BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P20062 (427 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4ZRP-A nrPDB 842 0.0 2BB6-A nrPDB 576 e-165 4KKJ-A nrPDB 140 8e-34 3KQ4-A nrPDB 105 4e-23 4UHD-A nrPDB 31 0.95 4KE4-A nrPDB 30 1.6 5UE8-A nrPDB 29 4.1 5UF7-A nrPDB 29 4.4 4CQM-B nrPDB 29 4.5 1A47-A nrPDB 28 5.5 5FAL-A nrPDB 28 6.3 1A8Q-A nrPDB 28 8.1 5HV1-A nrPDB 28 9.2 >4ZRP-A nrPDB Length = 409 Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/409 (99%), Positives = 409/409 (100%) Query: 19 EMCEIPEMDSHLVEKLGQHLLPWMDRLSLEHLNPSIYVGLRLSSLQAGTKEDLYLHSLKL 78 EMCEIPEMDSHLVEKLGQHLLPWMDRLSLEHLNPSIYVGLRLSSLQAGTKEDLYLHSLKL Sbjct: 1 EMCEIPEMDSHLVEKLGQHLLPWMDRLSLEHLNPSIYVGLRLSSLQAGTKEDLYLHSLKL 60 Query: 79 GYQQCLLGSAFSEDDGDCQGKPSMGQLALYLLALRANCEFVRGHKGDRLVSQLKWFLEDE 138 GYQQCLLGSAFSEDDGDCQGKPSMGQLALYLLALRANCEFVRGHKGDRLVSQLKWFLEDE Sbjct: 61 GYQQCLLGSAFSEDDGDCQGKPSMGQLALYLLALRANCEFVRGHKGDRLVSQLKWFLEDE 120 Query: 139 KRAIGHDHKGHPHTSYYQYGLGILALCLHQKRVHDSVVDKLLYAVEPFHQGHHSVDTAAM 198 KRAIGHDHKGHPHTSYYQYGLGILALCLHQKRVHDSVVDKLLYAVEPFHQGHHSVDTAAM Sbjct: 121 KRAIGHDHKGHPHTSYYQYGLGILALCLHQKRVHDSVVDKLLYAVEPFHQGHHSVDTAAM 180 Query: 199 AGLAFTCLKRSNFNPGRRQRITMAIRTVREEILKAQTPEGHFGNVYSTPLALQFLMTSPM 258 AGLAFTCLKRSNFNPGRRQRITMAIRTV+EEILKAQTPEGHFGNVYSTPLALQFLMTSPM Sbjct: 181 AGLAFTCLKRSNFNPGRRQRITMAIRTVQEEILKAQTPEGHFGNVYSTPLALQFLMTSPM 240 Query: 259 RGAELGTACLKARVALLASLQDGAFQNALMISQLLPVLNHKTYIDLIFPDCLAPRVMLEP 318 RGAELGTACLKARVALLASLQDGAFQNALMISQLLPVLNHKTYIDLIFPDCLAPRVMLEP Sbjct: 241 RGAELGTACLKARVALLASLQDGAFQNALMISQLLPVLNHKTYIDLIFPDCLAPRVMLEP 300 Query: 319 AAETIPQTQEIISVTLQVLSLLPPYRQSISVLAGSTVEDVLKKAHELGGFTYETQASLSG 378 AAETIPQTQEIISVTLQVLSLLPPYRQSISVLAGSTVEDVLKKAHELGGFTYETQASLSG Sbjct: 301 AAETIPQTQEIISVTLQVLSLLPPYRQSISVLAGSTVEDVLKKAHELGGFTYETQASLSG 360 Query: 379 PYLTSVMGKAAGEREFWQLLRDPNTPLLQGIADYRPKDGETIELRLVSW 427 PYLTSVMGKAAGEREFWQLLRDPNTPLLQGIADYRPKDGETIELRLVSW Sbjct: 361 PYLTSVMGKAAGEREFWQLLRDPNTPLLQGIADYRPKDGETIELRLVSW 409 >2BB6-A nrPDB Length = 414 Score = 576 bits (1485), Expect = e-165, Method: Compositional matrix adjust. Identities = 298/414 (71%), Positives = 336/414 (81%), Gaps = 5/414 (1%) Query: 19 EMCEIPEMDSHLVEKLGQHLLPWMDRLSLEHLNPSIYVGLRLSSLQAGTKEDLYLHSLKL 78 +CEI E+DS LVE+LGQ LLPWMDRLS E LNPSIYVGLRLSSLQAG KE YLHSLKL Sbjct: 1 NICEITEVDSTLVERLGQRLLPWMDRLSQEQLNPSIYVGLRLSSLQAGAKEAHYLHSLKL 60 Query: 79 GYQQCLLGSAFSEDDGDCQGKPSMGQLALYLLALRANCEFVRGHKGDRLVSQLKWFLEDE 138 YQQ LL A ++DD D + KPSMGQLALYLLALRANCEF+ G KGDRLVSQLK FLEDE Sbjct: 61 SYQQSLLRPASNKDDNDSEAKPSMGQLALYLLALRANCEFIGGRKGDRLVSQLKRFLEDE 120 Query: 139 KRAIGHDHKGHPHTSYYQYGLGILALCLHQKRVHDSVVDKLLYAVE---PFHQGHHSVDT 195 KRAIGH+H+GHP TSYYQY LGILALC+HQKRVHDSVV KLLYAVE Q H SVDT Sbjct: 121 KRAIGHNHQGHPRTSYYQYSLGILALCVHQKRVHDSVVGKLLYAVEHKPHLLQDHVSVDT 180 Query: 196 AAMAGLAFTCLKRSNFNPGRRQRITMAIRTVREEILKAQTPEGHFGNVYSTPLALQFLMT 