BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P19883 (344 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2B0U-C nrPDB 585 e-167 3B4V-C nrPDB 212 2e-55 1YU6-C nrPDB 51 9e-07 1NUB-A nrPDB 45 5e-05 1TBQ-R nrPDB 41 9e-04 1PCE-A nrPDB 40 0.001 2LEO-A nrPDB 29 2.7 2JXD-A nrPDB 29 3.0 3TJQ-A nrPDB 27 8.9 1XXW-A nrPDB 27 9.3 >2B0U-C nrPDB Length = 288 Score = 585 bits (1508), Expect = e-167, Method: Compositional matrix adjust. Identities = 288/288 (100%), Positives = 288/288 (100%) Query: 30 GNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTSWTEEDVNDNTLFKWMIFNGGAPNCI 89 GNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTSWTEEDVNDNTLFKWMIFNGGAPNCI Sbjct: 1 GNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTSWTEEDVNDNTLFKWMIFNGGAPNCI 60 Query: 90 PCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKAR 149 PCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKAR Sbjct: 61 PCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKAR 120 Query: 150 CKEQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGN 209 CKEQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGN Sbjct: 121 CKEQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGN 180 Query: 210 DGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSL 269 DGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSL Sbjct: 181 DGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSL 240 Query: 270 CDELCPDSKSDEPVCASDNATYASECAMKEAACSSGVLLEVKHSGSCN 317 CDELCPDSKSDEPVCASDNATYASECAMKEAACSSGVLLEVKHSGSCN Sbjct: 241 CDELCPDSKSDEPVCASDNATYASECAMKEAACSSGVLLEVKHSGSCN 288 Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 3/86 (3%) Query: 239 CIKAK-SCEDIQCTGGKKCLWDFKVGRGRCSLCDELCPDSKSDEPVCASDNATYASECAM 297 CI K +CE++ C GKKC + K + RC +C C + PVC D TY +ECA+ Sbjct: 59 CIPCKETCENVDCGPGKKCRMN-KKNKPRC-VCAPDCSNITWKGPVCGLDGKTYRNECAL 116 Query: 298 KEAACSSGVLLEVKHSGSCNSISEDT 323 +A C LEV++ G C D Sbjct: 117 LKARCKEQPELEVQYQGRCKKTCRDV 142 >3B4V-C nrPDB Length = 237 Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 102/214 (47%), Positives = 142/214 (66%), Gaps = 4/214 (1%) Query: 27 AQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTSWTEEDVNDNTLFKWMIFNGGAP 86 A G CWL+Q + C ++ +T++++ ECC++G + T+W+ N + G Sbjct: 7 APGGVCWLQQGQEATCSLVLQTDVTRAECCASGNIDTAWSNLTHPGNKINLLGFL--GLV 64 Query: 87 NCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALL 146 +C+PCK++C+ V+CGPGK CRM +PRC CAPDCS + + VCG DG TYR+EC L Sbjct: 65 HCLPCKDSCDGVECGPGKACRM-LGGRPRCECAPDCSGLPARLQVCGSDGATYRDECELR 123 Query: 147 KARCKEQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRI-CPEPASSEQY 205 ARC+ P+L V Y+GRC+K+C V CP +CVVDQT +A+CV C CP P+S Q Sbjct: 124 AARCRGHPDLSVMYRGRCRKSCEHVVCPRPQSCVVDQTGSAHCVVCRAAPCPVPSSPGQE 183 Query: 206 LCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 239 LCGN+ VTY S+CH+R+ATC LGRSIG+ + G C Sbjct: 184 LCGNNNVTYISSCHMRQATCFLGRSIGVRHAGSC 217 Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 5/130 (3%) Query: 206 LCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRG 265 +CG+DG TY C LR A C + + Y G+C KSCE + C + C+ D + G Sbjct: 108 VCGSDGATYRDECELRAARCRGHPDLSVMYRGRC--RKSCEHVVCPRPQSCVVD-QTGSA 164 Query: 266 RCSLCDEL-CP-DSKSDEPVCASDNATYASECAMKEAACSSGVLLEVKHSGSCNSISEDT 323 C +C CP S + +C ++N TY S C M++A C G + V+H+GSC E+ Sbjct: 165 HCVVCRAAPCPVPSSPGQELCGNNNVTYISSCHMRQATCFLGRSIGVRHAGSCAGTPEEP 224 Query: 324 EEEEEDEDQD 333 E E+++ Sbjct: 225 PGGESAEEEE 234 Score = 30.8 bits (68), Expect = 0.85, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 3/80 (3%) Query: 91 CKETCENVDCGPGKKCRMNKKNKPRCVC--APDCSNITWKGP-VCGLDGKTYRNECALLK 147 C+++CE+V C + C +++ CV A C + G +CG + TY + C + + Sbjct: 141 CRKSCEHVVCPRPQSCVVDQTGSAHCVVCRAAPCPVPSSPGQELCGNNNVTYISSCHMRQ 