BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P19447 (782 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5IY9-V nrPDB 1640 0.0 6NMI-A nrPDB 1306 0.0 5OF4-A nrPDB 1087 0.0 5SVA-Z nrPDB 816 0.0 5OQJ-7 nrPDB 776 0.0 5FMF-1 nrPDB 628 e-180 4ERN-A nrPDB 605 e-173 2FWR-A nrPDB 122 6e-28 5TNU-A nrPDB 94 2e-19 2FZ4-A nrPDB 70 3e-12 1Z6A-A nrPDB 39 0.007 1Z5Z-A nrPDB 39 0.011 2ZJ8-A nrPDB 38 0.021 3B6E-A nrPDB 35 0.085 5JXR-A nrPDB 35 0.14 3H1T-A nrPDB 34 0.30 4GL2-A nrPDB 33 0.59 1R6B-X nrPDB 32 0.86 1Y07-A nrPDB 32 1.0 5JBJ-A nrPDB 32 1.2 4NSC-A nrPDB 30 2.7 >5IY9-V nrPDB Length = 782 Score = 1640 bits (4247), Expect = 0.0, Method: Compositional matrix adjust. Identities = 782/782 (100%), Positives = 782/782 (100%) Query: 1 MGKRDRADRDKKKSRKRHYEDEEDDEEDAPGNDPQEAVPSAAGKQVDESGTKVDEYGAKD 60 MGKRDRADRDKKKSRKRHYEDEEDDEEDAPGNDPQEAVPSAAGKQVDESGTKVDEYGAKD Sbjct: 1 MGKRDRADRDKKKSRKRHYEDEEDDEEDAPGNDPQEAVPSAAGKQVDESGTKVDEYGAKD 60 Query: 61 YRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTA 120 YRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTA Sbjct: 61 YRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTA 120 Query: 121 YSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIMQFIKLCTVSYGKVKLVLKHNRYFVESC 180 YSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIMQFIKLCTVSYGKVKLVLKHNRYFVESC Sbjct: 121 YSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIMQFIKLCTVSYGKVKLVLKHNRYFVESC 180 Query: 181 HPDVIQHLLQDPVIRECRLRNSEGEATELITETFTSKSAISKTAESSGGPSTSRVTDPQG 240 HPDVIQHLLQDPVIRECRLRNSEGEATELITETFTSKSAISKTAESSGGPSTSRVTDPQG Sbjct: 181 HPDVIQHLLQDPVIRECRLRNSEGEATELITETFTSKSAISKTAESSGGPSTSRVTDPQG 240 Query: 241 KSDIPMDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRND 300 KSDIPMDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRND Sbjct: 241 KSDIPMDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRND 300 Query: 301 SVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR 360 SVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR Sbjct: 301 SVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR 360 Query: 361 CLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRS 420 CLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRS Sbjct: 361 CLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRS 420 Query: 421 WEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL 480 WEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL Sbjct: 421 WEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL 480 Query: 481 NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK 540 NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK Sbjct: 481 NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK 540 Query: 541 FRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP 600 FRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP Sbjct: 541 FRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP 600 Query: 601 KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFY 660 KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFY Sbjct: 601 KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFY 660 Query: 661 SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAAT 720 SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAAT Sbjct: 661 SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAAT 720 Query: 721 DLDAEEEVVAGEFGSRSSQASRRFGTMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRF 780 DLDAEEEVVAGEFGSRSSQASRRFGTMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRF Sbjct: 721 DLDAEEEVVAGEFGSRSSQASRRFGTMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRF 780 Query: 781 RK 782 RK Sbjct: 781 RK 782 >6NMI-A nrPDB Length = 653 Score = 1306 bits (3379), Expect = 0.0, Method: Compositional matrix adjust. Identities = 634/697 (90%), Positives = 635/697 (91%), Gaps = 44/697 (6%) Query: 34 PQEAVPSAAGKQVDESGTKVDEYGAKDYRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVY 93 PQEAVPSAAGKQVDESGTKVDEYGAKDYRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVY Sbjct: 1 PQEAVPSAAGKQVDESGTKVDEYGAKDYRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVY 60 Query: 94 KYAQDFLVAIAEPVCRPTHVHEYKLTAYSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIM 153 KYAQDFLVAIAEPVCRPTHVHEYKLTAYSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIM Sbjct: 61 KYAQDFLVAIAEPVCRPTHVHEYKLTAYSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIM 120 Query: 154 QFIKLCTVSYGKVKLVLKHNRYFVESCHPDVIQHLLQDPVIRECRLRNSEGEATELITET 213 QFIKLCTVSYGKVKLVLKHNRYFVESCHPDVIQHLLQDPVIRECRLRNSE Sbjct: 121 QFIKLCTVSYGKVKLVLKHNRYFVESCHPDVIQHLLQDPVIRECRLRNSEXXXXXXXXXX 180 Query: 214 FTSKSAISKTAESSGGPSTSRVTDPQGKSDIPMDLFDFYEQMDKDEEEEEETQTVSFEVK 273 +T VSFEVK Sbjct: 181 XXXXXXXXQT--------------------------------------------VSFEVK 196 Query: 274 QEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRA 333 QEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRA Sbjct: 197 QEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRA 256 Query: 334 RSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFT 393 RSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFT Sbjct: 257 RSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFT 316 Query: 394 SDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTIPAKMFRR 453 SDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTIPAKMFRR Sbjct: 317 SDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTIPAKMFRR 376 Query: 454 VLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCP 513 VLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCP Sbjct: 377 VLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCP 436 Query: 514 MSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAI 573 MSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAI Sbjct: 437 MSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAI 496 Query: 574 RLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSR 633 RLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSR Sbjct: 497 RLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSR 556 Query: 634 RQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKL 693 RQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKL Sbjct: 557 RQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKL 616 Query: 694 AGMEEEDLAFSTKEEQQQLLQKVLAATDLDAEEEVVA 730 AGMEEEDLAFSTKEEQQQLLQKVLAATDLDAEEEVVA Sbjct: 617 AGMEEEDLAFSTKEEQQQLLQKVLAATDLDAEEEVVA 653 >5OF4-A nrPDB Length = 553 Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust. Identities = 517/517 (100%), Positives = 517/517 (100%) Query: 266 QTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKSLR 325 QTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKSLR Sbjct: 37 QTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKSLR 96 Query: 326 KMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTID 385 KMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTID Sbjct: 97 KMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTID 156 Query: 386 DSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHT 445 DSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHT Sbjct: 157 DSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHT 216 Query: 446 IPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKV 505 IPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKV Sbjct: 217 IPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKV 276 Query: 506 QCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNV 565 QCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNV Sbjct: 277 QCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNV 336 Query: 566 FALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQ 625 FALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQ Sbjct: 337 FALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQ 396 Query: 626 ISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGY 685 ISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGY Sbjct: 397 ISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGY 456 Query: 686 SFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAATDLDAEEEVVAGEFGSRSSQASRRFG 745 SFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAATDLDAEEEVVAGEFGSRSSQASRRFG Sbjct: 457 SFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAATDLDAEEEVVAGEFGSRSSQASRRFG 516 Query: 746 TMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRFRK 782 TMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRFRK Sbjct: 517 TMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRFRK 553 >5SVA-Z nrPDB Length = 843 Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/729 (56%), Positives = 537/729 (73%), Gaps = 30/729 (4%) Query: 67 LKDDHTSRPLWVAP-DGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTAYSLYA 125 L+ DH SRPLW++P DG I LE+FSP+ + AQDFLV IAEP+ RP+H+HEYK+TAYSLYA Sbjct: 123 LRPDHASRPLWISPSDGRIILESFSPLAEQAQDFLVTIAEPISRPSHIHEYKITAYSLYA 182 Query: 126 AVSVGLQTSDITEYLRKLSKTGVPDGIMQFIKLCTVSYGKVKLVLKHNRYFVESCHPDVI 185 AVSVGL+T DI L +LSK V + I+ FIK T+SYGKVKLV+KHNRYFVE+ D++ Sbjct: 183 AVSVGLETDDIISVLDRLSKVPVAESIINFIKGATISYGKVKLVIKHNRYFVETTQADIL 242 Query: 186 QHLLQDPVIRECRL-RNSEGEATELITETFTSKSAISKTAESSGGPSTSRVTDPQGKSDI 244 Q LL D VI R+ + + + E + + + +++G P+T+ +P +D+ Sbjct: 243 QMLLNDSVIGPLRIDSDHQVQPPEDVLQ--------QQLQQTAGKPATN--VNP---NDV 289 Query: 245 PMDLFDFYEQMDKDEEEEEETQTV-SFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVN 303 ++ EEE+++ V SFE+ E +E ++KRC ++YP+L EYDFRND N Sbjct: 290 EAVFSAVIGGDNEREEEDDDIDAVHSFEIANESVEVVKKRCQEIDYPVLEEYDFRNDHRN 349 Query: 304 PDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLV 363 PD++IDLKP+ +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TAACT++K +V Sbjct: 350 PDLDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIV 409 Query: 364 LGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDK-PIGCSVAISTYSMLGHTTKRSWE 422 L S+VSV QW+ QF W T+ FTSD K+ + +STYSM+ +T RS + Sbjct: 410 LCTSSVSVMQWRQQFLQWCTLQPENCAVFTSDNKEMFQTESGLVVSTYSMVANTRNRSHD 469 Query: 423 AERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNF 482 +++VM++L +EWG +ILDEVH +PA MFRRV++ + AH KLGLTATLVREDDKI DLNF Sbjct: 470 SQKVMDFLTGREWGFIILDEVHVVPAAMFRRVVSTIAAHAKLGLTATLVREDDKIGDLNF 529 Query: 483 LIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFR 542 LIGPKLYEANWMEL G+IA VQCAEVWCPM+ EFY+EY+ +KR+LLY MNP KF+ Sbjct: 530 LIGPKLYEANWMELSQKGHIANVQCAEVWCPMTAEFYQEYLRETARKRMLLYIMNPTKFQ 589 Query: 543 ACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKI 602 ACQFLI++HERR DKIIVF+DNV+AL+EYA+++ KP+IYG T Q ERM ILQNF++N +I Sbjct: 590 ACQFLIQYHERRGDKIIVFSDNVYALQEYALKMGKPFIYGSTPQQERMNILQNFQYNDQI 649 Query: 603 NTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSL 662 NTIF+SKVGDTS DLPEA LIQISSH GSRRQEAQRLGR+LRAK+ E +NAFFYSL Sbjct: 650 NTIFLSKVGDTSIDLPEATCLIQISSHYGSRRQEAQRLGRILRAKR-RNDEGFNAFFYSL 708 Query: 663 VSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEE-EDLAFSTKEEQQQLLQKVL---- 717 VS+DTQEM YSTKRQ FLVDQGY+FKVIT L GME +LA+++ E+++LLQ+VL Sbjct: 709 VSKDTQEMYYSTKRQAFLVDQGYAFKVITHLHGMENIPNLAYASPRERRELLQEVLLKNE 768 Query: 718 --AATDL--DAEEEVVAGEFGSR--SSQASRRFGTMSSMSGADDTVYMEYHSSRSKAPSK 771 A ++ DA+ V G G + S+A R G++S ++G +D YMEY ++++K + Sbjct: 769 EAAGIEVGDDADNSVGRGSNGHKRFKSKAVRGEGSLSGLAGGEDMAYMEYSTNKNKELKE 828 Query: 772 HVHPLFKRF 780 H HPL ++ Sbjct: 829 H-HPLIRKM 836 >5OQJ-7 nrPDB Length = 843 Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/729 (54%), Positives = 514/729 (70%), Gaps = 30/729 (4%) Query: 67 LKDDHTSRPLWVAP-DGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTAYSLYA 125 L+ DH SRPLW++P DG I LE+FSP+ + AQDFLV IAEP+ RP+H+HEYK+TAYSLYA Sbjct: 123 LRPDHASRPLWISPSDGRIILESFSPLAEQAQDFLVTIAEPISRPSHIHEYKITAYSLYA 182 Query: 126 AVSVGLQTSDITEYLRKLSKTGVPDGIMQFIKLCTVSYGKVKLVLKHNRYFVESCHPDVI 185 AVSVGL+T DI L +LSK V + I+ FIK T+SYGKVKLV+KHNRYFVE+ D++ Sbjct: 183 AVSVGLETDDIISVLDRLSKVPVAESIINFIKGATISYGKVKLVIKHNRYFVETTQADIL 242 Query: 186 QHLLQDPVIRECRL-RNSEGEATELITETFTSKSAISKTAESSGGPSTSRVTDPQGKSDI 244 Q LL D VI R+ + + + E + + + +++G P+T+ +P +D+ Sbjct: 243 