BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P18760 (166 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5L6W-C nrPDB 330 2e-91 5YU8-H nrPDB 281 9e-77 1AK7-A nrPDB 239 6e-64 1QPV-A nrPDB 103 4e-23 1CNU-A nrPDB 98 1e-21 2I2Q-A nrPDB 96 8e-21 5IVU-A nrPDB 87 4e-18 1F7S-A nrPDB 83 5e-17 2L72-A nrPDB 71 3e-13 2MOT-A nrPDB 70 3e-13 2MV2-A nrPDB 67 4e-12 2XFA-A nrPDB 62 2e-10 2LJ8-A nrPDB 55 2e-08 2KVK-A nrPDB 54 2e-08 3Q2B-A nrPDB 51 3e-07 2MP4-A nrPDB 50 6e-07 2LXX-A nrPDB 49 9e-07 1M4J-A nrPDB 44 3e-05 2VAC-A nrPDB 44 4e-05 1V6F-A nrPDB 32 0.19 3L50-A nrPDB 29 0.78 4JD2-H nrPDB 29 0.78 1SGF-G nrPDB 29 1.2 4QVU-A nrPDB 28 1.6 3CFV-B nrPDB 28 2.0 1EV1-1 nrPDB 28 2.0 1HQZ-1 nrPDB 28 2.0 1FNN-A nrPDB 27 2.9 5W36-A nrPDB 27 3.8 3EU9-A nrPDB 27 4.0 2R9V-A nrPDB 27 4.9 1QZ1-A nrPDB 26 6.4 1EPF-A nrPDB 26 7.3 4LIZ-A nrPDB 26 8.6 1VPK-A nrPDB 26 9.0 4EN7-A nrPDB 26 9.3 1UFH-A nrPDB 26 9.8 >5L6W-C nrPDB Length = 167 Score = 330 bits (845), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 163/166 (98%), Positives = 164/166 (98%) Query: 1 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDV 60 MA GVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDV Sbjct: 2 MACGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDV 61 Query: 61 GQTVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASS 120 GQTVDDPY TFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPE+APLKSKMIYASS Sbjct: 62 GQTVDDPYATFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASS 121 Query: 121 KDAIKKKLTGIKHELQANCYEEVKDRCTLAEKLGGSAVISLEGKPL 166 KDAIKKKLTGIKHELQANCYEEVKDRCTLAEKLGGSAVISLEGKPL Sbjct: 122 KDAIKKKLTGIKHELQANCYEEVKDRCTLAEKLGGSAVISLEGKPL 167 >5YU8-H nrPDB Length = 166 Score = 281 bits (719), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 136/166 (81%), Positives = 150/166 (90%) Query: 1 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDV 60 MASGV V+D VIKVFNDMKVRKSSTPEE+KKRKKAVLFCLS+DKK II+EE K+ILVGD+ Sbjct: 1 MASGVTVNDEVIKVFNDMKVRKSSTPEEIKKRKKAVLFCLSDDKKQIIVEEAKQILVGDI 60 Query: 61 GQTVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASS 120 G TV+DPYT FVK+LP DCRYALYDATYETKESKKEDLVFIFWAPE+APLKSKMIYASS Sbjct: 61 GDTVEDPYTAFVKLLPLNDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASS 120 Query: 121 KDAIKKKLTGIKHELQANCYEEVKDRCTLAEKLGGSAVISLEGKPL 166 KDAIKKK TGIKHE Q N +++KDR TL EKLGG+ V+SLEGKPL Sbjct: 121 KDAIKKKFTGIKHEWQVNGLDDIKDRSTLGEKLGGNVVVSLEGKPL 166 >1AK7-A nrPDB Length = 174 Score = 239 bits (609), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 117/165 (70%), Positives = 139/165 (84%), Gaps = 1/165 (0%) Query: 2 ASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVG 61 ASGV V+D V ++F DMKVRK STPEE+KKRKKAV+FCLS DKK II+EEGKEILVGDVG Sbjct: 11 ASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDVG 70 Query: 62 QTVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASSK 121 T+ DP+ FV MLP+KDCRYALYDA++ETKES+KE+L+F WAPE APLKSKMIYASSK Sbjct: 71 VTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASSK 130 Query: 122 DAIKKKLTGIKHELQANCYEEVKDRCTLAEKLGGSAVISLEGKPL 166 DAIKKK GIKHE QAN E++ +R +AEKLGGS +++ EG P+ Sbjct: 131 DAIKKKFQGIKHECQANGPEDL-NRACIAEKLGGSLIVAFEGCPV 174 >1QPV-A nrPDB Length = 143 Score = 103 bits (257), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 54/143 (37%), Positives = 84/143 (58%), Gaps = 21/143 (14%) Query: 3 SGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQ 62 SGVAV+D + FND+K+ K+ K +LF L++ K I+++E Sbjct: 4 SGVAVADESLTAFNDLKL---------GKKYKFILFGLNDAKTEIVVKE----------T 44 Query: 63 TVDDPYTTFVKMLPDKDCRYALYDATYETK--ESKKEDLVFIFWAPENAPLKSKMIYASS 120 + D Y F++ LP+ DC YA+YD YE E K+ +VF W+P+ AP++SKM+YASS Sbjct: 45 STDPSYDAFLEKLPENDCLYAIYDFEYEINGNEGKRSKIVFFTWSPDTAPVRSKMVYASS 104 Query: 121 KDAIKKKLTGIKHELQANCYEEV 143 KDA+++ L G+ ++Q + EV Sbjct: 105 KDALRRALNGVSTDVQGTDFSEV 127 >1CNU-A nrPDB Length = 137 Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 51/143 (35%), Positives = 84/143 (58%), Gaps = 18/143 (12%) Query: 3 SGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQ 62 SG+AVSD ++ FN++K+ + + V F ++ +++E VG Sbjct: 1 SGIAVSDDCVQKFNELKL---------GHQHRYVTFKMNASNTEVVVEH-----VGGPNA 46 Query: 63 TVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASSKD 122 T +D F LP++DCRYA++D ++ ++ + FI WAP++AP+KSKM+Y S+KD Sbjct: 47 TYED----FKSQLPERDCRYAIFDYEFQVDGGQRNKITFILWAPDSAPIKSKMMYTSTKD 102 Query: 123 AIKKKLTGIKHELQANCYEEVKD 145 +IKKKL GI+ E+QA E+ + Sbjct: 103 SIKKKLVGIQVEVQATDAAEISE 125 >2I2Q-A nrPDB Length = 137 Score = 95.9 bits (237), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 50/141 (35%), Positives = 84/141 (59%), Gaps = 19/141 (13%) Query: 3 SGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQ 62 SGV VS ++ F ++K+ KS + V+F +++ K I++E+ + Sbjct: 4 SGVKVSPECLEAFQELKLGKSL---------RYVVFKMNDTKTEIVVEK----------K 44 Query: 63 TVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASSKD 122 + D + TF+ LP+KDCRYA+YD + E + ++FI W+P+ AP+KSKM+Y+SSKD Sbjct: 45 STDKDFDTFLGDLPEKDCRYAIYDFEFNLGEGVRNKIIFISWSPDVAPIKSKMVYSSSKD 104 Query: 123 AIKKKLTGIKHELQANCYEEV 143 +++ TGI ++QA + EV Sbjct: 105 TLRRAFTGIGTDIQATDFSEV 125 >5IVU-A nrPDB Length = 141 Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 21/149 (14%) Query: 3 SGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQ 62 SGV ++D ++ + +K+ K+ K ++F L++ E EI V Sbjct: 5 SGVTLNDACVETYQQLKL---------GKKLKYIIFHLNK--------ENTEIAVEKSSD 47 Query: 63 TVDDPYTTFVKMLPDKDCRYALYDATYETKES--KKEDLVFIFWAPENAPLKSKMIYASS 120 +VD Y F+ LP+ +CR+A+YD YE +E K+ L F+ WAP++A +K KM YASS Sbjct: 48 SVD--YDNFLADLPEDECRWAVYDLEYEKEEGAGKRNKLTFVSWAPDSAKMKQKMAYASS 105 Query: 121 KDAIKKKLTGIKHELQANCYEEVKDRCTL 149 KD +++ LTGI E+Q + EV L Sbjct: 106 KDILRRALTGIAVEIQGTDFSEVAHENVL 134 >1F7S-A nrPDB Length = 139 Score = 83.2 bits (204), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 50/138 (36%), Positives = 79/138 (57%), Gaps = 19/138 (13%) Query: 2 ASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVG 61 ASG+AV D F ++K +++ + +++ + E +K +++E+ VG Sbjct: 5 ASGMAVHDDCKLRFLELKAKRTH---------RFIVYKIEEKQKQVVVEK--------VG 47 Query: 62 QTVDDPYTTFVKMLPDKDCRYALYDATYETKES-KKEDLVFIFWAPENAPLKSKMIYASS 120 Q + Y F LP +CRYA+YD + T E+ +K + FI W P+ A ++SKMIYASS Sbjct: 48 QPIQ-TYEEFAACLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASS 106 Query: 121 KDAIKKKLTGIKHELQAN 138 KD K++L GI+ ELQA Sbjct: 107 KDRFKRELDGIQVELQAT 124 >2L72-A nrPDB Length = 139 Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 30/130 (23%) Query: 1 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDV 60 MASG+ V + + FN++K+RK+ K ++F + E+ K ++ ++GK G+ Sbjct: 22 MASGMGVDENCVARFNELKIRKTV---------KWIVFKI-ENTKIVVEKDGK----GNA 67 Query: 61 GQTVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASS 120 + F LP DCR+ +YD + + F+ W P+NAP+K +M YASS Sbjct: 68 DE--------FRGALPANDCRFGVYDCGNKIQ--------FVLWCPDNAPVKPRMTYASS 111 Query: 121 KDAIKKKLTG 130 KDA+ KKL G Sbjct: 112 KDALLKKLDG 121 >2MOT-A nrPDB Length = 118 Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 30/130 (23%) Query: 1 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDV 60 MASG+ V + + FN++K+RK+ K ++F + E+ K ++ ++GK G+ Sbjct: 1 MASGMGVDENCVARFNELKIRKTV---------KWIVFKI-ENTKIVVEKDGK----GNA 46 Query: 61 GQTVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASS 120 + F LP DCR+ +YD + + F+ W P+NAP+K +M YASS Sbjct: 47 DE--------FRGALPANDCRFGVYDCGNKIQ--------FVLWCPDNAPVKPRMTYASS 90 Query: 121 KDAIKKKLTG 130 KDA+ KKL G Sbjct: 91 KDALLKKLDG 100 >2MV2-A nrPDB Length = 148 Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 55/146 (37%), Positives = 75/146 (51%), Gaps = 26/146 (17%) Query: 1 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKA--VLFCLSEDKKNIILEEGKEILVG 58 MASGV VSD V K +T EE+KK KK V+F + D+K I +E V Sbjct: 1 MASGVTVSD-VCK----------TTYEEIKKDKKHRYVIFYI-RDEKQIDVE-----TVA 43 Query: 59 DVGQTVDDPYTTFVKMLPDKDCRYALYDATY------ETKESKKEDLVFIFWAPENAPLK 112 D D K P +CRY L+D Y ++ SKK+ L + W P+ A +K Sbjct: 44 DRNAEYDQFLEDIQKCGPG-ECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVK 102 Query: 113 SKMIYASSKDAIKKKLTGIKHELQAN 138 KM+Y+SS DA+KK L G++ +QA Sbjct: 103 KKMLYSSSFDALKKSLVGVQKYIQAT 128 >2XFA-A nrPDB Length = 148 Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 18/142 (12%) Query: 1 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNII--LEEGKEILVG 58 M SGV VSD I FN +KV K K +++ + +K ++ LE E+ Sbjct: 6 MVSGVNVSDECIYEFNRLKV---------KHLNKYIIYKIENLEKIVVDVLEHDMEL--- 53 Query: 59 DVGQTVDDPYTTFVKMLPDKDCRYALYDATYETKESKKED-LVFIFWAPENAPLKSKMIY 117 ++D+ L + +CRY + D T E D + FIFW+P + K KM+Y Sbjct: 54 ---TSLDNIIMRIKNNLKNTECRYIIADMPIPTPEGVLRDRIYFIFWSPGLSKPKEKMLY 110 Query: 118 ASSKDAIKKKLTGIKHELQANC 139 A+SK+++ +K+ GI L+ C Sbjct: 111 AASKESLVRKINGIFKSLEITC 132 >2LJ8-A nrPDB Length = 144 Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 70/136 (51%), Gaps = 21/136 (15%) Query: 3 SGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQ 62 SGV+V+D + ND++ +KS + ++ + D+K+I ++ +G+ G Sbjct: 12 SGVSVADECVTALNDLRHKKS---------RYVIMHIV--DQKSIAVKT-----IGERGA 55 Query: 63 TVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASSKD 122 D K +P C YA +D Y T + ++ L+ I W P++ ++KM+Y+SS+D Sbjct: 56 NFDQFIEAIDKNVP---C-YAAFDFEYTTNDGPRDKLILISWNPDSGAPRTKMLYSSSRD 111 Query: 123 AIKKKLTGIKHELQAN 138 A+ G + +QAN Sbjct: 112 ALVPLTQGFQG-IQAN 126 >2KVK-A nrPDB Length = 144 Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 20/136 (14%) Query: 3 SGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQ 62 SGV + + V +D++++KS + V+ C+ D GK+I V +VG+ Sbjct: 4 SGVTLEESVRGAIDDLRMKKS----------RYVMMCIGAD--------GKKIEVTEVGE 45 Query: 63 TVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASSKD 122 + K +K C Y +D Y SK+E L+ I W P+ A + KM+Y++S+D