BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P19801 (751 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3K5T-A nrPDB 1514 0.0 2PNC-A nrPDB 540 e-153 1US1-A nrPDB 514 e-146 1RKY-A nrPDB 259 4e-69 3PGB-A nrPDB 233 3e-61 3LOY-A nrPDB 138 1e-32 1D6Z-A nrPDB 137 2e-32 1KSI-A nrPDB 122 6e-28 2CG0-A nrPDB 117 2e-26 3NBJ-A nrPDB 106 3e-23 2P3E-A nrPDB 35 0.14 3IHG-A nrPDB 31 2.5 6GVK-A nrPDB 30 4.4 1WDI-A nrPDB 29 9.5 3VQT-A nrPDB 29 9.6 >3K5T-A nrPDB Length = 731 Score = 1514 bits (3921), Expect = 0.0, Method: Compositional matrix adjust. Identities = 728/730 (99%), Positives = 729/730 (99%) Query: 22 SPGTLPRKAGVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKNTVFLIEMLLPKKYH 81 SPGTLPRKAGVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKNTVFLIEMLLPKKYH Sbjct: 2 SPGTLPRKAGVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKNTVFLIEMLLPKKYH 61 Query: 82 VLRFLDKGERHPVREARAVIFFGDQEHPNVTEFAVGPLPGPCYMRALSPRPGYQSSWASR 141 VLRFLDKGERHPVREARAVIFFGDQEHPNVTEFAVGPLPGPCYMRALSPRPGYQSSWASR Sbjct: 62 VLRFLDKGERHPVREARAVIFFGDQEHPNVTEFAVGPLPGPCYMRALSPRPGYQSSWASR 121 Query: 142 PISTAEYALLYHTLQEATKPLHQFFLNTTGFSFQDCHDRCLAFTDVAPRGVASGQRRSWL 201 PISTAEYALLYHTLQEATKPLHQFFLNTTGFSFQDCHDRCLAFTDVAPRGVASGQRRSWL Sbjct: 122 PISTAEYALLYHTLQEATKPLHQFFLNTTGFSFQDCHDRCLAFTDVAPRGVASGQRRSWL 181 Query: 202 IIQRYVEGYFLHPTGLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYADGEVDVV 261 IIQRYVEGYFLHPTGLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYADGEVDVV Sbjct: 182 IIQRYVEGYFLHPTGLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYADGEVDVV 241 Query: 262 VLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQPHGPRFRLEGNAVLYGG 321 VLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQPHGPRFRLEGNAVLYGG Sbjct: 242 VLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQPHGPRFRLEGNAVLYGG 301 Query: 322 WSFAFRLRSSSGLQVLNVHFGGERIAYEVSVQEAVALYGGHTPAGMQTKYLDVGWGLGSV 381 WSFAFRLRSSSGLQVLNVHFGGERIAYEVSVQEAVALYGGHTPAGMQTKYLDVGWGLGSV Sbjct: 302 WSFAFRLRSSSGLQVLNVHFGGERIAYEVSVQEAVALYGGHTPAGMQTKYLDVGWGLGSV 361 Query: 382 THELAPGIDCPETATFLDTFHYYDADDPVHYPRALCLFEMPTGVPLRRHFNSNFKGGFNF 441 THELAPGIDCPETATFLDTFHYYDADDPVHYPRALCLFEMPTGVPLRRHFNSNFKGGFNF Sbjct: 362 THELAPGIDCPETATFLDTFHYYDADDPVHYPRALCLFEMPTGVPLRRHFNSNFKGGFNF 421 Query: 442 YAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYVHATFYTPEGLRHGTRL 501 YAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYVHATFYTPEGLRHGTRL Sbjct: 422 YAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYVHATFYTPEGLRHGTRL 481 Query: 502 HTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTLEQTQYSW 561 HTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTLEQTQYSW Sbjct: 482 HTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTLEQTQYSW 541 Query: 562 ERQAAFRFKRKLPKYLLFTSPQENPWGHKRTYRLQIHSMADQVLPPGWQEEQAITWARYP 621 ERQAAFRFKRKLPKYLLFTSPQENPWGHKR+YRLQIHSMADQVLPPGWQEEQAITWARYP Sbjct: 542 ERQAAFRFKRKLPKYLLFTSPQENPWGHKRSYRLQIHSMADQVLPPGWQEEQAITWARYP 601 Query: 622 LAVTKYRESELCSSSIYHQNDPWHPPVVFEQFLHNNENIENEDLVAWVTVGFLHIPHSED 681 LAVTKYRESELCSSSIYHQNDPW PPVVFEQFLHNNENIENEDLVAWVTVGFLHIPHSED Sbjct: 602 LAVTKYRESELCSSSIYHQNDPWDPPVVFEQFLHNNENIENEDLVAWVTVGFLHIPHSED 661 Query: 682 IPNTATPGNSVGFLLRPFNFFPEDPSLASRDTVIVWPRDNGPNYVQRWIPEDRDCSMPPP 741 IPNTATPGNSVGFLLRPFNFFPEDPSLASRDTVIVWPRDNGPNYVQRWIPEDRDCSMPPP Sbjct: 662 IPNTATPGNSVGFLLRPFNFFPEDPSLASRDTVIVWPRDNGPNYVQRWIPEDRDCSMPPP 721 Query: 742 FSYNGTYRPV 751 FSYNGTYRPV Sbjct: 722 FSYNGTYRPV 731 >2PNC-A nrPDB Length = 746 Score = 540 bits (1390), Expect = e-153, Method: Compositional matrix adjust. Identities = 296/700 (42%), Positives = 410/700 (58%), Gaps = 34/700 (4%) Query: 23 PGTLPRKAGVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKNTVFLIEMLLPKKYHV 82 P T P ++ +F+DLS +EL V SFL + L ++ + N VF +E+ LP K Sbjct: 33 PWTHPDQSQLFADLSREELTTVMSFLTQQLGPDLVDAAQARPSDNCVFSVELQLPPKAAA 92 Query: 83 LRFLDKGERHPVREARAVIFFGDQEHPNVTEFAVGPLPGPCYMRALS-PRPGYQSSWASR 141 L LD+G P REA A++FFG Q PNVTE VGPLP P YMR ++ R G + R Sbjct: 93 LAHLDRGSPPPAREALAIVFFGGQPQPNVTELVVGPLPQPSYMRDVTVERHGGPLPYYRR 152 Query: 142 PISTAEY-----ALLYHTLQEATKPLHQFFLNTTGFSFQDCHDRCLAFTDVAPRGVASGQ 196 P+ EY + L +A LH S++ + L + APRGV SG Sbjct: 153 PVLLREYLDIDQMIFNRELPQAAGVLHHCC------SYKQGGQKLLTM-NSAPRGVQSGD 205 Query: 197 RRSWLIIQRYVE--GYFLHPTGLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYA 254 R +W I + G +LHP GLELLVDH + D W V++V++ G++Y + +L ++ Sbjct: 206 RSTWFGIYYNITKGGPYLHPVGLELLVDHKALDPADWTVQKVFFQGRYYENLAQLEEQFE 265 Query: 255 DGEVDVVVLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQPHGPRFRLEG 314 G+V+VVV+ D GG ++ PP P+P P P GPRF ++G Sbjct: 266 AGQVNVVVIPDDGTGGFWSLKSQVPP----------GPTP-----PLQFHPQGPRFSVQG 310 Query: 315 NAVLYGGWSFAFRLRSSSGLQVLNVHFGGERIAYEVSVQEAVALYGGHTPAGMQTKYLDV 374 N V W+F+F L + SG +V +V F GER+AYE+S+QEA A+YGG+TPA M T+Y+D Sbjct: 311 NRVASSLWTFSFGLGAFSGPRVFDVRFQGERLAYEISLQEAGAVYGGNTPAAMLTRYMDS 370 Query: 375 GWGLGSVTHELAPGIDCPETATFLDTFHYYDADDPVHYPRALCLFEMPTGVPLRRHFNSN 434 G+G+G L G+DCP AT++D ++ P A C+FE G+PLRRH +S+ Sbjct: 371 GFGMGYFATPLIRGVDCPYLATYMDWHFVVESQTPKTLHDAFCVFEQNKGLPLRRH-HSD 429 Query: 435 FKGGFNFYAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYVHATFYTPEG 494 F +++ G+ VLV R+ ST+ NYDY+WD +FYPNG +E K+HATGY+ + F Sbjct: 430 FLS--HYFGGVAQTVLVFRSVSTMLNYDYVWDMVFYPNGAIEVKLHATGYISSAFLFGAA 487 Query: 495 LRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTL 554 R+G ++ H +G +HTH HY+VDLDV G +N M PWSP H++ + + Sbjct: 488 RRYGNQVGEHTLGPVHTHSAHYKVDLDVGGLENWVWAEDMAFVPTAIPWSPEHQIQRLQV 547 Query: 555 EQTQYSWERQAAFRFKRKLPKYLLFTSPQENPWGHKRTYRLQIHSMADQVLPPGWQEEQA 614 + Q E QAAF P+YL S Q N WGH R YR+Q S A +P E+A Sbjct: 548 TRKQLETEEQAAFPLGGASPRYLYLASKQSNKWGHPRGYRIQTVSFAGGPMPQNSPMERA 607 Query: 615 ITWARYPLAVTKYRESELCSSSIYHQNDPWHPPVVFEQFLHNNENIENEDLVAWVTVGFL 674 +W RY LA+T+ +E+E SSS+++QNDPW P V F F+ NNE I +DLVAWVT GFL Sbjct: 608 FSWGRYQLAITQRKETEPSSSSVFNQNDPWTPTVDFSDFI-NNETIAGKDLVAWVTAGFL 666 Query: 675 HIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSLASRDTV 714 HIPH+EDIPNT T GN VGF LRP+NFF ++PS+ S D++ Sbjct: 667 HIPHAEDIPNTVTVGNGVGFFLRPYNFFDQEPSMDSADSI 706 >1US1-A nrPDB Length = 763 Score = 514 bits (1323), Expect = e-146, Method: Compositional matrix adjust. Identities = 291/738 (39%), Positives = 415/738 (56%), Gaps = 42/738 (5%) Query: 23 PGTLPRKAGVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKNTVFLIEMLLPKKYHV 82 P T P ++ +F+DLS +EL AV FL + L ++ + N VF +E+ LP K Sbjct: 50 PWTHPGQSQLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAA 109 Query: 83 LRFLDKGERHPVREARAVIFFGDQEHPNVTEFAVGPLPGPCYMRALS-PRPGYQSSWASR 141 L LD+G P REA A++FFG Q PNV+E VGPLP P YMR ++ R G + R Sbjct: 110 LAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRR 169 Query: 142 