QMLLNDSVIGPLRIDSDHQVQPPEDVLQ--------QQLQQTAGKPATN--VNP---NDV 289 Query: 245 PMDLFDFYEQMDKDEEEEEETQTV-SFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVN 303 ++ EEE+++ V SFE+ E +E ++KRC ++YP+L EYDFRND N Sbjct: 290 EAVFSAVIGGDNEREEEDDDIDAVHSFEIANESVEVVKKRCQEIDYPVLEEYDFRNDHRN 349 Query: 304 PDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLV 363 PD++IDLKP+ +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TAACT++K +V Sbjct: 350 PDLDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIV 409 Query: 364 LGNSAVSVEQWKAQF-KMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWE 422 L S+VSV QW+ QF + +STYSM+ + Sbjct: 410 LCTSSVSVMQWRQQFLXXXXXXXXXXXXXXXXXXXXXXXXXXLVVSTYSMVANXXXXXXX 469 Query: 423 AERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNF 482 WG +ILDEVH +PA MFRRV++ + AH KLGLTATLVREDDKI DLNF Sbjct: 470 XXXXXXXXXXXXWGFIILDEVHVVPAAMFRRVVSTIAAHAKLGLTATLVREDDKIGDLNF 529 Query: 483 LIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFR 542 LIGPKLYEANWMEL G+IA VQCAEVWCPM+ EFY+EY+ +KR+LLY MNP KF+ Sbjct: 530 LIGPKLYEANWMELSQKGHIANVQCAEVWCPMTAEFYQEYLRETARKRMLLYIMNPTKFQ 589 Query: 543 ACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKI 602 ACQFLI++HERR DKIIVF+DNV+AL+EYA+++ KP+IYG T Q ERM ILQNF++N +I Sbjct: 590 ACQFLIQYHERRGDKIIVFSDNVYALQEYALKMGKPFIYGSTPQQERMNILQNFQYNDQI 649 Query: 603 NTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSL 662 NTIF+SKVGDTS DLPEA LIQISSH GSRRQEAQRLGR+LRAK+ E +NAFFYSL Sbjct: 650 NTIFLSKVGDTSIDLPEATCLIQISSHYGSRRQEAQRLGRILRAKR-RNDEGFNAFFYSL 708 Query: 663 VSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEE-EDLAFSTKEEQQQLLQKVL---- 717 VS+DTQEM YSTKRQ FLVDQGY+FKVIT L GME +LA+++ E+++LLQ+VL Sbjct: 709 VSKDTQEMYYSTKRQAFLVDQGYAFKVITHLHGMENIPNLAYASPRERRELLQEVLLKNE 768 Query: 718 --AATDL--DAEEEVVAGEFGSR--SSQASRRFGTMSSMSGADDTVYMEYHSSRSKAPSK 771 A ++ DA+ V G G + S+A R G++S ++G +D YMEY ++++K + Sbjct: 769 EAAGIEVGDDADNSVGRGSNGHKRFKSKAVRGEGSLSGLAGGEDMAYMEYSTNKNKELKE 828 Query: 772 HVHPLFKRF 780 H HPL ++ Sbjct: 829 H-HPLIRKM 836 >5FMF-1 nrPDB Length = 492 Score = 628 bits (1620), Expect = e-180, Method: Compositional matrix adjust. Identities = 298/462 (64%), Positives = 369/462 (79%), Gaps = 3/462 (0%) Query: 269 SFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMF 328 SFE+ E +E ++KRC ++YP+L EYDFRND NPD++IDLKP+ +RPYQEKSL KMF Sbjct: 22 SFEIANESVEVVKKRCQEIDYPVLEEYDFRNDHRNPDLDIDLKPSTQIRPYQEKSLSKMF 81 Query: 329 GNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQ 388 GNGRARSG+IVLPCGAGK+LVG+TAACT++K +VL S+VSV QW+ QF W T+ Sbjct: 82 GNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLCTSSVSVMQWRQQFLQWCTLQPEN 141 Query: 389 ICRFTSDAKDK-PIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTIP 447 FTSD K+ + +STYSM+ +T RS ++++VM++L +EWG +ILDEVH +P Sbjct: 142 CAVFTSDNKEMFQTESGLVVSTYSMVANTRNRSHDSQKVMDFLTGREWGFIILDEVHVVP 201 Query: 448 AKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKVQC 507 A MFRRV++ + AH KLGLTATLVREDDKI DLNFLIGPKLYEANWMEL G+IA VQC Sbjct: 202 AAMFRRVVSTIAAHAKLGLTATLVREDDKIGDLNFLIGPKLYEANWMELSQKGHIANVQC 261 Query: 508 AEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNVFA 567 AEVWCPM+ EFY+EY+ +KR+LLY MNP KF+ACQFLI++HERR DKIIVF+DNV+A Sbjct: 262 AEVWCPMTAEFYQEYLRETARKRMLLYIMNPTKFQACQFLIQYHERRGDKIIVFSDNVYA 321 Query: 568 LKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQIS 627 L+EYA+++ KP+IYG T Q ERM ILQNF++N +INTIF+SKVGDTS DLPEA LIQIS Sbjct: 322 LQEYALKMGKPFIYGSTPQQERMNILQNFQYNDQINTIFLSKVGDTSIDLPEATCLIQIS 381 Query: 628 SHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSF 687 SH GSRRQEAQRLGR+LRAK+ E +NAFFYSLVS+DTQEM YSTKRQ FLVDQGY+F Sbjct: 382 SHYGSRRQEAQRLGRILRAKRRN-DEGFNAFFYSLVSKDTQEMYYSTKRQAFLVDQGYAF 440 Query: 688 KVITKLAGMEE-EDLAFSTKEEQQQLLQKVLAATDLDAEEEV 728 KVIT L GME +LA+++ E+++LLQ+VL + A EV Sbjct: 441 KVITHLHGMENIPNLAYASPRERRELLQEVLLKNEEAAGIEV 482 >4ERN-A nrPDB Length = 289 Score = 605 bits (1560), Expect = e-173, Method: Compositional matrix adjust. Identities = 289/289 (100%), Positives = 289/289 (100%) Query: 494 MELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHER 553 MELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHER Sbjct: 1 MELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHER 60 Query: 554 RNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDT 613 RNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDT Sbjct: 61 RNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDT 120 Query: 614 SFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYS 673 SFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYS Sbjct: 121 SFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYS 180 Query: 674 TKRQRFLVDQGYSFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAATDLDAEEEVVAGEF 733 TKRQRFLVDQGYSFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAATDLDAEEEVVAGEF Sbjct: 181 TKRQRFLVDQGYSFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAATDLDAEEEVVAGEF 240 Query: 734 GSRSSQASRRFGTMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRFRK 782 GSRSSQASRRFGTMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRFRK Sbjct: 241 GSRSSQASRRFGTMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRFRK 289 >2FWR-A nrPDB Length = 472 Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 120/447 (26%), Positives = 201/447 (44%), Gaps = 88/447 (19%) Query: 283 RCIHLEYPLLAEY------DFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSG 336 R + Y + EY +F +++ +P LR YQEK+L + + R G Sbjct: 55 RALAFRYRDIIEYFESNGIEFVDNAADPIPTPYFDAEISLRDYQEKALERWLVDKR---G 111 Query: 337 VIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDA 396 IVLP G+GK+ V + A + L++ + EQWK + ++ + + F+ Sbjct: 112 CIVLPTGSGKTHVAMAAINELSTPTLIVVPTLALAEQWKERLGIFG---EEYVGEFSGRI 168 Query: 397 KD-KPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVL 455 K+ KP+ S S Y AE++ + L+I DEVH +PA+ + ++ Sbjct: 169 KELKPLTVSTYDSAYV----------NAEKL-----GNRFMLLIFDEVHHLPAESYVQIA 213 Query: 456 TIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMS 515 + A +LGLTAT RED + L ++G K++E L ++AK ++ P++ Sbjct: 214 QMSIAPFRLGLTATFEREDGRHEILKEVVGGKVFELFPDSLAGK-HLAKYTIKRIFVPLA 272 Query: 516 PE----------FYREYV-------------------------------AIKTKKRILLY 534 + Y++++ A + +RI Sbjct: 273 EDERVEYEKREKVYKQFLRARGITLRRAEDFNKIVMASGYDERAYEALRAWEEARRIAFN 332 Query: 535 TMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNK----PYIYGPTSQGERM 590 + NK R + +++ H R DKII+F + E R++K P I TS+ ER Sbjct: 333 S--KNKIRKLREILERH--RKDKIIIFTRH----NELVYRISKVFLIPAITHRTSREERE 384 Query: 591 QILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGM 650 +IL+ F+ + I S+V D D+P+ANV + I S GS R+ QRLGR+LR KG Sbjct: 385 EILEGFR-TGRFRAIVSSQVLDEGIDVPDANVGV-IMSGSGSAREYIQRLGRILRPSKG- 441 Query: 651 VAEEYNAFFYSLVSQDTQEMAYSTKRQ 677 + A Y L+S+ T E+ + +R+ Sbjct: 442 ---KKEAVLYELISRGTGEVNTARRRK 465 >5TNU-A nrPDB Length = 459 Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 105/407 (25%), Positives = 180/407 (44%), Gaps = 82/407 (20%) Query: 316 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWK 375 LR YQ ++++ R G+IVLP GAGK+ V + ++ L++ + + QWK Sbjct: 89 LRDYQAEAVKAWLKEKR---GIIVLPTGAGKTQVALKIVSIMKVATLIVVPTIDLITQWK 145 Query: 376 AQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEW 435 + + D I +D G +V TY + + +E Sbjct: 146 ERINKYLDFDPGII----GGGEDSLKGITVI--TYDS---------------AYTRAEEL 184 Query: 436 G----LMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEA 491 G L+I DEVH +P++ + + + + +LGLTAT R+D K L+GP +Y Sbjct: 185 GNKFPLLIFDEVHHLPSEGYSIMAQLFASPYRLGLTATPERDDGKHELYPILVGPIVYRK 244 Query: 492 NWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYT-----MNPNKFR---- 542 + EL YIAK + +++ ++ E + Y ++ K + L + N + F Sbjct: 245 SVEELAGK-YIAKYKIKKLYVSLTNEEKKRYDGLRKKLKDFLSSRGLKLQNLDDFHRLVK 303 Query: 543 -------ACQFLIKFHER---------------------RNDKIIVFADNVFALKEYAIR 574 A + L+ +HE +N+KIIVF + + A R Sbjct: 304 LAAKDKEAREALLAWHESLNIAVNSQSKIEKLREILQEYKNEKIIVFTRDT----QMAYR 359 Query: 575 LNK----PYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHG 630 ++K P + T + ER +ILQ F+ + + I S V D D+P+A + I + + Sbjct: 360 ISKTFLIPVVTYKTDKDEREEILQKFR-DGEYRVIVASTVFDEGVDVPDATLAIVMGGY- 417 Query: 631 GSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQ 677 G++RQ QRLGR+LR K + A +V++ T + S +R+ Sbjct: 418 GTKRQFLQRLGRILRKK------DKEALLIEIVTKGTADYRLSRRRR 458 >2FZ4-A nrPDB Length = 237 Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 28/201 (13%) Query: 283 RCIHLEYPLLAEY------DFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSG 336 R + Y + EY +F +++ +P LR YQEK+L + + R G Sbjct: 55 RALAFRYRDIIEYFESNGIEFVDNAADPIPTPYFDAEISLRDYQEKALERWLVDKR---G 111 Query: 337 VIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDA 396 IVLP G+GK+ V + A + L++ + EQWK + ++ + + F+ Sbjct: 112 CIVLPTGSGKTHVAMAAINELSTPTLIVVPTLALAEQWKERLGIFG---EEYVGEFSGRI 168 Query: 397 KD-KPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVL 455 K+ KP+ S S Y AE++ + L+I DEVH +PA+ + ++ Sbjct: 169 KELKPLTVSTYDSAYV----------NAEKL-----GNRFMLLIFDEVHHLPAESYVQIA 213 Query: 456 TIVQAHCKLGLTATLVREDDK 476 + A +LGLTAT RED + Sbjct: 214 QMSIAPFRLGLTATFEREDGR 234 >1Z6A-A nrPDB Length = 500 Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 7/93 (7%) Query: 578 PYIYGPTSQGERMQILQNFKHNPKINTIFIS-KVGDTSFDLPEANVLIQISSHGGSRRQE 636 P++YG S+ ER I+ F++NP + I +S K G +L AN +I + E Sbjct: 370 PFLYGELSKKERDDIISKFQNNPSVKFIVLSVKAGGFGINLTSANRVIHF-DRWWNPAVE 428 Query: 637 AQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQE 669 Q RV R + + N + L+S T E Sbjct: 429 DQATDRVYR-----IGQTRNVIVHKLISVGTLE 456 Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust. Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 27/177 (15%) Query: 314 AVLRPYQEKSLRKM-FGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR-----CLVLGNS 367 A LRPYQ K M F N + G GK+L + +K LV+ Sbjct: 36 ANLRPYQIKGFSWMRFMNKLGFGICLADDMGLGKTLQTIAVFSDAKKENELTPSLVICPL 95 Query: 368 AVSVEQWKAQFKMWSTIDDSQICRFTSD-AKDKPIGCSVAISTYSMLGHTTKRSWEAERV 426 +V ++ W+ + ++ + F D +K K + ++TY++L T+ Sbjct: 96 SV-LKNWEEELSKFAP--HLRFAVFHEDRSKIKLEDYDIILTTYAVLLRDTR-------- 144 Query: 427 MEWLKTQEWGLMILDEVHTIP---AKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL 480 LK EW +++DE I K+F+ V + ++ ++ LT T + ++K+ DL Sbjct: 145 ---LKEVEWKYIVIDEAQNIKNPQTKIFKAVKEL-KSKYRIALTGTPI--ENKVDDL 195 >1Z5Z-A nrPDB Length = 271 Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 7/93 (7%) Query: 578 PYIYGPTSQGERMQILQNFKHNPKINTIFIS-KVGDTSFDLPEANVLIQISSHGGSRRQE 636 P++YG S+ ER I+ F++NP + I +S K G +L AN +I + E Sbjct: 141 PFLYGELSKKERDDIISKFQNNPSVKFIVLSVKAGGFGINLTSANRVIHF-DRWWNPAVE 199 Query: 637 AQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQE 669 Q RV R + + N + L+S T E Sbjct: 200 DQATDRVYR-----IGQTRNVIVHKLISVGTLE 227 >2ZJ8-A nrPDB Length = 720 Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 37/172 (21%) Query: 318 PYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKA- 376 P Q ++L+ G ++ +I +P +GK+L+ A + R L G AV + KA Sbjct: 26 PPQAEALKS--GILEGKNALISIPTASGKTLI---AEIAMVHRILTQGGKAVYIVPLKAL 80 Query: 377 ------QFKMWSTIDDSQICRFTSD--AKDKPIG-CSVAISTY----SMLGHTTKRSWEA 423 +F+ W I ++ T D +KD+ +G + I+T S+L H + Sbjct: 81 AEEKFQEFQDWEKIG-LRVAMATGDYDSKDEWLGKYDIIIATAEKFDSLLRHGSS----- 134 Query: 424 ERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCK-----LGLTATL 470 W+K + +++ DE+H I ++ L ++ AH +GL+AT+ Sbjct: 135 -----WIKDVK--ILVADEIHLIGSRDRGATLEVILAHMLGKAQIIGLSATI 179 >3B6E-A nrPDB Length = 216 Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 28/153 (18%) Query: 311 KPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAA---------CTVRKRC 361 +P LRPYQ + + ++ +I LP G+GK+ V V A + + Sbjct: 29 EPELQLRPYQMEVAQPAL---EGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKV 85 Query: 362 LVLGNSAVSVEQ-WKAQF----KMWSTI----DDSQI-CRFTSDAKDKPIGCSVAISTYS 411 +VL N + VEQ ++ +F K W + D+Q+ F K C + IST Sbjct: 86 IVLVNKVLLVEQLFRKEFQPFLKKWYRVIGLSGDTQLKISFPEVVK----SCDIIISTAQ 141 Query: 412 MLGHTTKRSWEAERVMEWLKTQEWGLMILDEVH 444 +L ++ E ++ ++ L+I+DE H Sbjct: 142 ILENSLLNLENGEDA--GVQLSDFSLIIIDECH 172 >5JXR-A nrPDB Length = 723 Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust. Identities = 40/192 (20%), Positives = 78/192 (40%), Gaps = 35/192 (18%) Query: 314 AVLRPYQEKSLRKMFG-NGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSV- 371 +R YQ L + + SG++ G GK+L + +R + G V+V Sbjct: 104 GTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTIAFLGYLRHIMGITGPHLVTVP 163 Query: 372 ----EQWKAQFKMWSTIDDSQICRFTSDAKDKPIG-------CSVAISTYSML----GHT 416 + WK +F+ W+ + + + + + + I V I++Y M+ H Sbjct: 164 KSTLDNWKREFEKWTPEVNVLVLQGAKEERHQLINDRLVDENFDVCITSYEMILREKAHL 223 Query: 417 TKRSWEAERVMEWLKTQEWGLMILDEVHTIPAK--MFRRVLTIVQAHCKLGLTATLVRED 474 K +WE +I+DE H I + +V+ + + +L +T T ++ + Sbjct: 224 KKFAWE--------------YIIIDEAHRIKNEESSLAQVIRMFNSRNRLLITGTPLQNN 269 Query: 475 --DKIVDLNFLI 484 + LNFL+ Sbjct: 270 LHELWALLNFLL 281 >3H1T-A nrPDB Length = 590 Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust. Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 5/77 (6%) Query: 437 LMILDEVHTIPAK---MFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANW 493 L+I+DE H A+ +R +L + ++G+TAT +RED++ D G +Y + Sbjct: 305 LIIIDECHRGSARDNSNWREILEYFEPAFQIGMTATPLREDNR--DTYRYFGNPIYTYSL 362 Query: 494 MELQNNGYIAKVQCAEV 510 + ++G++A + V Sbjct: 363 RQGIDDGFLAPYRVHRV 379 >4GL2-A nrPDB Length = 699 Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 28/148 (18%) Query: 316 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAA---------CTVRKRCLVLGN 366 LRPYQ + + ++ +I LP G GK+ V V A + + +VL N Sbjct: 8 LRPYQMEVAQPAL---EGKNIIICLPTGCGKTRVAVYIAKDHLDKKKKASEPGKVIVLVN 64 Query: 367 SAVSVEQ-WKAQF----KMWSTI----DDSQI-CRFTSDAKDKPIGCSVAISTYSMLGHT 416 + VEQ ++ +F K W + D+Q+ F K C + IST +L ++ Sbjct: 65 KVLLVEQLFRKEFQPFLKKWYRVIGLSGDTQLKISFPEVVK----SCDIIISTAQILENS 120 Query: 417 TKRSWEAERVMEWLKTQEWGLMILDEVH 444 E ++ ++ L+I+DE H Sbjct: 121 LLNLENGEDA--GVQLSDFSLIIIDECH 146 Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust. Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Query: 581 YGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQ 625 + P +Q E+ +++ F+ KIN + + V + D+ E N++I+ Sbjct: 445 FKPMTQNEQKEVISKFR-TGKINLLIATTVAEEGLDIKECNIVIR 488 >1R6B-X nrPDB Length = 758 Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 22/159 (13%) Query: 86 LEAFSPVYKYAQDFLVAIAEPV-----CRPTHVHEYKLTAYSLYAAVSVGLQTSDITEYL 140 +EA + K A+ L +PV PT V + ++T L A+ + L D++EY+ Sbjct: 467 IEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTV-QLSKALGIELLRFDMSEYM 525 Query: 141 RKLSKT---GVPDGIMQFIKLCTVSYGKVKLVLKHNRYF-----VESCHPDVIQHLLQDP 192 + + + G P G + F + ++ V+KH +E HPDV LLQ Sbjct: 526 ERHTVSRLIGAPPGYVGFDQGGLLTDA----VIKHPHAVLLLDEIEKAHPDVFNILLQ-- 579 Query: 193 VIRECRLRNSEGEATEL--ITETFTSKSAISKTAESSGG 229 V+ L ++ G + + T+ + + +T S G Sbjct: 580 VMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIG 618 >1Y07-A nrPDB Length = 128 Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 22/35 (62%) Query: 499 NGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILL 533 +G+ KV+ V PM+PE Y +V +KT+K I L Sbjct: 57 HGHEVKVKVGSVAHPMTPEHYIAWVCLKTRKGIQL 91 >5JBJ-A nrPDB Length = 680 Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 30/131 (22%) Query: 332 RARSGVIVLPCGAGKSLVGVTAACTVRKRCL---------VLGNSAVSVEQ--------W 374 R R+ ++ LP GAGK+ AA V +R L VL N V+Q Sbjct: 22 RGRNSIVWLPTGAGKT----RAAVHVCRRHLEGRRGGRVAVLVNKVHLVQQHLEKEFHVL 77 Query: 375 KAQFKMWS-TIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQ 433 + FK+ + + D S C F AK G V I T +L + E RV + Sbjct: 78 RDAFKVTAVSGDSSHKCFFGQLAK----GSDVVICTAQILQNALLSGEEEARV----ELT 129 Query: 434 EWGLMILDEVH 444 ++ L+++DE H Sbjct: 130 DFSLLVIDECH 140 Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust. Identities = 10/41 (24%), Positives = 26/41 (63%), Gaps = 1/41 (2%) Query: 585 SQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQ 625 +Q E+ ++ F++ ++N +F + V + D+PE N++++ Sbjct: 420 TQNEQQDVITLFRYG-ELNLLFSTSVAEEGLDIPECNIVVR 459 >4NSC-A nrPDB Length = 401 Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 59/149 (39%), Gaps = 14/149 (9%) Query: 130 GLQTSDITEYLRKLSKTGVPDGIMQ-FIKLCTVSYGKVKLVLKHNRYFVESCHPDVIQ-- 186 G + + EY ++ PD I + F L +S V FV S P+ Q Sbjct: 30 GFRDRKVMEYENRIRAYSTPDKIFRYFATLKVISEPGEAEVFMTPEDFVRSITPNEKQPE 89 Query: 187 HLLQDPVIRECRLRNSEGEATELITETFTSKSAISKTAESSGGPS-------TSRVTDPQ 239 HL D I ++ +G+ E F + +I T G S T+ ++ PQ Sbjct: 90 HLGLDQYI----IKRFDGKKISQEREKFADEGSIFYTLGECGLISFSDYIFLTTVLSTPQ 145 Query: 240 GKSDIPMDLFDFYEQMDKDEEEEEETQTV 268 +I +FD + D EE E+ Q++ Sbjct: 146 RNFEIAFKMFDLNGDGEVDMEEFEQVQSI 174 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5IY9-V nrPDB 1346 0.0 6NMI-A nrPDB 1106 0.0 5SVA-Z nrPDB 1082 0.0 5OQJ-7 nrPDB 1013 0.0 5OF4-A nrPDB 870 0.0 5FMF-1 nrPDB 756 0.0 4ERN-A nrPDB 488 e-138 2FWR-A nrPDB 429 e-120 5TNU-A nrPDB 369 e-102 2FZ4-A nrPDB 241 9e-64 Sequences not found previously or not previously below threshold: 1Z6A-A nrPDB 81 2e-15 2ZJ8-A nrPDB 57 3e-08 3B6E-A nrPDB 56 6e-08 3H1T-A nrPDB 54 3e-07 1Z5Z-A nrPDB 54 4e-07 1WP9-A nrPDB 51 2e-06 4GL2-A nrPDB 50 4e-06 5JXR-A nrPDB 49 1e-05 1GM5-A nrPDB 49 1e-05 6G19-A nrPDB 48 2e-05 2HYI-C nrPDB 48 2e-05 5JCF-A nrPDB 46 6e-05 4KBG-A nrPDB 46 7e-05 4W7S-A nrPDB 44 2e-04 2Z0M-A nrPDB 44 3e-04 5ZWN-y nrPDB 44 3e-04 5LST-A nrPDB 44 3e-04 2NMV-A nrPDB 43 6e-04 3TBK-A nrPDB 42 0.001 1D9Z-A nrPDB 42 0.001 5JBJ-A nrPDB 41 0.002 1OYY-A nrPDB 41 0.002 4D25-A nrPDB 41 0.003 2VSX-A nrPDB 40 0.004 6BOG-A nrPDB 40 0.004 5DTU-A nrPDB 40 0.004 2VA8-A nrPDB 38 0.014 4ON9-A nrPDB 38 0.018 4A2W-A nrPDB 37 0.035 4A2Q-A nrPDB 37 0.036 4BPB-A nrPDB 36 0.054 1YKS-A nrPDB 36 0.081 1C4O-A nrPDB 34 0.22 4A36-A nrPDB 34 0.22 3CRV-A nrPDB 34 0.25 3I62-A nrPDB 32 0.77 3SQW-A nrPDB 32 0.84 6FTX-W nrPDB 32 1.4 6C90-A nrPDB 31 1.6 4GGP-A nrPDB 31 1.7 3P4X-A nrPDB 31 1.7 4P9G-A nrPDB 31 1.7 5OFK-A nrPDB 31 2.2 3MWY-W nrPDB 31 2.4 4G8T-A nrPDB 30 4.3 1R6B-X nrPDB 30 5.0 3ZUQ-A nrPDB 30 5.4 2XHL-B nrPDB 30 5.4 4MWI-A nrPDB 29 5.9 6C9M-B nrPDB 29 7.3 >5IY9-V nrPDB Length = 782 Score = 1346 bits (3484), Expect = 0.0, Method: Composition-based stats. Identities = 782/782 (100%), Positives = 782/782 (100%) Query: 1 MGKRDRADRDKKKSRKRHYEDEEDDEEDAPGNDPQEAVPSAAGKQVDESGTKVDEYGAKD 60 MGKRDRADRDKKKSRKRHYEDEEDDEEDAPGNDPQEAVPSAAGKQVDESGTKVDEYGAKD Sbjct: 1 MGKRDRADRDKKKSRKRHYEDEEDDEEDAPGNDPQEAVPSAAGKQVDESGTKVDEYGAKD 60 Query: 61 YRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTA 120 YRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTA Sbjct: 61 YRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTA 120 Query: 121 YSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIMQFIKLCTVSYGKVKLVLKHNRYFVESC 180 YSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIMQFIKLCTVSYGKVKLVLKHNRYFVESC Sbjct: 121 YSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIMQFIKLCTVSYGKVKLVLKHNRYFVESC 180 Query: 181 HPDVIQHLLQDPVIRECRLRNSEGEATELITETFTSKSAISKTAESSGGPSTSRVTDPQG 240 HPDVIQHLLQDPVIRECRLRNSEGEATELITETFTSKSAISKTAESSGGPSTSRVTDPQG Sbjct: 181 HPDVIQHLLQDPVIRECRLRNSEGEATELITETFTSKSAISKTAESSGGPSTSRVTDPQG 240 Query: 241 KSDIPMDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRND 300 KSDIPMDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRND Sbjct: 241 KSDIPMDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRND 300 Query: 301 SVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR 360 SVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR Sbjct: 301 SVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR 360 Query: 361 CLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRS 420 CLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRS Sbjct: 361 CLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRS 420 Query: 421 WEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL 480 WEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL Sbjct: 421 WEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL 480 Query: 481 NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK 540 NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK Sbjct: 481 NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK 540 Query: 541 FRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP 600 FRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP Sbjct: 541 FRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP 600 Query: 601 KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFY 660 KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFY Sbjct: 601 KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFY 660 Query: 661 SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAAT 720 SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAAT Sbjct: 661 SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAAT 720 Query: 721 DLDAEEEVVAGEFGSRSSQASRRFGTMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRF 780 DLDAEEEVVAGEFGSRSSQASRRFGTMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRF Sbjct: 721 DLDAEEEVVAGEFGSRSSQASRRFGTMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRF 780 Query: 781 RK 782 RK Sbjct: 781 RK 782 >6NMI-A nrPDB Length = 653 Score = 1106 bits (2861), Expect = 0.0, Method: Composition-based stats. Identities = 634/697 (90%), Positives = 635/697 (91%), Gaps = 44/697 (6%) Query: 34 PQEAVPSAAGKQVDESGTKVDEYGAKDYRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVY 93 PQEAVPSAAGKQVDESGTKVDEYGAKDYRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVY Sbjct: 1 PQEAVPSAAGKQVDESGTKVDEYGAKDYRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVY 60 Query: 94 KYAQDFLVAIAEPVCRPTHVHEYKLTAYSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIM 153 KYAQDFLVAIAEPVCRPTHVHEYKLTAYSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIM Sbjct: 61 KYAQDFLVAIAEPVCRPTHVHEYKLTAYSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIM 120 Query: 154 QFIKLCTVSYGKVKLVLKHNRYFVESCHPDVIQHLLQDPVIRECRLRNSEGEATELITET 213 QFIKLCTVSYGKVKLVLKHNRYFVESCHPDVIQHLLQDPVIRECRLRNSE Sbjct: 121 QFIKLCTVSYGKVKLVLKHNRYFVESCHPDVIQHLLQDPVIRECRLRNSEXXXXXXXXXX 180 Query: 214 FTSKSAISKTAESSGGPSTSRVTDPQGKSDIPMDLFDFYEQMDKDEEEEEETQTVSFEVK 273 +T VSFEVK Sbjct: 181 XXXXXXXXQT--------------------------------------------VSFEVK 196 Query: 274 QEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRA 333 QEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRA Sbjct: 197 QEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRA 256 Query: 334 RSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFT 393 RSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFT Sbjct: 257 RSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFT 316 Query: 394 SDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTIPAKMFRR 453 SDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTIPAKMFRR Sbjct: 317 SDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTIPAKMFRR 376 Query: 454 VLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCP 513 VLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCP Sbjct: 377 VLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCP 436 Query: 514 MSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAI 573 MSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAI Sbjct: 437 MSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAI 496 Query: 574 RLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSR 633 RLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSR Sbjct: 497 RLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSR 556 Query: 634 RQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKL 693 RQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKL Sbjct: 557 RQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKL 616 Query: 694 AGMEEEDLAFSTKEEQQQLLQKVLAATDLDAEEEVVA 730 AGMEEEDLAFSTKEEQQQLLQKVLAATDLDAEEEVVA Sbjct: 617 AGMEEEDLAFSTKEEQQQLLQKVLAATDLDAEEEVVA 653 >5SVA-Z nrPDB Length = 843 Score = 1082 bits (2798), Expect = 0.0, Method: Composition-based stats. Identities = 421/795 (52%), Positives = 559/795 (70%), Gaps = 43/795 (5%) Query: 3 KRDRADRDKKKSRKRHYEDEEDDE--EDAPGNDPQEAVPSAAGKQVDESGTKVDEYGAKD 