/80 (67%) Query: 164 QLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 223 +QN+V + ++G + +L +AL N EY P++F VI R++EP++ L+FSSGK+VC+G Sbjct: 101 DVQNMVFSGDIGREFNLDVVALTLPNCEYEPEQFPGVIYRVKEPKSVILLFSSGKIVCSG 160 Query: 224 AKSEEQSRLAARKYARVVQK 243 AKSE + A RK R + K Sbjct: 161 AKSEADAWEAVRKLLRELDK 180 Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 1/64 (1%) Query: 253 FKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVL 312 +I+N+V S D+ + LE VL S Y PE FPG+I + P++ LLIF SGK+V+ Sbjct: 9 LRIENIVASVDLFAQLDLEK-VLDLCPNSKYNPEEFPGIICHLDDPKVALLIFSSGKLVV 67 Query: 313 TGAK 316 TGAK Sbjct: 68 TGAK 71 >3FQD-A nrPDB Length = 899 Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust. Identities = 23/109 (21%), Positives = 51/109 (46%), Gaps = 4/109 (3%) Query: 5 NSLPPYAQGLASPQGAMTPGIPIFSPMMPY-GTGLTPQPIQNTNSLSILEEQQRQQQQQQ 63 N P+ L GA+ I+ +P+ G LT + + +L+ E Q+ Sbjct: 338 NDFLPHLPSLDIRDGAVERLTEIWRASLPHMGGYLT---LDGSVNLARAEVILSAVGNQE 394 Query: 64 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQ 112 ++ +QQ+ ++ + +++QQ++ Q+ + V +Q+S Q+T+ Sbjct: 395 DDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTE 443 >3DZV-A nrPDB Length = 273 Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 14/58 (24%) Query: 209 TTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKL------GFPAKFLDFKIQNMVG 260 T+AL+ + G + ++ EQS LAA YAR V KL G+ A I+N VG Sbjct: 59 TSALVLNLGHL----SQEREQSLLAASDYARQVNKLTVVDLVGYGAS----DIRNEVG 108 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5FUR-A nrPDB 485 e-137 1TGH-A nrPDB 321 3e-88 1QN4-A nrPDB 318 1e-87 4WZS-D nrPDB 310 5e-85 6CNF-R nrPDB 309 1e-84 4V1N-O nrPDB 309 1e-84 4B0A-A nrPDB 305 2e-83 5OQJ-O nrPDB 302 2e-82 1D3U-A nrPDB 245 2e-65 2Z8U-A nrPDB 241 4e-64 1MP9-A nrPDB 238 2e-63 Sequences not found previously or not previously below threshold: 3FQD-A nrPDB 34 0.095 3OB4-A nrPDB 33 0.17 5OPT-g nrPDB 33 0.17 2I1J-A nrPDB 32 0.47 4RM9-A nrPDB 31 0.64 6D6V-H nrPDB 31 0.89 4GNK-E nrPDB 30 1.0 3URH-A nrPDB 30 1.1 3EC7-A nrPDB 30 1.4 2YQJ-A nrPDB 29 2.5 5NIL-D nrPDB 29 3.0 2LCJ-A nrPDB 29 3.1 6GAW-Bv nrPDB 29 3.6 1FXZ-A nrPDB 29 3.6 2D0C-A nrPDB 29 3.9 6FEC-u nrPDB 27 8.8 2O94-A nrPDB 27 9.2 CONVERGED! >5FUR-A nrPDB Length = 339 Score = 485 bits (1248), Expect = e-137, Method: Composition-based stats. Identities = 339/339 (100%), Positives = 339/339 (100%) Query: 1 MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQ 60 MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQ Sbjct: 1 MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQ 60 Query: 61 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQGTSGQAPQ 120 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQGTSGQAPQ Sbjct: 61 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQGTSGQAPQ 120 Query: 121 LFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDL 180 LFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDL Sbjct: 121 LFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDL 180 Query: 181 KTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARV 240 KTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARV Sbjct: 181 KTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARV 240 Query: 241 VQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRI 300 VQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRI Sbjct: 241 VQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRI 300 Query: 301 VLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKTT 339 VLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKTT Sbjct: 301 VLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKTT 339 >1TGH-A nrPDB Length = 185 Score = 321 bits (823), Expect = 3e-88, Method: Composition-based stats. Identities = 182/185 (98%), Positives = 182/185 (98%) Query: 155 ASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIF 214 S SGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIF Sbjct: 1 GSRGSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIF 60 Query: 215 SSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLV 274 SSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLV Sbjct: 61 SSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLV 120 Query: 275 LTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKG 334 LTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKG Sbjct: 121 LTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKG 180 Query: 335 FRKTT 339 FRKTT Sbjct: 181 FRKTT 185 >1QN4-A nrPDB Length = 200 Score = 318 bits (816), Expect = 1e-87, Method: Composition-based stats. Identities = 150/188 (79%), Positives = 166/188 (88%) Query: 150 TPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRT 209 P + SGIVP LQNIVSTVNL CKLDLK IAL+ARNAEYNPKRFAAVIMRIREP+T Sbjct: 10 NPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKT 69 Query: 210 TALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIR 269 TALIF+SGKMVCTGAKSE+ S++AARKYAR+VQKLGFPAKF DFKIQN+VGSCDVKFPIR Sbjct: 70 TALIFASGKMVCTGAKSEDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIR 129 Query: 270 LEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIY 329 LEGL +H FSSYEPELFPGLIYRM P+IVLLIFVSGK+V+TGAK+R E Y+AFENIY Sbjct: 130 LEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETYKAFENIY 189 Query: 330 PILKGFRK 337 P+L FRK Sbjct: 190 PVLSEFRK 197 >4WZS-D nrPDB Length = 200 Score = 310 bits (794), Expect = 5e-85, Method: Composition-based stats. Identities = 137/185 (74%), Positives = 158/185 (85%) Query: 153 TPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTAL 212 T SGI+P LQN+V+TVNL CKLDLK IALRARNAEYNPKRFAAVIMRIREP+TTAL Sbjct: 15 TSVPNRSGIIPTLQNVVATVNLSCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTAL 74 Query: 213 IFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEG 272 IF+SGKMV TGAKSE+ SR+AA++YA+++ KLGF A F DFKIQN+V SCD+KF IRLEG Sbjct: 75 IFASGKMVITGAKSEKSSRMAAQRYAKIIHKLGFNATFDDFKIQNIVSSCDIKFSIRLEG 134 Query: 273 LVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPIL 332 L H + SYEPELFPGLIYRM+KP+IVLLIFVSGK+VLTGAKVR +IY+AF NIYP+L Sbjct: 135 LAYAHSNYCSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDDIYQAFNNIYPVL 194 Query: 333 KGFRK 337 RK Sbjct: 195 IQHRK 199 >6CNF-R nrPDB Length = 736 Score = 309 bits (791), Expect = 1e-84, Method: Composition-based stats. Identities = 145/179 (81%), Positives = 163/179 (91%) Query: 159 SGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGK 218 SGIVP LQNIV+TV LGC+LDLKT+AL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGK Sbjct: 387 SGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGK 446 Query: 219 MVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQ 278 MV TGAKSE+ S+LA+RKYAR++QK+GF AKF DFKIQN+VGSCDVKFPIRLEGL +H Sbjct: 447 MVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHG 506 Query: 279 QFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 337 FSSYEPELFPGLIYRM+KP+IVLLIFVSGK+VLTGAK R EIY+AFE IYP+L FRK Sbjct: 507 TFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRK 565 >4V1N-O nrPDB Length = 181 Score = 309 bits (791), Expect = 1e-84, Method: Composition-based stats. Identities = 145/179 (81%), Positives = 163/179 (91%) Query: 159 SGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGK 218 SGIVP LQNIV+TV LGC+LDLKT+AL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGK Sbjct: 2 SGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGK 61 Query: 219 MVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQ 278 MV TGAKSE+ S+LA+RKYAR++QK+GF AKF DFKIQN+VGSCDVKFPIRLEGL +H Sbjct: 62 MVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHG 121 Query: 279 QFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 337 FSSYEPELFPGLIYRM+KP+IVLLIFVSGK+VLTGAK R EIY+AFE IYP+L FRK Sbjct: 122 TFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRK 180 >4B0A-A nrPDB Length = 278 Score = 305 bits (780), Expect = 2e-83, Method: Composition-based stats. Identities = 143/177 (80%), Positives = 161/177 (90%) Query: 161 IVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMV 220 IVP LQNIV+TV LGC+LDLKT+AL ARNAEYNPKRFAAVIMRIREP+TTALIF+SGKMV Sbjct: 101 IVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMV 160 Query: 221 CTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 280 TGAKSE+ S+LA+RKYAR++QK+GF AKF DFKIQN+VGSCDVKFPIRLEGL +H F Sbjct: 161 VTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLAFSHGTF 220 Query: 281 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 337 SSYEPELFPGLIYRM+KP+IVLLIFVSGK+VLTGAK R EIY+AFE IYP+L FRK Sbjct: 221 SSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSEFRK 277 >5OQJ-O nrPDB Length = 240 Score = 302 bits (772), Expect = 2e-82, Method: Composition-based stats. Identities = 146/183 (79%), Positives = 165/183 (90%) Query: 155 ASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIF 214 S +SGIVP LQNIV+TV LGC+LDLKT+AL ARNAEYNPKRFAAVIMRIREP+TTALIF Sbjct: 57 TSATSGIVPTLQNIVATVTLGCRLDLKTVALHARNAEYNPKRFAAVIMRIREPKTTALIF 116 Query: 215 SSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLV 274 +SGKMV TGAKSE+ S+LA+RKYAR++QK+GF AKF DFKIQN+VGSCDVKFPIRLEGL Sbjct: 117 ASGKMVVTGAKSEDDSKLASRKYARIIQKIGFAAKFTDFKIQNIVGSCDVKFPIRLEGLA 176 Query: 275 LTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKG 334 +H FSSYEPELFPGLIYRM+KP+IVLLIFVSGK+VLTGAK R EIY+AFE IYP+L Sbjct: 177 FSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYQAFEAIYPVLSE 236 Query: 335 FRK 337 FRK Sbjct: 237 FRK 239 >1D3U-A nrPDB Length = 181 Score = 245 bits (625), Expect = 2e-65, Method: Composition-based stats. Identities = 68/178 (38%), Positives = 107/178 (60%), Gaps = 2/178 (1%) Query: 159 SGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGK 218 S + +++NIV++V+L +LDL+ + N++YNP+ F +I + +P+ LIFSSGK Sbjct: 5 SKVKLRIENIVASVDLFAQLDLEKVLDLCPNSKYNPEEFPGIICHLDDPKVALLIFSSGK 64 Query: 219 MVCTGAKSEEQSRLAARKYARVVQKLGFPAKF-LDFKIQNMVGSCDVKFPIRLEGLVLTH 277 +V TGAKS + A K A+ ++ +G K +QNMV S D+ L+ + LT Sbjct: 65 LVVTGAKSVQDIERAVAKLAQKLKSIGVKFKRAPQIDVQNMVFSGDIGREFNLDVVALTL 124 Query: 278 QQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGF 335 YEPE FPG+IYR+ +P+ V+L+F SGK+V +GAK A+ +EA + L + Sbjct: 125 