BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P17405 (631 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5I81-A nrPDB 1197 0.0 5FI9-A nrPDB 934 0.0 5HQN-A nrPDB 820 0.0 5FCB-A nrPDB 181 6e-46 5EBE-A nrPDB 176 2e-44 5KAR-A nrPDB 173 2e-43 3C9F-A nrPDB 31 1.6 2DOB-A nrPDB 30 2.6 2ODO-A nrPDB 29 5.7 2NXF-A nrPDB 29 6.6 3B9T-A nrPDB 29 6.8 >5I81-A nrPDB Length = 583 Score = 1197 bits (3096), Expect = 0.0, Method: Compositional matrix adjust. Identities = 583/583 (100%), Positives = 583/583 (100%) Query: 49 LSDSRVLWAPAEAHPLSPQGHPARLHRIVPRLRDVFGWGNLTCPICKGLFTAINLGLKKE 108 LSDSRVLWAPAEAHPLSPQGHPARLHRIVPRLRDVFGWGNLTCPICKGLFTAINLGLKKE Sbjct: 1 LSDSRVLWAPAEAHPLSPQGHPARLHRIVPRLRDVFGWGNLTCPICKGLFTAINLGLKKE 60 Query: 109 PNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCG 168 PNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCG Sbjct: 61 PNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCG 120 Query: 169 HWDIFSSWNISLPTVPKPPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLC 228 HWDIFSSWNISLPTVPKPPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLC Sbjct: 121 HWDIFSSWNISLPTVPKPPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLC 180 Query: 229 CRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHDVWH 288 CRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHDVWH Sbjct: 181 CRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHDVWH 240 Query: 289 QTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMA 348 QTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMA Sbjct: 241 QTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMA 300 Query: 349 KAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWL 408 KAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWL Sbjct: 301 KAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWL 360 Query: 409 VGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVF 468 VGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVF Sbjct: 361 VGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVF 420 Query: 469 YDEETLSRPLAVAFLAPSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANI 528 YDEETLSRPLAVAFLAPSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANI Sbjct: 421 YDEETLSRPLAVAFLAPSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANI 480 Query: 529 PGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCGT 588 PGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCGT Sbjct: 481 PGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCGT 540 Query: 589 PCRLATLCAQLSARADSPALCRHLMPDGSLPEAQSLWPRPLFC 631 PCRLATLCAQLSARADSPALCRHLMPDGSLPEAQSLWPRPLFC Sbjct: 541 PCRLATLCAQLSARADSPALCRHLMPDGSLPEAQSLWPRPLFC 583 >5FI9-A nrPDB Length = 538 Score = 934 bits (2413), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/528 (88%), Positives = 494/528 (93%) Query: 88 NLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEV 147 NLTCP CK LFTA+N GLKKEPNVARVGSVAIK+C +L IAP VCQS VHLFEDD+VEV Sbjct: 11 NLTCPACKVLFTALNHGLKKEPNVARVGSVAIKICKMLNIAPLDVCQSAVHLFEDDVVEV 70 Query: 148 WRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTVPKPPPKPPSPPAPGAPVSRILFLT 