200 Query: 148 ARCKEQPELEVQYQGRCKKT 167 A C + V++ G C T Sbjct: 201 ATCFLGRSIGVRHAGSCAGT 220 >1YU6-C nrPDB Length = 185 Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 52/210 (24%), Positives = 82/210 (39%), Gaps = 39/210 (18%) Query: 109 NKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGRCKKTC 168 N++ K VC D P+CG DG T+ +EC L + + ++ G C++ Sbjct: 13 NEEGKDVLVCTEDLR------PICGTDGVTH-SECLLCAYNIEYGTNISKEHDGECREA- 64 Query: 169 RDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGNDGVTYSSACHLRKATCLLG 228 V S + CN+ + +CG DGVTY + C L G Sbjct: 65 --VPMDCSRYPNTTSEEGKVMILCNK-------ALNPVCGTDGVTYDNECVLCAHNLEQG 115 Query: 229 RSIGLAYEGKCIKAKSCEDIQCTGGKK--CLWDFKVGRGRCSLCDELCPDSKSDEPVCAS 286 S+G ++G+C K + + C+ K C +++ P+C S Sbjct: 116 TSVGKKHDGECRKELAAVSVDCSEYPKPACTLEYR--------------------PLCGS 155 Query: 287 DNATYASECAMKEAACSSGVLLEVKHSGSC 316 DN TY ++C A S L + H G C Sbjct: 156 DNKTYGNKCNFCNAVVESNGTLTLSHFGKC 185 >1NUB-A nrPDB Length = 229 Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 6/90 (6%) Query: 168 CRDVFCPGSSTCVVDQTNNAYCVTCNRI-CPEPASSEQYLCGNDGVTYSSACHLRKATCL 226 C++ C C +D+ N CV + CP P + +C ND T+ S+CH C Sbjct: 6 CQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 65 Query: 227 L-----GRSIGLAYEGKCIKAKSCEDIQCT 251 L G + L Y G C C D + T Sbjct: 66 LEGTKKGHKLHLDYIGPCKYIPPCLDSELT 95 Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%) Query: 95 CENVDCGPGKKCRMNKKNKPRCVCAPDCS---NITWKGPVCGLDGKTYRNECALLKARC- 150 C+N C GK C +++ N P CVC S I VC D KT+ + C +C Sbjct: 6 CQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 65 Query: 151 ----KEQPELEVQYQGRCK 165 K+ +L + Y G CK Sbjct: 66 LEGTKKGHKLHLDYIGPCK 84 >1TBQ-R nrPDB Length = 103 Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 22/109 (20%) Query: 131 VCGLDGKTYRNECALLKARCKEQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCV 190 VCG DG+TY N C L A+ +PEL + G C+ + C Sbjct: 15 VCGSDGETYSNPCTLNCAKFNGKPELVKVHDGPCEP----------------DEDEDVCQ 58 Query: 191 TCNRICPEPASSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 239 C+ + +CG+D +TY + C L A+ + L +EG C Sbjct: 59 ECD------GDEYKPVCGSDDITYDNNCRLECASISSSPGVELKHEGPC 101 Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 24/115 (20%) Query: 204 QYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKVG 263 +CG+DG TYS+ C L A + ++G C + ED+ Sbjct: 13 HRVCGSDGETYSNPCTLNCAKFNGKPELVKVHDGPCEPDED-EDV--------------- 56 Query: 264 RGRCSLCDELCPDSKSDEPVCASDNATYASECAMKEAACSSGVLLEVKHSGSCNS 318 C CD +PVC SD+ TY + C ++ A+ SS +E+KH G C + Sbjct: 57 ---CQECD-----GDEYKPVCGSDDITYDNNCRLECASISSSPGVELKHEGPCRT 103 Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 121 DCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGRCK 165 +C +K PVCG D TY N C L A P +E++++G C+ Sbjct: 59 ECDGDEYK-PVCGSDDITYDNNCRLECASISSSPGVELKHEGPCR 102 >1PCE-A nrPDB Length = 60 Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Query: 119 APDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGRC 164 +PDCS I PVCG DG TY +EC L AR + + ++++ G C Sbjct: 17 SPDCSRIY--DPVCGTDGVTYESECKLCLARIENKQDIQIVKDGEC 60 Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Query: 191 TCNRICPEPASSEQY--LCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 239 C + P S Y +CG DGVTY S C L A + I + +G+C Sbjct: 10 ICEHMTESPDCSRIYDPVCGTDGVTYESECKLCLARIENKQDIQIVKDGEC 60 Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Query: 265 GRCSLCDELC--PD-SKSDEPVCASDNATYASECAMKEAACSSGVLLEVKHSGSC 316 R +C+ + PD S+ +PVC +D TY SEC + A + +++ G C Sbjct: 6 SRMPICEHMTESPDCSRIYDPVCGTDGVTYESECKLCLARIENKQDIQIVKDGEC 60 >2LEO-A nrPDB Length = 66 Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 19/35 (54%) Query: 282 PVCASDNATYASECAMKEAACSSGVLLEVKHSGSC 