PISTAEY-----ALLYHTLQEATKPLHQFFLNTTGFSFQDCHDRCLAFTDVAPRGVASGQ 196 P+ EY + L +A+ LH F R L APRG+ SG Sbjct: 170 PVLFQEYLDIDQMIFNRELPQASGLLHHC-------CFYKHRGRNLVTMTTAPRGLQSGD 222 Query: 197 RRSWLIIQRYVEG--YFLHPTGLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYA 254 R +W + + G +FLH GLELLV+H + D W +++V+Y G++Y S +L ++ Sbjct: 223 RATWFGLYYNISGAGFFLHHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFE 282 Query: 255 DGEVDVVVLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQ--PHGPRFRL 312 G V+VV++ D GG SP+ +Q P GPRF + Sbjct: 283 AGLVNVVLIPDNGTGGSW-----------------SLKSPVPPGPAPPLQFYPQGPRFSV 325 Query: 313 EGNAVLYGGWSFAFRLRSSSGLQVLNVHFGGERIAYEVSVQEAVALYGGHTPAGMQTKYL 372 +G+ V W+F+F L + SG ++ +V F GER+ YE+S+QEA+A+YGG++PA M T+Y+ Sbjct: 326 QGSRVASSLWTFSFGLGAFSGPRIFDVRFQGERLVYEISLQEALAIYGGNSPAAMTTRYV 385 Query: 373 DVGWGLGSVTHELAPGIDCPETATFLDTFHYYDADDPVHYPRALCLFEMPTGVPLRRHFN 432 D G+G+G T L G+DCP AT++D ++ P A C+FE G+PLRRH + Sbjct: 386 DGGFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQAPKTIRDAFCVFEQNQGLPLRRHHS 445 Query: 433 SNFKGGFNFYAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYVHATFYTP 492 + +++ GL VLV+R+ ST+ NYDY+WD +F+P+G +E + +ATGY+ + F Sbjct: 446 DLYS---HYFGGLAETVLVVRSMSTLLNYDYVWDTVFHPSGAIEIRFYATGYISSAFLFG 502 Query: 493 EGLRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQP 552 ++G ++ H +G +HTH H++VDLDVAG +N M + PWSP H++ + Sbjct: 503 ATGKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEHQLQRL 562 Query: 553 TLEQTQYSWERQAAFRFKRKLPKYLLFTSPQENPWGHKRTYRLQIHSMADQVLPPGWQEE 612 + + E QAAF P+YL S N WGH R YR+Q+ S A + LP Sbjct: 563 QVTRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHPRGYRIQMLSFAGEPLPQNSSMA 622 Query: 613 QAITWARYPLAVTKYRESELCSSSIYHQNDPWHPPVVFEQFLHNNENIENEDLVAWVTVG 672 + +W RY LAVT+ +E E SSS+++QNDPW P V F F+ NNE I +DLVAWVT G Sbjct: 623 RGFSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDFSDFI-NNETIAGKDLVAWVTAG 681 Query: 673 FLHIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSLASRDTVIV-WPRDNGPNYVQ--RW 729 FLHIPH+EDIPNT T GN VGF LRP+NFF EDPS S D++ +D G V Sbjct: 682 FLHIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSADSIYFRGDQDAGACEVNPLAC 741 Query: 730 IPEDRDCSMP-PPFSYNG 746 +P+ C+ P FS+ G Sbjct: 742 LPQAAACAPDLPAFSHGG 759 >1RKY-A nrPDB Length = 747 Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 214/712 (30%), Positives = 321/712 (45%), Gaps = 64/712 (8%) Query: 29 KAGVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKNTVFLIEMLLPKKYHVLRFLDK 88 K +++ L+ +E++ V L S + + N V IE L P K L +LD+ Sbjct: 17 KTNIWTSLAKEEVQEVLDLLHST--YNITEVTKADFFSNYVLWIETLKPNKTEALTYLDE 74 Query: 89 GERHPVREARAVIFFGDQEHPNVTEFAVGPLPGPCYMRALSPRPGYQSSWAS-------- 140 P R AR V++FG+ E E VGPLP + P Y ++ S Sbjct: 75 DGDLPPRNARTVVYFGEGEEGYFEELKVGPLP-VSDETTIEPLSFYNTNGKSKLPFEVGH 133 Query: 141 --RPISTAEYALLYHTLQEATKPLHQFFLNTTGFSFQD--CHDRCLAFTDVAPRGVASGQ 196 R S A+ + L L T + G ++D CH D A G Sbjct: 134 LDRIKSAAKSSFLNKNLN--TTIMRDVLEGLIGVPYEDMGCHSAAPQLHDPAT-GATVDY 190 Query: 197 RRSWLIIQRYVEGYFLHPTGLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYADG 256 + + E L PTG D D W + + YN K Y S EEL A Sbjct: 191 GTCNINTENDAEN--LVPTGFFFKFDMTGRDVSQWKMLEYIYNNKVYTSAEELYE--AMQ 246 Query: 257 EVDVVVLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVS---GPRLVQPHGPRFRLE 313 + D V L P D T R D H+ PRLV+P G R+ + Sbjct: 247 KDDFVTL--PKIDVDNLDWTV--------IQRNDSAPVRHLDDRKSPRLVEPEGRRWAYD 296 Query: 314 GNAVLYG--GWSFAFRLRSSSGLQVLNVHFGGERIAYEVSVQEAVALYGGHTPAGMQTKY 371 G+ + W F +G+ ++ F GERI YE+S+QE +A YG P T Y Sbjct: 297 GDEEYFSWMDWGFYTSWSRDTGISFYDITFKGERIVYELSLQELIAEYGSDDPFNQHTFY 356 Query: 372 LDVGWGLGSVTHELAPGIDCPETATFL--DTFHYYDADDPVHYPRALCLFEMPTGVPLRR 429 D+ +G+G+ L PG DCP TA + DTF Y D+ + + C+FE L R Sbjct: 357 SDISYGVGN-RFSLVPGYDCPSTAGYFTTDTFEY---DEFYNRTLSYCVFENQEDYSLLR 412 Query: 430 HFNSNFKGGFNFYAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYVHATF 489 H G ++ A + L +R ST+ NYDY + + F+ +G +E + A GY+ A + Sbjct: 413 H------TGASYSAITQNPTLNVRFISTIGNYDYNFLYKFFLDGTLEVSVRAAGYIQAGY 466 Query: 490 YTPE-GLRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHR 548 + PE +G ++H L G+ H H+++Y+VDLDV GTKN MK ++ PW+P Sbjct: 467 WNPETSAPYGLKIHDVLSGSFHDHVLNYKVDLDVGGTKNRASQYVMKDVDVEYPWAPGTV 526 Query: 549 VVQPTLEQTQYSWERQAAFRFKRKLPKYLLFTSPQE-NPWGHKRTYRLQ-----IHSMAD 602 + + + E + LL S +E N +G+ R Y + +H Sbjct: 527 YNTKQIAREVFENEDFNGINWPENGQGILLIESAEETNSFGNPRAYNIMPGGGGVH---- 582 Query: 603 QVLPPGWQEEQAITWARYPLAVTKYRESELCSSSIYHQNDPWHPPVVFEQFLHNNENIEN 662 +++ + WAR L +TK++++EL SS+ + N + PPV F FL ++E+++ Sbjct: 583 RIVKNSRSGPETQNWARSNLFLTKHKDTELRSSTALNTNALYDPPVNFNAFL-DDESLDG 641 Query: 663 EDLVAWVTVGFLHIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSLASRDTV 714 ED+VAWV +G H+P+S D+PNT F+L PFN+F S SRDT Sbjct: 642 EDIVAWVNLGLHHLPNSNDLPNTIFSTAHASFMLTPFNYF---DSENSRDTT 690 >3PGB-A nrPDB Length = 797 Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 187/720 (25%), Positives = 301/720 (41%), Gaps = 32/720 (4%) Query: 29 KAGVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKNTVFLIEMLLPKKYHVLRFLDK 88 K V+ L++ E V +L+ + EL L + NT+ LIE+ P K + +LD Sbjct: 64 KENVWYGLTDDETADVAKWLFGRPELNLTTTENAGEWDNTIALIELHRPNKSEAIPYLDG 123 Query: 89 GERHPVREARAVIFFGDQEHPNVTEFAVGPLP--GPCYMRALSPRPGYQSSWASRPISTA 146 P R A + P + VGPLP L ++ R + Sbjct: 124 SGPAPTRHAHVRLNNRATTDPYFADILVGPLPVSNATTWEPLEFPYTRKTQGQVRNVEPD 183 Query: 147 EYALLYHTLQEATKPLHQFFLNTTGFSFQDCHDRCLAFTDVAPRGVASGQRRSWLIIQRY 206 + L + + + L+ + + L + P G+ W + Sbjct: 184 GETVYSEWLFKISASIADITLDLWNGTALGLENDTLDIWGIDPLWQDDGRIIRWDMFWNM 243 Query: 207 VEGYF----LHPTGLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYADGEVDVVV 262 + F L P GL L D D W + YN FY + EE + Y V Sbjct: 244 ADDEFDSETLLPLGLYLKSDVTGRDPSQWKLLGWMYNDIFYETTEEFRKAY--WSPGFVK 301 Query: 263 LEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQPHGPRFRL--EGNAVLYG 320 L+ + G H TE+ RG P P ++ P G R+ + E V + Sbjct: 302 LKPNVDGAWAH--TEQ---------RGPVPPQDRKQPPVMIAPDGARYSVDAERKYVTWM 350 Query: 321 GWSFAFRLRSSSGLQVLNVHFGGERIAYEVSVQEAVALYGGHTPAGMQTKYLDVGWGLGS 380 +SF +GL + ++ + G+R+ YE+ +QEA+A Y + P YLD +G G Sbjct: 351 DFSFYIAFNRDTGLSLFDIKYKGQRVLYELGLQEALAHYAANDPVQSSVAYLDSYYGFGP 410 Query: 381 VTHELAPGIDCPETATFLDTFHYYDADDPVHYPRALCLFEMPTGVPLRRHFNSNFKGGFN 440 EL G DCP A++L+T Y D + H +LCLFE P+ RH S Sbjct: 411 YAFELLKGYDCPSYASYLNTSFYKDEETHTHV-DSLCLFEFDADYPMARHSTS------E 463 Query: 441 FYAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYVHATFYTPEGLRHGTR 500 F + K LR+ ST+ NYDY++ + F+ +G + ++ A+GY+ + +Y G + Sbjct: 464 FVSVTKNVYFTLRSVSTIGNYDYMFSYNFHMDGTIGVEVRASGYIQSAYYA-NNQDFGYQ 522 Query: 501 LHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTLEQTQYS 560 +H L G++H H+++++ D D+ G N+ + + + WS L ++ Sbjct: 523 IHDSLSGSMHDHVLNFKADFDILGPNNTIELVSVVPVTKQFSWSGNKTRNTMQLGRSFIH 582 