PN-CEYEPEQFPGVIYRVKEPKSVILLFSSGKIVCSGAKSEADAWEAVRKLLRELDKY 181 Score = 82.1 bits (201), Expect = 3e-16, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 1/88 (1%) Query: 246 FPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIF 305 + +I+N+V S D+ + LE ++ S Y PE FPG+I + P++ LLIF Sbjct: 2 VDMSKVKLRIENIVASVDLFAQLDLEKVLDLCPN-SKYNPEEFPGIICHLDDPKVALLIF 60 Query: 306 VSGKVVLTGAKVRAEIYEAFENIYPILK 333 SGK+V+TGAK +I A + LK Sbjct: 61 SSGKLVVTGAKSVQDIERAVAKLAQKLK 88 >2Z8U-A nrPDB Length = 188 Score = 241 bits (614), Expect = 4e-64, Method: Composition-based stats. Identities = 65/175 (37%), Positives = 108/175 (61%), Gaps = 2/175 (1%) Query: 164 QLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG 223 ++ N+V + +G +DL+ +A+ NAEY P++F ++ R+ P+ LIF SGK+ CTG Sbjct: 14 KIVNVVVSTKIGDNIDLEEVAMILENAEYEPEQFPGLVCRLSVPKVALLIFRSGKVNCTG 73 Query: 224 AKSEEQSRLAARKYARVVQKLGFPA-KFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSS 282 AKS+E++ +A +K + ++ G + + KIQNMV + D+ L+ + L + + Sbjct: 74 AKSKEEAEIAIKKIIKELKDAGIDVIENPEIKIQNMVATADLGIEPNLDDIALMVEG-TE 132 Query: 283 YEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 337 YEPE FPGL+YR+ P++V+LIF SGKVV+TG K + A + I +K ++ Sbjct: 133 YEPEQFPGLVYRLDDPKVVVLIFGSGKVVITGLKSEEDAKRALKKILDTIKEVQE 187 Score = 89.8 bits (221), Expect = 2e-18, Method: Composition-based stats. Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 1/84 (1%) Query: 251 LDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKV 310 + KI N+V S + I LE + + + + YEPE FPGL+ R+ P++ LLIF SGKV Sbjct: 11 PEIKIVNVVVSTKIGDNIDLEEVAMILEN-AEYEPEQFPGLVCRLSVPKVALLIFRSGKV 69 Query: 311 VLTGAKVRAEIYEAFENIYPILKG 334 TGAK + E A + I LK Sbjct: 70 NCTGAKSKEEAEIAIKKIIKELKD 93 >1MP9-A nrPDB Length = 198 Score = 238 bits (608), Expect = 2e-63, Method: Composition-based stats. Identities = 72/174 (41%), Positives = 106/174 (60%), Gaps = 2/174 (1%) Query: 162 VPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVC 221 V ++NIV+TV L LDL + N EY+P +F +I R+ P+ T+LIF SGKMV Sbjct: 12 VVNIENIVATVTLDQTLDLYAMERSVPNVEYDPDQFPGLIFRLESPKITSLIFKSGKMVV 71 Query: 222 TGAKSEEQSRLAARKYARVVQKLGFPAK-FLDFKIQNMVGSCDVKFPIRLEGLVLTHQQF 280 TGAKS ++ A ++ + ++K G +IQN+V S ++ + L+ + Sbjct: 72 TGAKSTDELIKAVKRIIKTLKKYGMQLTGKPKIQIQNIVASANLHVIVNLDKAAFLLEN- 130 Query: 281 SSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKG 334 + YEPE FPGLIYRM +PR+VLLIF SGK+V+TGAK E+++A + I+ L Sbjct: 131 NMYEPEQFPGLIYRMDEPRVVLLIFSSGKMVITGAKREDEVHKAVKKIFDKLVE 184 Score = 84.0 bits (206), Expect = 9e-17, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Query: 253 FKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVL 312 I+N+V + + + L + + Y+P+ FPGLI+R+ P+I LIF SGK+V+ Sbjct: 13 VNIENIVATVTLDQTLDLYAMERSVPNV-EYDPDQFPGLIFRLESPKITSLIFKSGKMVV 71 Query: 313 TGAKVRAEIYEAFENIYPILKGF 335 TGAK E+ +A + I LK + Sbjct: 72 TGAKSTDELIKAVKRIIKTLKKY 94 >3FQD-A nrPDB Length = 899 Score = 33.9 bits (76), Expect = 0.095, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 46/98 (46%), Gaps = 7/98 (7%) Query: 62 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQGTSGQAPQL 121 Q+ ++ +QQ+ ++ + +++QQ++ Q+ + V +Q+S Q+T+ + Sbjct: 393 QEDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSS---- 448 Query: 122 FHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPASESS 159 S ++ T P P T +P P+ + + S S Sbjct: 449 -KSTSVDTKP-PKKTQKIDAP-APVDLVNLSEKTSNRS 483 >3OB4-A nrPDB Length = 500 Score = 33.2 bits (74), Expect = 0.17, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 4/75 (5%) Query: 22 TPGIPIFSPMMPY---GTGLTPQPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQ 78 +P +SP PY G G + + N L+ E QR + QQ + Q + Q +Q Sbjct: 406 SPSQDPYSPS-PYDRRGAGSSQHQERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQ 464 Query: 79 QQQQQQQQQQQQQQQ 93 Q+QQ +++ + QQ Sbjct: 465 QEQQFKRELRNLPQQ 479 >5OPT-g nrPDB Length = 236 Score = 33.2 bits (74), Expect = 0.17, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 3/86 (3%) Query: 38 LTPQPIQNTNSLSILEEQQ---RQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 94 L PQP + + L+ +QQ R ++++ + Q+ + Q ++QQ + + Q ++QQ + Sbjct: 140 LQPQPQKQRSQLNQRSQQQHGARPTRKEEGGRTQRGGRDAPQARKQQGRNEPQARKQQGR 199 Query: 95 QAVAAAAVQQSTSQQATQGTSGQAPQ 120 A A Q + QA + APQ Sbjct: 200 DAPQARKQQGRDAPQARKQQGRDAPQ 225 Score = 28.9 bits (63), Expect = 3.3, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 29/51 (56%) Query: 55 QQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQS 105 Q R+QQ + + Q ++QQ + Q ++QQ + Q ++QQ + A ++S Sbjct: 181 QARKQQGRNEPQARKQQGRDAPQARKQQGRDAPQARKQQGRDAPQARNKKS 231 Score = 27.8 bits (60), Expect = 6.3, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Query: 56 QRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQ-QATQGT 114 ++ Q Q Q+Q+ Q Q+ QQQ + ++++ + Q+ + A QQ ++ QA + Sbjct: 138 RKLQPQPQKQRSQLNQRSQQQHGARPTRKEEGGRTQRGGRDAPQARKQQGRNEPQARKQQ 197 Query: 115 SGQAPQLFHSQ 125 APQ Q Sbjct: 198 GRDAPQARKQQ 208 >2I1J-A nrPDB Length = 575 Score = 31.6 bits (70), Expect = 0.47, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 52 LEEQQRQ-QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQA 110 LEEQ RQ Q +++ +Q+Q + Q Q+ ++ + + ++Q+ + + A + S QQ Sbjct: 368 LEEQLRQLQAAKEELEQRQNELQAMMQRLEETKNMEAAERQKLEDEIRAKQEEVSRIQQE 427 Query: 111 TQ 112 + Sbjct: 428 VE 429 Score = 29.7 bits (65), Expect = 1.7, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 31/46 (67%) Query: 53 EEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVA 98 EE+ +Q Q+++ Q + +++ +++QQ+ Q + +Q Q++ +++ A Sbjct: 311 EEKLAKQAQREKLQLEIAARERAEKKQQEYQDRLRQMQEEMERSQA 356 Score = 28.2 bits (61), Expect = 5.9, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 28/42 (66%) Query: 51 ILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 92 + ++ QR++ Q + +++ +++QQ+ Q + +Q Q++ ++ Q Sbjct: 314 LAKQAQREKLQLEIAARERAEKKQQEYQDRLRQMQEEMERSQ 355 >4RM9-A nrPDB Length = 587 Score = 31.2 bits (69), Expect = 0.64, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 32/44 (72%) Query: 52 LEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 95 +E QQ + Q ++++ Q+Q ++QQ + ++++++ +++++Q ++ Sbjct: 301 IEVQQMKAQAREEKHQKQLERQQLETEKKRRETVEREKEQMMRE 344 Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 8/49 (16%), Positives = 35/49 (71%) Query: 45 NTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 93 +T + ++ Q R+++ Q+Q ++QQ + ++++++ +++++Q +++++ Sbjct: 299 DTIEVQQMKAQAREEKHQKQLERQQLETEKKRRETVEREKEQMMREKEE 347 Score = 28.9 bits (63), Expect = 3.3, Method: Composition-based stats. Identities = 8/71 (11%), Positives = 45/71 (63%) Query: 47 NSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQST 106 +++ + + + + ++++ Q+Q ++QQ + ++++++ +++++Q +++++ + + Sbjct: 299 DTIEVQQMKAQAREEKHQKQLERQQLETEKKRRETVEREKEQMMREKEELMLRLQDYEEK 358 