316 PVC SD TY +EC + + S ++ H GSC Sbjct: 32 PVCGSDYITYGNECHLCTESLKSNGRVQFLHDGSC 66 Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 17/35 (48%) Query: 130 PVCGLDGKTYRNECALLKARCKEQPELEVQYQGRC 164 PVCG D TY NEC L K ++ + G C Sbjct: 32 PVCGSDYITYGNECHLCTESLKSNGRVQFLHDGSC 66 >2JXD-A nrPDB Length = 62 Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust. Identities = 13/39 (33%), Positives = 21/39 (53%) Query: 278 KSDEPVCASDNATYASECAMKEAACSSGVLLEVKHSGSC 316 + PVC SD +TYA+EC + G +++ +G C Sbjct: 24 RHFNPVCGSDMSTYANECTLCMKIREGGHNIKIIRNGPC 62 Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 7/38 (18%) Query: 119 APDCSNITWKG------PVCGLDGKTYRNECAL-LKAR 149 P+CS G PVCG D TY NEC L +K R Sbjct: 11 TPNCSQYRLPGCPRHFNPVCGSDMSTYANECTLCMKIR 48 >3TJQ-A nrPDB Length = 140 Score = 27.3 bits (59), Expect = 8.9, Method: Compositional matrix adjust. Identities = 12/23 (52%), Positives = 16/23 (69%) Query: 279 SDEPVCASDNATYASECAMKEAA 301 S EPVC SD TYA+ C ++ A+ Sbjct: 96 SSEPVCGSDANTYANLCQLRAAS 118 >1XXW-A nrPDB Length = 119 Score = 27.3 bits (59), Expect = 9.3, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 15/71 (21%) Query: 248 IQCTGGKKCLWDFK-----VGRG----------RCSLCDELCPDSKSDEPVCASDNATYA 292 IQCT K+ WDF GRG RC + C +S ++ C TY+ Sbjct: 9 IQCTVPKRSWWDFADYGCYCGRGGSGTPIDDLDRCCQVHDNCYNSAREQGGCRPKQKTYS 68 Query: 293 SECAMKEAACS 303 EC +CS Sbjct: 69 YECKAGTLSCS 79 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2B0U-C nrPDB 381 e-106 3B4V-C nrPDB 260 7e-70 1YU6-C nrPDB 166 1e-41 1NUB-A nrPDB 109 2e-24 1TBQ-R nrPDB 89 3e-18 1PCE-A nrPDB 58 8e-09 Sequences not found previously or not previously below threshold: 2LEO-A nrPDB 39 0.003 2JXD-A nrPDB 38 0.005 5U8R-A nrPDB 33 0.18 3OV3-A nrPDB 33 0.20 5ES4-B nrPDB 32 0.40 3K7L-A nrPDB 31 0.86 3P11-A nrPDB 31 1.1 1IGR-A nrPDB 30 1.9 3LTF-A nrPDB 29 3.5 5O4O-C nrPDB 29 3.9 5WB8-A nrPDB 28 5.2 4UAO-A nrPDB 28 5.8 5E6W-A nrPDB 27 8.4 4A5W-B nrPDB 27 9.7 CONVERGED! >2B0U-C nrPDB Length = 288 Score = 381 bits (979), Expect = e-106, Method: Composition-based stats. Identities = 288/288 (100%), Positives = 288/288 (100%) Query: 30 GNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTSWTEEDVNDNTLFKWMIFNGGAPNCI 89 GNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTSWTEEDVNDNTLFKWMIFNGGAPNCI Sbjct: 1 GNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTSWTEEDVNDNTLFKWMIFNGGAPNCI 60 Query: 90 PCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKAR 149 PCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKAR Sbjct: 61 PCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKAR 120 Query: 150 CKEQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGN 209 CKEQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGN Sbjct: 121 CKEQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGN 180 Query: 210 DGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSL 269 DGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSL Sbjct: 181 DGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSL 240 Query: 270 CDELCPDSKSDEPVCASDNATYASECAMKEAACSSGVLLEVKHSGSCN 317 CDELCPDSKSDEPVCASDNATYASECAMKEAACSSGVLLEVKHSGSCN Sbjct: 241 CDELCPDSKSDEPVCASDNATYASECAMKEAACSSGVLLEVKHSGSCN 288 Score = 46.3 bits (108), Expect = 2e-05, Method: Composition-based stats. Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 4/86 (4%) Query: 238 KCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLCDELCPDSKSDEPVCASDNATYASECAM 297 C + +CE++ C GKKC + K + RC +C C + PVC D TY +ECA+ Sbjct: 61 PCKE--TCENVDCGPGKKCRMN-KKNKPRC-VCAPDCSNITWKGPVCGLDGKTYRNECAL 116 Query: 298 KEAACSSGVLLEVKHSGSCNSISEDT 323 +A C LEV++ G C D Sbjct: 117 LKARCKEQPELEVQYQGRCKKTCRDV 142 >3B4V-C nrPDB Length = 237 Score = 260 bits (664), Expect = 7e-70, Method: Composition-based stats. Identities = 102/218 (46%), Positives = 142/218 (65%), Gaps = 4/218 (1%) Query: 27 AQAGNCWLRQAKNGRCQVLYKTELSKEECCSTGRLSTSWTEEDVNDNTLFKWMIFNGGAP 86 A G CWL+Q + C ++ +T++++ ECC++G + T+W+ N + G Sbjct: 7 APGGVCWLQQGQEATCSLVLQTDVTRAECCASGNIDTAWSNLTHPGNKINLLGFL--GLV 64 Query: 87 NCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALL 146 +C+PCK++C+ V+CGPGK CRM +PRC CAPDCS + + VCG DG TYR+EC L Sbjct: 65 HCLPCKDSCDGVECGPGKACRM-LGGRPRCECAPDCSGLPARLQVCGSDGATYRDECELR 123 Query: 147 KARCKEQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRI-CPEPASSEQY 205 ARC+ P+L V Y+GRC+K+C V CP +CVVDQT +A+CV C CP P+S Q Sbjct: 124 AARCRGHPDLSVMYRGRCRKSCEHVVCPRPQSCVVDQTGSAHCVVCRAAPCPVPSSPGQE 183 Query: 206 LCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAK 243 LCGN+ VTY S+CH+R+ATC LGRSIG+ + G C Sbjct: 184 LCGNNNVTYISSCHMRQATCFLGRSIGVRHAGSCAGTP 221 Score = 130 bits (326), Expect = 1e-30, Method: Composition-based stats. Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 8/180 (4%) Query: 156 LEVQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGNDGVTYS 215 L + + CK +C V C C + C C + Q +CG+DG TY Sbjct: 61 LGLVHCLPCKDSCDGVECGPGKACRML--GGRPRCECAPDCSGLPARLQ-VCGSDGATYR 117 Query: 216 SACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLCDEL-C 274 C LR A C + + Y G+C K SCE + C + C+ D + G C +C C Sbjct: 118 DECELRAARCRGHPDLSVMYRGRCRK--SCEHVVCPRPQSCVVD-QTGSAHCVVCRAAPC 174 Query: 275 P-DSKSDEPVCASDNATYASECAMKEAACSSGVLLEVKHSGSCNSISEDTEEEEEDEDQD 333 P S + +C ++N TY S C M++A C G + V+H+GSC E+ E E+++ Sbjct: 175 PVPSSPGQELCGNNNVTYISSCHMRQATCFLGRSIGVRHAGSCAGTPEEPPGGESAEEEE 234 Score = 35.5 bits (80), Expect = 0.034, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 9/88 (10%) Query: 91 CKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGP------VCGLDGKTYRNECA 144 C+++CE+V C + C +++ CV C P +CG + TY + C Sbjct: 141 CRKSCEHVVCPRPQSCVVDQTGSAHCVV---CRAAPCPVPSSPGQELCGNNNVTYISSCH 197 Query: 145 LLKARCKEQPELEVQYQGRCKKTCRDVF 172 + +A C + V++ G C T + Sbjct: 198 MRQATCFLGRSIGVRHAGSCAGTPEEPP 225 >1YU6-C nrPDB Length = 185 Score = 166 bits (420), Expect = 1e-41, Method: Composition-based stats. Identities = 52/210 (24%), Positives = 82/210 (39%), Gaps = 39/210 (18%) Query: 109 NKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGRCKKTC 168 N++ K VC D P+CG DG T+ +EC L + + ++ G C++ Sbjct: 13 NEEGKDVLVCTEDLR------PICGTDGVTH-SECLLCAYNIEYGTNISKEHDGECREA- 64 Query: 169 RDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGNDGVTYSSACHLRKATCLLG 228 V S + CN+ + +CG DGVTY + C L G Sbjct: 65 --VPMDCSRYPNTTSEEGKVMILCNK-------ALNPVCGTDGVTYDNECVLCAHNLEQG 115 Query: 229 RSIGLAYEGKCIKAKSCEDIQCTGGKK--CLWDFKVGRGRCSLCDELCPDSKSDEPVCAS 286 S+G ++G+C K + + C+ K C +++ P+C S Sbjct: 116 TSVGKKHDGECRKELAAVSVDCSEYPKPACTLEYR--------------------PLCGS 155 Query: 287 DNATYASECAMKEAACSSGVLLEVKHSGSC 316 DN TY ++C A S L + H G C Sbjct: 156 DNKTYGNKCNFCNAVVESNGTLTLSHFGKC 185 Score = 66.4 bits (160), Expect = 2e-11, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 51/148 (34%), Gaps = 20/148 (13%) Query: 171 VFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGNDGVTYSSACHLRKATCLLGRS 230 V S + C + +CG DGVT+ S C L G + Sbjct: 1 VEVDCSRFPNTTNEEGKDVLVC-------TEDLRPICGTDGVTH-SECLLCAYNIEYGTN 52 Query: 231 IGLAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLCDELCPDSKSDEPVCASDNAT 290 I ++G+C +A + C+ + C +K+ PVC +D T Sbjct: 53 ISKEHDGECREAVP---MDCSRYPNTTSEEGKVMILC---------NKALNPVCGTDGVT 100 Query: 291 YASECAMKEAACSSGVLLEVKHSGSCNS 318 Y +EC + G + KH G C Sbjct: 101 YDNECVLCAHNLEQGTSVGKKHDGECRK 128 >1NUB-A nrPDB Length = 229 Score = 109 bits (271), Expect = 2e-24, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 6/93 (6%) Query: 168 CRDVFCPGSSTCVVDQTNNAYCVTCNRI-CPEPASSEQYLCGNDGVTYSSACHLRKATCL 226 C++ C C +D+ N CV + CP P + +C ND T+ S+CH C Sbjct: 6 CQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 65 Query: 227 L-----GRSIGLAYEGKCIKAKSCEDIQCTGGK 254 L G + L Y G C C D + T Sbjct: 66 LEGTKKGHKLHLDYIGPCKYIPPCLDSELTEFP 98 Score = 43.6 bits (101), Expect = 1e-04, Method: Composition-based stats. Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 8/79 (10%) Query: 95 CENVDCGPGKKCRMNKKNKPRCVCAPDCS---NITWKGPVCGLDGKTYRNECALLKARC- 150 C+N C GK C +++ N P CVC S I VC D KT+ + C +C Sbjct: 6 CQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKCT 65 Query: 151 ----KEQPELEVQYQGRCK 165 K+ +L + Y G CK Sbjct: 66 LEGTKKGHKLHLDYIGPCK 84 Score = 39.8 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 29/83 (34%), Gaps = 6/83 (7%) Query: 244 SCEDIQCTGGKKCLWDFKVGRGRCSLCDELCP-DSKSDEPVCASDNATYASECAMKEAAC 302 C++ C GK C D CP E VC++DN T+ S C C Sbjct: 5 PCQNHHCKHGKVCELDENNTPMCVCQDPTSCPAPIGEFEKVCSNDNKTFDSSCHFFATKC 64 Query: 303 SSGVL-----LEVKHSGSCNSIS 320 + L + + G C I Sbjct: 65 TLEGTKKGHKLHLDYIGPCKYIP 87 >1TBQ-R nrPDB Length = 103 Score = 89.1 bits (219), Expect = 3e-18, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 22/121 (18%) Query: 120 PDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGRCKKTCRDVFCPGSSTC 179 C+ VCG DG+TY N C L A+ +PEL + G C+ Sbjct: 4 EPCACPHALHRVCGSDGETYSNPCTLNCAKFNGKPELVKVHDGPCEP------------- 50 Query: 180 VVDQTNNAYCVTCNRICPEPASSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 239 + C C+ + +CG+D +TY + C L A+ + L +EG C Sbjct: 51 ---DEDEDVCQECD------GDEYKPVCGSDDITYDNNCRLECASISSSPGVELKHEGPC 101 Query: 240 I 240 Sbjct: 102 R 102 Score = 43.2 bits (100), Expect = 2e-04, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 24/115 (20%) Query: 202 SEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCLWDFK 261 + +CG+DG TYS+ C L A + ++G C + Sbjct: 11 ALHRVCGSDGETYSNPCTLNCAKFNGKPELVKVHDGPC-------------------EPD 51 Query: 262 VGRGRCSLCDELCPDSKSDEPVCASDNATYASECAMKEAACSSGVLLEVKHSGSC 316 C CD +PVC SD+ TY + C ++ A+ SS +E+KH G C Sbjct: 52 EDEDVCQECD-----GDEYKPVCGSDDITYDNNCRLECASISSSPGVELKHEGPC 101 >1PCE-A nrPDB Length = 60 Score = 57.5 bits (137), Expect = 8e-09, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Query: 119 APDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGRC 164 +PDCS I PVCG DG TY +EC L AR + + ++++ G C Sbjct: 17 SPDCSRIY--DPVCGTDGVTYESECKLCLARIENKQDIQIVKDGEC 60 Score = 36.7 bits (83), Expect = 0.014, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 22/43 (51%) Query: 197 PEPASSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 239 P+ + +CG DGVTY S C L A + I + +G+C Sbjct: 18 PDCSRIYDPVCGTDGVTYESECKLCLARIENKQDIQIVKDGEC 60 Score = 30.9 bits (68), Expect = 0.90, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 23/50 (46%) Query: 267 CSLCDELCPDSKSDEPVCASDNATYASECAMKEAACSSGVLLEVKHSGSC 316 C E S+ +PVC +D TY SEC + A + +++ G C Sbjct: 11 CEHMTESPDCSRIYDPVCGTDGVTYESECKLCLARIENKQDIQIVKDGEC 60 >2LEO-A nrPDB Length = 66 Score = 39.0 bits (89), Expect = 0.003, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 21/44 (47%) Query: 273 LCPDSKSDEPVCASDNATYASECAMKEAACSSGVLLEVKHSGSC 316 P + PVC SD TY +EC + + S ++ H GSC Sbjct: 23 AIPCPITYLPVCGSDYITYGNECHLCTESLKSNGRVQFLHDGSC 66 Score = 37.1 bits (84), Expect = 0.012, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 18/37 (48%) Query: 203 EQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 239 +CG+D +TY + CHL + + ++G C Sbjct: 30 YLPVCGSDYITYGNECHLCTESLKSNGRVQFLHDGSC 66 Score = 36.7 bits (83), Expect = 0.017, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 