Query: 561 WERQAAFRFKRKLPKYL-LFTSPQENPWGHKRTYR-LQIHSMADQVLPPGWQEEQAITWA 618 E +A + L + + N +G R YR L A + A WA Sbjct: 583 SEDEARLNWGFNGQTQLHVVNQDKPNKFGEPRGYRILPSAGTAHLTVLNSSNLVHAAHWA 642 Query: 619 RYPLAVTKYRESELCSSSIYHQNDPWHPPVVFEQFLHNNENIENEDLVAWVTVGFLHIPH 678 Y + VT+ + E S+ Y+ D +PPV F F N E++ DLV W+ +G H+PH Sbjct: 643 EYDVQVTRQHDFEPTSAHPYNSQDIHNPPVDFSTFF-NGESLNQTDLVVWLNLGMHHVPH 701 Query: 679 SEDIPNTATPGNSVGFLLRPFNFFPEDPSLASRDTVIVWPRDNGPNYVQRWIPEDRDCSM 738 + D+PNT G P N+ P DPS + + V V D V+ + + CS+ Sbjct: 702 TGDLPNTVFTTAHSGVAFTPLNYLPGDPSRETVNMVRVDYSDGAATAVRTFGQSNETCSV 761 >3LOY-A nrPDB Length = 633 Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 118/461 (25%), Positives = 203/461 (44%), Gaps = 31/461 (6%) Query: 262 VLEDPLPGGKGHDSTE-----EPPLFSSHKP-RGDFPSPIHVSGPRLVQ-PHGPRFRLEG 314 V D LPGG TE E P H G+ P+ P +VQ P GP F ++G Sbjct: 186 VRMDYLPGGADETVTETQAWDEFPFVEYHPDLNGETIVPLK---PLIVQQPEGPSFNVDG 242 Query: 315 NAVLYGGWSFAFRLRSSSGLQVLNVHFGGERIAYEVSVQEAVALYGGHTPAGMQTKYLDV 374 + + + GW F G + ++HF G + Y +S+ E YG + + D+ Sbjct: 243 HKISWQGWEFFVIPTVREGFAIYDIHFKGRSVVYRLSLSEMTVPYGDPRAPFHRKQAFDL 302 Query: 375 G-WGLGSVTHELAPGIDCPETATFLDTFHYYDADDPVHYPRALCLFEMPTGVPLRRHFNS 433 G G G+ + LA G DC ++D D V P +CL E G+ L +H + Sbjct: 303 GDCGFGATGNSLALGCDCLGVIKYMDCRRVNTNGDSVLIPNTVCLHEQDGGL-LYKH--T 359 Query: 434 NFKGGFNFYAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYVHATFYTPE 493 N++ A + + V++T +TV NY+Y+ + IF G + + ATG + + Sbjct: 360 NYRTNVPVIA--RRREFVVQTIATVANYEYMLNIIFDQAGEIRIHVRATGILSTMPLDKD 417 Query: 494 -GLRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSF---QTLQMKLENITNPWSPRHRV 549 + GT + ++ H H++ +R+D V G +N+ ++M+ NP++ Sbjct: 418 VTVPWGTNVGPRVMAAYHQHMLSFRIDPAVDGYENTVVFDDVIRMEKNTKLNPYNVGFVT 477 Query: 550 VQPTLEQTQYSWERQAAFRFKRKLPKYLLFTSPQENPWGHK-RTYRLQIHSMADQVLPPG 608 + +E+ Y Q+ F + Y + + NP K Y++ + + + Sbjct: 478 ERTVVEKPGYV--EQSPFTNR----SYKIINENKINPISKKPVAYKIMMPARQMLLADED 531 Query: 609 WQEEQAITWARYPLAVTKYRESELCSSSIYHQNDPWHPPVVFEQFLHNNENIENEDLVAW 668 + +A + VTKYR++EL ++ + + +EN+ N++ V W Sbjct: 532 SYNNKRAQFATQQVWVTKYRDNELYAAGEFTNQS--QTDTGLGVWARRDENVRNDNPVVW 589 Query: 669 VTVGFLHIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSLA 709 T+GF HIP ED P P + L PF FF ++P+L+ Sbjct: 590 ATLGFTHIPRVEDFP--VMPVEAHEIALVPFGFFDKNPALS 628 >1D6Z-A nrPDB Length = 727 Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 124/431 (28%), Positives = 198/431 (45%), Gaps = 36/431 (8%) Query: 301 RLVQPHGPRFRLEGNAVLYGGWSFAFRLRSSSGLQVLNVHFGGE----RIAYEVSVQEAV 356 ++++P G + + G+ + + W F + S G + V + ++ YE S+ + Sbjct: 307 QIIEPEGKNYTITGDMIHWRNWDFHLSMNSRVGPMISTVTYNDNGTKRKVMYEGSLGGMI 366 Query: 357 ALYGGHTPAGMQTKYLDVG-WGLGSVTHELAPGIDCPETATFLDTFHYYDADDPVHYPRA 415 YG YLD G +G+G++T +A G D P A L+ P+ PRA Sbjct: 367 VPYGDPDIGWYFKAYLDSGDYGMGTLTSPIARGKDAPSNAVLLNETIADYTGVPMEIPRA 426 Query: 416 LCLFEMPTGVPLRRHFNSNFKGGFNFYAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVM 475 + +FE G P +H G N + + LV+R STV NYDYI+D+IF+ NG + Sbjct: 427 IAVFERYAG-PEYKH---QEMGQPN--VSTERRELVVRWISTVGNYDYIFDWIFHENGTI 480 Query: 476 EAKMHATGY-----VHATFYTPE----GLRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTK 526 ATG V A E R+GT + +++G H H+ ++R+DLDV G Sbjct: 481 GIDAGATGIEAVKGVKAKTMHDETAKDDTRYGTLIDHNIVGTTHQHIYNFRLDLDVDGEN 540 Query: 527 NSFQTLQMKLENITNPWSPRHRVVQPTLEQTQYSWERQAAFRFKRKLPKYLLFTSPQENP 586 NS + ++ T PR +Q + Q E+ AA +F + LL +EN Sbjct: 541 NSLVAMDPVVKPNT-AGGPRTSTMQ--VNQYNIGNEQDAAQKFDPGTIR-LLSNPNKENR 596 Query: 587 WGHKRTYRL-----QIHSMAD--QVLPPGWQEEQAITWARYPLAVTKYRESELCSSSIYH 639 G+ +Y++ H +A Q P W + +++ L VT+Y E Y Sbjct: 597 MGNPVSYQIIPYAGGTHPVAKGAQFAPDEWIYHR-LSFMDKQLWVTRYHPGERFPEGKY- 654 Query: 640 QNDPWHPPVVFEQFLHNNENIENEDLVAWVTVGFLHIPHSEDIPNTATPGNSVGFLLRPF 699 N H Q+ +NE+++N D V W+T G H+ +E+ P P V LL+P+ Sbjct: 655 PNRSTH-DTGLGQYSKDNESLDNTDAVVWMTTGTTHVARAEEWP--IMPTEWVHTLLKPW 711 Query: 700 NFFPEDPSLAS 710 NFF E P+L + Sbjct: 712 NFFDETPTLGA 722 >1KSI-A nrPDB Length = 642 Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 115/432 (26%), Positives = 183/432 (42%), Gaps = 28/432 (6%) Query: 304 QPHGPRFRLEGNAVLYGGWSF--AFRLRSSSGLQVLNVH----FGGERIAYEVSVQEAVA 357 QP GP F++ G++V + W F F +R+ + + +++ R+ Y+ + E Sbjct: 220 QPQGPGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFV 279 Query: 358 LYGGHTPAGMQTKYLDVG-WGLGSVTHELAPGIDCPETATFLDTFHYYDADDPVHYPRAL 416 Y T + D G +G G T L P DCP A F+DT+ + P+ A+ Sbjct: 280 PYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAI 339 Query: 417 CLFEMPTGVPLRRHFNSNFKGGFNFYAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVME 476 C+FE G + RH + + L++RT TV NYD + D+ F +G ++ Sbjct: 340 CVFEQ-YGNIMWRHTENGIPNE-SIEESRTEVNLIVRTIVTVGNYDNVIDWEFKASGSIK 397 Query: 477 AKMHATGYVH---ATFYTPEGLR---HGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQ 530 + +G + + ++ HG + + IG H H Y +D D+ GT NSF+ Sbjct: 398 PSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFE 457 Query: 531 TLQMKLENITNPWSPRHRVVQPTLEQTQYSWERQAAFRFKRKLPKYLLFTSPQ-ENPWGH 589 +K I + S R T E E A P L+ +P + G+ Sbjct: 458 KTSLKTVRIKDGSSKRKSYW--TTETQTAKTESDAKITIGLA-PAELVVVNPNIKTAVGN 514 Query: 590 KRTYRLQIHSMADQVLPPGWQEEQAITWARYPLAVTKYRESELCSSSIYHQNDPWHPPVV 649 + YRL A +L + + Y + VT Y +E + +Y + + Sbjct: 515 EVGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLA 574 Query: 650 FEQFLHNNENIENEDLVAWVTVGFLHIPHSEDIPNTATPGNSVGFLLRPFNFFPEDP--- 706 + N I N+D+V W VG H+P ED P P S F LRP NFF +P Sbjct: 575 V--WTKQNREIVNKDIVMWHVVGIHHVPAQEDFP--IMPLLSTSFELRPTNFFERNPVLK 630 Query: 707 SLASRDTVIVWP 718 +L+ RD + WP Sbjct: 631 TLSPRD--VAWP 640 >2CG0-A nrPDB Length = 646 Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 113/461 (24%), Positives = 191/461 (41%), Gaps = 37/461 (8%) Query: 258 VDVVVLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQPHGPRFRLEG-NA 316 +D V P G D PL ++ KP + QP GP F + G N Sbjct: 188 IDTGVFPVPAEHGNYTDPELTGPLRTTQKPIS------------ITQPEGPSFTVTGGNH 235 Query: 317 VLYGGWSFAFRLRSSSGLQVLNVHF-GGER---IAYEVSVQEAVALYGGHTPAGMQTKYL 372 + + WS G+ + N+ F G+R I S+ E V YG +P Y Sbjct: 236 IEWEKWSLDVGFDVREGVVLHNIAFRDGDRLRPIINRASIAEMVVPYGDPSPIRSWQNYF 295 Query: 373 DVG-WGLGSVTHELAPGIDCPETATFLDTFHYYDADDPVHYPRALCLFEMPTGVPLRRHF 431 D G + +G + L G DC T+L +P +C+ E G+ L +H Sbjct: 296 DTGEYLVGQYANSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEEDWGI-LAKH- 353 Query: 432 NSNFKGGFNFYAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYVHATFYT 491 S+ G N+ + + +V+ +T+ NYDY + + Y +G +E + ATG V + + Sbjct: 354 -SDLWSGINYTR--RNRRMVISFFTTIGNYDYGFYWYLYLDGTIEFEAKATGVVFTSAFP 410 Query: 492 PEGLRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQ 551 G + ++L L H H+ R+D+ + G N + + + P + R Sbjct: 411 EGGSDNISQLAPGLGAPFHQHIFSARLDMAIDGFTNRVEEEDV-VRQTMGPGNERGNAF- 468 Query: 552 