60 K+ ++ R + D +D +D + P + VP + SG + + D Sbjct: 68 KKTKSSRHTAADSSMNQMDAKDKALLQDTNSDIPADFVPDSV------SGM----FRSHD 117 Query: 61 YRLQMPLKDDHTSRPLWVAP-DGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLT 119 + + L+ DH SRPLW++P DG I LE+FSP+ + AQDFLV IAEP+ RP+H+HEYK+T Sbjct: 118 FSY-LRLRPDHASRPLWISPSDGRIILESFSPLAEQAQDFLVTIAEPISRPSHIHEYKIT 176 Query: 120 AYSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIMQFIKLCTVSYGKVKLVLKHNRYFVES 179 AYSLYAAVSVGL+T DI L +LSK V + I+ FIK T+SYGKVKLV+KHNRYFVE+ Sbjct: 177 AYSLYAAVSVGLETDDIISVLDRLSKVPVAESIINFIKGATISYGKVKLVIKHNRYFVET 236 Query: 180 CHPDVIQHLLQDPVIRECRL-RNSEGEATELITETFTSKSAISKTAESSGGPSTSRVTDP 238 D++Q LL D VI R+ + + + E + + + +++G P+T+ +P Sbjct: 237 TQADILQMLLNDSVIGPLRIDSDHQVQPPEDVLQ--------QQLQQTAGKPATN--VNP 286 Query: 239 QGKSDIPMDLFDFYEQMDKDEEEEEETQTV-SFEVKQEMIEELQKRCIHLEYPLLAEYDF 297 +D+ ++ EEE+++ V SFE+ E +E ++KRC ++YP+L EYDF Sbjct: 287 ---NDVEAVFSAVIGGDNEREEEDDDIDAVHSFEIANESVEVVKKRCQEIDYPVLEEYDF 343 Query: 298 RNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTV 357 RND NPD++IDLKP+ +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TAACT+ Sbjct: 344 RNDHRNPDLDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTI 403 Query: 358 RKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDK-PIGCSVAISTYSMLGHT 416 +K +VL S+VSV QW+ QF W T+ FTSD K+ + +STYSM+ +T Sbjct: 404 KKSVIVLCTSSVSVMQWRQQFLQWCTLQPENCAVFTSDNKEMFQTESGLVVSTYSMVANT 463 Query: 417 TKRSWEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDK 476 RS ++++VM++L +EWG +ILDEVH +PA MFRRV++ + AH KLGLTATLVREDDK Sbjct: 464 RNRSHDSQKVMDFLTGREWGFIILDEVHVVPAAMFRRVVSTIAAHAKLGLTATLVREDDK 523 Query: 477 IVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTM 536 I DLNFLIGPKLYEANWMEL G+IA VQCAEVWCPM+ EFY+EY+ +KR+LLY M Sbjct: 524 IGDLNFLIGPKLYEANWMELSQKGHIANVQCAEVWCPMTAEFYQEYLRETARKRMLLYIM 583 Query: 537 NPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNF 596 NP KF+ACQFLI++HERR DKIIVF+DNV+AL+EYA+++ KP+IYG T Q ERM ILQNF Sbjct: 584 NPTKFQACQFLIQYHERRGDKIIVFSDNVYALQEYALKMGKPFIYGSTPQQERMNILQNF 643 Query: 597 KHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYN 656 ++N +INTIF+SKVGDTS DLPEA LIQISSH GSRRQEAQRLGR+LRAK+ E +N Sbjct: 644 QYNDQINTIFLSKVGDTSIDLPEATCLIQISSHYGSRRQEAQRLGRILRAKR-RNDEGFN 702 Query: 657 AFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEE-EDLAFSTKEEQQQLLQK 715 AFFYSLVS+DTQEM YSTKRQ FLVDQGY+FKVIT L GME +LA+++ E+++LLQ+ Sbjct: 703 AFFYSLVSKDTQEMYYSTKRQAFLVDQGYAFKVITHLHGMENIPNLAYASPRERRELLQE 762 Query: 716 VLAATDL--------DAEEEVVAGEFGSR--SSQASRRFGTMSSMSGADDTVYMEYHSSR 765 VL + DA+ V G G + S+A R G++S ++G +D YMEY +++ Sbjct: 763 VLLKNEEAAGIEVGDDADNSVGRGSNGHKRFKSKAVRGEGSLSGLAGGEDMAYMEYSTNK 822 Query: 766 SKAPSKHVHPLFKRF 780 +K +H HPL ++ Sbjct: 823 NKELKEH-HPLIRKM 836 >5OQJ-7 nrPDB Length = 843 Score = 1013 bits (2620), Expect = 0.0, Method: Composition-based stats. Identities = 407/795 (51%), Positives = 536/795 (67%), Gaps = 43/795 (5%) Query: 3 KRDRADRDKKKSRKRHYEDEEDDE--EDAPGNDPQEAVPSAAGKQVDESGTKVDEYGAKD 60 K+ ++ R + D +D +D + P + VP + SG + + D Sbjct: 68 KKTKSSRHTAADSSMNQMDAKDKALLQDTNSDIPADFVPDSV------SGM----FRSHD 117 Query: 61 YRLQMPLKDDHTSRPLWVAP-DGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLT 119 + + L+ DH SRPLW++P DG I LE+FSP+ + AQDFLV IAEP+ RP+H+HEYK+T Sbjct: 118 FSY-LRLRPDHASRPLWISPSDGRIILESFSPLAEQAQDFLVTIAEPISRPSHIHEYKIT 176 Query: 120 AYSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIMQFIKLCTVSYGKVKLVLKHNRYFVES 179 AYSLYAAVSVGL+T DI L +LSK V + I+ FIK T+SYGKVKLV+KHNRYFVE+ Sbjct: 177 AYSLYAAVSVGLETDDIISVLDRLSKVPVAESIINFIKGATISYGKVKLVIKHNRYFVET 236 Query: 180 CHPDVIQHLLQDPVIRECRL-RNSEGEATELITETFTSKSAISKTAESSGGPSTSRVTDP 238 D++Q LL D VI R+ + + + E + + + +++G P+T+ +P Sbjct: 237 TQADILQMLLNDSVIGPLRIDSDHQVQPPEDVLQ--------QQLQQTAGKPATN--VNP 286 Query: 239 QGKSDIPMDLFDFYEQMDKDEEEEEETQTV-SFEVKQEMIEELQKRCIHLEYPLLAEYDF 297 +D+ ++ EEE+++ V SFE+ E +E ++KRC ++YP+L EYDF Sbjct: 287 ---NDVEAVFSAVIGGDNEREEEDDDIDAVHSFEIANESVEVVKKRCQEIDYPVLEEYDF 343 Query: 298 RNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTV 357 RND NPD++IDLKP+ +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TAACT+ Sbjct: 344 RNDHRNPDLDIDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTI 403 Query: 358 RKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCS-VAISTYSMLGHT 416 +K +VL S+VSV QW+ QF + +STYSM+ + Sbjct: 404 KKSVIVLCTSSVSVMQWRQQFLXXXXXXXXXXXXXXXXXXXXXXXXXXLVVSTYSMVANX 463 Query: 417 TKRSWEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDK 476 WG +ILDEVH +PA MFRRV++ + AH KLGLTATLVREDDK Sbjct: 464 XXXXXXXXXXXXXXXXXXWGFIILDEVHVVPAAMFRRVVSTIAAHAKLGLTATLVREDDK 523 Query: 477 IVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTM 536 I DLNFLIGPKLYEANWMEL G+IA VQCAEVWCPM+ EFY+EY+ +KR+LLY M Sbjct: 524 IGDLNFLIGPKLYEANWMELSQKGHIANVQCAEVWCPMTAEFYQEYLRETARKRMLLYIM 583 Query: 537 NPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNF 596 NP KF+ACQFLI++HERR DKIIVF+DNV+AL+EYA+++ KP+IYG T Q ERM ILQNF Sbjct: 584 NPTKFQACQFLIQYHERRGDKIIVFSDNVYALQEYALKMGKPFIYGSTPQQERMNILQNF 643 Query: 597 KHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYN 656 ++N +INTIF+SKVGDTS DLPEA LIQISSH GSRRQEAQRLGR+LRAK+ E +N Sbjct: 644 QYNDQINTIFLSKVGDTSIDLPEATCLIQISSHYGSRRQEAQRLGRILRAKR-RNDEGFN 702 Query: 657 AFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEE-EDLAFSTKEEQQQLLQK 715 AFFYSLVS+DTQEM YSTKRQ FLVDQGY+FKVIT L GME +LA+++ E+++LLQ+ Sbjct: 703 AFFYSLVSKDTQEMYYSTKRQAFLVDQGYAFKVITHLHGMENIPNLAYASPRERRELLQE 762 Query: 716 VLAATDL--------DAEEEVVAGEFGSR--SSQASRRFGTMSSMSGADDTVYMEYHSSR 765 VL + DA+ V G G + S+A R G++S ++G +D YMEY +++ Sbjct: 763 VLLKNEEAAGIEVGDDADNSVGRGSNGHKRFKSKAVRGEGSLSGLAGGEDMAYMEYSTNK 822 Query: 766 SKAPSKHVHPLFKRF 780 +K +H HPL ++ Sbjct: 823 NKELKEH-HPLIRKM 836 >5OF4-A nrPDB Length = 553 Score = 870 bits (2248), Expect = 0.0, Method: Composition-based stats. Identities = 517/517 (100%), Positives = 517/517 (100%) Query: 266 QTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKSLR 325 QTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKSLR Sbjct: 37 QTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKSLR 96 Query: 326 KMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTID 385 KMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTID Sbjct: 97 KMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTID 156 Query: 386 DSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHT 445 DSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHT Sbjct: 157 DSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHT 216 Query: 446 IPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKV 505 IPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKV Sbjct: 217 IPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKV 276 Query: 506 QCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNV 565 QCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNV Sbjct: 277 QCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNV 336 Query: 566 FALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQ 625 FALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQ Sbjct: 337 FALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQ 396 Query: 626 ISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGY 685 ISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGY Sbjct: 397 ISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGY 456 Query: 686 SFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAATDLDAEEEVVAGEFGSRSSQASRRFG 745 SFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAATDLDAEEEVVAGEFGSRSSQASRRFG Sbjct: 457 SFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAATDLDAEEEVVAGEFGSRSSQASRRFG 516 Query: 746 TMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRFRK 782 TMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRFRK Sbjct: 517 TMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRFRK 553 >5FMF-1 nrPDB Length = 492 Score = 756 bits (1952), Expect = 0.0, Method: Composition-based stats. Identities = 302/484 (62%), Positives = 378/484 (78%), Gaps = 4/484 (0%) Query: 249 FDFYEQMDKDEEEEEETQTV-SFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDIN 307 ++ EEE+++ V SFE+ E +E ++KRC ++YP+L EYDFRND NPD++ Sbjct: 1 SAVIGGDNEREEEDDDIDAVHSFEIANESVEVVKKRCQEIDYPVLEEYDFRNDHRNPDLD 60 Query: 308 IDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNS 367 IDLKP+ +RPYQEKSL KMFGNGRARSG+IVLPCGAGK+LVG+TAACT++K +VL S Sbjct: 61 IDLKPSTQIRPYQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLCTS 120 Query: 368 AVSVEQWKAQFKMWSTIDDSQICRFTSDAKDK-PIGCSVAISTYSMLGHTTKRSWEAERV 426 +VSV QW+ QF W T+ FTSD K+ + +STYSM+ +T RS ++++V Sbjct: 121 SVSVMQWRQQFLQWCTLQPENCAVFTSDNKEMFQTESGLVVSTYSMVANTRNRSHDSQKV 180 Query: 427 MEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGP 486 M++L +EWG +ILDEVH +PA MFRRV++ + AH KLGLTATLVREDDKI DLNFLIGP Sbjct: 181 MDFLTGREWGFIILDEVHVVPAAMFRRVVSTIAAHAKLGLTATLVREDDKIGDLNFLIGP 240 Query: 487 KLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQF 546 KLYEANWMEL G+IA VQCAEVWCPM+ EFY+EY+ +KR+LLY MNP KF+ACQF Sbjct: 241 KLYEANWMELSQKGHIANVQCAEVWCPMTAEFYQEYLRETARKRMLLYIMNPTKFQACQF 300 Query: 547 LIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIF 606 LI++HERR DKIIVF+DNV+AL+EYA+++ KP+IYG T Q ERM ILQNF++N +INTIF Sbjct: 301 LIQYHERRGDKIIVFSDNVYALQEYALKMGKPFIYGSTPQQERMNILQNFQYNDQINTIF 360 Query: 607 ISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQD 666 +SKVGDTS DLPEA LIQISSH GSRRQEAQRLGR+LRAK+ E +NAFFYSLVS+D Sbjct: 361 LSKVGDTSIDLPEATCLIQISSHYGSRRQEAQRLGRILRAKR-RNDEGFNAFFYSLVSKD 419 Query: 667 TQEMAYSTKRQRFLVDQGYSFKVITKLAGMEE-EDLAFSTKEEQQQLLQKVLAATDLDAE 725 TQEM YSTKRQ FLVDQGY+FKVIT L GME +LA+++ E+++LLQ+VL + A Sbjct: 420 TQEMYYSTKRQAFLVDQGYAFKVITHLHGMENIPNLAYASPRERRELLQEVLLKNEEAAG 479 Query: 726 EEVV 729 EV Sbjct: 480 IEVG 483 >4ERN-A nrPDB Length = 289 Score = 488 bits (1256), Expect = e-138, Method: Composition-based stats. Identities = 289/289 (100%), Positives = 289/289 (100%) Query: 494 MELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHER 553 MELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHER Sbjct: 1 MELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHER 60 Query: 554 RNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDT 613 RNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDT Sbjct: 61 RNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDT 120 Query: 614 SFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYS 673 SFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYS Sbjct: 121 SFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYS 180 Query: 674 TKRQRFLVDQGYSFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAATDLDAEEEVVAGEF 733 TKRQRFLVDQGYSFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAATDLDAEEEVVAGEF Sbjct: 181 TKRQRFLVDQGYSFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAATDLDAEEEVVAGEF 240 Query: 734 GSRSSQASRRFGTMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRFRK 782 GSRSSQASRRFGTMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRFRK Sbjct: 241 GSRSSQASRRFGTMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRFRK 289 >2FWR-A nrPDB Length = 472 Score = 429 bits (1103), Expect = e-120, Method: Composition-based stats. Identities = 120/447 (26%), Positives = 201/447 (44%), Gaps = 88/447 (19%) Query: 283 RCIHLEYPLLAEY------DFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSG 336 R + Y + EY +F +++ +P LR YQEK+L + + R G Sbjct: 55 RALAFRYRDIIEYFESNGIEFVDNAADPIPTPYFDAEISLRDYQEKALERWLVDKR---G 111 Query: 337 VIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDA 396 IVLP G+GK+ V + A + L++ + EQWK + ++ + + F+ Sbjct: 112 CIVLPTGSGKTHVAMAAINELSTPTLIVVPTLALAEQWKERLGIFG---EEYVGEFSGRI 168 Query: 397 KD-KPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVL 455 K+ KP+ S S Y AE++ + L+I DEVH +PA+ + ++ Sbjct: 169 KELKPLTVSTYDSAYV----------NAEKL-----GNRFMLLIFDEVHHLPAESYVQIA 213 Query: 456 TIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMS 515 + A +LGLTAT