Query: 107 SQQATQGTSGQ 117 +++A + S Q Sbjct: 359 TKKAERELSEQ 369 Score = 28.5 bits (62), Expect = 4.1, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 38/67 (56%) Query: 43 IQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAV 102 +Q + + E+ Q+Q ++QQ + ++++++ +++++Q +++++ + Q Sbjct: 303 VQQMKAQAREEKHQKQLERQQLETEKKRRETVEREKEQMMREKEELMLRLQDYEEKTKKA 362 Query: 103 QQSTSQQ 109 ++ S+Q Sbjct: 363 ERELSEQ 369 >6D6V-H nrPDB Length = 542 Score = 30.9 bits (68), Expect = 0.89, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 28/59 (47%) Query: 41 QPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAA 99 Q ++ I E QQ + Q Q + QQ++Q + ++QQQ Q + +Q Q A Sbjct: 30 QENHQVDANDIYENQQMNDESQLNQDVKISQQKEQAVEMIEEQQQNNQDKFKQFQDCMA 88 Score = 29.3 bits (64), Expect = 2.3, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 7/73 (9%) Query: 43 IQNTNSLSILEEQQRQQQQQQQQQQQQQQQ-------QQQQQQQQQQQQQQQQQQQQQQQ 95 ++NTN + +E + Q + +Q+ Q + QQ + Q Q + QQ++Q Sbjct: 5 LENTNLEELEQECFMEDYQHEDVVEQENHQVDANDIYENQQMNDESQLNQDVKISQQKEQ 64 Query: 96 AVAAAAVQQSTSQ 108 AV QQ +Q Sbjct: 65 AVEMIEEQQQNNQ 77 Score = 27.8 bits (60), Expect = 6.4, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 31/65 (47%) Query: 54 EQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQATQG 113 E Q+ + Q Q + QQ++Q + ++QQQ Q + +Q A + + ++ Q Sbjct: 42 ENQQMNDESQLNQDVKISQQKEQAVEMIEEQQQNNQDKFKQFQDCMAHITELNFKRNYQN 101 Query: 114 TSGQA 118 + Q+ Sbjct: 102 LTEQS 106 >4GNK-E nrPDB Length = 259 Score = 30.5 bits (67), Expect = 1.0, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 30/52 (57%) Query: 44 QNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 95 ++ NS+ LEE Q+Q+ + QQQ QQ +++ + Q Q+ Q+Q+ + Sbjct: 198 ESVNSIRRLEEAQKQRHDRLVAGQQQVLQQLAEEEPKLLAQLAQECQEQRAR 249 >3URH-A nrPDB Length = 491 Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 30/91 (32%), Gaps = 13/91 (14%) Query: 241 VQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRI 300 ++ LG +Q M+ D ++G+ F + + F G Sbjct: 89 LEALGVEVANPKLNLQKMMAHKDATVKSNVDGVSFL---FKKNKIDGFQG---------- 135 Query: 301 VLLIFVSGKVVLTGAKVRAEIYEAFENIYPI 331 + GKV +T K ++ EA + Sbjct: 136 TGKVLGQGKVSVTNEKGEEQVLEAKNVVIAT 166 >3EC7-A nrPDB Length = 357 Score = 30.1 bits (66), Expect = 1.4, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 37/88 (42%), Gaps = 5/88 (5%) Query: 213 IFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLD--FKIQNMVGSCDVKFPIRL 270 +F + T A + A +K + + ++GF ++ +++N++ S ++ P+ + Sbjct: 114 VFCEKPLAVTAADCQRVIE-AEQKNGKRMVQIGFMRRYDKGYVQLKNIIDSGEIGQPLMV 172 Query: 271 EGLVLTHQQFSSYEPEL--FPGLIYRMI 296 G Y+ + LI+ + Sbjct: 173 HGRHYNASTVPEYKTPQAIYETLIHEID 200 >2YQJ-A nrPDB Length = 486 Score = 29.3 bits (64), Expect = 2.5, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 34/81 (41%) Query: 52 LEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQSTSQQAT 111 ++ QQ+ +Q Q Q Q QQQ+ Q ++ A + V+Q+ T Sbjct: 3 VKSQQQIIDSFKQANQDQLFQYYDSLTIDQQQEFIDQLSTIEEPAKLISTVEQAIQFSQT 62 Query: 112 QGTSGQAPQLFHSQTLTTAPL 132 TS QL + QT +T L Sbjct: 63 NSTSRNFTQLPNEQTASTLDL 83 >5NIL-D nrPDB Length = 371 Score = 28.9 bits (63), Expect = 3.0, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 36/76 (47%) Query: 43 IQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAV 102 ++ L +++ +Q + Q ++ + + + Q+QQ + + + + +QQ+ A A Sbjct: 83 VKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVS 142 Query: 103 QQSTSQQATQGTSGQA 118 QQ AT+ QA Sbjct: 143 QQDLDNAATEMAVKQA 158 >2LCJ-A nrPDB Length = 185 Score = 28.9 bits (63), Expect = 3.1, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 31/61 (50%), Gaps = 7/61 (11%) Query: 260 GSCDVKFPIRLEGL---VLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFV----SGKVVL 312 D + ++++G+ + + + +E E + ++Y KP+ + ++ +GKVVL Sbjct: 2 FPGDTRILVQIDGVPQKITLRELYELFEDERYENMVYVRKKPKREIKVYSIDLETGKVVL 61 Query: 313 T 313 T Sbjct: 62 T 62 >6GAW-Bv nrPDB Length = 222 Score = 28.9 bits (63), Expect = 3.6, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 34/54 (62%), Gaps = 5/54 (9%) Query: 48 SLSILEEQQRQQQQQQQQQQQQQQQ-----QQQQQQQQQQQQQQQQQQQQQQQA 96 SL+ ++E R QQ ++Q++Q ++Q + Q + +QQQQ++++++QA Sbjct: 95 SLAAMQESLRVQQLAEEQKRQAREQLIEECMAKMPQMIENWRQQQQERREKEQA 148 Score = 27.8 bits (60), Expect = 6.7, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 31/54 (57%) Query: 51 ILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAAAVQQ 104 + EEQ+RQ ++Q ++ + Q + +QQQQ++++++Q + + A Q Sbjct: 108 LAEEQKRQAREQLIEECMAKMPQMIENWRQQQQERREKEQADKDRRARLQAEAQ 161 >1FXZ-A nrPDB Length = 476 Score = 28.9 bits (63), Expect = 3.6, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 29/52 (55%) Query: 43 IQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 94 I +TNSL +Q ++ Q+Q+ + QQ+Q Q Q+ + QQ+++ + Sbjct: 146 IIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGHQSQKGKHQQEEENE 197 >2D0C-A nrPDB Length = 310 Score = 28.5 bits (62), Expect = 3.9, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 18/34 (52%) Query: 290 GLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYE 323 G ++ + +P +V+ + SGKV+ G E + Sbjct: 31 GALFAVKRPDVVITAYRSGKVLFQGKAAEQEAAK 64 >6FEC-u nrPDB Length = 636 Score = 27.4 bits (59), Expect = 8.8, Method: Composition-based stats. Identities = 18/124 (14%), Positives = 62/124 (50%), Gaps = 6/124 (4%) Query: 41 QPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVAAA 100 +P+ +EE+ +++Q++ Q+Q + + +++ +++ + ++ Q++++ + + + Sbjct: 390 KPVDTAAREREVEERLQKEQEKLQRQLDEPKLERRPRERHPSWRSEETQERERSRTGSES 449 Query: 101 AVQQSTSQQATQGTSGQAPQLFHSQTLTTAP---LPGTTPLYPSPMTPMTPITPATPASE 157 + +++ + ++ + ++TL P + P P P P+ + PA P E Sbjct: 450 SQTGTSTTSSRNARRRESEKSLENETLNKEEDCHSPTSKP--PKPDQPLK-VMPAPPPKE 506 Query: 158 SSGI 161 ++ + Sbjct: 507 NAWV 510 >2O94-A nrPDB Length = 112 Score = 27.4 bits (59), Expect = 9.2, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 29/44 (65%) Query: 52 LEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ 95 L E +QQQ+ + QQ+ + Q++ ++ +Q+Q+ ++Q ++Q+ Sbjct: 67 LHEHIKQQQEMLAMKHQQELLEHQRKLERHRQEQELEKQHREQK 110 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.129 0.348 Lambda K H 0.267 0.0398 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,701,517 Number of Sequences: 36641 Number of extensions: 438193 Number of successful extensions: 5540 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 20 Number of HSP's that attempted gapping in prelim test: 2619 Number of HSP's gapped (non-prelim): 943 length of query: 339 length of database: 10,336,785 effective HSP length: 98 effective length of query: 241 effective length of database: 6,745,967 effective search space: 1625778047 effective search space used: 1625778047 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 59 (27.4 bits)