PTLEQTQYSWERQAAFRFKRKLPKYLLFTSPQ-ENPWGHKRTYRLQIHSMADQVLPPGWQ 610 + ++T + E +A + + + ++P+ +N Y+L H+ + PG Sbjct: 469 -SRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADPGSS 527 Query: 611 EEQAITWARYPLAVTKYRESELCSSSIY---HQNDPWHPPVVFEQFLHNNENIENEDLVA 667 + +A L VT+Y + E + + H P ++ + +I+ +D+V Sbjct: 528 IARRAAFATKDLWVTRYADDERYPTGDFVNQHSGGAGLP-----SYIAQDRDIDGQDIVV 582 Query: 668 WVTVGFLHIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSL 708 W T G H P ED P P ++VGF LRP FF P L Sbjct: 583 WHTFGLTHFPRVEDWP--IMPVDTVGFKLRPEGFFDRSPVL 621 >3NBJ-A nrPDB Length = 692 Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 103/423 (24%), Positives = 183/423 (43%), Gaps = 27/423 (6%) Query: 302 LVQPHGPRFRLEGNAVLYGGWSFAFRLRSSSGLQVLNVHF---GGER-IAYEVSVQEAVA 357 + QP G F++ GN + + + F G+ + +V + G R I + +S+ E + Sbjct: 244 VTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIV 303 Query: 358 LYGGHTPAGMQTKYLDVG-WGLGSVTHELAPGIDCPETATFLDTFHYYDADDPVHYPRAL 416 +G + LD+G +G G +T+ L+ G DC +LD A DP+ A+ Sbjct: 304 PFGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAV 363 Query: 417 CLFEMPTGVPLRRHFNSNFKGGFNFYAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVME 476 C+ E G+ L +H S+F+ F + LV+ T N +Y ++F +G + Sbjct: 364 CIHEEDDGL-LFKH--SDFRDNFATSLVTRATKLVVSQIFTAANXEYCLYWVFMQDGAIR 420 Query: 477 AKMHATGYVHATFY--TPEGLRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQM 534 + TG ++ E GTR++ ++ + H HL R+D + G NS Sbjct: 421 LDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDA 480 Query: 535 KLENITNPW---SPRHRVVQPTL-EQTQYSWERQAAFRFKRKLPK-YLLFTSPQENPW-G 588 K ++P+ SP + E+T + + + ++ + + +F + NP+ G Sbjct: 481 K----SSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSG 536 Query: 589 HKRTYRLQIHSMADQVLPPGWQEEQAITWARYPLAVTKYRESELCSSSIYHQNDPWHPPV 648 +Y+L + G + WA + + V Y+++ L S + W Sbjct: 537 KPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQ--WSGDG 594 Query: 649 V---FEQFLHNNENIENEDLVAWVTVGFLHIPHSEDIPNTATPGNSVGFLLRPFNFFPED 705 V E +ENI+N D++ + T G H P ED P P + +LRP +FF E+ Sbjct: 595 VRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFP--LXPAEPITLMLRPRHFFTEN 652 Query: 706 PSL 708 P L Sbjct: 653 PGL 655 >2P3E-A nrPDB Length = 420 Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 8/63 (12%) Query: 322 WSFAFRLRSSSGLQVLNVH--FGGERIA---YEVSVQEAVALYGGHTPAGMQTKYLDVGW 376 + +A +L + L+++ +H G + + Y +V++ V+LY T G KYLD+G Sbjct: 187 YEYASKLEN---LEIVGIHCHIGSQILDISPYREAVEKVVSLYESLTQKGFDIKYLDIGG 243 Query: 377 GLG 379 GLG Sbjct: 244 GLG 246 >3IHG-A nrPDB Length = 535 Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%) Query: 308 PRFRLEGNAVLYGG----WSFAFRLRSSSGLQVLNVHFGGERIAYEVSVQEAVALY 359 P + GNA + G W A L+ +G +L+ + ++A E+ V EA+A+Y Sbjct: 315 PTGGMSGNAAVADGFDLAWKLAAVLQGQAGAGLLDTYEDERKVAAELVVAEALAIY 370 >6GVK-A nrPDB Length = 214 Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Query: 67 NTVFLIEMLLPKKYHVLRFLDKGERHPVREARAVIFFGDQEHPNVTEFAVGPLPGPCYMR 126 T ++E LLP +V R + + RE VI Q HP + + PLPG + Sbjct: 60 QTSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQVHP---QSPLCPLPGSAFTL 116 Query: 127 ALSPRPG 133 + PG Sbjct: 117 STPSAPG 123 >1WDI-A nrPDB Length = 345 Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust. Identities = 14/31 (45%), Positives = 19/31 (61%) Query: 116 VGPLPGPCYMRALSPRPGYQSSWASRPISTA 146 VG +P P Y++A P YQ+ +A RP S A Sbjct: 151 VGEVPLPPYIKAKIPMERYQTVYARRPGSVA 181 >3VQT-A nrPDB Length = 548 Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 84 RFLDKGERHPVREARAVIFFGDQEHPNV-TEFAVGPLPGPCYMRALSP 130 R+L KGE PV A+ FG +E ++ EFA GP P P R + P Sbjct: 262 RYL-KGELTPVFFGSAINNFGVREMLDMFVEFAPGPQPRPAATRVVEP 308 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3K5T-A nrPDB 1074 0.0 1US1-A nrPDB 919 0.0 2PNC-A nrPDB 903 0.0 3PGB-A nrPDB 811 0.0 1RKY-A nrPDB 701 0.0 3LOY-A nrPDB 488 e-138 2CG0-A nrPDB 487 e-138 3NBJ-A nrPDB 471 e-133 1KSI-A nrPDB 465 e-131 1D6Z-A nrPDB 456 e-128 Sequences not found previously or not previously below threshold: 3ZIU-A nrPDB 33 0.56 3IHG-A nrPDB 32 0.97 4NZF-A nrPDB 32 1.3 4L6X-A nrPDB 32 1.3 1T0O-A nrPDB 31 1.7 1L1Y-A nrPDB 31 2.2 4KC7-A nrPDB 29 6.4 3NTT-A nrPDB 29 7.3 CONVERGED! >3K5T-A nrPDB Length = 731 Score = 1074 bits (2777), Expect = 0.0, Method: Composition-based stats. Identities = 728/730 (99%), Positives = 729/730 (99%) Query: 22 SPGTLPRKAGVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKNTVFLIEMLLPKKYH 81 SPGTLPRKAGVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKNTVFLIEMLLPKKYH Sbjct: 2 SPGTLPRKAGVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKNTVFLIEMLLPKKYH 61 Query: 82 VLRFLDKGERHPVREARAVIFFGDQEHPNVTEFAVGPLPGPCYMRALSPRPGYQSSWASR 141 VLRFLDKGERHPVREARAVIFFGDQEHPNVTEFAVGPLPGPCYMRALSPRPGYQSSWASR Sbjct: 62 VLRFLDKGERHPVREARAVIFFGDQEHPNVTEFAVGPLPGPCYMRALSPRPGYQSSWASR 121 Query: 142 PISTAEYALLYHTLQEATKPLHQFFLNTTGFSFQDCHDRCLAFTDVAPRGVASGQRRSWL 201 PISTAEYALLYHTLQEATKPLHQFFLNTTGFSFQDCHDRCLAFTDVAPRGVASGQRRSWL Sbjct: 122 PISTAEYALLYHTLQEATKPLHQFFLNTTGFSFQDCHDRCLAFTDVAPRGVASGQRRSWL 181 Query: 202 IIQRYVEGYFLHPTGLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYADGEVDVV 261 IIQRYVEGYFLHPTGLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYADGEVDVV Sbjct: 182 IIQRYVEGYFLHPTGLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYADGEVDVV 241 Query: 262 VLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQPHGPRFRLEGNAVLYGG 321 VLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQPHGPRFRLEGNAVLYGG Sbjct: 242 VLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQPHGPRFRLEGNAVLYGG 301 Query: 322 WSFAFRLRSSSGLQVLNVHFGGERIAYEVSVQEAVALYGGHTPAGMQTKYLDVGWGLGSV 381 WSFAFRLRSSSGLQVLNVHFGGERIAYEVSVQEAVALYGGHTPAGMQTKYLDVGWGLGSV Sbjct: 302 WSFAFRLRSSSGLQVLNVHFGGERIAYEVSVQEAVALYGGHTPAGMQTKYLDVGWGLGSV 361 Query: 382 THELAPGIDCPETATFLDTFHYYDADDPVHYPRALCLFEMPTGVPLRRHFNSNFKGGFNF 441 THELAPGIDCPETATFLDTFHYYDADDPVHYPRALCLFEMPTGVPLRRHFNSNFKGGFNF Sbjct: 362 THELAPGIDCPETATFLDTFHYYDADDPVHYPRALCLFEMPTGVPLRRHFNSNFKGGFNF 421 Query: 442 YAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYVHATFYTPEGLRHGTRL 501 YAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYVHATFYTPEGLRHGTRL Sbjct: 422 YAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYVHATFYTPEGLRHGTRL 481 Query: 502 HTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTLEQTQYSW 561 HTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTLEQTQYSW Sbjct: 482 HTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTLEQTQYSW 541 Query: 562 ERQAAFRFKRKLPKYLLFTSPQENPWGHKRTYRLQIHSMADQVLPPGWQEEQAITWARYP 621 ERQAAFRFKRKLPKYLLFTSPQENPWGHKR+YRLQIHSMADQVLPPGWQEEQAITWARYP Sbjct: 542 ERQAAFRFKRKLPKYLLFTSPQENPWGHKRSYRLQIHSMADQVLPPGWQEEQAITWARYP 601 Query: 622 LAVTKYRESELCSSSIYHQNDPWHPPVVFEQFLHNNENIENEDLVAWVTVGFLHIPHSED 681 LAVTKYRESELCSSSIYHQNDPW