RED + L ++G K++E L ++AK ++ P++ Sbjct: 214 QMSIAPFRLGLTATFEREDGRHEILKEVVGGKVFELFPDSLAGK-HLAKYTIKRIFVPLA 272 Query: 516 PEF----------YREYV-------------------------------AIKTKKRILLY 534 + Y++++ A + +RI Sbjct: 273 EDERVEYEKREKVYKQFLRARGITLRRAEDFNKIVMASGYDERAYEALRAWEEARRIAFN 332 Query: 535 TMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNK----PYIYGPTSQGERM 590 + NK R + +++ H R DKII+F + E R++K P I TS+ ER Sbjct: 333 S--KNKIRKLREILERH--RKDKIIIFTRH----NELVYRISKVFLIPAITHRTSREERE 384 Query: 591 QILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGM 650 +IL+ F+ + I S+V D D+P+ANV + I S GS R+ QRLGR+LR KG Sbjct: 385 EILEGFR-TGRFRAIVSSQVLDEGIDVPDANVGV-IMSGSGSAREYIQRLGRILRPSKG- 441 Query: 651 VAEEYNAFFYSLVSQDTQEMAYSTKRQ 677 + A Y L+S+ T E+ + +R+ Sbjct: 442 ---KKEAVLYELISRGTGEVNTARRRK 465 >5TNU-A nrPDB Length = 459 Score = 369 bits (946), Expect = e-102, Method: Composition-based stats. Identities = 104/443 (23%), Positives = 188/443 (42%), Gaps = 84/443 (18%) Query: 284 CIHLEYPLLAEY------DFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGV 337 + +Y + +Y + + ++ +K LR YQ ++++ R G+ Sbjct: 51 ALAFKYRDVRKYFLEKEIEVEENVIDSLPFPLIKDKIELRDYQAEAVKAWLKEKR---GI 107 Query: 338 IVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAK 397 IVLP GAGK+ V + ++ L++ + + QWK + + D I + Sbjct: 108 IVLPTGAGKTQVALKIVSIMKVATLIVVPTIDLITQWKERINKYLDFDPGII----GGGE 163 Query: 398 DKPIGCSV--AISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVL 455 D G +V S Y+ AE + ++ L+I DEVH +P++ + + Sbjct: 164 DSLKGITVITYDSAYT----------RAEEL-----GNKFPLLIFDEVHHLPSEGYSIMA 208 Query: 456 TIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMS 515 + + +LGLTAT R+D K L+GP +Y + EL +++ ++ Sbjct: 209 QLFASPYRLGLTATPERDDGKHELYPILVGPIVYRKSVEELAGKYIAKYKI-KKLYVSLT 267 Query: 516 PEFYREYVAIKTKKRILLYT-----MNPNKFR-----------ACQFLIKFHER------ 553 E + Y ++ K + L + N + F A + L+ +HE Sbjct: 268 NEEKKRYDGLRKKLKDFLSSRGLKLQNLDDFHRLVKLAAKDKEAREALLAWHESLNIAVN 327 Query: 554 ---------------RNDKIIVFADNVFALKEYAIRLNK----PYIYGPTSQGERMQILQ 594 +N+KIIVF + + A R++K P + T + ER +ILQ Sbjct: 328 SQSKIEKLREILQEYKNEKIIVFTRDT----QMAYRISKTFLIPVVTYKTDKDEREEILQ 383 Query: 595 NFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEE 654 F+ + + I S V D D+P+A + I + + G++RQ QRLGR+LR K + Sbjct: 384 KFR-DGEYRVIVASTVFDEGVDVPDATLAIVMGGY-GTKRQFLQRLGRILRKK------D 435 Query: 655 YNAFFYSLVSQDTQEMAYSTKRQ 677 A +V++ T + S +R+ Sbjct: 436 KEALLIEIVTKGTADYRLSRRRR 458 >2FZ4-A nrPDB Length = 237 Score = 241 bits (615), Expect = 9e-64, Method: Composition-based stats. Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 28/204 (13%) Query: 283 RCIHLEYPLLAEY------DFRNDSVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSG 336 R + Y + EY +F +++ +P LR YQEK+L + + R G Sbjct: 55 RALAFRYRDIIEYFESNGIEFVDNAADPIPTPYFDAEISLRDYQEKALERWLVDKR---G 111 Query: 337 VIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDA 396 IVLP G+GK+ V + A + L++ + EQWK + ++ + + F+ Sbjct: 112 CIVLPTGSGKTHVAMAAINELSTPTLIVVPTLALAEQWKERLGIFG---EEYVGEFSGRI 168 Query: 397 KD-KPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVL 455 K+ KP+ S S Y AE++ + L+I DEVH +PA+ + ++ Sbjct: 169 KELKPLTVSTYDSAYV----------NAEKL-----GNRFMLLIFDEVHHLPAESYVQIA 213 Query: 456 TIVQAHCKLGLTATLVREDDKIVD 479 + A +LGLTAT RED + Sbjct: 214 QMSIAPFRLGLTATFEREDGRHEI 237 >1Z6A-A nrPDB Length = 500 Score = 81.4 bits (199), Expect = 2e-15, Method: Composition-based stats. Identities = 94/461 (20%), Positives = 158/461 (34%), Gaps = 114/461 (24%) Query: 313 TAVLRPYQEKSLRKM-FGNGRARSGVIVLPCGAGKSLVGVTAACTVRK-----RCLVLGN 366 A LRPYQ K M F N + G GK+L + +K LV+ Sbjct: 35 KANLRPYQIKGFSWMRFMNKLGFGICLADDMGLGKTLQTIAVFSDAKKENELTPSLVICP 94 Query: 367 SAVSVEQWKAQFKMWSTIDDSQICRFTSD-AKDKPIGCSVAISTYSMLGHTTKRSWEAER 425 +V + W+ + ++ + F D +K K + ++TY++L T+ Sbjct: 95 LSVL-KNWEEELSKFAPHL--RFAVFHEDRSKIKLEDYDIILTTYAVLLRDTR------- 144 Query: 426 VMEWLKTQEWGLMILDEVHTI--PAKMFRRVLTIVQAHCKLGLTATLVRE--DDKIVDLN 481 LK EW +++DE I P + + +++ ++ LT T + DD + Sbjct: 145 ----LKEVEWKYIVIDEAQNIKNPQTKIFKAVKELKSKYRIALTGTPIENKVDDLWSIMT 200 Query: 482 FLIGPKL------YEANWMELQNNGYIAKVQCA--------------------------- 508 FL L ++ +AK + Sbjct: 201 FLNPGLLGSYSEFKSKFATPIKKGDNMAKEELKAIISPFILRRTKYDKAIINDLPDKIET 260 Query: 509 EVWCPMSPEFYREYVAIKT-------------KKRILLYTMNP----------------- 538 V+C ++PE Y A +K ++L T+ Sbjct: 261 NVYCNLTPEQAAMYKAEVENLFNNIDSVTGIKRKGMILSTLLKLKQIVDHPALLKGGEQS 320 Query: 539 ----NKFRACQFLIKFHERRNDKIIVFADNVFALK------EYAIRLNKPYIYGPTSQGE 588 K +I+ DKI +F V K E + P++YG S+ E Sbjct: 321 VRRSGKMIRTMEIIEEALDEGDKIAIFTQFVDMGKIIRNIIEKELNTEVPFLYGELSKKE 380 Query: 589 RMQILQNFKHNPKINTIFIS-KVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAK 647 R I+ F++NP + I +S K G +L AN +I ++ Q RV R Sbjct: 381 RDDIISKFQNNPSVKFIVLSVKAGGFGINLTSANRVIHFDRWWNPAVED-QATDRVYR-- 437 Query: 648 KGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFK 688 + + N + L+S T E +DQ +FK Sbjct: 438 ---IGQTRNVIVHKLISVGTLEEK---------IDQLLAFK 466 >2ZJ8-A nrPDB Length = 720 Score = 57.1 bits (136), Expect = 3e-08, Method: Composition-based stats. Identities = 74/381 (19%), Positives = 136/381 (35%), Gaps = 64/381 (16%) Query: 315 VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTA----ACTVRKRCLVLGNSAVS 370 P Q ++L+ G+ + +I +P +GK+L+ A T + + + Sbjct: 23 SFYPPQAEALKSGILEGK--NALISIPTASGKTLIAEIAMVHRILTQGGKAVYIVPLKAL 80 Query: 371 VEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWL 430 E+ +F+ W I ++ T D S LG AE+ L Sbjct: 81 AEEKFQEFQDWEKIG-LRVAMATGD----------YDSKDEWLGKYDIIIATAEKFDSLL 129 Query: 431 K-TQEWG----LMILDEVHTIPAKMFRRVLTIVQAHCK-----LGLTATLVREDDKIVDL 480 + W +++ DE+H I ++ L ++ AH +GL+AT+ +L Sbjct: 130 RHGSSWIKDVKILVADEIHLIGSRDRGATLEVILAHMLGKAQIIGLSATI----GNPEEL 185 Query: 481 NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYRE-----YVAIKTKKRILLYT 535 + +L ++W ++ + Q W S + + Y AI+ KK L++ Sbjct: 186 AEWLNAELIVSDWRPVKLRRGVF-YQGFVTWEDGSIDRFSSWEELVYDAIRKKKGALIFV 244 Query: 536 MNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEY---------------AIRLNKPYI 580 R + + K ++ + AL E AIR + Sbjct: 245 ----NMRRKAERVALELSKKVKSLLTKPEIRALNELADSLEENPTNEKLAKAIRGGVAFH 300 Query: 581 YGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQ---ISSHGGSRR--- 634 + + ER+ + +NF+ I + + + P V+I+ S G R Sbjct: 301 HAGLGRDERVLVEENFR-KGIIKAVVATPTLSAGINTPAFRVIIRDIWRYSDFGMERIPI 359 Query: 635 -QEAQRLGRVLRAKKGMVAEE 654 + Q LGR R K V E Sbjct: 360 IEVHQMLGRAGRPKYDEVGEG 380 >3B6E-A nrPDB Length = 216 Score = 55.9 bits (133), Expect = 6e-08, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 22/151 (14%) Query: 311 KPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAA---------CTVRKRC 361 +P LRPYQ + + +I LP G+GK+ V V A + + Sbjct: 29 EPELQLRPYQMEVAQPALEGKNI---IICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKV 85 Query: 362 LVLGNSAVSVEQ-WKAQFKMWSTIDDSQICRFTSDAK------DKPIGCSVAISTYSMLG 414 +VL N + VEQ ++ +F+ + I + D + + C + IST +L Sbjct: 86 IVLVNKVLLVEQLFRKEFQPFLKKWYRVIG-LSGDTQLKISFPEVVKSCDIIISTAQILE 144 Query: 415 HTTKRSWEAERVMEWLKTQEWGLMILDEVHT 445 ++ E L ++ L+I+DE H Sbjct: 145 NSLLNLENGEDAGVQLS--DFSLIIIDECHH 173 >3H1T-A nrPDB Length = 590 Score = 53.6 bits (127), Expect = 3e-07, Method: Composition-based stats. Identities = 74/413 (17%), Positives = 150/413 (36%), Gaps = 63/413 (15%) Query: 298 RNDSVNPDINIDLKPTA-VLRPYQEKSLRKMFG---NGRARSGVIVLPCGAGKSLVGVTA 353 +++ ++ ++ + R YQ+ ++ + G+ RS +I + G GK++V Sbjct: 160 KDEDLDTLLSPYHHVSGYSPRYYQQIAINRAVQSVLQGKKRS-LITMATGTGKTVVAFQI 218 Query: 354 ACTV------------RKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPI 401 + + + R L L + V V+ K + T R + Sbjct: 219 SWKLWSARWNRTGDYRKPRILFLADRNVLVDDPKDK-----TFTPFGDARHKIEGGKVVK 273 Query: 402 GCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTIPAK---MFRRVLTIV 458 + + Y + +R + + + L+I+DE H A+ +R +L Sbjct: 274 SREIYFAIYQSIASDERRPG----LYKEFPQDFFDLIIIDECHRGSARDNSNWREILEYF 329 Query: 459 QAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEV-------- 510 + ++G+TAT +RED++ D G +Y + + ++G++A + V Sbjct: 330 EPAFQIGMTATPLREDNR--DTYRYFGNPIYTYSLRQGIDDGFLAPYRVHRVISEVDAAG 387 Query: 511 WCPMSPEFYR--------EYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFA 562 W P + R EY ++ I L + +K + R K IVF Sbjct: 388 WRPSKGDVDRFGREIPDGEYQTKDFERVIALKARTDAFAKHLTDFMKRTD-RFAKTIVFC 446 Query: 563 DNVFALKEYAIRLNK----------PYIYGPTSQGERMQI--LQNFKHNPKINTIFI--S 608 + E LN Y+ TS+ ++ L F+ + + S Sbjct: 447 VDQEHADEMRRALNNLNSDLSRKHPDYVARVTSEEGKIGKGHLSRFQELETSTPVILTTS 506 Query: 609 KVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYS 661 ++ T D P + ++ S + Q +GR R ++ +N Y+ Sbjct: 507 QLLTTGVDAPTCK-NVVLARVVNSMSEFKQIVGRGTRLREDYGKLWFNIIDYT 558 >1Z5Z-A nrPDB Length = 271 Score = 53.6 bits (127), Expect = 4e-07, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 22/150 (14%) Query: 546 FLIKFHERRNDKIIVFADNVFALK------EYAIRLNKPYIYGPTSQGERMQILQNFKHN 599 +I+ DKI +F V K E + P++YG S+ ER I+ F++N Sbjct: 103 EIIEEALDEGDKIAIFTQFVDMGKIIRNIIEKELNTEVPFLYGELSKKERDDIISKFQNN 162 Query: 600 PKINTIFIS-KVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAF 658 P + I +S K G +L AN +I ++ Q RV R + + N Sbjct: 163 PSVKFIVLSVKAGGFGINLTSANRVIHFDRWWNPAVED-QATDRVYR-----IGQTRNVI 216 Query: 659 FYSLVSQDTQEMAYSTKRQRFLVDQGYSFK 688 + L+S T E +DQ +FK Sbjct: 217 VHKLISVGTLEEK---------IDQLLAFK 237 >1WP9-A nrPDB Length = 494 Score = 50.9 bits (120), Expect = 2e-06, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 89/234 (38%), Gaps = 25/234 (10%) Query: 314 AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAA----CTVRKRCLVLGNSAV 369 R YQE ++ + + +IVLP G GK+L+ + A + L+L + Sbjct: 8 IQPRIYQE----VIYAKCKETNCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAPTKP 63 Query: 370 SVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEW 429 V Q F+ + +I T + P S A + + T ++ E + + Sbjct: 64 LVLQHAESFRRLFNLPPEKIVALTG--EKSPEERSKA-WARAKVIVATPQTIENDLLAGR 120 Query: 430 LKTQEWGLMILDEVH--------TIPAKMFRRVLTIVQAHCKLGLTATLVREDDKI-VDL 480 + ++ L++ DE H A+ ++R +GLTA+ +KI + Sbjct: 121 ISLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQAK---NPLVIGLTASPGSTPEKIMEVI 177 Query: 481 NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVA-IKTKKRILL 533 N L + + Y+ ++ V + PE Y+E ++ R L Sbjct: 178 NNLGIEHIEYRSENSPDVRPYVKGIRFEWVRVDL-PEIYKEVRKLLREMLRDAL 230 Score = 50.5 bits (119), Expect = 3e-06, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 27/161 (16%) Query: 540 KFRACQFLI--KFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPT------------- 584 K + +I + ++N KIIVF + K+ L K I Sbjct: 344 KMDKLKEIIREQLQRKQNSKIIVFTNYRETAKKIVNELVKDGIKAKRFVGQASKENDRGL 403 Query: 585 SQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVL 644 SQ E+ IL F + N + + VG+ D+PE ++++ + R QR GR Sbjct: 404 SQREQKLILDEFAR-GEFNVLVATSVGEEGLDVPEVDLVVFYEPVPSAIRS-IQRRGRTG 461 Query: 645 RAKKGMVAEEYNAFFYSLVSQDTQE--MAYSTKRQRFLVDQ 683 R G V L+++ T++ +S++++ ++ + Sbjct: 462 RHMPGRV--------IILMAKGTRDEAYYWSSRQKEKIMQE 494 >4GL2-A nrPDB Length = 699 Score = 49.8 bits (117), Expect = 4e-06, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 22/150 (14%) Query: 312 PTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAA---------CTVRKRCL 362 LRPYQ + + +I LP G GK+ V V A + + + Sbjct: 4 AMLQLRPYQMEVAQPALEGKNI---IICLPTGCGKTRVAVYIAKDHLDKKKKASEPGKVI 60 Query: 363 VLGNSAVSVEQ-WKAQFKMWSTIDDSQICRFTSDAK------DKPIGCSVAISTYSMLGH 415 VL N + VEQ ++ +F+ + I + D + + C + IST +L + Sbjct: 61 VLVNKVLLVEQLFRKEFQPFLKKWYRVIG-LSGDTQLKISFPEVVKSCDIIISTAQILEN 119 Query: 416 TTKRSWEAERVMEWLKTQEWGLMILDEVHT 445 + E L ++ L+I+DE H Sbjct: 120 SLLNLENGEDAGVQLS--DFSLIIIDECHH 147 >5JXR-A nrPDB Length = 723 Score = 48.6 bits (114), Expect = 1e-05, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 77/187 (41%), Gaps = 18/187 (9%) Query: 315 VLRPYQEKSLRKMFGN--GRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSV- 371 +R YQ L + SG++ G GK+L + +R + G V+V Sbjct: 105 TMRDYQIAGLN-WLISLHENGISGILADEMGLGKTLQTIAFLGYLRHIMGITGPHLVTVP 163 Query: 372 ----EQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVM 427 + WK +F+ W+ + + + + + + I + + + + + R Sbjct: 164 KSTLDNWKREFEKWTPEVNVLVLQGAKEERHQLINDRLVDENFDVCITSYEMIL---REK 220 Query: 428 EWLKTQEWGLMILDEVHTIPAK--MFRRVLTIVQAHCKLGLTATLVREDDKIV---DLNF 482 LK W +I+DE H I + +V+ + + +L +T T + +++ LNF Sbjct: 221 AHLKKFAWEYIIIDEAHRIKNEESSLAQVIRMFNSRNRLLITGTPL-QNNLHELWALLNF 279 Query: 483 LIGPKLY 489 L+ P ++ Sbjct: 280 LL-PDVF 285 >1GM5-A nrPDB Length = 780 Score = 48.6 bits (114), Expect = 1e-05, Method: Composition-based stats. Identities = 66/352 (18%), Positives = 124/352 (35%), Gaps = 44/352 (12%) Query: 343 GAGKSLVGVTAAC---TVRKRCLVLGNSAVSVEQWKAQ----FKMWSTIDDSQICRFTSD 395 G+GK++V A + + +++ Q + F ++ I T Sbjct: 399 GSGKTVVAQLAILDNYEAGFQTAFMVPTSILAIQHYRRTVESFSKFNIHVALLIGATTPS 458 Query: 396 AKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVL 455 K+K I + ++ T + E + + GL+I+DE H K ++ Sbjct: 459 EKEK-IKSGLRNGQIDVVIGTHAL------IQEDVHFKNLGLVIIDEQHRFGVKQREALM 511 Query: 456 TIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPM- 514 + L ++AT + + L + E + + + PM Sbjct: 512 NKGKMVDTLVMSATPIPRSMALAFYGDLDVTVIDEMPP---------GRKEVQTMLVPMD 562 Query: 515 -SPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAI 573 E Y E+V + + + + P LI+ ++ N K V + KE Sbjct: 563 RVNEVY-EFVRQEVMRGGQAFIVYP--------LIEESDKLNVKSAV-EMYEYLSKEVFP 612 Query: 574 RLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSR 633 ++G SQ E+ +++ F + + + + V + D+P ANV++ + Sbjct: 613 EFKLGLMHGRLSQEEKDRVMLEF-AEGRYDILVSTTVIEVGIDVPRANVMVIENPERFGL 671 Query: 634 RQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGY 685 Q Q GRV R A+ + LV D E A R L G+ Sbjct: 672 AQLHQLRGRVGRG-------GQEAYCF-LVVGDVGEEAMERLRFFTLNTDGF 715 >6G19-A nrPDB Length = 696 Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 20/147 (13%) Query: 314 AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAA---------CTVRKRCLVL 364 LRPYQ + + +I LP G+GK+ V V + + +VL Sbjct: 1 LQLRPYQMEVAQPALDGKNI---IICLPTGSGKTRVAVYITKDHLDKKKQASESGKVIVL 57 Query: 365 GNSAVSVEQ-WKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEA 423 N + EQ ++ +F + I S I + +Y ++ T + + Sbjct: 58 VNKVMLAEQLFRKEFNPYLKKWYRIIGL--SGDTQLKISFPEVVKSYDVIISTAQILENS 115 Query: 424 -----ERVMEWLKTQEWGLMILDEVHT 445 + ++ ++ L+I+DE H Sbjct: 116 LLNLESGDDDGVQLSDFSLIIIDECHH 142 >2HYI-C nrPDB Length = 413 Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats. Identities = 61/418 (14%), Positives = 137/418 (32%), Gaps = 57/418 (13%) Query: 250 DFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINID 309 K +EE+ V FE +E ++ P R D + Sbjct: 8 ATSGSARKRLLKEEDMTKVEFETSEE-VDVT---------PTFDTMGLREDLLRGIYAYG 57 Query: 310 LKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVR--------KRC 361 + + + Q+++++++ + R + G GK+ + ++ + Sbjct: 58 FEKPSAI---QQRAIKQII---KGRDVIAQSQSGTGKT--ATFSISVLQCLDIQVRETQA 109 Query: 362 LVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSW 421 L+L + Q + + Q + ++ T R + Sbjct: 110 LILAPTRELAVQIQKGLLALGDYMNVQCHACIGGT-NVGEDIRKLDYGQHVVAGTPGRVF 168 Query: 422 EAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL- 480 + R L+T+ +++LDE + K F+ + V + L+ L Sbjct: 169 DMIRRRS-LRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILE 227 Query: 481 ---NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMN 537 F+ P EL G + + + E ++ + + L T+ Sbjct: 228 MTNKFMTDPIRILVKRDELTLEG------IKQFFVAVEREEWK-FDTLC----DLYDTLT 276 Query: 538 PNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFK 597 Q +I + +R + ++E ++ ++G Q ER I++ F+ Sbjct: 277 IT-----QAVIFCNTKRKVDWL-----TEKMREANFTVSS--MHGDMPQKERESIMKEFR 324 Query: 598 HNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEY 655 + + + V D+P+ +++I +R R+GR R + VA + Sbjct: 325 -SGASRVLISTDVWARGLDVPQVSLIINY-DLPNNRELYIHRIGRSGRYGRKGVAINF 380 >5JCF-A nrPDB Length = 701 Score = 46.3 bits (108), Expect = 6e-05, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 54/152 (35%), Gaps = 19/152 (12%) Query: 313 TAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAA---------CTVRKRCLV 363 LR YQ + + +I LP G+GK+ V V + + + +V Sbjct: 5 DLTLRDYQMEVAKPALNGENI---IICLPTGSGKTRVAVYITKDHLDKKRKASEQGKVIV 61 Query: 364 LGNSAVSVEQ-WKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHT----TK 418 L N VEQ + +F + I S + I + Y ++ T Sbjct: 62 LVNKVPLVEQHLRKEFNPFLKHWYQVIGL--SGDSELKISFPEVVKRYDVIICTAQILEN 119 Query: 419 RSWEAERVMEWLKTQEWGLMILDEVHTIPAKM 450 A E ++ ++ L+I+D+ H + Sbjct: 120 SLLNATEEDESVRLSDFSLIIIDQCHHTQKEG 151 >4KBG-A nrPDB Length = 365 Score = 45.9 bits (107), Expect = 7e-05, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 6/74 (8%) Query: 556 DKIIVFADNVFALKEYA---IRLNKPY--IYGPTSQGERMQILQNFKHNPKINTIFISKV 610 D+ +VF +E A +RL P ++G SQGER ++L F+ ++ + + V Sbjct: 239 DRAMVFTRTKAETEEIAQGLLRLGHPAQALHGDLSQGERERVLGAFRQ-GEVRVLVATDV 297 Query: 611 GDTSFDLPEANVLI 624 D+P+ ++++ Sbjct: 298 AARGLDIPQVDLVV 311 >4W7S-A nrPDB Length = 463 Score = 44.4 bits (103), Expect = 2e-04, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 15/127 (11%) Query: 537 NPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNK------PYIYGPTSQGERM 590 + +KF+ + ++ ++ II+F + A + K ++G SQ +R Sbjct: 296 DEDKFKKLKPIVAKYDP---PIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQRE 352 Query: 591 QILQNFKHNPKINTIFISKVGDTSFDLPEANVLI--QISSHGGSRRQEAQRLGRVLRAKK 648 LQ F+ N K+ + + V D+P ++++ QIS R+GR RA Sbjct: 353 HSLQLFRTN-KVQIMIATNVAARGLDIPNVSLVVNFQISK---KMDDYIHRIGRTGRAAN 408 Query: 649 GMVAEEY 655 A + Sbjct: 409 EGTAVSF 415 >2Z0M-A nrPDB Length = 337 Score = 44.0 bits (102), Expect = 3e-04, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 112/341 (32%), Gaps = 47/341 (13%) Query: 320 QEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFK 379 Q K++ M V+ G+GK+ + + LV+ + Q + + Sbjct: 21 QSKTIPLMLQGKNV---VVRAKTGSGKTAAYAIPILELGMKSLVVTPTRELTRQVASHIR 77 Query: 380 MWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMI 439 D+++ K V + + ++ V++ + ++I Sbjct: 78 DIGRYMDTKVAEVYGGMPYKAQINRVRNADIVVATPGRLLDLWSKGVIDLSS---FEIVI 134 Query: 440 LDEVHTIPAKMFRRVLTIVQAHCK----LGLTATLVREDDKIVDLNFLIGPKLYEANWME 495 +DE + F + I+ A GL + + E+ + V +F+ N+ E Sbjct: 135 IDEADLMFEMGFIDDIKIILAQTSNRKITGLFSATIPEEIRKVVKDFIT-------NYEE 187 Query: 496 LQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRN 555 ++ +A V+ V + +K +A + E ++ Sbjct: 188 IEACIGLANVEHKFVHVK---------DDWR------------SKVQALR------ENKD 220 Query: 556 DKIIVFADNVFALKEYAIRLNKPY-IYGPTSQGERMQILQNFKHNPKINTIFISKVGDTS 614 +IVF + + + + G Q R + + F+ + + + + V Sbjct: 221 KGVIVFVRTRNRVAKLVRLFDNAIELRGDLPQSVRNRNIDAFR-EGEYDMLITTDVASRG 279 Query: 615 FDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEY 655 D+P +I + R R+GR R + A + Sbjct: 280 LDIPLVEKVINFDA-PQDLRTYIHRIGRTGRMGRKGEAITF 319 >5ZWN-y nrPDB Length = 588 Score = 43.6 bits (101), Expect = 3e-04, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 15/127 (11%) Query: 537 NPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNK------PYIYGPTSQGERM 590 + +KF+ + ++ ++ II+F + A + K ++G SQ +R Sbjct: 421 DEDKFKKLKPIVAKYDP---PIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQRE 477 Query: 591 QILQNFKHNPKINTIFISKVGDTSFDLPEANVLI--QISSHGGSRRQEAQRLGRVLRAKK 648 LQ F+ N K+ + + V D+P ++++ QIS R+GR RA Sbjct: 478 HSLQLFRTN-KVQIMIATNVAARGLDIPNVSLVVNFQISK---KMDDYIHRIGRTGRAAN 533 Query: 649 GMVAEEY 655 A + Sbjct: 534 EGTAVSF 540 >5LST-A nrPDB Length = 693 Score = 43.6 bits (101), Expect = 3e-04, Method: Composition-based stats. Identities = 61/356 (17%), Positives = 119/356 (33%), Gaps = 53/356 (14%) Query: 315 VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGV--TAACTVRKRCLVLGNSAVSVE 372 RP QE+++ ++ S ++VLP GAGKSL + R CL L S + Sbjct: 57 AFRPGQERAVMRILS---GISTLLVLPTGAGKSLCYQLPALLYSRRSPCLTLVVSPLLSL 113 Query: 373 QWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKT 432 + + + I + + + + + + +L T + A + + Sbjct: 114 MDDQVSGLPPCLKAACIHSGMTRKQRESVLQKIRAAQVHVLMLTPEALVGAGGLPPAAQL 173 Query: 433 QEWGLMILDEVHTIPAKM------FRRVLTIVQ----AHCKLGLTATLVREDDKIVDLNF 482 +DE H + + RV +++ HC LGLTAT R V + Sbjct: 174 PPVAFACIDEAHCLSQWSHNFRPCYLRVCKVLRERMGVHCFLGLTATATRRTASDVAQHL 233 Query: 483 LIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFR 542 + + + N +++ M + + + + KR F+ Sbjct: 234 AVAEEPDLHGPAPVPTNLHLS--------VSMDRDTDQALLTLLQGKR----------FQ 275 Query: 543 ACQFLIKFHERRNDKIIVFADNVFALKEYAIRLN-KPYIYGPTSQ------------GER 589 +I + RR D + + AL + P G + ER Sbjct: 276 NLDSIIIYCNRRED-----TERIAALLRTCLHAAWVPGSGGRAPKTTAEAYHAGMCSRER 330 Query: 590 MQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLR 645 ++ + F ++ + + D P+ ++ + S Q +GR R Sbjct: 331 RRVQRAF-MQGQLRVVVATVAFGMGLDRPDVRAVLHL-GLPPSFESYVQAVGRAGR 384 >2NMV-A nrPDB Length = 661 Score = 42.8 bits (99), Expect = 6e-04, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 81/205 (39%), Gaps = 31/205 (15%) Query: 548 IKFHERRNDKIIVFA-------DNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP 600 I+ RN++++V D LKE I++N Y++ ER++I+++ + Sbjct: 438 IQARIERNERVLVTTLTKKMSEDLTDYLKEIGIKVN--YLHSEIKTLERIEIIRDLRL-G 494 Query: 601 KINTIFISKVGDTSFDLPEANVLIQI----SSHGGSRRQEAQRLGRVLRAKKGMVAEEYN 656 K + + + D+PE +++ + S R Q +GR R +G V + Sbjct: 495 KYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNAEGRVIMYAD 554 Query: 657 AFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITK-----------------LAGMEEE 699 S+ + +++RF + G + K I K Sbjct: 555 KITKSMEIAINETKRRREQQERFNEEHGITPKTINKEIRDVIRATVAAEDKAEYKTKAAP 614 Query: 700 DLAFSTKEEQQQLLQKVLAATDLDA 724 L+ TK+E+Q++++++ A Sbjct: 615 KLSKMTKKERQKVVEQMEHEMKEAA 639 >3TBK-A nrPDB Length = 555 Score = 41.7 bits (96), Expect = 0.001, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 18/111 (16%) Query: 549 KFHERRNDKIIVFADN---VFALKEY-----AIRLNKPYIY---GPTSQGERMQ------ 591 ++H + K I+F V ALK++ A+ KP I G T++ M Sbjct: 383 EYHLKPETKTILFVKTRALVDALKKWIEENPALSFLKPGILTGRGRTNRATGMTLPAQKC 442 Query: 592 ILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGR 642 +L+ F+ + N + + V D D+ E N++I + + G+ + Q GR Sbjct: 443 VLEAFRASGDNNILIATSVADEGIDIAECNLVI-LYEYVGNVIKMIQTRGR 492 Score = 37.4 bits (85), Expect = 0.024, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 41/136 (30%), Gaps = 12/136 (8%) Query: 317 RPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAA--------CTVRKRCLVLGNSA 368 R YQ L + ++ +I P G GK+ V + C + + + N Sbjct: 6 RNYQ---LELALPAKKGKNTIICAPTGCGKTFVSLLICEHHLKKFPCGQKGKVVFFANQI 62 Query: 369 VSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVME 428 EQ F + I + D + I ++ T + Sbjct: 63 PVYEQQATVFSRYFERLGYNIASISGATSDS-VSVQHIIEDNDIIILTPQILVNNLNNGA 121 Query: 429 WLKTQEWGLMILDEVH 444 + LMI DE H Sbjct: 122 IPSLSVFTLMIFDECH 137 >1D9Z-A nrPDB Length = 657 Score = 41.7 bits (96), Expect = 0.001, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 87/220 (39%), Gaps = 42/220 (19%) Query: 538 PNKFRACQFLIKFHER--RNDKIIVFA-------DNVFALKEYAIRLNKPYIYGPTSQGE 588 P K + + + ER RN++ +V D LKE I++ Y++ E Sbjct: 425 PTKGQIDDLIGEIRERVERNERTLVTTLTKKMAEDLTDYLKEAGIKVA--YLHSEIKTLE 482 Query: 589 RMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQI----SSHGGSRRQEAQRLGRVL 644 R++I+++ + K + + + D+PE +++ + S R Q +GR Sbjct: 483 RIEIIRDLRL-GKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAA 541 Query: 645 RAKKGMVAEEYNAFFYSLVSQDTQEMAYSTKRQRFLVDQGYSFK--------------VI 690 R G V Y+ + E+A ++R + + Y+ K VI Sbjct: 542 RNANGHV------IMYADTITKSMEIAIQETKRRRAIQEEYNRKHGIVPRTVKKEIRDVI 595 Query: 691 TKLAGMEEEDL------AFSTKEEQQQLLQKVLAATDLDA 724 EE ++ A TK+E+++L++ + A A Sbjct: 596 RATYAAEETEMYEAKPAAAMTKQEREELIRTLEAEMKEAA 635 >5JBJ-A nrPDB Length = 680 Score = 41.3 bits (95), Expect = 0.002, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 31/179 (17%) Query: 314 AVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAA-----CTVRKRCLVLGNSA 368 + L YQ +++ R R+ ++ LP GAGK+ V R VL N Sbjct: 7 SELHGYQLEAVAPAL---RGRNSIVWLPTGAGKTRAAVHVCRRHLEGRRGGRVAVLVNKV 63 Query: 369 VSVEQWKAQFKMWSTIDDSQ-ICRFTSDAKDK------PIGCSVAISTYSMLGHTTKRSW 421 V+Q + + + D+ + + D+ K G V I T +L + Sbjct: 64 HLVQQHLEK--EFHVLRDAFKVTAVSGDSSHKCFFGQLAKGSDVVICTAQILQNALLSGE 121 Query: 422 EAERVMEWLKTQEWGLMILDEVHTIPAKMF--RRVLTIVQA--------HCKLGLTATL 470 E RV + ++ L+++DE H + + +L+ +Q LGLTA+ Sbjct: 122 EEARV----ELTDFSLLVIDECHHTQKEAVYNKIMLSYLQKKLSGQRDLPQILGLTASP 176 Score = 37.4 bits (85), Expect = 0.027, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 26/43 (60%), Gaps = 1/43 (2%) Query: 585 SQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQIS 627 +Q E+ ++ F++ ++N +F + V + D+PE N++++ Sbjct: 420 TQNEQQDVITLFRY-GELNLLFSTSVAEEGLDIPECNIVVRYG 461 >1OYY-A nrPDB Length = 523 Score = 40.5 bits (93), Expect = 0.002, Method: Composition-based stats. Identities = 61/350 (17%), Positives = 115/350 (32%), Gaps = 67/350 (19%) Query: 315 VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQW 374 RP QE+ + + R ++V+P G GKSL A + +V+ + Sbjct: 25 QFRPGQEEIIDTVLS---GRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLM--- 78 Query: 375 KAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVM-----EW 429 K Q + C ++ +++ + T G ER+M E Sbjct: 79 KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRT----GQIRLLYIAPERLMLDNFLEH 134 Query: 430 LKTQEWGLMILDEVHTIPA---------KMFRRVLTIVQAHCKLGLTATLVREDDKIVDL 480 L L+ +DE H I ++ + LTAT +D D+ Sbjct: 135 LAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTAT--ADDTTRQDI 192 Query: 481 NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK 540 L+G + P+ + I + R + M K Sbjct: 193 VRLLG------------------------LNDPL--------IQISSFDRPNIRYMLMEK 220 Query: 541 FRACQFLIKF-HERRNDKIIVFADNVFALKEYAIRLNKPYIYGPT-----SQGERMQILQ 594 F+ L+++ E+R I++ ++ +++ A RL I R + + Sbjct: 221 FKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQE 280 Query: 595 NFKHNPKINTIFISKVGDTSFDLPEANVLIQ--ISSHGGSRRQEAQRLGR 642 F+ + + + + + P ++ I + S QE R GR Sbjct: 281 KFQRDD-LQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGR 329 >4D25-A nrPDB Length = 434 Score = 40.5 bits (93), Expect = 0.003, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 54/137 (39%), Gaps = 9/137 (6%) Query: 524 AIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNK-----P 578 A ++I + K + + LI+ E +I+VF + A L++ Sbjct: 272 ASTDVEQIFIEVTKYEKRNSLKQLIE--ENDGKRILVFVETKRNADFIAAMLSEQQLLTS 329 Query: 579 YIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQ 638 I+G Q ER + LQNFK + K + + V D+ ++++ S + Sbjct: 330 SIHGDRMQREREEALQNFK-SGKHCILVATAVAARGLDIKNVDIVVNY-DLPKSIDEYVH 387 Query: 639 RLGRVLRAKKGMVAEEY 655 R+GR R A + Sbjct: 388 RIGRTGRVGNRGKAVSF 404 >2VSX-A nrPDB Length = 395 Score = 40.1 bits (92), Expect = 0.004, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 96/308 (31%), Gaps = 67/308 (21%) Query: 342 CGAGKS-LVGVTAACTVRKRC-----LVLGNSAVSVEQWKA---------QFKMWSTIDD 386 G GK+ + A + L+L + Q + K+ + I Sbjct: 68 SGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGG 127 Query: 387 SQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTI 446 + +D I + + R T + + ILDE + Sbjct: 128 TSFVEDAEGLRDAQIVVGTPGRVFDNIQRRRFR------------TDKIKMFILDEADEM 175 Query: 447 PAKMFR----RVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYI 502 + F+ ++ T++ ++ L + + D V F+ P EL G Sbjct: 176 LSSGFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEG-- 233 Query: 503 AKVQCAEVWCPMSPEFYRE------YVAIKTKKRILLYTMNPNKFRACQFLIKFHERRND 556 + + + E Y+ Y +I + ++ N R + L + RND Sbjct: 234 ----IKQFYVNVEEEEYKYECLTDLYDSISVTQAVIFC----NTRRKVEELTT--KLRND 283 Query: 557 KIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFD 616 K V IY Q ER I++ F+ + + + + D Sbjct: 284 KFTV-----------------SAIYSDLPQQERDTIMKEFR-SGSSRILISTDLLARGID 325 Query: 617 LPEANVLI 624 + + +++I Sbjct: 326 VQQVSLVI 333 >6BOG-A nrPDB Length = 968 Score = 40.1 bits (92), Expect = 0.004, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 18/124 (14%) Query: 360 RCLVLGNSAV----SVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGH 415 R L++ + VE + ++ DD + DA + + I + Sbjct: 202 RVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARR 261 Query: 416 TTKRSWEAERVMEWLKTQEWGLMILDEVHTI------PAKMFRRVLTIVQ-AHCKLGLTA 468 + +R +E L EW L+++DE H + P++ ++ + + + L LTA Sbjct: 262 SKQR-------LEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIEQLAEHVPGVLLLTA 314 Query: 469 TLVR 472 T + Sbjct: 315 TPEQ 318 >5DTU-A nrPDB Length = 475 Score = 39.8 bits (91), Expect = 0.004, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 59/148 (39%), Gaps = 23/148 (15%) Query: 515 SPEFYREYVA-IKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAI 573 + E E++A +KR L +N +F+ IIVF N+ E Sbjct: 287 TVEQRVEFIAGEDKRKRRLQEILNSGQFKP-------------PIIVFV-NIKRNCEMVA 332 Query: 574 R------LNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQIS 627 + + ++G +Q +R L + N + + + + + D+P+ ++++ Sbjct: 333 KDIKSWGFSTVTLHGSKTQEQREASLAALR-NGQAHILVATDLAGRGIDVPDVSLVVNF- 390 Query: 628 SHGGSRRQEAQRLGRVLRAKKGMVAEEY 655 + + R+GR RA K VA + Sbjct: 391 NMPSTIEAYTHRIGRTGRAGKSGVAITF 418 >2VA8-A nrPDB Length = 715 Score = 38.2 bits (87), Expect = 0.014, Method: Composition-based stats. Identities = 67/398 (16%), Positives = 124/398 (31%), Gaps = 102/398 (25%) Query: 316 LRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVG-VTAACTVRK---RCLVLGNSAVSV 371 L P Q ++++K G ++ P G+GK+L+ + + K + + + Sbjct: 31 LNPPQTEAVKKGLLEGNRL--LLTSPTGSGKTLIAEMGIISFLLKNGGKAIYVTPLRALT 88 Query: 372 EQWKAQFKMWSTIDDSQICRFTSDAKDK----PIGCSVAISTYSMLGHTTKRSWEAERVM 427 + FK W I TS D + I+TY L + Sbjct: 89 NEKYLTFKDWELI--GFKVAMTSGDYDTDDAWLKNYDIIITTYEKLDSLWRHR------P 140 Query: 428 EWLKTQEWGLMILDEVHTI--PAKMFRRVLTIVQAHCK--LGLTATLVREDDKIVDLNFL 483 EWL E +LDE+H + P + ++A + L L+AT+ + Sbjct: 141 EWL--NEVNYFVLDELHYLNDPERGPVVESVTIRAKRRNLLALSATI----SNYKQIAKW 194 Query: 484 IGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEF-YREYVAIKTKKRILLYTMNPNKFR 542 +G + NW P+ Y E K + ++ K Sbjct: 195 LGAEPVATNWRP----------------VPLIEGVIYPE--RKKKEYNVIFKDNTTKKVH 236 Query: 543 ACQFLIKF---HERRNDKIIVFADNVFALKEYAIR------------------------- 574 +I + +N +++VF ++ + A++ Sbjct: 237 GDDAIIAYTLDSLSKNGQVLVFRNSRKMAESTALKIANYMNFVSLDENALSEILKQLDDI 296 Query: 575 --------------LNKPYIYGPT--SQGERMQILQNFKHNPKINTIFISKVGDTSFDLP 618 ++K Y S+ R I + F+ KI I + +LP Sbjct: 297 EEGGSDEKELLKSLISKGVAYHHAGLSKALRDLIEEGFRQR-KIKVIVATPTLAAGVNLP 355 Query: 619 EANVLI--------QISSHGGS--RRQEAQRLGRVLRA 646 V+I +I+ + + Q GR R Sbjct: 356 ARTVIIGDIYRFNKKIAGYYDEIPIMEYKQMSGRAGRP 393 >4ON9-A nrPDB Length = 580 Score = 37.8 bits (86), Expect = 0.018, Method: Composition-based stats. Identities = 52/258 (20%), Positives = 98/258 (37%), Gaps = 51/258 (19%) Query: 413 LGHTTKRSWEAERVMEWLKTQEWGLMIL-----DEVHTIPAKMFRRVLTIVQAHCKLGLT 467 L R + ++ +W+ T + M+ DE I +F + +H + Sbjct: 283 LSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALF-----LYTSHLRKYND 337 Query: 468 ATLVREDDKIVD-LNFLIGPKLYEANWMELQNNGYIAKVQCA---EVWCPMSPEFYREYV 523 A ++ E ++ D L++L + + V+ A E+ ++ F + Sbjct: 338 ALIISEHARMKDALDYL---------------KDFFSNVRAAGFDEIEQDLTQRFEEKLQ 382 Query: 524 AIKTKKRILLYTMNPNKFRACQFLIK--FHERRNDKIIVFADN---VFALKEYA-----I 573 +++ R NP K F+++ +H I+F V ALK + + Sbjct: 383 ELESVSRDP-SNENP-KLEDLCFILQEEYHLNPETITILFVKTRALVDALKNWIEGNPKL 440 Query: 574 RLNKPYIY---GPTSQGERMQ------ILQNFKHNPKINTIFISKVGDTSFDLPEANVLI 624 KP I G T+Q M IL FK + N + + V D D+ + N++I Sbjct: 441 SFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVI 500 Query: 625 QISSHGGSRRQEAQRLGR 642 + + G+ + Q GR Sbjct: 501 -LYEYVGNVIKMIQTRGR 517 Score = 37.1 bits (84), Expect = 0.029, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 100/294 (34%), Gaps = 49/294 (16%) Query: 299 NDSVNPDINID--LKPTAVLRPYQ-EKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAAC 355 N S D N+ KP R YQ E +L M + ++ +I P G GK+ V + C Sbjct: 15 NSSEVSDTNLYSPFKP----RNYQLELALPAM----KGKNTIICAPTGCGKTFVSL-LIC 65 Query: 356 T---------VRKRCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVA 406 + + + N EQ K+ F + ++ + + + Sbjct: 66 EHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAEN-VPVEQI 124 Query: 407 ISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTIPAK------MFRRVLTIVQA 460 + ++ T + + + LMI DE H + MF + + Sbjct: 125 VENNDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGG 184 Query: 461 -----HCKLGLTATLVREDDKIVDLNFLIGPKL-----------YEANWMELQNNGYIAK 504 +GLTA++ D K D KL + N EL+ Y + Sbjct: 185 SSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQ 244 Query: 505 VQCAEVWCPMSPEFY---REYVAIKT--KKRILLYTMNPNKFRACQFLIKFHER 553 +V +S +F + + KRI N ++ + +F + +E+ Sbjct: 245 KFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQ 298 >4A2W-A nrPDB Length = 936 Score = 37.1 bits (84), Expect = 0.035, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 95/302 (31%), Gaps = 23/302 (7%) Query: 192 PVIRECRLRNSEGEATELITETFTSKSAISKTAESSGGPSTSRVTDPQGKSDIPMDLFDF 251 P I C + + E E + I+E + + I+K E + + Sbjct: 126 PYISTCLI-DRECEEIQQISENRSKAAGITKLIECLCRSDKEHWPKSLQLALDTTGYYRA 184 Query: 252 YEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLK 311 E D E+ ++ + + ++ +E E + + + + Sbjct: 185 SELWDIREDNAKDVDSEMTDASEDCLEASMTYSEEAEPDDNLSENLGSAAEGIGKPPPVY 244 Query: 312 PTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTV--------RKRCLV 363 T R YQ + L + NG+ + +I P G+GK+ V + C RK +V Sbjct: 245 ETKKARSYQIE-LAQPAINGK--NALICAPTGSGKTFVSI-LICEHHFQNMPAGRKAKVV 300 Query: 364 LGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEA 423 + V V + + + S + I ++ T + + Sbjct: 301 FLATKVPVYEQQKNVFKHHFERQGYSVQGISGENFSNVSVEKVIEDSDIIVVTPQILVNS 360 Query: 424 ERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFL 483 + LMI DE H T + +T L ++ + L + Sbjct: 361 FEDGTLTSLSIFTLMIFDECHN----------TTGNHPYNVLMTRYLEQKFNSASQLPQI 410 Query: 484 IG 485 +G Sbjct: 411 LG 412 Score = 32.8 bits (73), Expect = 0.64, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 592 ILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGR 642 +L FK + + + V D D+ + N L+ + + G+ + Q GR Sbjct: 685 VLDAFKTSKDNRLLIATSVADEGIDIVQCN-LVVLYEYSGNVTKMIQVRGR 734 >4A2Q-A nrPDB Length = 797 Score = 36.7 bits (83), Expect = 0.036, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 95/302 (31%), Gaps = 23/302 (7%) Query: 192 PVIRECRLRNSEGEATELITETFTSKSAISKTAESSGGPSTSRVTDPQGKSDIPMDLFDF 251 P I C + + E E + I+E + + I+K E + + Sbjct: 126 PYISTCLI-DRECEEIQQISENRSKAAGITKLIECLCRSDKEHWPKSLQLALDTTGYYRA 184 Query: 252 YEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLK 311 E D E+ ++ + + ++ +E E + + + + Sbjct: 185 SELWDIREDNAKDVDSEMTDASEDCLEASMTYSEEAEPDDNLSENLGSAAEGIGKPPPVY 244 Query: 312 PTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTV--------RKRCLV 363 T R YQ + L + NG+ + +I P G+GK+ V + C RK +V Sbjct: 245 ETKKARSYQIE-LAQPAINGK--NALICAPTGSGKTFVSI-LICEHHFQNMPAGRKAKVV 300 Query: 364 LGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEA 423 + V V + + + S + I ++ T + + Sbjct: 301 FLATKVPVYEQQKNVFKHHFERQGYSVQGISGENFSNVSVEKVIEDSDIIVVTPQILVNS 360 Query: 424 ERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFL 483 + LMI DE H T + +T L ++ + L + Sbjct: 361 FEDGTLTSLSIFTLMIFDECHN----------TTGNHPYNVLMTRYLEQKFNSASQLPQI 410 Query: 484 IG 485 +G Sbjct: 411 LG 412 Score = 32.4 bits (72), Expect = 0.67, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 592 ILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGR 642 +L FK + + + V D D+ + N L+ + + G+ + Q GR Sbjct: 685 VLDAFKTSKDNRLLIATSVADEGIDIVQCN-LVVLYEYSGNVTKMIQVRGR 734 >4BPB-A nrPDB Length = 698 Score = 36.3 bits (82), Expect = 0.054, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 592 ILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGR 642 IL FK + N + + V D D+ + N++I + + G+ + Q GR Sbjct: 454 ILDAFKASGDHNILIATSVADEGIDIAQCNLVI-LYEYVGNVIKMIQTRGR 503 Score = 35.5 bits (80), Expect = 0.084, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 95/281 (33%), Gaps = 47/281 (16%) Query: 310 LKPTAVLRPYQ-EKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACT---------VRK 359 KP R YQ E +L M + ++ +I P G GK+ V + C + Sbjct: 12 FKP----RNYQLELALPAM----KGKNTIICAPTGCGKTFVSL-LICEHHLKKFPQGQKG 62 Query: 360 RCLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKR 419 + + N EQ K+ F + ++ + + + + ++ T + Sbjct: 63 KVVFFANQIPVYEQNKSVFSKYFERHGYRVTGISGATAEN-VPVEQIVENNDIIILTPQI 121 Query: 420 SWEAERVMEWLKTQEWGLMILDEVHTIPAK------MFRRVLTIVQA-----HCKLGLTA 