17/36 (47%) Query: 129 GPVCGLDGKTYRNECALLKARCKEQPELEVQYQGRC 164 PVCG D TY NEC L K ++ + G C Sbjct: 31 LPVCGSDYITYGNECHLCTESLKSNGRVQFLHDGSC 66 >2JXD-A nrPDB Length = 62 Score = 38.2 bits (87), Expect = 0.005, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 6/52 (11%) Query: 119 APDCSNITWKG------PVCGLDGKTYRNECALLKARCKEQPELEVQYQGRC 164 P+CS G PVCG D TY NEC L + +++ G C Sbjct: 11 TPNCSQYRLPGCPRHFNPVCGSDMSTYANECTLCMKIREGGHNIKIIRNGPC 62 Score = 34.0 bits (76), Expect = 0.11, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 18/49 (36%) Query: 191 TCNRICPEPASSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLAYEGKC 239 P +CG+D TY++ C L G +I + G C Sbjct: 14 CSQYRLPGCPRHFNPVCGSDMSTYANECTLCMKIREGGHNIKIIRNGPC 62 Score = 31.3 bits (69), Expect = 0.65, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 20/35 (57%) Query: 282 PVCASDNATYASECAMKEAACSSGVLLEVKHSGSC 316 PVC SD +TYA+EC + G +++ +G C Sbjct: 28 PVCGSDMSTYANECTLCMKIREGGHNIKIIRNGPC 62 >5U8R-A nrPDB Length = 885 Score = 33.2 bits (74), Expect = 0.18, Method: Composition-based stats. Identities = 36/145 (24%), Positives = 52/145 (35%), Gaps = 32/145 (22%) Query: 91 CKETCENVDCGPGKKCRMNKKNKPRCV---CAPD-------CSNITWKG---PVCGLDGK 137 C++ C + CG N+ P C+ APD C + + G P C + Sbjct: 181 CQKMCPST-CGKRACTENNECCHPECLGSCSAPDNDTACVACRHYYYAGVCVPACPPN-- 237 Query: 138 TYRNE---------CALLKARCKEQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQTNNAY 188 TYR E CA + + E V + G C + C F S + Y Sbjct: 238 TYRFEGWRCVDRDFCANILSAESSDSEGFVIHDGECMQECPSGFIRNGS-------QSMY 290 Query: 189 CVTCNRICPEPASSEQYLCGNDGVT 213 C+ C CP+ E+ D VT Sbjct: 291 CIPCEGPCPKVCEEEKKTKTIDSVT 315 Score = 32.8 bits (73), Expect = 0.20, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 52/180 (28%), Gaps = 24/180 (13%) Query: 111 KNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGR--CKKTC 168 NKP C C + P+C + T NE ++ G+ C + Sbjct: 141 GNKPPKECGDLCPGTMEEKPMC--EKTTINNEYNYRCWTTNRCQKMCPSTCGKRACTENN 198 Query: 169 RDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGNDGVTYSS-AC--HLRKATC 225 +C + A CV C A C + + C A Sbjct: 199 ECCHPECLGSCSAPDNDTA-CVACRHY--YYAGVCVPACPPNTYRFEGWRCVDRDFCANI 255 Query: 226 LLGRSIG----LAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLCDELCPDSKSDE 281 L S + ++G+C++ +C G C C+ CP +E Sbjct: 256 LSAESSDSEGFVIHDGECMQ-------ECPSG---FIRNGSQSMYCIPCEGPCPKVCEEE 305 >3OV3-A nrPDB Length = 393 Score = 32.8 bits (73), Expect = 0.20, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 58/179 (32%), Gaps = 7/179 (3%) Query: 143 CALLKARCKEQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASS 202 C+ +A ++ ++ V+ R K + + T+ +C P Sbjct: 84 CSYKEASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYR 143 Query: 203 EQYLCG-----NDGVTYSSACHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCTGGKKCL 257 L G N + YS ACH+ A + + + G + +CE + Sbjct: 144 LATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEITVLSFRGPNE 203 Query: 258 WDFKVGRGRCSLCDELCPDSKSDEPVCASDNATYASECAMKEAACSSGVLLE--VKHSG 314 DF+ + D +P+ + Y AM+E S + ++ G Sbjct: 204 GDFEALAFQAGFGDGAGAVVVGADPLEGIEKPIYEIAAAMQETVAESQGAVGGHLRAFG 262 >5ES4-B nrPDB Length = 727 Score = 32.1 bits (71), Expect = 0.40, Method: Composition-based stats. Identities = 46/193 (23%), Positives = 65/193 (33%), Gaps = 25/193 (12%) Query: 98 VDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELE 157 V P +CR +++ R +C + +C D C C+ Q Sbjct: 417 VQVLPQCECRCRDQSRDRSLCH---GKGFLECGICRCDTGYIGKNCE-----CQTQGRSS 468 Query: 158 VQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGNDGVTYSSA 217 + +G C+K + C G CV Q C+ P QY C D + Sbjct: 469 QELEGSCRKDNNSIICSGLGDCVCGQ-----CLCHTSDVPGKLIYGQY-CECDTI----N 518 Query: 218 CHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQCT---GGKKCLWDFKV---GRGRCSLCD 271 C G GL + GKC E C + CL +V GRGRC C+ Sbjct: 519 CERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCR-CN 577 Query: 272 ELCPDSKSDEPVC 284 S P+C Sbjct: 578 VCECHSGYQLPLC 590 >3K7L-A nrPDB Length = 422 Score = 30.9 bits (68), Expect = 0.86, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 13/148 (8%) Query: 100 CGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECAL-----LKARCKEQP 154 C + R +++P+C+ S P+CG EC ++ C Sbjct: 188 CSVREHQRYLLRDRPQCILNKPLSTDIVSPPICGNYFVEVGEECDCGSPADCQSACCNAT 247 Query: 155 ELEVQYQGRC--KKTCRDVFCPGSST-CVVDQTNNA---YCVTCNRICPEPASSEQ--YL 206 ++Q++ +C ++ C G+ C + + C + CP Sbjct: 248 TCKLQHEAQCDSEECCEKCKFKGARAECRAAKDDCDLPELCTGQSAECPTDVFQRNGLPC 307 Query: 207 CGNDGVTYSSACHLRKATCLLGRSIGLA 234 N G Y+ C + C+ R G+ Sbjct: 308 QNNQGYCYNGKCPIMTNQCIALRGPGVK 335 >3P11-A nrPDB Length = 522 Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 50/150 (33%), Gaps = 42/150 (28%) Query: 87 NCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNI---TWKGPVC------GLDGK 137 +C PC E C+ GPG + + + + +CAP C+ C G G Sbjct: 163 SCPPCHEVCKGRCWGPGSE---DCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGGCSGP 219 Query: 138 T--------YRNECALLKARC-------------KEQPELEVQYQGRCKKTCRDVFCPGS 176 + N+ RC + P + QY G C +C F Sbjct: 220 QDTDCFACRHFNDSGACVPRCPQPLVYNKLTFQLEPNPHTKYQYGGVCVASCPHNFVVDQ 279 Query: 177 STCV---------VDQTNNAYCVTCNRICP 197 ++CV VD+ C C +CP Sbjct: 280 TSCVRACPPDKMEVDKNGLKMCEPCGGLCP 309 >1IGR-A nrPDB Length = 478 Score = 29.8 bits (65), Expect = 1.9, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 7/74 (9%) Query: 140 RNECALLKARCKEQPELEVQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEP 199 R+ CA + + E V + G C + C F S + YC+ C CP+ Sbjct: 249 RDFCANILSAESSDSEGFVIHDGECMQECPSGFIRNGS-------QSMYCIPCEGPCPKV 301 Query: 200 ASSEQYLCGNDGVT 213 E+ D VT Sbjct: 302 CEEEKKTKTIDSVT 315 Score = 29.4 bits (64), Expect = 2.5, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 52/180 (28%), Gaps = 24/180 (13%) Query: 111 KNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQYQGR--CKKTC 168 NKP C C + P+C + T NE ++ G+ C + Sbjct: 141 GNKPPKECGDLCPGTMEEKPMC--EKTTINNEYNYRCWTTNRCQKMCPSTCGKRACTENN 198 Query: 169 RDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGNDGVTYSS-AC--HLRKATC 225 +C + A CV C A C + + C A Sbjct: 199 ECCHPECLGSCSAPDNDTA-CVACRHY--YYAGVCVPACPPNTYRFEGWRCVDRDFCANI 255 Query: 226 LLGRSIG----LAYEGKCIKAKSCEDIQCTGGKKCLWDFKVGRGRCSLCDELCPDSKSDE 281 L S + ++G+C++ +C G C C+ CP +E Sbjct: 256 LSAESSDSEGFVIHDGECMQ-------ECPSG---FIRNGSQSMYCIPCEGPCPKVCEEE 305 >3LTF-A nrPDB Length = 601 Score = 29.0 bits (63), Expect = 3.5, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 63/201 (31%), Gaps = 27/201 (13%) Query: 65 WTEEDVNDNTLFKWMIFNGGAPNCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSN 124 W+E N + F C C E+C + G G K N + + C+P C+ Sbjct: 142 WSEIVSNGTDAYYNYDFTAPERECPKCHESCTHGCWGEGPK---NCQKFSKLTCSPQCAG 198 Query: 125 ITWKGPVCGLDGKTYRNEC--ALLKARCKEQPELEVQY------QGRCKKTCRDVFCPGS 176 GP EC C + + +G CK+ C + Sbjct: 199 GRCYGP--------KPRECCHLFCAGGCTGPTQKDCIACKNFFDEGVCKEECPPMRKYNP 250 Query: 177 STCVVDQTNN---AYCVTCNRICP----EPASSEQYLCGNDGVTYSSACHLRKATCLLG- 228 +T V++ AY TC + CP + C D + C C Sbjct: 251 TTYVLETNPEGKYAYGATCVKECPGHLLRDNGACVRSCPQDKMDKGGECVPCNGPCPKTC 310 Query: 229 RSIGLAYEGKCIKAKSCEDIQ 249 + + + G ++C I Sbjct: 311 PGVTVLHAGNIDSFRNCTVID 331 >5O4O-C nrPDB Length = 649 Score = 28.6 bits (62), Expect = 3.9, Method: Composition-based stats. Identities = 33/150 (22%), Positives = 50/150 (33%), Gaps = 42/150 (28%) Query: 87 NCIPCKETCENVDCGPGKKCRMNKKNKPRCVCAPDCSNI---TWKGPVC------GLDGK 137 +C PC E C+ GPG + + + + +CAP C+ C G G Sbjct: 182 SCPPCHEVCKGRCWGPGSE---DCQTLTKTICAPQCNGHCFGPNPNQCCHDECAGGCSGP 238 Query: 138 T--------YRNECALLKARC-------------KEQPELEVQYQGRCKKTCRDVFCPGS 176 + N+ RC + P + QY G C +C F Sbjct: 239 QDTDCFACRHFNDSGACVPRCPQPLVYNKLTFQLEPNPHTKYQYGGVCVASCPHNFVVDQ 298 Query: 177 STCV---------VDQTNNAYCVTCNRICP 197 ++CV VD+ C C +CP Sbjct: 299 TSCVRACPPDKMEVDKNGLKMCEPCGGLCP 328 >5WB8-A nrPDB Length = 507 Score = 28.2 bits (61), Expect = 5.2, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 61/193 (31%), Gaps = 29/193 (15%) Query: 62 STSWTEEDVNDNTLFKWMIFNGGAPNCIPCKETCENVDC-GPGKKCRMNKKNKPRCVCAP 120 S W + +D M F +C C +C N C G G++ N + + +CA Sbjct: 137 SIQWRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEE---NCQKLTKIICAQ 193 Query: 121 DCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELEVQY---QGRCKKTCRDVFCPGSS 177 CS N+CA +E L + + CK TC + + Sbjct: 194 QCSGRCRGK----SPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPT 249 Query: 178 TCVVDQTNN---AYCVTCNRICP-----EPASSEQYLCGNDGVTYSSACHLRKATCLLGR 229 T +D ++ TC + CP S CG D + C Sbjct: 250 TYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCKKC---- 305 Query: 230 SIGLAYEGKCIKA 242 EG C K Sbjct: 306 ------EGPCRKV 312 >4UAO-A nrPDB Length = 370 Score = 28.2 bits (61), Expect = 5.8, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 25/82 (30%), Gaps = 3/82 (3%) Query: 175 GSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGNDGVTYSSACHLRKATCLLGRSIGLA 234 G C D N E + YL N + + C L GL Sbjct: 164 GPRYCSPDSQNKDAMFCFKPDKNEKFDNLVYLSKNVRNDWENKC---PRKNLGNAKFGLW 220 Query: 235 YEGKCIKAKSCEDIQCTGGKKC 256 +G C + +++ ++C Sbjct: 221 VDGNCEEIPYVNEVEARSLREC 242 >5E6W-A nrPDB Length = 317 Score = 27.5 bits (59), Expect = 8.4, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 49/153 (32%), Gaps = 18/153 (11%) Query: 98 VDCGPGKKCRMNKKNKPRCVCAPDCSNITWKGPVCGLDGKTYRNECALLKARCKEQPELE 157 V P +CR +++ R +C + +C D C C+ Q Sbjct: 178 VQVLPQCECRCRDQSRDRSLCH---GKGFLECGICRCDTGYIGKNCE-----CQTQGRSS 229 Query: 158 VQYQGRCKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGNDGVTYSSA 217 + +G C+K + C G CV Q C+ P QY C D + Sbjct: 230 QELEGSCRKDNNSIICSGLGDCVCGQ-----CLCHTSDVPGKLIYGQY-CECDTI----N 279 Query: 218 CHLRKATCLLGRSIGLAYEGKCIKAKSCEDIQC 250 C G GL + GKC E C Sbjct: 280 CERYNGQVCGGPGRGLCFCGKCRCHPGFEGSAC 312 >4A5W-B nrPDB Length = 913 Score = 27.5 bits (59), Expect = 9.7, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 47/172 (27%), Gaps = 19/172 (11%) Query: 164 CKKTCRDVFCPGSSTCVVDQTNNAYCVTCNRICPEPASSEQYLCGNDGVTYSS-ACHLRK 222 C+K + C++ C + + ++S AC Sbjct: 740 CEKDTLTKLKGHCQLGQKQSGSECICMSPEEDCSHHSEDLCVFDTDSNDYFTSPACKFLA 799 Query: 223 ATCLLGRSIGLAYEGKCIK--------AKSCEDIQCTGGKKCLWDFKVGRGRCSLCDELC 274 CL + + + G C ++ T + C +D +CS C Sbjct: 800 EKCLNNQQLHFLHIGSCQDGRQLEWGLERTRLSSNSTKKESCGYDTCYDWEKCSASTSKC 859 Query: 275 PDSKSDEPVCASD--------NATYASECAMKEAACS--SGVLLEVKHSGSC 316 + + ++T + E + +E+ H G C Sbjct: 860 VCLLPPQCFKGGNQLYCVKMGSSTSEKTLNICEVGTIRCANRKMEILHPGKC 911 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.123 0.373 Lambda K H 0.267 0.0383 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,085,642 Number of Sequences: 36641 Number of extensions: 519221 Number of successful extensions: 1706 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 88 Number of HSP's that attempted gapping in prelim test: 1496 Number of HSP's gapped (non-prelim): 193 length of query: 344 length of database: 10,336,785 effective HSP length: 98 effective length of query: 246 effective length of database: 6,745,967 effective search space: 1659507882 effective search space used: 1659507882 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 59 (27.4 bits)