PPVVFEQFLHNNENIENEDLVAWVTVGFLHIPHSED Sbjct: 602 LAVTKYRESELCSSSIYHQNDPWDPPVVFEQFLHNNENIENEDLVAWVTVGFLHIPHSED 661 Query: 682 IPNTATPGNSVGFLLRPFNFFPEDPSLASRDTVIVWPRDNGPNYVQRWIPEDRDCSMPPP 741 IPNTATPGNSVGFLLRPFNFFPEDPSLASRDTVIVWPRDNGPNYVQRWIPEDRDCSMPPP Sbjct: 662 IPNTATPGNSVGFLLRPFNFFPEDPSLASRDTVIVWPRDNGPNYVQRWIPEDRDCSMPPP 721 Query: 742 FSYNGTYRPV 751 FSYNGTYRPV Sbjct: 722 FSYNGTYRPV 731 >1US1-A nrPDB Length = 763 Score = 919 bits (2374), Expect = 0.0, Method: Composition-based stats. Identities = 290/736 (39%), Positives = 414/736 (56%), Gaps = 38/736 (5%) Query: 23 PGTLPRKAGVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKNTVFLIEMLLPKKYHV 82 P T P ++ +F+DLS +EL AV FL + L ++ + N VF +E+ LP K Sbjct: 50 PWTHPGQSQLFADLSREELTAVMRFLTQRLGPGLVDAAQARPSDNCVFSVELQLPPKAAA 109 Query: 83 LRFLDKGERHPVREARAVIFFGDQEHPNVTEFAVGPLPGPCYMRALS-PRPGYQSSWASR 141 L LD+G P REA A++FFG Q PNV+E VGPLP P YMR ++ R G + R Sbjct: 110 LAHLDRGSPPPAREALAIVFFGRQPQPNVSELVVGPLPHPSYMRDVTVERHGGPLPYHRR 169 Query: 142 PISTAEY-----ALLYHTLQEATKPLHQFFLNTTGFSFQDCHDRCLAFTDVAPRGVASGQ 196 P+ EY + L +A+ LH F R L APRG+ SG Sbjct: 170 PVLFQEYLDIDQMIFNRELPQASGLLHHC-------CFYKHRGRNLVTMTTAPRGLQSGD 222 Query: 197 RRSWLIIQRYVEG--YFLHPTGLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYA 254 R +W + + G +FLH GLELLV+H + D W +++V+Y G++Y S +L ++ Sbjct: 223 RATWFGLYYNISGAGFFLHHVGLELLVNHKALDPARWTIQKVFYQGRYYDSLAQLEAQFE 282 Query: 255 DGEVDVVVLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQPHGPRFRLEG 314 G V+VV++ D GG + PP + P GPRF ++G Sbjct: 283 AGLVNVVLIPDNGTGGSWSLKSPVPPGPAPP---------------LQFYPQGPRFSVQG 327 Query: 315 NAVLYGGWSFAFRLRSSSGLQVLNVHFGGERIAYEVSVQEAVALYGGHTPAGMQTKYLDV 374 + V W+F+F L + SG ++ +V F GER+ YE+S+QEA+A+YGG++PA M T+Y+D Sbjct: 328 SRVASSLWTFSFGLGAFSGPRIFDVRFQGERLVYEISLQEALAIYGGNSPAAMTTRYVDG 387 Query: 375 GWGLGSVTHELAPGIDCPETATFLDTFHYYDADDPVHYPRALCLFEMPTGVPLRRHFNSN 434 G+G+G T L G+DCP AT++D ++ P A C+FE G+PLRRH + Sbjct: 388 GFGMGKYTTPLTRGVDCPYLATYVDWHFLLESQAPKTIRDAFCVFEQNQGLPLRRHHSDL 447 Query: 435 FKGGFNFYAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYVHATFYTPEG 494 + +++ GL VLV+R+ ST+ NYDY+WD +F+P+G +E + +ATGY+ + F Sbjct: 448 YS---HYFGGLAETVLVVRSMSTLLNYDYVWDTVFHPSGAIEIRFYATGYISSAFLFGAT 504 Query: 495 LRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTL 554 ++G ++ H +G +HTH H++VDLDVAG +N M + PWSP H++ + + Sbjct: 505 GKYGNQVSEHTLGTVHTHSAHFKVDLDVAGLENWVWAEDMVFVPMAVPWSPEHQLQRLQV 564 Query: 555 EQTQYSWERQAAFRFKRKLPKYLLFTSPQENPWGHKRTYRLQIHSMADQVLPPGWQEEQA 614 + E QAAF P+YL S N WGH R YR+Q+ S A + LP + Sbjct: 565 TRKLLEMEEQAAFLVGSATPRYLYLASNHSNKWGHPRGYRIQMLSFAGEPLPQNSSMARG 624 Query: 615 ITWARYPLAVTKYRESELCSSSIYHQNDPWHPPVVFEQFLHNNENIENEDLVAWVTVGFL 674 +W RY LAVT+ +E E SSS+++QNDPW P V F F+ NNE I +DLVAWVT GFL Sbjct: 625 FSWERYQLAVTQRKEEEPSSSSVFNQNDPWAPTVDFSDFI-NNETIAGKDLVAWVTAGFL 683 Query: 675 HIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSLASRDTVIV-WPRDNGPNYVQ--RWIP 731 HIPH+EDIPNT T GN VGF LRP+NFF EDPS S D++ +D G V +P Sbjct: 684 HIPHAEDIPNTVTVGNGVGFFLRPYNFFDEDPSFYSADSIYFRGDQDAGACEVNPLACLP 743 Query: 732 EDRDCSMP-PPFSYNG 746 + C+ P FS+ G Sbjct: 744 QAAACAPDLPAFSHGG 759 >2PNC-A nrPDB Length = 746 Score = 903 bits (2334), Expect = 0.0, Method: Composition-based stats. Identities = 302/736 (41%), Positives = 422/736 (57%), Gaps = 38/736 (5%) Query: 23 PGTLPRKAGVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKNTVFLIEMLLPKKYHV 82 P T P ++ +F+DLS +EL V SFL + L ++ + N VF +E+ LP K Sbjct: 33 PWTHPDQSQLFADLSREELTTVMSFLTQQLGPDLVDAAQARPSDNCVFSVELQLPPKAAA 92 Query: 83 LRFLDKGERHPVREARAVIFFGDQEHPNVTEFAVGPLPGPCYMRALS-PRPGYQSSWASR 141 L LD+G P REA A++FFG Q PNVTE VGPLP P YMR ++ R G + R Sbjct: 93 LAHLDRGSPPPAREALAIVFFGGQPQPNVTELVVGPLPQPSYMRDVTVERHGGPLPYYRR 152 Query: 142 PISTAEY-----ALLYHTLQEATKPLHQFFLNTTGFSFQDCHDRCLAFTDVAPRGVASGQ 196 P+ EY + L +A LH S++ + L + APRGV SG Sbjct: 153 PVLLREYLDIDQMIFNRELPQAAGVLHHCC------SYKQGGQKLLTM-NSAPRGVQSGD 205 Query: 197 RRSWLIIQRYVE--GYFLHPTGLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYA 254 R +W I + G +LHP GLELLVDH + D W V++V++ G++Y + +L ++ Sbjct: 206 RSTWFGIYYNITKGGPYLHPVGLELLVDHKALDPADWTVQKVFFQGRYYENLAQLEEQFE 265 Query: 255 DGEVDVVVLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQPHGPRFRLEG 314 G+V+VVV+ D GG ++ PP + P P GPRF ++G Sbjct: 266 AGQVNVVVIPDDGTGGFWSLKSQVPPG---------------PTPPLQFHPQGPRFSVQG 310 Query: 315 NAVLYGGWSFAFRLRSSSGLQVLNVHFGGERIAYEVSVQEAVALYGGHTPAGMQTKYLDV 374 N V W+F+F L + SG +V +V F GER+AYE+S+QEA A+YGG+TPA M T+Y+D Sbjct: 311 NRVASSLWTFSFGLGAFSGPRVFDVRFQGERLAYEISLQEAGAVYGGNTPAAMLTRYMDS 370 Query: 375 GWGLGSVTHELAPGIDCPETATFLDTFHYYDADDPVHYPRALCLFEMPTGVPLRRHFNSN 434 G+G+G L G+DCP AT++D ++ P A C+FE G+PLRRH +S+ Sbjct: 371 GFGMGYFATPLIRGVDCPYLATYMDWHFVVESQTPKTLHDAFCVFEQNKGLPLRRH-HSD 429 Query: 435 FKGGFNFYAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYVHATFYTPEG 494 F +++ G+ VLV R+ ST+ NYDY+WD +FYPNG +E K+HATGY+ + F Sbjct: 430 FLS--HYFGGVAQTVLVFRSVSTMLNYDYVWDMVFYPNGAIEVKLHATGYISSAFLFGAA 487 Query: 495 LRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTL 554 R+G ++ H +G +HTH HY+VDLDV G +N M PWSP H++ + + Sbjct: 488 RRYGNQVGEHTLGPVHTHSAHYKVDLDVGGLENWVWAEDMAFVPTAIPWSPEHQIQRLQV 547 Query: 555 EQTQYSWERQAAFRFKRKLPKYLLFTSPQENPWGHKRTYRLQIHSMADQVLPPGWQEEQA 614 + Q E QAAF P+YL S Q N WGH R YR+Q S A +P E+A Sbjct: 548 TRKQLETEEQAAFPLGGASPRYLYLASKQSNKWGHPRGYRIQTVSFAGGPMPQNSPMERA 607 Query: 615 ITWARYPLAVTKYRESELCSSSIYHQNDPWHPPVVFEQFLHNNENIENEDLVAWVTVGFL 674 +W RY LA+T+ +E+E SSS+++QNDPW P V F F+ NNE I +DLVAWVT GFL Sbjct: 608 FSWGRYQLAITQRKETEPSSSSVFNQNDPWTPTVDFSDFI-NNETIAGKDLVAWVTAGFL 666 Query: 675 HIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSLASRDTVIVWP-RDNGPNYVQ--RWIP 731 HIPH+EDIPNT T GN VGF LRP+NFF ++PS+ S D++ +D G + +P Sbjct: 667 HIPHAEDIPNTVTVGNGVGFFLRPYNFFDQEPSMDSADSIYFREGQDAGSCEINPLACLP 726 Query: 732 EDRDCSMP-PPFSYNG 746 + C+ P FS+ G Sbjct: 727 QAATCAPDLPVFSHGG 742 >3PGB-A nrPDB Length = 797 Score = 811 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 187/735 (25%), Positives = 304/735 (41%), Gaps = 37/735 (5%) Query: 19 AEPSPGTLPR-----KAGVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKNTVFLIE 73 A P T P+ K V+ L++ E V +L+ + EL L + NT+ LIE Sbjct: 49 ASPCQITPPQEIKAPKENVWYGLTDDETADVAKWLFGRPELNLTTTENAGEWDNTIALIE 108 Query: 74 MLLPKKYHVLRFLDKGERHPVREARAVIFFGDQEHPNVTEFAVGPLP--GPCYMRALSPR 131 + P K + +LD P R A + P + VGPLP L Sbjct: 109 LHRPNKSEAIPYLDGSGPAPTRHAHVRLNNRATTDPYFADILVGPLPVSNATTWEPLEFP 168 Query: 132 PGYQSSWASRPISTAEYALLYHTLQEATKPLHQFFLNTTGFSFQDCHDRCLAFTDVAPRG 191 ++ R + + L + + + L+ + + L + P Sbjct: 169 YTRKTQGQVRNVEPDGETVYSEWLFKISASIADITLDLWNGTALGLENDTLDIWGIDPLW 228 Query: 192 VASGQRRSWLIIQRYVEGYF----LHPTGLELLVDHGSTDAGHWAVEQVWYNGKFYGSPE 247 G+ W + + F L P GL L D D W + YN FY + E