255 AMAG+AF+CL+ SN NP +R RI +A++ V+E+ILKAQTPEG+FGNVYSTPLALQ LM Sbjct: 181 MAMAGMAFSCLELSNLNPKQRNRINLALKRVQEKILKAQTPEGYFGNVYSTPLALQLLMG 240 Query: 256 SPMRGAELGTACLKARVALLASLQDGAFQNALMISQLLPVLNHKTYIDLIFPDCLAPRVM 315 S ELGTACLKA+ AL ASLQ FQN LMISQLLPVLN K+Y+DLI PDC APR + Sbjct: 241 SLRPSVELGTACLKAKAALQASLQHKTFQNPLMISQLLPVLNQKSYVDLISPDCQAPRAL 300 Query: 316 LEPAAETIPQTQ--EIISVTLQVLSLLPPYRQSISVLAGSTVEDVLKKAHELGGFTYETQ 373 LEPA ET PQ + + I V L+V + P YR S+SV AGS++ED+LK A E G F + TQ Sbjct: 301 LEPALETPPQAKVPKFIDVLLKVSGISPSYRHSVSVPAGSSLEDILKNAQEHGRFRFRTQ 360 Query: 374 ASLSGPYLTSVMGKAAGEREFWQLLRDPNTPLLQGIADYRPKDGETIELRLVSW 427 ASLSGP+LTSV+G+ AGEREFWQ+LRDP+TPL QGIADYRPKDGETIELRLV W Sbjct: 361 ASLSGPFLTSVLGRKAGEREFWQVLRDPDTPLQQGIADYRPKDGETIELRLVGW 414 >4KKJ-A nrPDB Length = 467 Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 113/348 (32%), Positives = 171/348 (49%), Gaps = 34/348 (9%) Query: 101 SMGQLALYLLALRA--NCE---FVRGHKGDRLVSQLKWFLEDEKRAIGHDHKGHPHTSYY 155 S G+LAL +LAL N E H D+L ++ + +E+ + H G P T+YY Sbjct: 91 SSGELALIILALGVCRNAEENLIYDYHLIDKLENKFQAEIENMEA-----HNGTPLTNYY 145 Query: 156 QYGLGILALCLHQKRVHDS-VVDKLLYAVEPFHQGHH-SVDTAAMAGLAFTCLKRSNFN- 212 Q L +LALCL + VV+ + ++ G SVDT AMA LA TC+K+S N Sbjct: 146 QLSLDVLALCLFNGNYSTAEVVNHFTPENKNYYFGSQFSVDTGAMAVLALTCVKKSLING 205 Query: 213 -----PGRRQRITMAIRTVREEILKAQTPEGHFGNVYSTPLALQFLMTSPMRGAELGTAC 267 G + I++ +++ E+IL + G GN +ST A+Q L S E C Sbjct: 206 QIKADEGSLKNISIYTKSLVEKILSEKKENGLIGNTFSTGEAMQALFVSSDYYNENDWNC 265 Query: 268 LKARVALLASLQDGAFQNALMISQLLPVLNHKTYIDLIF-PDCLAPRVML-----EPAAE 321 + +L + GAF N +Q+LP L KT++D+ C++ EP Sbjct: 266 QQTLNTVLTEISQGAFSNPNAAAQVLPALMGKTFLDINKDSSCVSASGNFNISADEPITV 325 Query: 322 TIPQTQEIISVTLQVLSLLPPYRQSISVLAGSTVEDVLKKAHELG----GFTYETQASLS 377 T P +Q ISV V + Y +++VL GS V++KA ++ GFT E ++ Sbjct: 326 TPPDSQSYISVNYSV-RINETYFTNVTVLNGSVFLSVMEKAQKMNDTIFGFTMEERS--W 382 Query: 378 GPYLTSVMGKAA--GEREFWQLLRDPNTPLLQGIADYRPKDGETIELR 423 GPY+T + G A +R +W+LL PL QG Y ++GE +E+R Sbjct: 383 GPYITCIQGLCANNNDRTYWELLSG-GEPLSQGAGSYVVRNGENLEVR 429 >3KQ4-A nrPDB Length = 393 Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 115/429 (26%), Positives = 188/429 (43%), Gaps = 59/429 (13%) Query: 21 CEIPEMDSHLVEKLGQHLLPWMDRLSLEHLNPSIYVGLRLSSLQAGTKEDLYLHSLKLGY 80 C +P LV G +L S + NPSI + + L+ + L Sbjct: 2 CSVPSAQEPLVN--GIQVLMENSVTSSAYPNPSILIAMNLAG------------AYNLKA 47 Query: 81 QQCLLGSAFSEDDGDCQGKPSMGQLALYLLALRANCEFVRGHKGDRLVSQLKWFLEDEKR 140 Q+ L S D+ D ++G L L ++AL ++C GD+ VS L+ +E+ Sbjct: 48 QKLLTYQLMSSDNNDL----TIGHLGLTIMALTSSCR----DPGDK-VSILQRQMENWAP 98 Query: 141 AIGHDHKGHPHTSYYQYGLGILALCLHQKRVHDSV------VDKLLYAVEPFHQGHHSVD 194 + + +++Y L ILALC QK ++ LL PF+ VD Sbjct: 99 SSPNAEA----SAFYGPSLAILALC--QKNSEATLPIAVRFAKTLLANSSPFN-----VD 147 Query: 195 TAAMAGLAFTCLKRS---NFNPGRRQRITMAIRTVREEILKAQTPEGHFGNVYSTPLALQ 