Sbjct: 46 RSVNYTDLKEKFSTEKPC-YVAFDFEYNDAGSKREKLILIQWIPDTARPREKMMYSASRD 104 Query: 123 AIKKKLTGIKHELQAN 138 A+ G +QAN Sbjct: 105 ALSSVSEGY-LPIQAN 119 >3Q2B-A nrPDB Length = 124 Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 26/132 (19%) Query: 1 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDV 60 M SG+ V+D + FN+MK+RK+ ++F + ++ + II +G + ++ Sbjct: 3 MISGIRVNDNCVTEFNNMKIRKTCGW---------IIFVI-QNCEIIIHSKGASTTLTEL 52 Query: 61 GQTVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASS 120 Q++D + C Y ++DA + F +A E++ + +M YASS Sbjct: 53 VQSIDKN--------NEIQCAYVVFDAVSKIH--------FFMYARESSNSRDRMTYASS 96 Query: 121 KDAIKKKLTGIK 132 K AI KK+ G+ Sbjct: 97 KQAILKKIEGVN 108 >2MP4-A nrPDB Length = 165 Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 27/170 (15%) Query: 1 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEG-KEILVGD 59 M+SGV V V F + E +K + ++F + E+K +I+E + +G Sbjct: 1 MSSGVMVDPDVQTSFQKL--------SEGRKEYRYIIFKIDENK--VIVEAAVTQDQLGI 50 Query: 60 VGQTVDDPY-TTFVKMLPD--------KDCRYALYDATYETKE-----SKKEDLVFIFWA 105 G DD F K + D DCRYA++D + SK + ++F+ Sbjct: 51 TGDDYDDSSKAAFDKFVEDVKSRTDNLTDCRYAVFDFKFTCSRVGAGTSKMDKIIFLQIC 110 Query: 106 PENAPLKSKMIYASSKDAIKKKL-TGIKHELQANCYEEVKDRCTLAEKLG 154 P+ A +K KM+YASS AIK L TG + Q + E+ + L KLG Sbjct: 111 PDGASIKKKMVYASSAAAIKTSLGTGKILQFQVSDESEMSHK-ELLNKLG 159 >2LXX-A nrPDB Length = 152 Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 13/98 (13%) Query: 55 ILVGDVGQTVDDPYTTFV----KMLPD-KDCRYALYDATYETKESKKED------LVFIF 103 I+V VG+ + PY FV K++ D K+CRYA D + E ++F+ Sbjct: 38 IVVEKVGEK-NAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQ 96 Query: 104 WAPENAPLKSKMIYASSKDAIKKKLTGIKHELQANCYE 141 + P+NAP++ +M+YASS A+K L G++ Q E Sbjct: 97 YCPDNAPVRRRMLYASSVRALKASL-GLESLFQVQASE 133 >1M4J-A nrPDB Length = 142 Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 8/99 (8%) Query: 51 EGKEILVGDVGQTVD---DPYTTFV-KMLPDKDCRYALYDATYETKESKKEDLVFIFWAP 106 E ++++VG D Y +FV +L DK Y L+ +++ ++ + +FI W+P Sbjct: 33 ENEQLVVGSCSPPSDSWEQDYDSFVLPLLEDKQPCYVLF--RLDSQNAQGYEWIFIAWSP 90 Query: 107 ENAPLKSKMIYASSKDAIKKKLTG--IKHELQANCYEEV 143 +++ ++ KM+YA+++ +KK+ G IK E+ E+V Sbjct: 91 DHSHVRQKMLYAATRATLKKEFGGGHIKDEVFGTVKEDV 129 >2VAC-A nrPDB Length = 134 Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 8/93 (8%) Query: 60 VGQTVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYAS 119 VG+ D + +L + Y LY +++ ++ + +F+ W+P+N+P++ KM+YA+ Sbjct: 43 VGRWDQDYDRAVLPLLDAQQPCYLLY--RLDSQNAQGFEWLFLAWSPDNSPVRLKMLYAA 100 Query: 120 SKDAIKKKLTG--IKHELQANCYEEVKDRCTLA 150 ++ +KK+ G IK EL + VKD + A Sbjct: 101 TRATVKKEFGGGHIKDEL----FGTVKDDLSFA 129 >1V6F-A nrPDB Length = 151 Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust. Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 75 LPDKDCRYALYDATYETKESK-KEDLVFIFWAPENAPLKSKMIYASSKDAI 124 LP++ R+ +Y Y+ + + L FIF +P + +M+YA SK+ + Sbjct: 67 LPERQPRFIVYSYKYQHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKL 117 >3L50-A nrPDB Length = 136 Score = 29.3 bits (64), Expect = 0.78, Method: Compositional matrix adjust. Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 75 LPDKDCRYALYDATYETKESK-KEDLVFIFWAPENAPLKSKMIYASSKDAI 124 LP++ R+ +Y Y + + L FIF +P + +M+YA SK+ + Sbjct: 57 LPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRL 107 >4JD2-H nrPDB Length = 142 Score = 29.3 bits (64), Expect = 0.78, Method: Compositional matrix adjust. Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Query: 75 LPDKDCRYALYDATYETKESK-KEDLVFIFWAPENAPLKSKMIYASSKDAI 124 LP++ R+ +Y Y + + L FIF +P + +M+YA SK+ + Sbjct: 61 LPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRL 111 >1SGF-G nrPDB Length = 237 Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust. Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 16 NDMKVRKSSTPEEVKKRKKAVLFCLSEDK-KNIILEEGKEILVGDVGQTVDDPYTTFVKM 74 ND+ + + S P ++ K + E K + L G + Q DD Y +K+ Sbjct: 95 NDLMLLRLSKPADITDTVKPITLPTEEPKLGSTCLASGWGSITPTKFQFTDDLYCVNLKL 154 Query: 75 LPDKDCRYA 83 LP++DC A Sbjct: 155 LPNEDCAKA 163 >4QVU-A nrPDB Length = 265 Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust. Identities = 14/45 (31%), Positives = 23/45 (51%) Query: 26 PEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYTT 70 PE ++ R A FC E+ +I+ EG I + + T+ D + T Sbjct: 18 PESIRNRSAACPFCDRENLTDILATEGSIIWLKNKFPTLKDTFQT 62 >3CFV-B nrPDB Length = 414 Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust. Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 5/48 (10%) Query: 66 DPYTTFVKMLPDKDCRYALYDAT-----YETKESKKEDLVFIFWAPEN 108 +PY+ F+ D AL+D T ES K+++ + W+P N Sbjct: 284 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHN 331 >1EV1-1 nrPDB Length = 281 Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust. Identities = 13/39 (33%), Positives = 17/39 (43%) Query: 102 IFWAPENAPLKSKMIYASSKDAIKKKLTGIKHELQANCY 140 IFW NAP + + + S +A G H QA Y Sbjct: 170 IFWTEGNAPARMSIPFISIGNAYSNFYDGWSHFSQAGVY 208 >1HQZ-1 nrPDB Length = 141 Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust. Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Query: 68 YTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSK 114 + F+++ + +Y L A S E ++ I W P++APLK++ Sbjct: 52 FHDFLQLFDETKVQYGL--ARVSPPGSDVEKIIIIGWCPDSAPLKTR 96 >1FNN-A nrPDB Length = 389 Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust. Identities = 12/23 (52%), Positives = 16/23 (69%) Query: 21 RKSSTPEEVKKRKKAVLFCLSED 43 RK PE+V+K K VLF +SE+ Sbjct: 259 RKHIAPEDVRKSSKEVLFGISEE 281 >5W36-A nrPDB Length = 325 Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust. Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Query: 2 ASGVAVSDGVIKVFND--MKVRKSSTPEEVKKRKKAVLFCLSEDKKNI 47 ++G V G ++F+D M+ + +TPE + +K +V+F + K++I Sbjct: 104 SAGEVVGFGARRLFDDDAMEAKYVNTPETLLYKKSSVMFGIDLAKRDI 151 >3EU9-A nrPDB Length = 240 Score = 26.9 bits (58), Expect = 4.0, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Query: 80 CRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASSKDAIKKKLTG 130 CR L +A Y+ ++ KE++ + WA N + + Y SK AI +L G Sbjct: 25 CR-ELVEAGYDVRQPDKENVTLLHWAAINNRI-DLVKYYISKGAIVDQLGG 73 >2R9V-A nrPDB Length = 515 Score = 26.6 bits (57), Expect = 4.9, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 5 VAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKN-IILEEGKEILVG 58 + V DG+ + + KV S E V+ K V F L ED IIL E K+I G Sbjct: 44 IQVGDGIARAYGLNKVMVSELVEFVETGVKGVAFNLEEDNVGIIILGEYKDIKEG 98 >1QZ1-A nrPDB Length = 291 Score = 26.2 bits (56), Expect = 6.4, Method: Compositional matrix adjust. Identities = 9/28 (32%), Positives = 18/28 (64%) Query: 12 IKVFNDMKVRKSSTPEEVKKRKKAVLFC 39 +K+F + + + TP+E K+ + AV+ C Sbjct: 95 VKIFQKLMFKNAPTPQEFKEGEDAVIVC 122 >1EPF-A nrPDB Length = 191 Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust. Identities = 9/28 (32%), Positives = 18/28 (64%) Query: 12 IKVFNDMKVRKSSTPEEVKKRKKAVLFC 39 +K+F + + + TP+E K+ + AV+ C Sbjct: 95 VKIFQKLMFKNAPTPQEFKEGEDAVIVC 122 >4LIZ-A nrPDB Length = 142 Score = 25.8 bits (55), Expect = 8.6, Method: Compositional matrix adjust. Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%) Query: 75 LPDKDCRYALYDATYETKESKKEDLVFIFWAPENA--PLKSKMIYASSKDAIKKKLTGIK 132 L + ++A Y +ESK+ VFI WA E P K + + + K +K + Sbjct: 55 LKEDALQFAYYRTISGDEESKRVKFVFISWAGEGIKKP-KLRAVMSILKGDVKNVINNFH 113 Query: 133 HELQANCYEEV 143 EL A +++ Sbjct: 114 IELHATSLDDL 124 >1VPK-A nrPDB Length = 378 Score = 25.8 bits (55), Expect = 9.0, Method: Compositional matrix adjust. Identities = 10/26 (38%), Positives = 16/26 (61%) Query: 114 KMIYASSKDAIKKKLTGIKHELQANC 139 K+I+A++KD + L G+ EL N Sbjct: 152 KVIFAAAKDEFMRNLNGVFWELHKNL 177 >4EN7-A nrPDB Length = 224 Score = 25.8 bits (55), Expect = 9.3, Method: Compositional matrix adjust. Identities = 33/159 (20%), Positives = 54/159 (33%), Gaps = 35/159 (22%) Query: 4 GVAVSDGVIKVFNDMKVRKSSTP---------EEVKKRKKAVLFCLSEDKKNIILEEGKE 54 G ++G + D+++R+++TP EE K +F E E Sbjct: 66 GNISNNGCTAIVGDLRIRETATPYYYPTASFNEEYIKNNVQNVFAN--------FTEASE 117 Query: 55 ILVGDVGQTVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSK 114 I +G F K P Y TY E K +N + Sbjct: 118 IPIG----------FEFSKTAPSNKSLYMYLQYTYIRYEIIK--------VLQNTVTERA 159 Query: 115 MIYASSKDAIKKKLTGIKHELQANCYEEVKDRCTLAEKL 153 ++Y S +K + ++ N Y +D+C L EK Sbjct: 160 VLYVPSLGYVKSIEFNSEEQIDKNFYFTSQDKCILNEKF 198 >1UFH-A nrPDB Length = 180 Score = 25.8 bits (55), Expect = 9.8, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Query: 88 TYETKESKKEDLVFIFWAPENAPLKSKMIYASSKDAIKKKLTGIKHELQA 137 TY TK +E + W PE+A L SK ++ D + + L H L + Sbjct: 42 TYTTKHYAEEKVKAGTWLPEDAQLLSKQVFT---DLLPRGLETPHHHLWS 88 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5L6W-C nrPDB 224 2e-59 5YU8-H nrPDB 218 8e-58 1AK7-A nrPDB 208 7e-55 2I2Q-A nrPDB 148 2e-36 1QPV-A nrPDB 146 4e-36 1CNU-A nrPDB 146 6e-36 5IVU-A nrPDB 137 2e-33 1F7S-A nrPDB 136 5e-33 2XFA-A nrPDB 123 3e-29 2LJ8-A nrPDB 121 1e-28 2MV2-A nrPDB 121 1e-28 2MP4-A nrPDB 118 1e-27 2L72-A nrPDB 114 3e-26 2MOT-A nrPDB 112 5e-26 2KVK-A nrPDB 109 4e-25 2LXX-A nrPDB 103 4e-23 3Q2B-A nrPDB 101 1e-22 1M4J-A nrPDB 96 7e-21 2VAC-A nrPDB 93 5e-20 Sequences not found previously or not previously below threshold: 1V6F-A nrPDB 55 2e-08 3L50-A nrPDB 50 5e-07 4JD2-H nrPDB 49 7e-07 5YNR-A nrPDB 44 4e-05 1HQZ-1 nrPDB 43 5e-05 2W0I-A nrPDB 36 0.009 4LIZ-A nrPDB 34 0.022 3DAW-B nrPDB 34 0.022 2D8B-A nrPDB 34 0.022 2HD7-A nrPDB 34 0.025 5ECU-A nrPDB 27 3.2 1X67-A nrPDB 27 4.2 3CR8-A nrPDB 26 8.5 >5L6W-C nrPDB Length = 167 Score = 224 bits (570), Expect = 2e-59, Method: Composition-based stats. Identities = 163/166 (98%), Positives = 164/166 (98%) Query: 1 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDV 60 MA GVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDV Sbjct: 2 MACGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDV 61 Query: 61 GQTVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASS 120 GQTVDDPY TFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPE+APLKSKMIYASS Sbjct: 62 GQTVDDPYATFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASS 121 Query: 121 KDAIKKKLTGIKHELQANCYEEVKDRCTLAEKLGGSAVISLEGKPL 166 KDAIKKKLTGIKHELQANCYEEVKDRCTLAEKLGGSAVISLEGKPL Sbjct: 122 KDAIKKKLTGIKHELQANCYEEVKDRCTLAEKLGGSAVISLEGKPL 167 >5YU8-H nrPDB Length = 166 Score = 218 bits (556), Expect = 8e-58, Method: Composition-based stats. Identities = 136/166 (81%), Positives = 150/166 (90%) Query: 1 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDV 60 MASGV V+D VIKVFNDMKVRKSSTPEE+KKRKKAVLFCLS+DKK II+EE K+ILVGD+ Sbjct: 1 MASGVTVNDEVIKVFNDMKVRKSSTPEEIKKRKKAVLFCLSDDKKQIIVEEAKQILVGDI 60 Query: 61 GQTVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASS 120 G TV+DPYT FVK+LP DCRYALYDATYETKESKKEDLVFIFWAPE+APLKSKMIYASS Sbjct: 61 GDTVEDPYTAFVKLLPLNDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYASS 120 Query: 121 KDAIKKKLTGIKHELQANCYEEVKDRCTLAEKLGGSAVISLEGKPL 166 KDAIKKK TGIKHE Q N +++KDR TL EKLGG+ V+SLEGKPL Sbjct: 121 KDAIKKKFTGIKHEWQVNGLDDIKDRSTLGEKLGGNVVVSLEGKPL 166 >1AK7-A nrPDB Length = 174 Score = 208 bits (530), Expect = 7e-55, Method: Composition-based stats. Identities = 117/165 (70%), Positives = 139/165 (84%), Gaps = 1/165 (0%) Query: 2 ASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVG 61 ASGV V+D V ++F DMKVRK STPEE+KKRKKAV+FCLS DKK II+EEGKEILVGDVG Sbjct: 11 ASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDVG 70 Query: 62 QTVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASSK 121 T+ DP+ FV MLP+KDCRYALYDA++ETKES+KE+L+F WAPE APLKSKMIYASSK Sbjct: 71 VTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASSK 130 Query: 122 DAIKKKLTGIKHELQANCYEEVKDRCTLAEKLGGSAVISLEGKPL 166 DAIKKK GIKHE QAN E++ +R +AEKLGGS +++ EG P+ Sbjct: 131 DAIKKKFQGIKHECQANGPEDL-NRACIAEKLGGSLIVAFEGCPV 174 >2I2Q-A nrPDB Length = 137 Score = 148 bits (372), Expect = 2e-36, Method: Composition-based stats. Identities = 51/147 (34%), Positives = 85/147 (57%), Gaps = 19/147 (12%) Query: 3 SGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQ 62 SGV VS ++ F ++K+ KS + V+F +++ K I++E+ + Sbjct: 4 SGVKVSPECLEAFQELKLGKSL---------RYVVFKMNDTKTEIVVEK----------K 44 Query: 63 TVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASSKD 122 + D + TF+ LP+KDCRYA+YD + E + ++FI W+P+ AP+KSKM+Y+SSKD Sbjct: 45 STDKDFDTFLGDLPEKDCRYAIYDFEFNLGEGVRNKIIFISWSPDVAPIKSKMVYSSSKD 104 Query: 123 AIKKKLTGIKHELQANCYEEVKDRCTL 149 +++ TGI ++QA + EV L Sbjct: 105 TLRRAFTGIGTDIQATDFSEVAYETVL 131 >1QPV-A nrPDB Length = 143 Score = 146 bits (369), Expect = 4e-36, Method: Composition-based stats. Identities = 55/149 (36%), Positives = 85/149 (57%), Gaps = 21/149 (14%) Query: 3 SGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQ 62 SGVAV+D + FND+K+ K+ K +LF L++ K I+++E Sbjct: 4 SGVAVADESLTAFNDLKL---------GKKYKFILFGLNDAKTEIVVKE----------T 44 Query: 63 TVDDPYTTFVKMLPDKDCRYALYDATYETK--ESKKEDLVFIFWAPENAPLKSKMIYASS 120 + D Y F++ LP+ DC YA+YD YE E K+ +VF W+P+ AP++SKM+YASS Sbjct: 45 STDPSYDAFLEKLPENDCLYAIYDFEYEINGNEGKRSKIVFFTWSPDTAPVRSKMVYASS 104 Query: 121 KDAIKKKLTGIKHELQANCYEEVKDRCTL 149 KDA+++ L G+ ++Q + EV L Sbjct: 105 KDALRRALNGVSTDVQGTDFSEVSYDSVL 133 >1CNU-A nrPDB Length = 137 Score = 146 bits (367), Expect = 6e-36, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 84/146 (57%), Gaps = 18/146 (12%) Query: 3 SGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQ 62 SG+AVSD ++ FN++K+ + + V F ++ +++E VG Sbjct: 1 SGIAVSDDCVQKFNELKL---------GHQHRYVTFKMNASNTEVVVEH-----VGGPNA 46 Query: 63 TVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASSKD 122 T +D F LP++DCRYA++D ++ ++ + FI WAP++AP+KSKM+Y S+KD Sbjct: 47 TYED----FKSQLPERDCRYAIFDYEFQVDGGQRNKITFILWAPDSAPIKSKMMYTSTKD 102 Query: 123 AIKKKLTGIKHELQANCYEEVKDRCT 148 +IKKKL GI+ E+QA E+ + Sbjct: 103 SIKKKLVGIQVEVQATDAAEISEDAV 128 >5IVU-A nrPDB Length = 141 Score = 137 bits (345), Expect = 2e-33, Method: Composition-based stats. Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 21/149 (14%) Query: 3 SGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQ 62 SGV ++D ++ + +K+ K+ K ++F L+++ I +E+ + + Sbjct: 5 SGVTLNDACVETYQQLKL---------GKKLKYIIFHLNKENTEIAVEKSSDSV------ 49 Query: 63 TVDDPYTTFVKMLPDKDCRYALYDATYETKES--KKEDLVFIFWAPENAPLKSKMIYASS 120 Y F+ LP+ +CR+A+YD YE +E K+ L F+ WAP++A +K KM YASS Sbjct: 50 ----DYDNFLADLPEDECRWAVYDLEYEKEEGAGKRNKLTFVSWAPDSAKMKQKMAYASS 105 Query: 121 KDAIKKKLTGIKHELQANCYEEVKDRCTL 149 KD +++ LTGI E+Q + EV L Sbjct: 106 KDILRRALTGIAVEIQGTDFSEVAHENVL 134 >1F7S-A nrPDB Length = 139 Score = 136 bits (341), Expect = 5e-33, Method: Composition-based stats. Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 19/143 (13%) Query: 2 ASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVG 61 ASG+AV D F ++K +++ + +++ + E +K +++E+ VG Sbjct: 5 ASGMAVHDDCKLRFLELKAKRT---------HRFIVYKIEEKQKQVVVEK--------VG 47 Query: 62 QTVDDPYTTFVKMLPDKDCRYALYDATYETKES-KKEDLVFIFWAPENAPLKSKMIYASS 120 Q + Y F LP +CRYA+YD + T E+ +K + FI W P+ A ++SKMIYASS Sbjct: 48 QPI-QTYEEFAACLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASS 106 Query: 121 KDAIKKKLTGIKHELQANCYEEV 143 KD K++L GI+ ELQA E+ Sbjct: 107 KDRFKRELDGIQVELQATDPTEM 129 >2XFA-A nrPDB Length = 148 Score = 123 bits (309), Expect = 3e-29, Method: Composition-based stats. Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 18/142 (12%) Query: 1 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNII--LEEGKEILVG 58 M SGV VSD I FN +KV K K +++ + +K ++ LE E+ Sbjct: 6 MVSGVNVSDECIYEFNRLKV---------KHLNKYIIYKIENLEKIVVDVLEHDMELT-- 54 Query: 59 DVGQTVDDPYTTFVKMLPDKDCRYALYDATYETKESK-KEDLVFIFWAPENAPLKSKMIY 117 ++D+ L + +CRY + D T E ++ + FIFW+P + K KM+Y Sbjct: 55 ----SLDNIIMRIKNNLKNTECRYIIADMPIPTPEGVLRDRIYFIFWSPGLSKPKEKMLY 110 Query: 118 ASSKDAIKKKLTGIKHELQANC 139 A+SK+++ +K+ GI L+ C Sbjct: 111 AASKESLVRKINGIFKSLEITC 132 >2LJ8-A nrPDB Length = 144 Score = 121 bits (303), Expect = 1e-28, Method: Composition-based stats. Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 26/149 (17%) Query: 3 SGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQ 62 SGV+V+D + ND++ +KS + V+ + D+K+I ++ +G+ G Sbjct: 12 SGVSVADECVTALNDLRHKKS----------RYVIMHIV-DQKSIAVK-----TIGERGA 55 Query: 63 TVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASSKD 122 D K +P YA +D Y T + ++ L+ I W P++ ++KM+Y+SS+D Sbjct: 56 NFDQFIEAIDKNVP----CYAAFDFEYTTNDGPRDKLILISWNPDSGAPRTKMLYSSSRD 111 Query: 123 AIKKKLTGIKHELQAN-----CYEEVKDR 146 A+ G + +QAN +EE+ + Sbjct: 112 ALVPLTQGFQG-IQANDASGLDFEEISRK 139 >2MV2-A nrPDB Length = 148 Score = 121 bits (303), Expect = 1e-28, Method: Composition-based stats. Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 22/154 (14%) Query: 1 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDV 60 MASGV VSD + ++K K+ + V+F + D+K I +E V D Sbjct: 1 MASGVTVSDVCKTTYEEIK---------KDKKHRYVIFYI-RDEKQIDVE-----TVADR 45 Query: 61 GQTVDDPYTTFVKMLPDKDCRYALYDATY------ETKESKKEDLVFIFWAPENAPLKSK 114 D K P +CRY L+D Y ++ SKK+ L + W P+ A +K K Sbjct: 46 NAEYDQFLEDIQKCGPG-ECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKK 104 Query: 115 MIYASSKDAIKKKLTGIKHELQANCYEEVKDRCT 148 M+Y+SS DA+KK L G++ +QA E Sbjct: 105 MLYSSSFDALKKSLVGVQKYIQATDLSEASREAV 138 >2MP4-A nrPDB Length = 165 Score = 118 bits (295), Expect = 1e-27, Method: Composition-based stats. Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 25/169 (14%) Query: 1 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDV 60 M+SGV V V F + E +K + ++F + E+ K I+ + +G Sbjct: 1 MSSGVMVDPDVQTSFQKL--------SEGRKEYRYIIFKIDEN-KVIVEAAVTQDQLGIT 51 Query: 61 GQTVDDPY-TTFVKMLPD--------KDCRYALYDATYETKE-----SKKEDLVFIFWAP 106 G DD F K + D DCRYA++D + SK + ++F+ P Sbjct: 52 GDDYDDSSKAAFDKFVEDVKSRTDNLTDCRYAVFDFKFTCSRVGAGTSKMDKIIFLQICP 111 Query: 107 ENAPLKSKMIYASSKDAIKKKL-TGIKHELQANCYEEVKDRCTLAEKLG 154 + A +K KM+YASS AIK L TG + Q + E+ + L KLG Sbjct: 112 DGASIKKKMVYASSAAAIKTSLGTGKILQFQVSDESEMSHK-ELLNKLG 159 >2L72-A nrPDB Length = 139 Score = 114 bits (284), Expect = 3e-26, Method: Composition-based stats. Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 30/130 (23%) Query: 1 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDV 60 MASG+ V + + FN++K+RK+ K ++F + E+ K ++ ++GK Sbjct: 22 MASGMGVDENCVARFNELKIRKTV---------KWIVFKI-ENTKIVVEKDGKG------ 65 Query: 61 GQTVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASS 120 F LP DCR+ +YD + F+ W P+NAP+K +M YASS Sbjct: 66 ------NADEFRGALPANDCRFGVYDC--------GNKIQFVLWCPDNAPVKPRMTYASS 111 Query: 121 KDAIKKKLTG 130 KDA+ KKL G Sbjct: 112 KDALLKKLDG 121 >2MOT-A nrPDB Length = 118 Score = 112 bits (281), Expect = 5e-26, Method: Composition-based stats. Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 30/130 (23%) Query: 1 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDV 60 MASG+ V + + FN++K+RK+ K ++F + E+ K ++ ++GK Sbjct: 1 MASGMGVDENCVARFNELKIRKTV---------KWIVFKI-ENTKIVVEKDGKG------ 44 Query: 61 GQTVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASS 120 F LP DCR+ +YD + F+ W P+NAP+K +M YASS Sbjct: 45 ------NADEFRGALPANDCRFGVYDC--------GNKIQFVLWCPDNAPVKPRMTYASS 90 Query: 121 KDAIKKKLTG 130 KDA+ KKL G Sbjct: 91 KDALLKKLDG 100 >2KVK-A nrPDB Length = 144 Score = 109 bits (273), Expect = 4e-25, Method: Composition-based stats. Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 21/162 (12%) Query: 2 ASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVG 61 SGV + + V +D++++KS + V+ C+ D GK+I V +VG Sbjct: 3 ISGVTLEESVRGAIDDLRMKKS----------RYVMMCIGAD--------GKKIEVTEVG 44 Query: 62 QTVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASSK 121 + + K +K C Y +D Y SK+E L+ I W P+ A + KM+Y++S+ Sbjct: 45 ERSVNYTDLKEKFSTEKPC-YVAFDFEYNDAGSKREKLILIQWIPDTARPREKMMYSASR 103 Query: 122 DAIKKKLTGIKHELQANCYEEVKDRCTLAE-KLGGSAVISLE 162 DA+ G +QAN + + + +L S +LE Sbjct: 104 DALSSVSEGY-LPIQANDESGLDAEEIIRKVRLHRSVAAALE 144 >2LXX-A nrPDB Length = 152 Score = 103 bits (256), Expect = 4e-23, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 22/148 (14%) Query: 1 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDV 60 MASGV V ++ + K + ++F + ++ I++E+ VG+ Sbjct: 1 MASGVKVDPSCKNAYDLL---------HNKHQHSYIIFKIDKNDTAIVVEK-----VGEK 46 Query: 61 GQTVDDPYTTFVKMLPD-KDCRYALYDATYETKESKKE------DLVFIFWAPENAPLKS 113 + K++ D K+CRYA D + E ++F+ + P+NAP++ Sbjct: 47 NAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRR 106 Query: 114 KMIYASSKDAIKKKLTGIKHELQANCYE 141 +M+YASS A+K L G++ Q E Sbjct: 107 RMLYASSVRALKASL-GLESLFQVQASE 133 >3Q2B-A nrPDB Length = 124 Score = 101 bits (252), Expect = 1e-22, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 26/133 (19%) Query: 1 MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDV 60 M SG+ V+D + FN+MK+RK+ ++F + ++ + II +G + ++ Sbjct: 3 MISGIRVNDNCVTEFNNMKIRKTCGW---------IIFVI-QNCEIIIHSKGASTTLTEL 52 Query: 61 GQTVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASS 120 Q++D + C Y ++DA + F +A E++ + +M YASS Sbjct: 53 VQSIDKN--------NEIQCAYVVFDAV--------SKIHFFMYARESSNSRDRMTYASS 96 Query: 121 KDAIKKKLTGIKH 133 K AI KK+ G+ Sbjct: 97 KQAILKKIEGVNV 109 >1M4J-A nrPDB Length = 142 Score = 96.0 bits (237), Expect = 7e-21, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 56/100 (56%), Gaps = 8/100 (8%) Query: 51 EGKEILVGDVGQTVD---DPYTTFV-KMLPDKDCRYALYDATYETKESKKEDLVFIFWAP 106 E ++++VG D Y +FV +L DK Y L+ +++ ++ + +FI W+P Sbjct: 33 ENEQLVVGSCSPPSDSWEQDYDSFVLPLLEDKQPCYVLF--RLDSQNAQGYEWIFIAWSP 90 Query: 107 ENAPLKSKMIYASSKDAIKKKLTG--IKHELQANCYEEVK 144 +++ ++ KM+YA+++ +KK+ G IK E+ E+V Sbjct: 91 DHSHVRQKMLYAATRATLKKEFGGGHIKDEVFGTVKEDVS 130 >2VAC-A nrPDB Length = 134 Score = 93.3 bits (230), Expect = 5e-20, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 60/109 (55%), Gaps = 12/109 (11%) Query: 48 ILEEGKEILVGD----VGQTVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIF 103 ++ E +++++G VG+ D + +L + Y LY +++ ++ + +F+ Sbjct: 27 VVIEDEQLVLGASQEPVGRWDQDYDRAVLPLLDAQQPCYLLY--RLDSQNAQGFEWLFLA 84 Query: 104 WAPENAPLKSKMIYASSKDAIKKKLTG--IKHELQANCYEEVKDRCTLA 150 W+P+N+P++ KM+YA+++ +KK+ G IK EL VKD + A Sbjct: 85 WSPDNSPVRLKMLYAATRATVKKEFGGGHIKDELFGT----VKDDLSFA 129 >1V6F-A nrPDB Length = 151 Score = 54.8 bits (130), Expect = 2e-08, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 65/149 (43%), Gaps = 20/149 (13%) Query: 7 VSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDD 66 V++ +++ + RK + A++ + +D++ ++L+E E + Sbjct: 16 VAEDLVEKLRKFRFRKET-------HNAAIIMKIDKDERLVVLDEELEGV---------- 58 Query: 67 PYTTFVKMLPDKDCRYALYDATYETKESK-KEDLVFIFWAPENAPLKSKMIYASSKDAIK 125 LP++ R+ +Y Y+ + + L FIF +P + +M+YA SK+ + Sbjct: 59 SPDELKDELPERQPRFIVYSYKYQHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLV 118 Query: 126 KKLTGIKHELQANCYEEVKDRCTLAEKLG 154 + + + E++ + L EKLG Sbjct: 119 QTAE-LTKVFEIRNTEDLTEEW-LREKLG 145 >3L50-A nrPDB Length = 136 Score = 49.8 bits (117), Expect = 5e-07, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 18/121 (14%) Query: 7 VSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDD 66 V + + + RK + A++ + +D++ ++LEE + + Sbjct: 6 VDPELTEKLRKFRFRKET-------DNAAIIMKVDKDRQMVVLEEEFQNI---------- 48 Query: 67 PYTTFVKMLPDKDCRYALYDATYETKESK-KEDLVFIFWAPENAPLKSKMIYASSKDAIK 125 LP++ R+ +Y Y + + L FIF +P + +M+YA SK+ + Sbjct: 49 SPEELKMELPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLV 108 Query: 126 K 126 + Sbjct: 109 Q 109 >4JD2-H nrPDB Length = 142 Score = 49.4 bits (116), Expect = 7e-07, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 50/121 (41%), Gaps = 18/121 (14%) Query: 7 VSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDD 66 V + + + RK + A++ + +D++ ++LE+ + + Sbjct: 10 VDPELKETLRKFRFRKETN-------NAAIIMKVDKDRQMVVLEDELQNI---------- 52 Query: 67 PYTTFVKMLPDKDCRYALYDATYETKESK-KEDLVFIFWAPENAPLKSKMIYASSKDAIK 125 LP++ R+ +Y Y + + L FIF +P + +M+YA SK+ + Sbjct: 53 SPEELKLELPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLV 112 Query: 126 K 126 + Sbjct: 113 Q 113 >5YNR-A nrPDB Length = 140 Score = 43.6 bits (101), Expect = 4e-05, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 3/127 (2%) Query: 23 SSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDD-PYTTFVKMLPDKDCR 81 S P+ VK+ K F S +IL+ +E Q ++D F + LP + R Sbjct: 10 CSIPDGVKEDLKKFRFSKSTTMNALILKIDRESHELQSEQLLNDCSIEEFKEELPSQQPR 69 Query: 82 YALYD-ATYETKESKKEDLVFIFWAPENAPLKSKMIYASSKDAIKKKLTGIKHELQANCY 140 + L + E ++ I++ P + + +M+YA S++ I + + + Sbjct: 70 FILLSWCKKHSDERISYPMLLIYYCPNGSSPELQMLYAGSRNFIVNECH-VSKNTEIRDI 128 Query: 141 EEVKDRC 147 +E+ D Sbjct: 