Sbjct: 229 QDDGRIIRWDMFWNMADDEFDSETLLPLGLYLKSDVTGRDPSQWKLLGWMYNDIFYETTE 288 Query: 248 ELARKYADGEVDVVVLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQPHG 307 E + Y V L+ + G H + RG P P ++ P G Sbjct: 289 EFRKAY--WSPGFVKLKPNVDGAWAHT-----------EQRGPVPPQDRKQPPVMIAPDG 335 Query: 308 PRFRLE--GNAVLYGGWSFAFRLRSSSGLQVLNVHFGGERIAYEVSVQEAVALYGGHTPA 365 R+ ++ V + +SF +GL + ++ + G+R+ YE+ +QEA+A Y + P Sbjct: 336 ARYSVDAERKYVTWMDFSFYIAFNRDTGLSLFDIKYKGQRVLYELGLQEALAHYAANDPV 395 Query: 366 GMQTKYLDVGWGLGSVTHELAPGIDCPETATFLDTFHYYDADDPVHYPRALCLFEMPTGV 425 YLD +G G EL G DCP A++L+T Y D + H +LCLFE Sbjct: 396 QSSVAYLDSYYGFGPYAFELLKGYDCPSYASYLNTSFYKDEETHTHV-DSLCLFEFDADY 454 Query: 426 PLRRHFNSNFKGGFNFYAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYV 485 P+ RH S F + K LR+ ST+ NYDY++ + F+ +G + ++ A+GY+ Sbjct: 455 PMARHSTS------EFVSVTKNVYFTLRSVSTIGNYDYMFSYNFHMDGTIGVEVRASGYI 508 Query: 486 HATFYTPEGLRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSP 545 + +Y G ++H L G++H H+++++ D D+ G N+ + + + WS Sbjct: 509 QSAYYA-NNQDFGYQIHDSLSGSMHDHVLNFKADFDILGPNNTIELVSVVPVTKQFSWSG 567 Query: 546 RHRVVQPTLEQTQYSWERQAAFRFKRKLPKYL-LFTSPQENPWGHKRTYRL-QIHSMADQ 603 L ++ E +A + L + + N +G R YR+ A Sbjct: 568 NKTRNTMQLGRSFIHSEDEARLNWGFNGQTQLHVVNQDKPNKFGEPRGYRILPSAGTAHL 627 Query: 604 VLPPGWQEEQAITWARYPLAVTKYRESELCSSSIYHQNDPWHPPVVFEQFLHNNENIENE 663 + A WA Y + VT+ + E S+ Y+ D +PPV F F N E++ Sbjct: 628 TVLNSSNLVHAAHWAEYDVQVTRQHDFEPTSAHPYNSQDIHNPPVDFSTFF-NGESLNQT 686 Query: 664 DLVAWVTVGFLHIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSLASRDTVIVWPRDNGP 723 DLV W+ +G H+PH+ D+PNT G P N+ P DPS + + V V D Sbjct: 687 DLVVWLNLGMHHVPHTGDLPNTVFTTAHSGVAFTPLNYLPGDPSRETVNMVRVDYSDGAA 746 Query: 724 NYVQRWIPEDRDCSM 738 V+ + + CS+ Sbjct: 747 TAVRTFGQSNETCSV 761 >1RKY-A nrPDB Length = 747 Score = 701 bits (1810), Expect = 0.0, Method: Composition-based stats. Identities = 210/714 (29%), Positives = 318/714 (44%), Gaps = 53/714 (7%) Query: 29 KAGVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKNTVFLIEMLLPKKYHVLRFLDK 88 K +++ L+ +E++ V L S + + N V IE L P K L +LD+ Sbjct: 17 KTNIWTSLAKEEVQEVLDLLHST--YNITEVTKADFFSNYVLWIETLKPNKTEALTYLDE 74 Query: 89 GERHPVREARAVIFFGDQEHPNVTEFAVGPLPGPCYMRALSPRPGYQSSWAS-------- 140 P R AR V++FG+ E E VGPLP + P Y ++ S Sbjct: 75 DGDLPPRNARTVVYFGEGEEGYFEELKVGPLP-VSDETTIEPLSFYNTNGKSKLPFEVGH 133 Query: 141 --RPISTAEYALLYHTLQEATKPLHQFFLNTTGFSFQD--CHDRCLAFTDVAPRGVASGQ 196 R S A+ + L L T + G ++D CH D A G Sbjct: 134 LDRIKSAAKSSFLNKNLN--TTIMRDVLEGLIGVPYEDMGCHSAAPQLHDPAT-GATVDY 190 Query: 197 RRSWLIIQRYVEGYFLHPTGLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYADG 256 + + E L PTG D D W + + YN K Y S EEL A Sbjct: 191 GTCNINTENDAEN--LVPTGFFFKFDMTGRDVSQWKMLEYIYNNKVYTSAEELYE--AMQ 246 Query: 257 EVDVVVLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVS---GPRLVQPHGPRFRLE 313 + D V L P D T R D H+ PRLV+P G R+ + Sbjct: 247 KDDFVTL--PKIDVDNLDWTV--------IQRNDSAPVRHLDDRKSPRLVEPEGRRWAYD 296 Query: 314 GNAVL--YGGWSFAFRLRSSSGLQVLNVHFGGERIAYEVSVQEAVALYGGHTPAGMQTKY 371 G+ + W F +G+ ++ F GERI YE+S+QE +A YG P T Y Sbjct: 297 GDEEYFSWMDWGFYTSWSRDTGISFYDITFKGERIVYELSLQELIAEYGSDDPFNQHTFY 356 Query: 372 LDVGWGLGSVTHELAPGIDCPETATFL--DTFHYYDADDPVHYPRALCLFEMPTGVPLRR 429 D+ +G+G+ L PG DCP TA + DTF Y + + + C+FE L R Sbjct: 357 SDISYGVGN-RFSLVPGYDCPSTAGYFTTDTFEYDE---FYNRTLSYCVFENQEDYSLLR 412 Query: 430 HFNSNFKGGFNFYAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYVHATF 489 H G ++ A + L +R ST+ NYDY + + F+ +G +E + A GY+ A + Sbjct: 413 H------TGASYSAITQNPTLNVRFISTIGNYDYNFLYKFFLDGTLEVSVRAAGYIQAGY 466 Query: 490 YTPEG-LRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHR 548 + PE +G ++H L G+ H H+++Y+VDLDV GTKN MK ++ PW+P Sbjct: 467 WNPETSAPYGLKIHDVLSGSFHDHVLNYKVDLDVGGTKNRASQYVMKDVDVEYPWAPGTV 526 Query: 549 VVQPTLEQTQYSWERQAAFRFKRKLPKYLLFTSPQE-NPWGHKRTYRLQIHSMA-DQVLP 606 + + + E + LL S +E N +G+ R Y + +++ Sbjct: 527 YNTKQIAREVFENEDFNGINWPENGQGILLIESAEETNSFGNPRAYNIMPGGGGVHRIVK 586 Query: 607 PGWQEEQAITWARYPLAVTKYRESELCSSSIYHQNDPWHPPVVFEQFLHNNENIENEDLV 666 + WAR L +TK++++EL SS+ + N + PPV F FL ++E+++ ED+V Sbjct: 587 NSRSGPETQNWARSNLFLTKHKDTELRSSTALNTNALYDPPVNFNAFL-DDESLDGEDIV 645 Query: 667 AWVTVGFLHIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSLASRDTVIVWPRD 720 AWV +G H+P+S D+PNT F+L PFN+F + S + V D Sbjct: 646 AWVNLGLHHLPNSNDLPNTIFSTAHASFMLTPFNYFDSENSRDTTQQVFYTYDD 699 >3LOY-A nrPDB Length = 633 Score = 488 bits (1256), Expect = e-138, Method: Composition-based stats. Identities = 119/480 (24%), Positives = 207/480 (43%), Gaps = 32/480 (6%) Query: 243 YGSPEELARKYADGEVDVVVLEDPLPGGKGHDSTE-----EPPLFSSHKP-RGDFPSPIH 296 Y P + + + V D LPGG TE E P H G+ P+ Sbjct: 168 YSLPLKFSPVFECLTKKFV-RMDYLPGGADETVTETQAWDEFPFVEYHPDLNGETIVPLK 226 Query: 297 VSGPRLVQ-PHGPRFRLEGNAVLYGGWSFAFRLRSSSGLQVLNVHFGGERIAYEVSVQEA 355 P +VQ P GP F ++G+ + + GW F G + ++HF G + Y +S+ E Sbjct: 227 ---PLIVQQPEGPSFNVDGHKISWQGWEFFVIPTVREGFAIYDIHFKGRSVVYRLSLSEM 283 Query: 356 VALYGGHTPAGMQTKYLDVG-WGLGSVTHELAPGIDCPETATFLDTFHYYDADDPVHYPR 414 YG + + D+G G G+ + LA G DC ++D D V P Sbjct: 284 TVPYGDPRAPFHRKQAFDLGDCGFGATGNSLALGCDCLGVIKYMDCRRVNTNGDSVLIPN 343 Query: 415 ALCLFEMPTGVPLRRHFNSNFKGGFNFYAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGV 474 +CL E G+ L +H +N++ A + + V++T +TV NY+Y+ + IF G Sbjct: 344 TVCLHEQDGGL-LYKH--TNYRTNVPVIA--RRREFVVQTIATVANYEYMLNIIFDQAGE 398 Query: 475 MEAKMHATGYVHATFYTPE-GLRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSF---Q 530 + + ATG + + + GT + ++ H H++ +R+D V G +N+ Sbjct: 399 IRIHVRATGILSTMPLDKDVTVPWGTNVGPRVMAAYHQHMLSFRIDPAVDGYENTVVFDD 458 Query: 531 TLQMKLENITNPWSPRHRVVQPTLEQTQYSWERQAAFRFKRKLPKYLLFTSPQENPWG-H 589 ++M+ NP++ + +E+ Y Q+ F + Y + + NP Sbjct: 459 VIRMEKNTKLNPYNVGFVTERTVVEKPGY--VEQSPFTNRS----YKIINENKINPISKK 512 Query: 590 KRTYRLQIHSMADQVLPPGWQEEQAITWARYPLAVTKYRESELCSSSIYHQNDPWHPPVV 649 Y++ + + + + +A + VTKYR++EL ++ + Sbjct: 513 PVAYKIMMPARQMLLADEDSYNNKRAQFATQQVWVTKYRDNELYAAGEFTNQS--QTDTG 570 Query: 650 FEQFLHNNENIENEDLVAWVTVGFLHIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSLA 709 + +EN+ N++ V W T+GF HIP ED P P + L PF FF ++P+L+ Sbjct: 571 LGVWARRDENVRNDNPVVWATLGFTHIPRVEDFP--VMPVEAHEIALVPFGFFDKNPALS 628 >2CG0-A nrPDB Length = 646 Score = 487 bits (1253), Expect = e-138, Method: Composition-based stats. Identities = 111/459 (24%), Positives = 188/459 (40%), Gaps = 31/459 (6%) Query: 258 VDVVVLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQPHGPRFRLEG-NA 316 +D V P G D PL ++ KP + QP GP F + G N Sbjct: 188 IDTGVFPVPAEHGNYTDPELTGPLRTTQKPIS------------ITQPEGPSFTVTGGNH 235 Query: 317 VLYGGWSFAFRLRSSSGLQVLNVHF-GGER---IAYEVSVQEAVALYGGHTPAGMQTKYL 372 + + WS G+ + N+ F G+R I S+ E V YG +P Y Sbjct: 236 IEWEKWSLDVGFDVREGVVLHNIAFRDGDRLRPIINRASIAEMVVPYGDPSPIRSWQNYF 295 