251 T AMA LA TC+ G R ++ + E+I G G++YST LA+Q Sbjct: 148 TGAMATLALTCMYNKIPVGSEEGYRSLFGQVLKDIVEKISMKIKDNGIIGDIYSTGLAMQ 207 Query: 252 FLMTSPMRGAELGTACLKARVALLASLQDGAFQNALMISQLLPVLNHKTYIDLIFPDCLA 311 L +P ++ C K +L ++ G F N + I+Q+LP L KTY+D+ C + Sbjct: 208 ALSVTP-EPSKKEWNCKKTTDMILNEIKQGKFHNPMSIAQILPSLKGKTYLDVPQVTC-S 265 Query: 312 PRVMLEPAAETI----PQTQEIISVTLQV------LSLLPPYRQSISVLAGSTVEDVLKK 361 P ++P + P + I+V + + LL ++SV +GS + VL++ Sbjct: 266 PDHEVQPTLPSNPGPGPTSASNITVIYTINNQLRGVELLFNETINVSVKSGSVLLVVLEE 325 Query: 362 AHELGG-FTYETQASLSGPYLTSV--MGKAAGEREFWQLLRDPNTPLLQGIADYRPKDGE 418 A F +ET + G ++S+ + + + +WQ L TPL +G+ADY P + E Sbjct: 326 AQRKNPMFKFETTMTSWGLVVSSINNIAENVNHKTYWQFLSGV-TPLNEGVADYIPFNHE 384 Query: 419 TIELRLVSW 427 I + Sbjct: 385 HITANFTQY 393 >4UHD-A nrPDB Length = 282 Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 11/105 (10%) Query: 269 KARVALLASLQDGAFQNALMISQ------LLPVLNHKTYIDLIFPDCLAPRVMLEPAAET 322 K R +L++ +G AL +++ LLP L+ T + + D ++P +E A T Sbjct: 177 KIRQMILSAPPEGVAAAALGMAERPDSTDLLPALSCPTLVLVGQFDAISPPEEMEAMART 236 Query: 323 IPQTQEIISVTLQVLSLLPPYRQSISVLAGSTVEDVLKKAHELGG 367 IPQ+Q ++ + LPP Q V + + L+K H G Sbjct: 237 IPQSQFVV---IPDAGHLPPMEQPERVT--QAIREWLRKVHTEAG 276 >4KE4-A nrPDB Length = 448 Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 8/69 (11%) Query: 231 LKAQTPEGHFGNVY--STPLALQFLMTSPMRGAELGTACLKARVALLASLQDGAFQNALM 288 L+ PEG+FGNV +TPLA +T+ G G A ++ A L + DG ++AL Sbjct: 305 LQPPLPEGYFGNVIFTATPLANAGTVTA---GVAEGAAVIQ---AALDRMDDGYCRSALD 358 Query: 289 ISQLLPVLN 297 +L P L+ Sbjct: 359 YLELQPDLS 367 >5UE8-A nrPDB Length = 961 Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 44/119 (36%), Gaps = 13/119 (10%) Query: 291 QLLPVLNHKTYIDLI-----FPDCLAPRVMLEPAAETIPQTQEIISVTLQVLSLLPPYRQ 345 +LL L++ IDL FP R L+ T+ I ++V L P R Sbjct: 420 KLLDQLHNSLRIDLSMYRNNFPASSPER--LQDLKSTVDLLTSITFFRMKVQELQSPPRA 477 Query: 346 S------ISVLAGSTVEDVLKKAHELGGFTYETQASLSGPYLTSVMGKAAGEREFWQLL 398 S + ST E + HEL G Y+T + G G + +FW L Sbjct: 478 SQVVKDCVKACLNSTYEYIFNNCHELYGREYQTDPAKKGEVPPEEQGPSIKNLDFWSKL 536 >5UF7-A nrPDB Length = 547 Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 44/119 (36%), Gaps = 13/119 (10%) Query: 291 QLLPVLNHKTYIDLI-----FPDCLAPRVMLEPAAETIPQTQEIISVTLQVLSLLPPYRQ 345 +LL L++ IDL FP R L+ T+ I ++V L P R Sbjct: 7 KLLDQLHNSLRIDLSMYRNNFPASSPER--LQDLKSTVDLLTSITFFRMKVQELQSPPRA 64 Query: 346 S------ISVLAGSTVEDVLKKAHELGGFTYETQASLSGPYLTSVMGKAAGEREFWQLL 398 S + ST E + HEL G Y+T + G G + +FW L Sbjct: 65 SQVVKDCVKACLNSTYEYIFNNCHELYGREYQTDPAKKGEVPPEEQGPSIKNLDFWSKL 123 >4CQM-B nrPDB Length = 244 Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust. Identities = 13/34 (38%), Positives = 18/34 (52%) Query: 224 RTVREEILKAQTPEGHFGNVYSTPLALQFLMTSP 257 + ++EE LK P G FG A+ FL+ SP Sbjct: 194 KDLKEEHLKKNIPLGRFGETIEVAHAVVFLLESP 227 >1A47-A nrPDB Length = 683 Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust. Identities = 12/35 (34%), Positives = 19/35 (54%) Query: 388 AAGEREFWQLLRDPNTPLLQGIADYRPKDGETIEL 422 +AGE WQ + N+PL+ + K G+TI + Sbjct: 483 SAGEVAVWQYVSSSNSPLIGHVGPTMTKAGQTITI 517 >5FAL-A nrPDB Length = 448 Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 8/69 (11%) Query: 231 LKAQTPEGHFGNVY--STPLALQFLMTSPMRGAELGTACLKARVALLASLQDGAFQNALM 288 L+ PEG+FGNV +TPLA +T+ G G A ++ A L + +G ++AL Sbjct: 305 LQPPLPEGYFGNVIFTATPLADAGTVTA---GVAEGAAVIQ---AALDRMDEGYCRSALD 358 Query: 289 ISQLLPVLN 297 +L P L+ Sbjct: 359 YLELQPDLS 367 >1A8Q-A nrPDB Length = 274 Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust. Identities = 12/31 (38%), Positives = 17/31 (54%) Query: 123 KGDRLVSQLKWFLEDEKRAIGHDHKGHPHTS 153 GD QLK ++ R I HD +GH H++ Sbjct: 31 NGDAWQDQLKAVVDAGYRGIAHDRRGHGHST 61 >5HV1-A nrPDB Length = 883 Score = 27.7 bits (60), Expect = 9.2, Method: Compositional matrix adjust. Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 26/158 (16%) Query: 213 PGRRQRITMAIRTVREEILKAQTPEGHFGNVYSTPLALQF-LMTSPMRGAELG------- 264 PG R I++A + + + +K PL L F LMT+P G Sbjct: 341 PGNRVYISVAHQQMMTDAMK--------------PLGLSFYLMTTPATMYTAGGRLFVDI 386 Query: 265 TACLKARVALLASLQDGAFQNALMISQLLPVLNHKTYIDLIFPDCLAPR---VMLEPAAE 321 T L A+V+ + + L+ LL V+N K ++ + P P V +P Sbjct: 387 TQSLSAKVSRDMMVNSLGQSDPLIKDALLTVINKKGFLPPL-PTEENPSHATVSGKPPVR 445 Query: 322 TIPQTQEIISVTLQVLSLLPPYRQSISVLAGSTVEDVL 359 +IP + + + + + +QSI +GS + D + Sbjct: 446 SIPDSSSVFELVRNSENSIKHLKQSIETKSGSDLFDFI 483 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4ZRP-A nrPDB 708 0.0 2BB6-A nrPDB 620 e-178 3KQ4-A nrPDB 464 e-131 4KKJ-A nrPDB 416 e-116 Sequences not found previously or not previously below threshold: 5HV1-A nrPDB 47 1e-05 5LTD-A nrPDB 36 0.038 4UHD-A nrPDB 34 0.17 1VJ7-A nrPDB 32 0.49 6G4G-A nrPDB 31 0.92 1BEV-3 nrPDB 31 1.0 2BQ1-I nrPDB 31 1.3 5ENZ-A nrPDB 31 1.5 3KWM-A nrPDB 29 3.6 6D97-A nrPDB 29 5.5 2C5Q-A nrPDB 28 8.2 >4ZRP-A nrPDB Length = 409 Score = 708 bits (1828), Expect = 0.0, Method: Composition-based stats. Identities = 408/409 (99%), Positives = 409/409 (100%) Query: 19 EMCEIPEMDSHLVEKLGQHLLPWMDRLSLEHLNPSIYVGLRLSSLQAGTKEDLYLHSLKL 78 EMCEIPEMDSHLVEKLGQHLLPWMDRLSLEHLNPSIYVGLRLSSLQAGTKEDLYLHSLKL Sbjct: 1 EMCEIPEMDSHLVEKLGQHLLPWMDRLSLEHLNPSIYVGLRLSSLQAGTKEDLYLHSLKL 60 Query: 79 GYQQCLLGSAFSEDDGDCQGKPSMGQLALYLLALRANCEFVRGHKGDRLVSQLKWFLEDE 138 GYQQCLLGSAFSEDDGDCQGKPSMGQLALYLLALRANCEFVRGHKGDRLVSQLKWFLEDE Sbjct: 61 GYQQCLLGSAFSEDDGDCQGKPSMGQLALYLLALRANCEFVRGHKGDRLVSQLKWFLEDE 120 Query: 139 KRAIGHDHKGHPHTSYYQYGLGILALCLHQKRVHDSVVDKLLYAVEPFHQGHHSVDTAAM 198 KRAIGHDHKGHPHTSYYQYGLGILALCLHQKRVHDSVVDKLLYAVEPFHQGHHSVDTAAM Sbjct: 121 KRAIGHDHKGHPHTSYYQYGLGILALCLHQKRVHDSVVDKLLYAVEPFHQGHHSVDTAAM 180 Query: 199 AGLAFTCLKRSNFNPGRRQRITMAIRTVREEILKAQTPEGHFGNVYSTPLALQFLMTSPM 