129 DEIDDEL 135 >1HQZ-1 nrPDB Length = 141 Score = 43.3 bits (100), Expect = 5e-05, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 58/139 (41%), Gaps = 6/139 (4%) Query: 20 VRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYTTFVKMLPDKD 79 + ++ E+ ++ D +I+ + ++ + F+++ + Sbjct: 6 IDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEP--ESTGSSFHDFLQLFDETK 63 Query: 80 CRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASSKDAIKKK-LTGIKHELQAN 138 +Y L A S E ++ I W P++APLK++ +A++ A+ G ++ A Sbjct: 64 VQYGL--ARVSPPGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTAR 121 Query: 139 CYEEVKDRCTLAEKLGGSA 157 +++ D L K+ +A Sbjct: 122 DEDDL-DENELLMKISNAA 139 >2W0I-A nrPDB Length = 135 Score = 35.9 bits (81), Expect = 0.009, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 42/126 (33%), Gaps = 22/126 (17%) Query: 5 VAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTV 64 + + + +K +K + L +++ I L + V + Sbjct: 2 MPLQPEAQRALQQLK----------QKMVNYIQMKLDLERETIELVHTEPTDVAQLPSR- 50 Query: 65 DDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPE-NAPLKSKMIYASSKDA 123 +P RY + + + E +VFI+ P +K +M+Y+S K Sbjct: 51 ----------VPRDAARYHFFLYKHTHEGDPLESVVFIYSMPGYKCSIKERMLYSSCKSR 100 Query: 124 IKKKLT 129 + + Sbjct: 101 LLDSVE 106 >4LIZ-A nrPDB Length = 142 Score = 34.4 bits (77), Expect = 0.022, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 1/112 (0%) Query: 41 SEDKKNIILEEGKEILVGDVGQTVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLV 100 +E+ + ++ + V L + ++A Y +ESK+ V Sbjct: 21 NEEVEFVVFGVQTQPNKLVVDAKGKGGLEEVKAALKEDALQFAYYRTISGDEESKRVKFV 80 Query: 101 FIFWAPEN-APLKSKMIYASSKDAIKKKLTGIKHELQANCYEEVKDRCTLAE 151 FI WA E K + + + K +K + EL A +++ + A+ Sbjct: 81 FISWAGEGIKKPKLRAVMSILKGDVKNVINNFHIELHATSLDDLVEDEIAAK 132 >3DAW-B nrPDB Length = 164 Score = 34.4 bits (77), Expect = 0.022, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 12/97 (12%) Query: 30 KKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYTTFVKMLPDKDCRYALYDATY 89 KK+ V + + IIL + + D+ K +P RY + + Sbjct: 37 KKQLNYVQLEIDIKNETIILANTENTELRDLP-----------KRIPKDSARYHFFLYKH 85 Query: 90 ETKESKKEDLVFIFWAPE-NAPLKSKMIYASSKDAIK 125 + E +VFI+ P ++ +M+Y+S K + Sbjct: 86 SHEGDYLESVVFIYSMPGYTCSIRERMLYSSCKSPLL 122 >2D8B-A nrPDB Length = 166 Score = 34.4 bits (77), Expect = 0.022, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 12/97 (12%) Query: 30 KKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYTTFVKMLPDKDCRYALYDATY 89 KK+ V + + IIL + + D+ K +P RY + + Sbjct: 42 KKQLNYVQLEIDIKNETIILANTENTELRDLP-----------KRIPKDSARYHFFLYKH 90 Query: 90 ETKESKKEDLVFIFWAPE-NAPLKSKMIYASSKDAIK 125 + E +VFI+ P ++ +M+Y+S K + Sbjct: 91 SHEGDYLESVVFIYSMPGYTCSIRERMLYSSCKSPLL 127 >2HD7-A nrPDB Length = 142 Score = 34.4 bits (77), Expect = 0.025, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 12/97 (12%) Query: 30 KKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYTTFVKMLPDKDCRYALYDATY 89 KK+ V + + IIL + + D+ K +P RY + + Sbjct: 21 KKQLNYVQLEIDIKNETIILANTENTELRDLP-----------KRIPKDSARYHFFLYKH 69 Query: 90 ETKESKKEDLVFIFWAPE-NAPLKSKMIYASSKDAIK 125 + E +VFI+ P ++ +M+Y+S K + Sbjct: 70 SHEGDYLESVVFIYSMPGYTCSIRERMLYSSCKSPLL 106 >5ECU-A nrPDB Length = 555 Score = 27.5 bits (59), Expect = 3.2, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Query: 79 DCRYALYDATYETKESKKEDL-VFIFWAPEN 108 DC+Y +D + K++ K +L +F+ +AP + Sbjct: 435 DCKYLCFDFYLKPKQATKGELAIFLAFAPPS 465 >1X67-A nrPDB Length = 146 Score = 27.1 bits (58), Expect = 4.2, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 27/87 (31%), Gaps = 2/87 (2%) Query: 69 TTFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPENAPLKSKMIYASSKDAIKKKL 128 V+ L YA + S V I W E K AS + L Sbjct: 58 EEMVEELNSGKVMYAF--CRVKDPNSGLPKFVLINWTGEGVNDVRKGACASHVSTMASFL 115 Query: 129 TGIKHELQANCYEEVKDRCTLAEKLGG 155 G + A E+V+ C + + G Sbjct: 116 KGAHVTINARAEEDVEPECIMEKVASG 142 >3CR8-A nrPDB Length = 552 Score = 25.9 bits (55), Expect = 8.5, Method: Composition-based stats. Identities = 7/36 (19%), Positives = 15/36 (41%) Query: 113 SKMIYASSKDAIKKKLTGIKHELQANCYEEVKDRCT 148 K +YA ++ + + TG+ + E+ T Sbjct: 487 RKGLYAKARAGLIPEFTGVSDPYEVPETPELAIDTT 522 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.122 0.321 Lambda K H 0.267 0.0376 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,557,633 Number of Sequences: 36641 Number of extensions: 192722 Number of successful extensions: 571 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 22 Number of HSP's that attempted gapping in prelim test: 462 Number of HSP's gapped (non-prelim): 82 length of query: 166 length of database: 10,336,785 effective HSP length: 90 effective length of query: 76 effective length of database: 7,039,095 effective search space: 534971220 effective search space used: 534971220 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 55 (25.9 bits)