Query: 373 DVG-WGLGSVTHELAPGIDCPETATFLDTFHYYDADDPVHYPRALCLFEMPTGVPLRRHF 431 D G + +G + L G DC T+L +P +C+ E G+ L +H Sbjct: 296 DTGEYLVGQYANSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEEDWGI-LAKH- 353 Query: 432 NSNFKGGFNFYAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYVHATFYT 491 S+ G N+ + + +V+ +T+ NYDY + + Y +G +E + ATG V + + Sbjct: 354 -SDLWSGINYT--RRNRRMVISFFTTIGNYDYGFYWYLYLDGTIEFEAKATGVVFTSAFP 410 Query: 492 PEGLRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQ 551 G + ++L L H H+ R+D+ + G N + + P + R Sbjct: 411 EGGSDNISQLAPGLGAPFHQHIFSARLDMAIDGFTNRVEEEDVV-RQTMGPGNERGNAF- 468 Query: 552 PTLEQTQYSWERQAAFRFKRKLPKYLLFTSPQ-ENPWGHKRTYRLQIHSMADQVLPPGWQ 610 + ++T + E +A + + + ++P+ +N Y+L H+ + PG Sbjct: 469 -SRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADPGSS 527 Query: 611 EEQAITWARYPLAVTKYRESELCSSSIYHQNDPWHPPVVFEQFLHNNENIENEDLVAWVT 670 + +A L VT+Y + E + + ++ + +I+ +D+V W T Sbjct: 528 IARRAAFATKDLWVTRYADDERYPTGDFVNQ--HSGGAGLPSYIAQDRDIDGQDIVVWHT 585 Query: 671 VGFLHIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSLA 709 G H P ED P P ++VGF LRP FF P L Sbjct: 586 FGLTHFPRVEDWP--IMPVDTVGFKLRPEGFFDRSPVLD 622 >3NBJ-A nrPDB Length = 692 Score = 471 bits (1213), Expect = e-133, Method: Composition-based stats. Identities = 137/660 (20%), Positives = 239/660 (36%), Gaps = 72/660 (10%) Query: 67 NTVFLIEMLLPKKYHVLRFLDKGERHPVREARAVIFFGDQEHPNVTEFAVGPLPGPCYMR 126 NTV L E P + +++ ++G P R A VI + P V E V + Sbjct: 52 NTVTLRE---PARKAYIQWKEQGGPLPPRLAYYVIL--EAGKPGVKEGLV-------DLA 99 Query: 127 ALSPRPGYQSSWASRPISTAEYALLYHT-LQEATKPLHQFFLNTTGFSFQDCHDRCLAFT 185 +LS +PI T E ++ + Q L+ G + H Sbjct: 100 SLSVIETRALE-TVQPILTVEDLCSTEEVIRNDPAVIEQCVLS--GIPANEMHKVYCDPW 156 Query: 186 DV--APRGVASGQRRSWLIIQRYVEG--YFLHPTGLELLVDHGSTDAGHWAVEQVWYNGK 241 + R + + L+ R E + HP +VD Sbjct: 157 TIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDTEEKKV------------I 204 Query: 242 FYGSPEELARKYADGEVDVVVLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPR 301 F P + + H + + P Sbjct: 205 FIDIPNRRRKVSKHKHANFY---------PKHMIEKVGAMRPEAPPIN------------ 243 Query: 302 LVQPHGPRFRLEGNAVLYGGWSFAFRLRSSSGLQVLNVHFGG----ERIAYEVSVQEAVA 357 + QP G F++ GN + + + F G+ + +V + I + +S+ E + Sbjct: 244 VTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGNVRPIFHRISLSEMIV 303 Query: 358 LYGGHTPAGMQTKYLDVG-WGLGSVTHELAPGIDCPETATFLDTFHYYDADDPVHYPRAL 416 +G + LD+G +G G +T+ L+ G DC +LD A DP+ A+ Sbjct: 304 PFGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAV 363 Query: 417 CLFEMPTGVPLRRHFNSNFKGGFNFYAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVME 476 C+ E G+ L +H S+F+ F + LV+ T N +Y ++F +G + Sbjct: 364 CIHEEDDGL-LFKH--SDFRDNFATSLVTRATKLVVSQIFTAANXEYCLYWVFMQDGAIR 420 Query: 477 AKMHATGYVHATFY--TPEGLRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQM 534 + TG ++ E GTR++ ++ + H HL R+D + G NS Sbjct: 421 LDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDA 480 Query: 535 KLENITNP-WSPRHRVVQPTL-EQTQYSWERQAAFRFKRKLPK-YLLFTSPQENPW-GHK 590 K P SP + E+T + + + ++ + + +F + NP+ G Sbjct: 481 KSSP--YPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKP 538 Query: 591 RTYRLQIHSMADQVLPPGWQEEQAITWARYPLAVTKYRESELCSSSIYHQNDPWHPPVV- 649 +Y+L + G + WA + + V Y+++ L S + Sbjct: 539 PSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGM 598 Query: 650 FEQFLHNNENIENEDLVAWVTVGFLHIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSLA 709 E +ENI+N D++ + T G H P ED P P + +LRP +FF E+P L Sbjct: 599 REWIGDGSENIDNTDILFFHTFGITHFPAPEDFP--LXPAEPITLMLRPRHFFTENPGLD 656 >1KSI-A nrPDB Length = 642 Score = 465 bits (1195), Expect = e-131, Method: Composition-based stats. Identities = 115/465 (24%), Positives = 184/465 (39%), Gaps = 28/465 (6%) Query: 272 GHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLV--QPHGPRFRLEGNAVLYGGWSFAFRLR 329 D P ++ P L QP GP F++ G++V + W F Sbjct: 186 DRDIEAVPTAENTEYQVSKQSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKFHIGFD 245 Query: 330 SSSGL-----QVLNV-HFGGERIAYEVSVQEAVALYGGHTPAGMQTKYLDVG-WGLGSVT 382 +G+ + ++ R+ Y+ + E Y T + D G +G G T Sbjct: 246 VRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDSGEFGFGLST 305 Query: 383 HELAPGIDCPETATFLDTFHYYDADDPVHYPRALCLFEMPTGVPLRRHFNSNFKGGFNFY 442 L P DCP A F+DT+ + P+ A+C+FE G + RH + + Sbjct: 306 VSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQ-YGNIMWRHTENGIPNE-SIE 363 Query: 443 AGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYVH---ATFYTPEGLR--- 496 L++RT TV NYD + D+ F +G ++ + +G + + ++ Sbjct: 364 ESRTEVNLIVRTIVTVGNYDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDEIKEDL 423 Query: 497 HGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTLEQ 556 HG + + IG H H Y +D D+ GT NSF+ +K I + S R T E Sbjct: 424 HGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYW--TTET 481 Query: 557 TQYSWERQAAFRFKRKLPKYLLFTSPQENPWGHKRTYRLQIHSMADQVLPPGWQEEQAIT 616 E A + ++ + G++ YRL A +L + Sbjct: 482 QTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIRGA 541 Query: 617 WARYPLAVTKYRESELCSSSIYHQNDPWHPPVVFEQFLHNNENIENEDLVAWVTVGFLHI 676 + Y + VT Y +E + +Y + + + N I N+D+V W VG H+ Sbjct: 542 FTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAV--WTKQNREIVNKDIVMWHVVGIHHV 599 Query: 677 PHSEDIPNTATPGNSVGFLLRPFNFFPEDP---SLASRDTVIVWP 718 P ED P P S F LRP NFF +P +L+ RD + WP Sbjct: 600 PAQEDFP--IMPLLSTSFELRPTNFFERNPVLKTLSPRD--VAWP 640 >1D6Z-A nrPDB Length = 727 Score = 456 bits (1172), Expect = e-128, Method: Composition-based stats. Identities = 126/459 (27%), Positives = 200/459 (43%), Gaps = 40/459 (8%) Query: 277 EEPPLFSSHKPRGDFPSPIHVSGP----RLVQPHGPRFRLEGNAVLYGGWSFAFRLRSSS 332 EE P+ F V+ ++++P G + + G+ + + W F + S Sbjct: 279 EEGPVVPVPMTARPFDGRDRVAPAVKPMQIIEPEGKNYTITGDMIHWRNWDFHLSMNSRV 338 Query: 333 GLQVLNVHFGG----ERIAYEVSVQEAVALYGGHTPAGMQTKYLDVG-WGLGSVTHELAP 387 G + V + ++ YE S+ + YG YLD G +G+G++T +A Sbjct: 339 GPMISTVTYNDNGTKRKVMYEGSLGGMIVPYGDPDIGWYFKAYLDSGDYGMGTLTSPIAR 398 Query: 388 GIDCPETATFLDTFHYYDADDPVHYPRALCLFEMPTGVPLRRHFNSNFKGGFNFYAGLKG 447 G D P A L+ P+ PRA+ +FE G P +H + Sbjct: 399 GKDAPSNAVLLNETIADYTGVPMEIPRAIAVFERYAG-PEYKHQEMGQPN-----VSTER 452 Query: 448 QVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGY-----VHATFYTPEG----LRHG 498 + LV+R STV NYDYI+D+IF+ NG + ATG V A E R+G Sbjct: 453 RELVVRWISTVGNYDYIFDWIFHENGTIGIDAGATGIEAVKGVKAKTMHDETAKDDTRYG 512 Query: 499 TRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTLEQTQ 558 T + +++G H H+ ++R+DLDV G NS + ++ T PR + Q Sbjct: 513 TLIDHNIVGTTHQHIYNFRLDLDVDGENNSLVAMDPVVKPNT-AGGPRTS--TMQVNQYN 569 Query: 559 YSWERQAAFRFKRKLPKYLLFTSPQENPWGHKRTYRLQI-----HSMAD--QVLPPGWQE 611 E+ AA +F + LL +EN G+ +Y++ H +A Q P W Sbjct: 570 IGNEQDAAQKFDPGTIR-LLSNPNKENRMGNPVSYQIIPYAGGTHPVAKGAQFAPDEWIY 628 Query: 612 EQAITWARYPLAVTKYRESELCSSSIYHQNDPWHPPVVFEQFLHNNENIENEDLVAWVTV 