258 AGLAFTCLKRSNFNPGRRQRITMAIRTV+EEILKAQTPEGHFGNVYSTPLALQFLMTSPM Sbjct: 181 AGLAFTCLKRSNFNPGRRQRITMAIRTVQEEILKAQTPEGHFGNVYSTPLALQFLMTSPM 240 Query: 259 RGAELGTACLKARVALLASLQDGAFQNALMISQLLPVLNHKTYIDLIFPDCLAPRVMLEP 318 RGAELGTACLKARVALLASLQDGAFQNALMISQLLPVLNHKTYIDLIFPDCLAPRVMLEP Sbjct: 241 RGAELGTACLKARVALLASLQDGAFQNALMISQLLPVLNHKTYIDLIFPDCLAPRVMLEP 300 Query: 319 AAETIPQTQEIISVTLQVLSLLPPYRQSISVLAGSTVEDVLKKAHELGGFTYETQASLSG 378 AAETIPQTQEIISVTLQVLSLLPPYRQSISVLAGSTVEDVLKKAHELGGFTYETQASLSG Sbjct: 301 AAETIPQTQEIISVTLQVLSLLPPYRQSISVLAGSTVEDVLKKAHELGGFTYETQASLSG 360 Query: 379 PYLTSVMGKAAGEREFWQLLRDPNTPLLQGIADYRPKDGETIELRLVSW 427 PYLTSVMGKAAGEREFWQLLRDPNTPLLQGIADYRPKDGETIELRLVSW Sbjct: 361 PYLTSVMGKAAGEREFWQLLRDPNTPLLQGIADYRPKDGETIELRLVSW 409 >2BB6-A nrPDB Length = 414 Score = 620 bits (1598), Expect = e-178, Method: Composition-based stats. Identities = 298/414 (71%), Positives = 336/414 (81%), Gaps = 5/414 (1%) Query: 19 EMCEIPEMDSHLVEKLGQHLLPWMDRLSLEHLNPSIYVGLRLSSLQAGTKEDLYLHSLKL 78 +CEI E+DS LVE+LGQ LLPWMDRLS E LNPSIYVGLRLSSLQAG KE YLHSLKL Sbjct: 1 NICEITEVDSTLVERLGQRLLPWMDRLSQEQLNPSIYVGLRLSSLQAGAKEAHYLHSLKL 60 Query: 79 GYQQCLLGSAFSEDDGDCQGKPSMGQLALYLLALRANCEFVRGHKGDRLVSQLKWFLEDE 138 YQQ LL A ++DD D + KPSMGQLALYLLALRANCEF+ G KGDRLVSQLK FLEDE Sbjct: 61 SYQQSLLRPASNKDDNDSEAKPSMGQLALYLLALRANCEFIGGRKGDRLVSQLKRFLEDE 120 Query: 139 KRAIGHDHKGHPHTSYYQYGLGILALCLHQKRVHDSVVDKLLYAVE---PFHQGHHSVDT 195 KRAIGH+H+GHP TSYYQY LGILALC+HQKRVHDSVV KLLYAVE Q H SVDT Sbjct: 121 KRAIGHNHQGHPRTSYYQYSLGILALCVHQKRVHDSVVGKLLYAVEHKPHLLQDHVSVDT 180 Query: 196 AAMAGLAFTCLKRSNFNPGRRQRITMAIRTVREEILKAQTPEGHFGNVYSTPLALQFLMT 255 AMAG+AF+CL+ SN NP +R RI +A++ V+E+ILKAQTPEG+FGNVYSTPLALQ LM Sbjct: 181 MAMAGMAFSCLELSNLNPKQRNRINLALKRVQEKILKAQTPEGYFGNVYSTPLALQLLMG 240 Query: 256 SPMRGAELGTACLKARVALLASLQDGAFQNALMISQLLPVLNHKTYIDLIFPDCLAPRVM 315 S ELGTACLKA+ AL ASLQ FQN LMISQLLPVLN K+Y+DLI PDC APR + Sbjct: 241 SLRPSVELGTACLKAKAALQASLQHKTFQNPLMISQLLPVLNQKSYVDLISPDCQAPRAL 300 Query: 316 LEPAAETIPQTQ--EIISVTLQVLSLLPPYRQSISVLAGSTVEDVLKKAHELGGFTYETQ 373 LEPA ET PQ + + I V L+V + P YR S+SV AGS++ED+LK A E G F + TQ Sbjct: 301 LEPALETPPQAKVPKFIDVLLKVSGISPSYRHSVSVPAGSSLEDILKNAQEHGRFRFRTQ 360 Query: 374 ASLSGPYLTSVMGKAAGEREFWQLLRDPNTPLLQGIADYRPKDGETIELRLVSW 427 ASLSGP+LTSV+G+ AGEREFWQ+LRDP+TPL QGIADYRPKDGETIELRLV W Sbjct: 361 ASLSGPFLTSVLGRKAGEREFWQVLRDPDTPLQQGIADYRPKDGETIELRLVGW 414 >3KQ4-A nrPDB Length = 393 Score = 464 bits (1193), Expect = e-131, Method: Composition-based stats. Identities = 115/429 (26%), Positives = 188/429 (43%), Gaps = 59/429 (13%) Query: 21 CEIPEMDSHLVEKLGQHLLPWMDRLSLEHLNPSIYVGLRLSSLQAGTKEDLYLHSLKLGY 80 C +P LV G +L S + NPSI + + L+ + L Sbjct: 2 CSVPSAQEPLVN--GIQVLMENSVTSSAYPNPSILIAMNLAG------------AYNLKA 47 Query: 81 QQCLLGSAFSEDDGDCQGKPSMGQLALYLLALRANCEFVRGHKGDRLVSQLKWFLEDEKR 140 Q+ L S