468 + + LMI DE H + MF + + +GLTA Sbjct: 122 LVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTA 181 Query: 469 TLVREDDKIVDLNFLIGPKL-----------YEANWMELQNNGYIAKVQCAEVWCPMSPE 517 ++ D K D KL + N EL+ Y + +V +S + Sbjct: 182 SVGVGDAKTTDEALDYICKLCASLDASVIATVKHNLEELEQVVYKPQKFFRKVESRISDK 241 Query: 518 FY---REYVAIKT--KKRILLYTMNPNKFRACQFLIKFHER 553 F + + KRI N ++ + +F + +E+ Sbjct: 242 FKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQ 282 >1YKS-A nrPDB Length = 440 Score = 35.5 bits (80), Expect = 0.081, Method: Composition-based stats. Identities = 71/341 (20%), Positives = 108/341 (31%), Gaps = 60/341 (17%) Query: 331 GRARSGVIVLPCGAGKS---LVGVTAACTVRK-RCLVLGNSAVSVEQWKAQFKMWSTIDD 386 + + V+ GAGK+ L + A C R+ R LVL + V + + K F Sbjct: 6 KKGMTTVLDFHPGAGKTRRFLPQILAECARRRLRTLVLAPTRVVLSEMKEAFHGLDVKFH 65 Query: 387 SQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTI 446 +Q ++ A TY ML T +WE ++I+DE H + Sbjct: 66 TQAFSAHGSGREVIDAMCHATLTYRMLEPTRVVNWE--------------VIIMDEAHFL 111 Query: 447 -PAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIGPKLYEANWMELQNNGYIAKV 505 PA + R G A R ++ L P + NG I V Sbjct: 112 DPASIAAR-----------GWAAHRARANESATILMTATPPGTSDEFPHS---NGEIEDV 157 Query: 506 QCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPN-----KFRACQFLIKFHERRNDKIIV 560 Q P P T +L P RA + + ++V Sbjct: 158 QTD---IPSEP--------WNTGHDWILADKRPTAWFLPSIRAANVMAASLRKAGKSVVV 206 Query: 561 FADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEA 620 F + I+ KP T E L + T F + D Sbjct: 207 LNRKTFEREYPTIKQKKPDFILATDIAEMGANLCVERVLD-CRTAFKPVLVDEG-----R 260 Query: 621 NVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYS 661 V I+ S AQR GR+ R + ++++YS Sbjct: 261 KVAIK-GPLRISASSAAQRRGRIGR----NPNRDGDSYYYS 296 >1C4O-A nrPDB Length = 664 Score = 34.4 bits (77), Expect = 0.22, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 15/151 (9%) Query: 539 NKFRACQFLIKFHERRNDKIIVFADNVFALKEYA-----IRLNKPYIYGPTSQGERMQIL 593 N+ I+ R ++ +V V +E + Y++ +R ++ Sbjct: 423 NQILDLMEGIRERAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKRQALI 482 Query: 594 QNFKHNPKINTIFISKVGDTSFDLPEANVLIQI----SSHGGSRRQEAQRLGRVLRAKKG 649 ++ + + + + D+PE +++ + S R Q +GR R +G Sbjct: 483 RDLRL-GHYDCLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNARG 541 Query: 650 MVAEEYNAFFYSLVSQDTQEMAYSTKRQRFL 680 V + VS+ Q T R+R L Sbjct: 542 EVW-----LYADRVSEAMQRAIEETNRRRAL 567 >4A36-A nrPDB Length = 556 Score = 34.4 bits (77), Expect = 0.22, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 58/177 (32%), Gaps = 22/177 (12%) Query: 317 RPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTV--------RKRCLVLGNSA 368 R YQ + L + NG+ + +I P G+GK+ V + C RK +V + Sbjct: 9 RSYQIE-LAQPAINGK--NALICAPTGSGKTFVSI-LICEHHFQNMPAGRKAKVVFLATK 64 Query: 369 VSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEAERVME 428 V V + + + S + I ++ T + + Sbjct: 65 VPVYEQQKNVFKHHFERQGYSVQGISGENFSNVSVEKVIEDSDIIVVTPQILVNSFEDGT 124 Query: 429 WLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFLIG 485 + LMI DE H T + +T L ++ + L ++G Sbjct: 125 LTSLSIFTLMIFDECHN----------TTGNHPYNVLMTRYLEQKFNSASQLPQILG 171 Score = 32.8 bits (73), Expect = 0.64, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 592 ILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGR 642 +L FK + + + V D D+ + N L+ + + G+ + Q GR Sbjct: 444 VLDAFKTSKDNRLLIATSVADEGIDIVQCN-LVVLYEYSGNVTKMIQVRGR 493 >3CRV-A nrPDB Length = 551 Score = 34.0 bits (76), Expect = 0.25, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 314 AVLRPYQEKSLRKMFGNGRARSGVIVL--PCGAGKSLVGVTAACTVRKRCLVLGNS 367 LR +QEK L+ G + ++ L P G+GK+L + + V+ + L + + Sbjct: 2 VKLRDWQEK-LKDKVIEGLRNNFLVALNAPTGSGKTLFSLLVSLEVKPKVLFVVRT 56 >3I62-A nrPDB Length = 563 Score = 32.4 bits (72), Expect = 0.77, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Query: 581 YGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRL 640 +G +Q +R +++ FK + + + + VG D P + ++QI R+ Sbjct: 373 HGKITQNKRTSLVKRFKKD-ESGILVCTDVGARGMDFPNVHEVLQIGVPSELA-NYIHRI 430 Query: 641 GRVLRAKK 648 GR R+ K Sbjct: 431 GRTARSGK 438 >3SQW-A nrPDB Length = 579 Score = 32.4 bits (72), Expect = 0.84, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Query: 581 YGPTSQGERMQILQNFKHNPKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRL 640 +G +Q +R +++ FK + + + + VG D P + ++QI R+ Sbjct: 322 HGKITQNKRTSLVKRFKKD-ESGILVCTDVGARGMDFPNVHEVLQIGVPSELA-NYIHRI 379 Query: 641 GRVLRAKK 648 GR R+ K Sbjct: 380 GRTARSGK 387 >6FTX-W nrPDB Length = 878 Score = 31.7 bits (70), Expect = 1.4, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 71/175 (40%), Gaps = 16/175 (9%) Query: 516 PEFYREYVAIKTKKRILLYTMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAIRL 575 ++++ + R L M+ K L+ ++ ++++F+ V L L Sbjct: 479 ERVLQKFMTRENVLRGL--IMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYL 536 Query: 576 NKPYIY-----GPTSQGERMQILQNFKHNPKINTIFI--SKVGDTSFDLPEANVLIQISS 628 + I G +R + +F + +F+ ++ G +L A+ ++ S Sbjct: 537 SIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDS 596 Query: 629 HGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDT-QEMAYSTKRQRFLVD 682 + + + Q + R R + ++ + Y LVS+DT +E R++ +++ Sbjct: 597 DW-NPQADLQAMARAHR-----IGQKNHVMVYRLVSKDTVEEEVLERARKKMILE 645 >6C90-A nrPDB Length = 734 Score = 31.3 bits (69), Expect = 1.6, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 78/217 (35%), Gaps = 42/217 (19%) Query: 243 DIPMDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSV 302 D +F ++++ E+ + VK + +E ++ + P +Y Sbjct: 3 DTDEPIFGKKPRIEESITEDLSLADLMPRVKVQSVETVEGCTHEVALPAEEDY------- 55 Query: 303 NPDINIDLKPTA---------VLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVG--- 350 + LKP +L +Q ++++ + N +S ++ AGK++ Sbjct: 56 -----LPLKPRVGKAAKEYPFILDAFQREAIQCVDNN---QSVLVSAHTSAGKTVCAEYA 107 Query: 351 VTAACTVRKRCLVLGNSAVSVEQ-WKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAIST 409 + A ++R + Q ++ ++ + + T D P + ++T Sbjct: 108 IALALREKQRVIFTSPIKALSNQKYREMYEEFQD-----VGLMTGDVTINPTASCLVMTT 162 Query: 410 YSMLGHTTKRSWEAERVMEWLKTQEWGLMILDEVHTI 446 +L R E R + W +I DE+H + Sbjct: 163 -EILRSMLYRGSEVMREVAW--------VIFDEIHYM 190 >4GGP-A nrPDB Length = 401 Score = 31.3 bits (69), Expect = 1.7, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 15/126 (11%) Query: 264 ETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVNPDINIDLKPTAVLRPYQEKS 323 + S E+K ++IEE +K+ I L Y + D + + +VL+P+ Sbjct: 118 DGDAFSDEIKAQVIEEAKKKGIKF---DLIVYSLASPVRT-DPDTGIMHKSVLKPF---- 169 Query: 324 LRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKAQFKMWST 383 G+ +G V P + A V E+W Q Sbjct: 170 -------GKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGGEDWERWIKQLSKEGL 222 Query: 384 IDDSQI 389 +++ I Sbjct: 223 LEEGCI 228 >3P4X-A nrPDB Length = 413 Score = 31.3 bits (69), Expect = 1.7, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 28/66 (42%), Gaps = 3/66 (4%) Query: 332 RARSGVIVLPCGAGKSLVGVTAACTVR---KRCLVLGNSAVSVEQWKAQFKMWSTIDDSQ 388 + +S +V P G GK+ G+ A + K+ ++ + V+Q + + + Sbjct: 34 QGKSFTMVAPTGVGKTTFGMMTALWLARKGKKSALVFPTVTLVKQTLERLQKLADEKVKI 93 Query: 389 ICRFTS 394 ++S Sbjct: 94 FGFYSS 99 >4P9G-A nrPDB Length = 197 Score = 31.3 bits (69), Expect = 1.7, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 27/94 (28%) Query: 30 PGNDPQEAVPSAAGKQVDESGTKVDEYGAKDYRLQMPLKDDHTSRPLWVAPDGHIFLEAF 89 P P+ +P+AA +D R +P + SRPLW++P + Sbjct: 42 PDALPEAYIPNAA---------------TEDERYYVPFTETVASRPLWISPQQN------ 80 Query: 90 SPVYKYAQDFLVAIAEPVCRPTHVHEYKLTAYSL 123 ++ L A V R H H +++ AY++ Sbjct: 81 ----RWCDILLAREAGLVNR--HYHPHEVFAYTI 108 >5OFK-A nrPDB Length = 339 Score = 30.9 bits (68), Expect = 2.2, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 7/54 (12%) Query: 490 EANWMELQNNGYIAKVQCAEVWC----PMSPEFYREYVAIKTKKRILLYTMNPN 539 + W E+ YI K A +W P + FY +Y +KKR +Y M N Sbjct: 155 RSTWYEICGPEYIEK---AFIWAHEADPNAKLFYNDYNTEISKKRDFIYNMVKN 205 >3MWY-W nrPDB Length = 800 Score = 30.9 bits (68), Expect = 2.4, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 64/156 (41%), Gaps = 14/156 (8%) Query: 535 TMNPNKFRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIY-----GPTSQGER 589 M+ K L+ ++ ++++F+ V L L+ I G +R Sbjct: 552 IMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQR 611 Query: 590 MQILQNFKHNPKINTIFI--SKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAK 647 + +F + +F+ ++ G +L A+ ++ S + + + Q + R R Sbjct: 612 RISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDW-NPQADLQAMARAHR-- 668 Query: 648 KGMVAEEYNAFFYSLVSQDT-QEMAYSTKRQRFLVD 682 + ++ + Y LVS+DT +E R++ +++ Sbjct: 669 ---IGQKNHVMVYRLVSKDTVEEEVLERARKKMILE 701 >4G8T-A nrPDB Length = 464 Score = 30.1 bits (66), Expect = 4.3, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 52/177 (29%), Gaps = 26/177 (14%) Query: 223 TAESSGGPSTSRVTDPQGKSDIPMDLFDFYEQMDKD------EEEEEETQTVSFEVKQEM 276 + G S + D Q + + M + F+ K +E + ++ M Sbjct: 142 LGQFLGVTVASLLGDGQQRDAVEMLGYLFFIGDRKKTTLAYQNQENDPCDWYRVRHEEAM 201 Query: 277 IEELQKRCIHLEYPLLAEYDFRN--------------DSVNPDINIDLKPTAVLRPYQEK 322 E R Y +Y F + ++V L P Sbjct: 202 TPESVVRLAEAAY---EKYGFNDFKLKGGVLDGFEEAEAVTALAKRFPDARITLDPNGAW 258 Query: 323 SLRKMFGNGRARSGVIVL---PCGAGKSLVGVTAACTVRKRCLVLGNSAVSVEQWKA 376 SL + G+ GV+ PCGA + G R+ + + + W+ Sbjct: 259 SLDEAVKIGKQLKGVLAYAEDPCGAEQGYSGREIMAEFRRATGLPTATNMIATDWRQ 315 >1R6B-X nrPDB Length = 758 Score = 29.7 bits (65), Expect = 5.0, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 18/118 (15%) Query: 86 LEAFSPVYKYAQDFLVAIAEPV-----CRPTHVHEYKLTAYSLYAAVSVGLQTSDITEYL 140 +EA + K A+ L +PV PT V + ++T L A+ + L D++EY+ Sbjct: 467 IEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTV-QLSKALGIELLRFDMSEYM 525 Query: 141 RK--LSK-TGVPDGIMQFIKLCTVSYGKVKLVLKHNRYF-----VESCHPDVIQHLLQ 190 + +S+ G P G + F + ++ V+KH +E HPDV LLQ Sbjct: 526 ERHTVSRLIGAPPGYVGFDQGGLLT----DAVIKHPHAVLLLDEIEKAHPDVFNILLQ 579 >3ZUQ-A nrPDB Length = 906 Score = 29.7 bits (65), Expect = 5.4, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 115 EYKLTAYSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIMQFIKLCTVSYGKVKLV 169 +Y+ YS ++ + +DI L + + D I FI C+VSY K++ Sbjct: 770 KYRYNIYSEKEKSNINIDFNDINSKLNEGINQAI-DNINNFINGCSVSYLMKKMI 823 >2XHL-B nrPDB Length = 433 Score = 29.7 bits (65), Expect = 5.4, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Query: 115 EYKLTAYSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIMQFIKLCTVSYGKVKLV 169 +Y+ YS ++ + +DI L + + D I FI C+VSY K++ Sbjct: 297 KYRYNIYSEKEKSNINIDFNDINSKLNEGINQAI-DNINNFINGCSVSYLMKKMI 350 >4MWI-A nrPDB Length = 294 Score = 29.4 bits (64), Expect = 5.9, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 42/102 (41%), Gaps = 9/102 (8%) Query: 612 DTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLVSQDTQEMA 671 D + P+ +++++ G+ R+ R + K+ ++ Y L + E+ Sbjct: 94 DETVTPPQFSIVMEYCE-LGTLRELLDREKDLTLGKRMVLVLGAARGLYRLHHSEAPELH 152 Query: 672 YSTKRQRFLVDQGYSFKVITKLAGME----EEDLAFSTKEEQ 709 + FLV QGY K LAG E + ++ T E+ Sbjct: 153 GKIRSSNFLVTQGYQVK----LAGFELRKTQTSMSLGTTREK 190 >6C9M-B nrPDB Length = 236 Score = 29.4 bits (64), Expect = 7.3, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 26/58 (44%), Gaps = 4/58 (6%) Query: 694 AGMEEEDLAFSTKEEQQQLLQKVLAATDLDAEEEVVAGEFGSRSSQASRRFGTMSSMS 751 G+ L++ ++E +++ VLA + D ++ G +S A +R ++ Sbjct: 35 HGLSWPQLSYIAEDENGKIVGYVLAKMEEDPDDV----PHGHITSLAVKRSHRRLGLA 88 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.126 0.330 Lambda K H 0.267 0.0383 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,828,528 Number of Sequences: 36641 Number of extensions: 1099170 Number of successful extensions: 3746 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 51 Number of HSP's that attempted gapping in prelim test: 3573 Number of HSP's gapped (non-prelim): 145 length of query: 782 length of database: 10,336,785 effective HSP length: 105 effective length of query: 677 effective length of database: 6,489,480 effective search space: 4393377960 effective search space used: 4393377960 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 63 (29.0 bits)