671 +++ L VT+Y E Y N H Q+ +NE+++N D V W+T Sbjct: 629 -HRLSFMDKQLWVTRYHPGERFPEGKY-PNRSTH-DTGLGQYSKDNESLDNTDAVVWMTT 685 Query: 672 GFLHIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSLAS 710 G H+ +E+ P P V LL+P+NFF E P+L + Sbjct: 686 GTTHVARAEEWP--IMPTEWVHTLLKPWNFFDETPTLGA 722 >3ZIU-A nrPDB Length = 637 Score = 32.8 bits (73), Expect = 0.56, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 33/107 (30%), Gaps = 7/107 (6%) Query: 205 RYVEGYF--LHPTGLELLVD--HGSTDAGHWAVEQVWYNGKFYGSPEELARKYADGEVDV 260 + +E + L G + +TD ++ Q + + E+ + + Sbjct: 107 KNIENFRRQLKSLGFSFDYEKEVNTTDPSYYRWTQWIFKQIYKKGLAEIREVDVNWCPGL 166 Query: 261 VVLEDP---LPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQ 304 + + KG +E KP + I RL++ Sbjct: 167 GTVLANEEIVENDKGEMVSERGSFPVYKKPMKQWVLKITNYADRLLE 213 >3IHG-A nrPDB Length = 535 Score = 32.1 bits (71), Expect = 0.97, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 58/164 (35%), Gaps = 14/164 (8%) Query: 210 YFLHPTGLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYADGEVDVVVLEDPLPG 269 Y+LH E G TD V Y+ PE+ + + + + P Sbjct: 223 YYLHHP--EFKGTFGPTDRPDRHTLFVEYDPDEGERPEDFTPQRCVELIGLAL---DAPE 277 Query: 270 GKGHDSTEEPPLFSSHKPRG--DFPSPIHVSGPRLVQPHGPRFRLEGNAVLYGG----WS 323 K + ++ + + ++ P G + GNA + G W Sbjct: 278 VKPELVDIQGWEMAARIAERWREGRVFLAGDAAKVTPPTG---GMSGNAAVADGFDLAWK 334 Query: 324 FAFRLRSSSGLQVLNVHFGGERIAYEVSVQEAVALYGGHTPAGM 367 A L+ +G +L+ + ++A E+ V EA+A+Y M Sbjct: 335 LAAVLQGQAGAGLLDTYEDERKVAAELVVAEALAIYAQRMAPHM 378 >4NZF-A nrPDB Length = 448 Score = 31.7 bits (70), Expect = 1.3, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 24/129 (18%) Query: 219 LLVDHGSTDAGH------WAVEQVWYNGK------FYGSPEELARKYADGEVDVVVLEDP 266 L + G+ D W + + + +Y S +L YA VD V + D Sbjct: 143 LGTNVGARDIADTNSICPWNTDMYGVDHRKEGAQAYYDSLFQL---YAQWGVDFVKVADI 199 Query: 267 LPGGKGHDSTEEPPLFSSHKPR-------GDFPSPIHVSGPRLVQPHGPRFRLEGNAVLY 319 + TEE + R P P + L + +R+ + + Sbjct: 200 VASKLYGTHTEEIKMIRKAIDRCGRPIVLSLSPGPAPLDHATLFVENANMWRMTDD--FW 257 Query: 320 GGWSFAFRL 328 W + + Sbjct: 258 DRWELLYDM 266 >4L6X-A nrPDB Length = 656 Score = 31.7 bits (70), Expect = 1.3, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 27/100 (27%), Gaps = 10/100 (10%) Query: 109 PNVTEFAVGPLPGPCYMRALSPRPGYQSSWASRPISTAEYALLYHTLQEATKPLHQFFLN 168 A L M+ SP S WA S Y LQ A + N Sbjct: 327 GYQNPMAAWALANDSDMKPKSP--NGASDWA---KSLKRQIEFYRWLQSAEGAIAGGATN 381 Query: 169 TTGFSFQDCHDRCLAFTDVA----PRGVASGQRRSWLIIQ 204 + ++ F +A P G +W Q Sbjct: 382 SWNGRYEKYPAGTATFYGMAYEPNPVYHDPGS-NTWFGFQ 420 >1T0O-A nrPDB Length = 417 Score = 31.3 bits (69), Expect = 1.7, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 21/68 (30%), Gaps = 2/68 (2%) Query: 222 DHGSTDAGHWAVEQVWYNGKFYGSPEELARKYADGEVDVVVLEDPLPGGKGHDSTEEPPL 281 D + D W V+ + Y+ P + +Y D V D T PP Sbjct: 115 DVDAADFADWGVDYLKYDN--CNVPSDWQDEYVACNPDFVKTGPNGTCTTALDPTLAPPG 172 Query: 282 FSSHKPRG 289 + + Sbjct: 173 YDWSTSKS 180 >1L1Y-A nrPDB Length = 678 Score = 30.9 bits (68), Expect = 2.2, Method: Composition-based stats. Identities = 50/330 (15%), Positives = 89/330 (26%), Gaps = 72/330 (21%) Query: 337 LNVHFGGERIAYEVSVQEAVALYGGHTPAGMQTKYLDVGWGLGSVTHELAPGIDCPETAT 396 + F R+ + + V+ YG + +D +G G+ T AT Sbjct: 153 SELKFDTVRVGSDPVHNDLVSAYGPNMYLMHWLMDVDNWYGFGTGTR-----------AT 201 Query: 397 FLDTFHYYDADDPVHYPRALCLFEMPTGVP---------------LRRHFNSNFKGGFNF 441 F++TF + + + E G P R+ N+ G Sbjct: 202 FINTFQRGEQESTWETIPHPSIEEFKYGGPNGFLDLFTKDRSYAKQWRYTNAPDAEGRAI 261 Query: 442 YAGL------------KGQVLVLRTTSTVYNY--DYIWDFIFYPNGVMEAKMHATGYVHA 487 A V+ + + ++ + ++D F G + K ATGY A Sbjct: 262 QAVYWANKWAKEQGKGSAVASVVSKAAKMGDFLRNDMFDKYFMKIGA-QDKTPATGYDSA 320 Query: 488 TFYTPEGLRHGTRLHTH---LIGNIHTHLVHYRVDLDVAGTKN----SFQTLQMKLENIT 540 + G + IG H H G +N Q + Sbjct: 321 HYLMAWYTAWGGGIGASWAWKIGCSHAHF----------GYQNPFQGWVSATQSDFAPKS 370 Query: 541 NPWSPRHRVVQPTLEQT--QYSWERQAAFRFKRKLPKYLLFTSP-QENPWGHKRTYRLQI 597 S R + ++ Y W + A + ++ P G Y Sbjct: 371 ---SNGKRDWTTSYKRQLEFYQWLQSA--EGGIAGGATNSWNGRYEKYPAGTSTFYG-MA 424 Query: 598 HSMADQVLPPGWQEEQAITWARYPLAVTKY 627 + PG W + + Sbjct: 425 YVPHPVYADPGSN-----QWFGFQAWSMQR 449 >4KC7-A nrPDB Length = 474 Score = 29.4 bits (64), Expect = 6.4, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 48/201 (23%), Gaps = 35/201 (17%) Query: 429 RHFNSNFKGGFNFYAGLKGQVLVLRTTSTVYNYDYIWDFIFYPNGVMEAKMHATGYVH-- 486 R S G + K + + + + NY F + A GYV Sbjct: 257 RVARSKNPNGPYYDPEGKSMENCMGSKTVISNYGAKLVGNFILSESNTIDFKAFGYVSPG 316 Query: 487 --ATFYTPEGLRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWS 544 + +Y PE ++ HT G T RV F P+ Sbjct: 317 HNSAYYDPETGKYFIFFHTRFPGRGET--YQLRV-------HQLFLNEDGWFVMAPFPYG 367 Query: 545 PRHRVVQPTLEQTQYSWERQAAFRFKRKLPKYLLFTSPQENPWGHKRTYRLQIHSMADQV 604 + + + +Y G + T +++ Sbjct: 368 GETV----------------SKLPNEEIVGEYQFINH------GKEITDKIKQPVRIKLN 405 Query: 605 LPPGWQEEQAITWARYPLAVT 625 W R +T Sbjct: 406 SDGSITGAVEGRWERKEHYIT 426 >3NTT-A nrPDB Length = 724 Score = 29.0 bits (63), Expect = 7.3, Method: Composition-based stats. Identities = 53/318 (16%), Positives = 85/318 (26%), Gaps = 52/318 (16%) Query: 404 YDADDPVHYPRALCLFEMPTGVPLRRHFNSNFKGGFNFYAGLKGQVLVLRT-TSTVYNY- 461 + ++P CL + R +NF+ +NF + N Sbjct: 374 DNTENPTERSSFFCL--EYFPSKMLR-TGNNFEFTYNFEEVPFHSSFAPSQNLFKLANPL 430 Query: 462 --DYIWDFIFYPN-GVMEAKMHATGYVHATFYTPEGLRHGTRLHTHLIGNIHTHLVHYRV 518 Y++ F+ N G ++ + G T+ G +L ++ R Sbjct: 431 VDQYLYRFVSTNNTGGVQFNKNLAGRYANTYKNWFPGPMGRTQGWNLGSGVN------RA 484 Query: 519 DLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTLEQTQYSWERQAAFRFKRKLPKY-- 576 + T N + P P Y+ E F + P Sbjct: 485 SVSAFATTNRMELEGASY---QVPPQPNGMTNNLQ-GSNTYALENTMIFNSQPANPGTTA 540 Query: 577 ------LLFTSPQENPWGHKRTYRLQIHSMADQVLPPGWQEEQAITWARYPLAVTKYRES 630 +L TS E ++ Y + Q+ A Y L Sbjct: 541 TYLEGNMLITSESETQPVNRVAYNVG-----GQMATNNQSSTTAPATGTYNLQ------- 588 Query: 631 ELCSSSI------YHQNDPWHPPVVFEQFLHNNENIENEDLVAWVTVGFLHIPHSEDIPN 684 E+ S+ Y Q W H + + G H P I N Sbjct: 589 EIVPGSVWMERDVYLQGPIWAKIPETGAHFHPSPAMGG--------FGLKHPPPMMLIKN 640 Query: 685 TATPGNSVGFLLRPFNFF 702 T PGN F P + F Sbjct: 641 TPVPGNITSFSDVPVSSF 658 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.304 0.124 0.326 Lambda K H 0.267 0.0381 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 28,492,253 Number of Sequences: 36641 Number of extensions: 1164278 Number of successful extensions: 2679 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 2524 Number of HSP's gapped (non-prelim): 46 length of query: 751 length of database: 10,336,785 effective HSP length: 104 effective length of query: 647 effective length of database: 6,526,121 effective search space: 4222400287 effective search space used: 4222400287 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 63 (29.0 bits)