D+ D ++G L L ++AL ++C GD+ VS L+ +E+ Sbjct: 48 QKLLTYQLMSSDNNDL----TIGHLGLTIMALTSSCR----DPGDK-VSILQRQMENWAP 98 Query: 141 AIGHDHKGHPHTSYYQYGLGILALCLHQKRVHDSV------VDKLLYAVEPFHQGHHSVD 194 + + +++Y L ILALC QK ++ LL PF+ VD Sbjct: 99 SSPNAEA----SAFYGPSLAILALC--QKNSEATLPIAVRFAKTLLANSSPFN-----VD 147 Query: 195 TAAMAGLAFTCLKRS---NFNPGRRQRITMAIRTVREEILKAQTPEGHFGNVYSTPLALQ 251 T AMA LA TC+ G R ++ + E+I G G++YST LA+Q Sbjct: 148 TGAMATLALTCMYNKIPVGSEEGYRSLFGQVLKDIVEKISMKIKDNGIIGDIYSTGLAMQ 207 Query: 252 FLMTSPMRGAELGTACLKARVALLASLQDGAFQNALMISQLLPVLNHKTYIDLIFPDCLA 311 L +P ++ C K +L ++ G F N + I+Q+LP L KTY+D+ C + Sbjct: 208 ALSVTP-EPSKKEWNCKKTTDMILNEIKQGKFHNPMSIAQILPSLKGKTYLDVPQVTC-S 265 Query: 312 PRVMLEPAAETI----PQTQEIISVTLQV------LSLLPPYRQSISVLAGSTVEDVLKK 361 P ++P + P + I+V + + LL ++SV +GS + VL++ Sbjct: 266 PDHEVQPTLPSNPGPGPTSASNITVIYTINNQLRGVELLFNETINVSVKSGSVLLVVLEE 325 Query: 362 AHELGG-FTYETQASLSGPYLTSV--MGKAAGEREFWQLLRDPNTPLLQGIADYRPKDGE 418 A F +ET + G ++S+ + + + +WQ L TPL +G+ADY P + E Sbjct: 326 AQRKNPMFKFETTMTSWGLVVSSINNIAENVNHKTYWQFLSGV-TPLNEGVADYIPFNHE 384 Query: 419 TIELRLVSW 427 I + Sbjct: 385 HITANFTQY 393 >4KKJ-A nrPDB Length = 467 Score = 416 bits (1069), Expect = e-116, Method: Composition-based stats. Identities = 129/449 (28%), Positives = 205/449 (45%), Gaps = 50/449 (11%) Query: 4 LGAFLFLLGVLGALTEMCEIPEMDSHLVEKLGQHLLPWMDRLSLEHLNPSIYVGLRLSSL 63 +G LF + L E+CE+ E + ++ L ++ +N + + L+L + Sbjct: 10 VGLLLFSF-IPSQLCEICEVSEENYIRLKPLLNTMIQSNYNRGTSAVN--VVLSLKLVGI 66 Query: 64 QAGTKEDLYLHSLKLGYQQCLLGSAFSEDDGDCQGKPSMGQLALYLLALRA--NCE---F 118 Q T + +K + L S G+LAL +LAL N E Sbjct: 67 QIQTLMQKMIQQIKYNVKSRL-------------SDVSSGELALIILALGVCRNAEENLI 113 Query: 119 VRGHKGDRLVSQLKWFLEDEKRAIGHDHKGHPHTSYYQYGLGILALCLHQKRVHDS-VVD 177 H D+L ++ + +E+ + H G P T+YYQ L +LALCL + VV+ Sbjct: 114 YDYHLIDKLENKFQAEIENME-----AHNGTPLTNYYQLSLDVLALCLFNGNYSTAEVVN 168 Query: 178 KLLYAVEPFHQGHH-SVDTAAMAGLAFTCLKRSNFN------PGRRQRITMAIRTVREEI 230 + ++ G SVDT AMA LA TC+K+S N G + I++ +++ E+I Sbjct: 169 HFTPENKNYYFGSQFSVDTGAMAVLALTCVKKSLINGQIKADEGSLKNISIYTKSLVEKI 228 Query: 231 LKAQTPEGHFGNVYSTPLALQFLMTSPMRGAELGTACLKARVALLASLQDGAFQNALMIS 290 L + G GN +ST A+Q L S E C + +L + GAF N + Sbjct: 229 LSEKKENGLIGNTFSTGEAMQALFVSSDYYNENDWNCQQTLNTVLTEISQGAFSNPNAAA 288 Query: 291 QLLPVLNHKTYIDLIF-PDCLAPRVML-----EPAAETIPQTQEIISVTLQVLSLLPPYR 344 Q+LP L KT++D+ C++ EP T P +Q ISV V + Y Sbjct: 289 QVLPALMGKTFLDINKDSSCVSASGNFNISADEPITVTPPDSQSYISVNYSV-RINETYF 347 Query: 345 QSISVLAGSTVEDVLKKAHELG----GFTYETQASLSGPYLTSVMGKAA--GEREFWQLL 398 +++VL GS V++KA ++ GFT E ++ GPY+T + G A +R +W+LL Sbjct: 348 TNVTVLNGSVFLSVMEKAQKMNDTIFGFTMEERS--WGPYITCIQGLCANNNDRTYWELL 405 Query: 399 RDPNTPLLQGIADYRPKDGETIELRLVSW 427 PL QG Y ++GE +E+R + Sbjct: 406 SG-GEPLSQGAGSYVVRNGENLEVRWSKY 433 >5HV1-A nrPDB Length = 883 Score = 47.1 bits (110), Expect = 1e-05, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 64/167 (38%), Gaps = 11/167 (6%) Query: 212 NPGRRQRITMAIRTVREEILKAQTPEGHFGNVYSTPLALQFLMTSPMRGAELGTACLKAR 271 PG R I++A ++ + A P G + +TP + + +R Sbjct: 340 EPGNRVYISVAH---QQMMTDAMKPLGLSFYLMTTPATMYTAGGRLFVDITQSLSAKVSR 396 Query: 272 VALLASLQDGAFQNALMISQLLPVLNHKTYIDLIFPDCLAPRVML---EPAAETIPQTQE 328 ++ SL + L+ LL V+N K ++ P P +P +IP + Sbjct: 397 DMMVNSLGQ---SDPLIKDALLTVINKKGFLP-PLPTEENPSHATVSGKPPVRSIPDSSS 452 Query: 329 IISVTLQVLSLLPPYRQSISVLAGSTVED-VLKKAHELGGFTYETQA 374 + + + + +QSI +GS + D +++ EL + + Sbjct: 453 VFELVRNSENSIKHLKQSIETKSGSDLFDFIVEDLEELKRVLFNPTS 499 >5LTD-A nrPDB Length = 525 Score = 35.6 bits (80), Expect = 0.038, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 7/89 (7%) Query: 284 QNALMISQLLPVLNHKTYIDLIFPDCLAPRVMLEPAAETIPQTQEIISV------TLQVL 337 N + L P + Y+ P LAP E + PQT V TLQ Sbjct: 157 SNPNGLIALSPS-SENNYLAYPSPQKLAPNPQTEVTLHSNPQTVRNGDVIIFDAKTLQPT 215 Query: 338 SLLPPYRQSISVLAGSTVEDVLKKAHELG 366 S++ +R S++ +A S +L A + G Sbjct: 216 SVIEAHRTSLAAIALSKDGLLLATASDKG 244 >4UHD-A nrPDB Length = 282 Score = 33.6 bits (75), Expect = 0.17, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 6/66 (9%) Query: 268 LKARVALLASLQDGAFQNALMISQ------LLPVLNHKTYIDLIFPDCLAPRVMLEPAAE 321 K R +L++ +G AL +++ LLP L+ T + + D ++P +E A Sbjct: 176 EKIRQMILSAPPEGVAAAALGMAERPDSTDLLPALSCPTLVLVGQFDAISPPEEMEAMAR 235 Query: 322 TIPQTQ 327 TIPQ+Q Sbjct: 236 TIPQSQ 241 >1VJ7-A nrPDB Length = 393 Score = 32.1 bits (71), Expect = 0.49, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%) Query: 211 FNPGRRQRITMAIRTVREEILKAQTPEGHFGNVYSTP 247 N RR+R + + +I T +G FG+VY P Sbjct: 207 MNEKRREREALV-DDIVTKIKSYTTEQGLFGDVYGRP 242 >6G4G-A nrPDB Length = 840 Score = 31.3 bits (69), Expect = 0.92, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 58/174 (33%), Gaps = 26/174 (14%) Query: 155 YQYGLGILALCLHQKRVHDSVVDKLLYAVEPFHQGHHSVDTAAMAGLAFT---------C 205 Y +L + ++ LL A PF+Q H+ + + AG FT C Sbjct: 474 YNLLCDLLHIQPAPNNGSHGSLNHLLKA--PFYQPSHAEELSKSAGCGFTTPLPKDSLNC 531 Query: 206 LKRSNFNPGRRQRITMAIRTVREEILKAQTPEGHFGNVYSTPLALQFLMTSPMRGAELGT 265 + G+ +++ + R E+ + FG P + Sbjct: 532 SCLALQTSGQEEQVNQRLNLNRGEVSATEKTNLPFGR--------------PRVIQKNKD 577 Query: 266 ACLKARVALLASLQDGAFQNALMISQLLPVLNHKTYIDLIFPDCLAPRVMLEPA 319 CL ++ A + + S +P + + PDCL V ++P+ Sbjct: 578 HCLLYHREYVSGFG-KAMKMPMWSSYTVPKPGDTSSLPPTVPDCLRADVRVDPS 630 >1BEV-3 nrPDB Length = 242 Score = 30.9 bits (68), Expect = 1.0, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 4/91 (4%) Query: 307 PDCLAPRVMLEPAAET-IPQTQEIISVTLQVLSLLP-PYRQSISVLAGSTVEDVLKKAHE 364 C+ P +P E IP + QV S+L R+ + + + ++ A + Sbjct: 21 SPCILPD--FQPTPEIFIPGKVNNLLEIAQVESILEANNREGVEGVERYVIPVSVQDALD 78 Query: 365 LGGFTYETQASLSGPYLTSVMGKAAGEREFW 395 + + SGP +S++G A W Sbjct: 79 AQIYALRLELGGSGPLSSSLLGTLAKHYTQW 109 >2BQ1-I nrPDB Length = 319 Score = 30.5 bits (67), Expect = 1.3, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 45/136 (33%), Gaps = 6/136 (4%) Query: 137 DEKRAIGHDHKGHPHTSYYQYGLGILALCLHQKRVHDSVVDKLL---YAVEPFHQGHHSV 193 D R I D H + Y+Y + + L ++ LL Y E + Sbjct: 183 DLIRLIIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRYTEALYA 242 Query: 194 DTAAMAGL-AFTC--LKRSNFNPGRRQRITMAIRTVREEILKAQTPEGHFGNVYSTPLAL 250 +T + + AF C ++ N G + V IL A +P + + + Sbjct: 243 ETGWVNDVKAFLCYNANKALMNLGYEALFPPEMADVNPAILAALSPNADENHDFFSGSGS 302 Query: 251 QFLMTSPMRGAELGTA 266 ++M + + Sbjct: 303 SYVMGKTVETEDEDWN 318 >5ENZ-A nrPDB Length = 385 Score = 30.5 bits (67), Expect = 1.5, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Query: 305 IFPDCLAPRVMLEPAAETIPQTQEIISVTLQVLSLLPPYRQSISVLAGSTVEDVLKKA 362 L MLEP Q +E++ L + P Y +I + +G T+ ++ K+ Sbjct: 19 PLVKALEQEKMLEPIVVVTAQHREMLDSVLSTFEIKPKYDLNI-MKSGQTLSEITSKS 75 >3KWM-A nrPDB Length = 224 Score = 29.0 bits (63), Expect = 3.6, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 2/79 (2%) Query: 314 VMLEPAAETIPQTQEIISVTLQVLSLLPPYRQSISVLAGSTVEDVLKKAHELGGFTYETQ 373 E IP + I+ + L P YR+ G+ + DV ET+ Sbjct: 133 GNFPLPIEVIPMARSYIARQIVKLGGQPVYREQTITDNGNVILDVY-NLKIDNPLKLETE 191 Query: 374 AS-LSGPYLTSVMGKAAGE 391 + ++G + + Sbjct: 192 LNQITGVVTNGIFALKPAD 210 >6D97-A nrPDB Length = 547 Score = 28.6 bits (62), Expect = 5.5, Method: Composition-based stats. Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 1/82 (1%) Query: 314 VMLEPAAETIPQTQEIISVTLQ-VLSLLPPYRQSISVLAGSTVEDVLKKAHELGGFTYET 372 ++P A +P + + S + V + Q ++ + +E VL+ + Sbjct: 406 GAMKPTAVFVPLEEILKSGNFELVTKEIFGPFQVVTEYSEDQLELVLEACERMNAHLTAA 465 Query: 373 QASLSGPYLTSVMGKAAGEREF 394 S +L V+G++ + Sbjct: 466 IVSNDPLFLQDVLGRSVNGTTY 487 >2C5Q-A nrPDB Length = 240 Score = 27.8 bits (60), Expect = 8.2, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 28/92 (30%), Gaps = 7/92 (7%) Query: 319 AAETIPQTQEIISVTLQVL-----SLLPPYRQSISVLAGSTVEDVLKK--AHELGGFTYE 371 A + PQ I+ VL P SV S + L+ + F Sbjct: 35 TAISPPQNSSIVGTAYTVLFAPIDDPRPAVNYIDSVPPNSILVLALEPHLQSQFHPFIKI 94 Query: 372 TQASLSGPYLTSVMGKAAGEREFWQLLRDPNT 403 TQA G T + + +RD + Sbjct: 95 TQAMYGGLMSTRAQYLKSNGTVVFGRIRDVDE 126 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.305 0.122 0.313 Lambda K H 0.267 0.0382 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,335,516 Number of Sequences: 36641 Number of extensions: 512308 Number of successful extensions: 1335 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 1283 Number of HSP's gapped (non-prelim): 36 length of query: 427 length of database: 10,336,785 effective HSP length: 100 effective length of query: 327 effective length of database: 6,672,685 effective search space: 2181967995 effective search space used: 2181967995 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 60 (27.8 bits)