207 W RSVLSPSEACGLLLGS+CGHWDIFS+WNISLP+VPKPPPKPPSPPAPGAPVSR+LFLT Sbjct: 71 WTRSVLSPSEACGLLLGSSCGHWDIFSTWNISLPSVPKPPPKPPSPPAPGAPVSRVLFLT 130 Query: 208 DLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLG 267 DLHWDH+YLEGTDP CADPLCCRRGSG PP S+ GAG+WGEYSKCDLPLRTLESLL GLG Sbjct: 131 DLHWDHEYLEGTDPYCADPLCCRRGSGWPPNSQKGAGFWGEYSKCDLPLRTLESLLKGLG 190 Query: 268 PAGPFDMVYWTGDIPAHDVWHQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVN 327 PAGPF+MVYWTGDIPAHDVW Q+RQDQLRALTT+T LVRKFLGPVPVYPAVGNHESTPVN Sbjct: 191 PAGPFEMVYWTGDIPAHDVWQQSRQDQLRALTTITDLVRKFLGPVPVYPAVGNHESTPVN 250 Query: 328 SFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMNFC 387 FPPPFI+GN SS+WLYEAMAKAWEPWLPA+AL TLRIGGFYAL+P PGLRLISLNMNFC Sbjct: 251 GFPPPFIKGNQSSQWLYEAMAKAWEPWLPADALHTLRIGGFYALTPRPGLRLISLNMNFC 310 Query: 388 SRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVAR 447 SRENFWLLINSTDPAGQLQWLV ELQAAE+RGDKVHIIGHIPPGHCLKSWSWNYY+I+AR Sbjct: 311 SRENFWLLINSTDPAGQLQWLVEELQAAENRGDKVHIIGHIPPGHCLKSWSWNYYKIIAR 370 Query: 448 YENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAPSATTYIGLNPGYRVYQIDGNYS 507 YENTLA QFFGHTHVDEFE+FYDEETLSRPLAVAFLAPSATT+I LNPGYRVYQIDGNY Sbjct: 371 YENTLAGQFFGHTHVDEFEIFYDEETLSRPLAVAFLAPSATTFINLNPGYRVYQIDGNYP 430 Query: 508 GSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQ 567 GSSHVVLDHETYILNLTQAN G P W+ LYRARETYGLP+ +P +WHNLVYRMR D Q Sbjct: 431 GSSHVVLDHETYILNLTQANAAGGTPSWKRLYRARETYGLPDAMPASWHNLVYRMRDDEQ 490 Query: 568 LFQTFWFLYHKGHPPSEPCGTPCRLATLCAQLSARADSPALCRHLMPD 615 LFQTFWFLYHKGHPPSEPCGTPCRLATLCAQLSARADSPALCRHLMP+ Sbjct: 491 LFQTFWFLYHKGHPPSEPCGTPCRLATLCAQLSARADSPALCRHLMPN 538 >5HQN-A nrPDB Length = 473 Score = 820 bits (2117), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/463 (88%), Positives = 434/463 (93%) Query: 169 HWDIFSSWNISLPTVPKPPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLC 228 HWDIFS+WNISLP+VPKPPPKPPSPPAPGAPVSR+LFLTDLHWDH+YLEGTDP CADPLC Sbjct: 11 HWDIFSTWNISLPSVPKPPPKPPSPPAPGAPVSRVLFLTDLHWDHEYLEGTDPYCADPLC 70 Query: 229 CRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHDVWH 288 CRRGSG PP S+ GAG+WGEYSKCDLPLRTLESLL GLGPAGPF+MVYWTGDIPAHDVW Sbjct: 71 CRRGSGWPPNSQKGAGFWGEYSKCDLPLRTLESLLKGLGPAGPFEMVYWTGDIPAHDVWQ 130 Query: 289 QTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMA 348 Q+RQDQLRALTT+T LVRKFLGPVPVYPAVGNHESTPVN FPPPFI+GN SS+WLYEAMA Sbjct: 131 QSRQDQLRALTTITDLVRKFLGPVPVYPAVGNHESTPVNGFPPPFIKGNQSSQWLYEAMA 190 Query: 349 KAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWL 408 KAWEPWLPA+AL TLRIGGFYAL+P PGLRLISLNMNFCSRENFWLLINSTDPAGQLQWL Sbjct: 191 KAWEPWLPADALHTLRIGGFYALTPRPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWL 250 Query: 409 VGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVF 468 V ELQAAE+RGDKVHIIGHIPPGHCLKSWSWNYY+I+ARYENTLA QFFGHTHVDEFE+F Sbjct: 251 VEELQAAENRGDKVHIIGHIPPGHCLKSWSWNYYKIIARYENTLAGQFFGHTHVDEFEIF 310 Query: 469 YDEETLSRPLAVAFLAPSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANI 528 YDEETLSRPLAVAFLAPSATT+I LNPGYRVYQIDGNY GSSHVVLDHETYILNLTQAN Sbjct: 311 YDEETLSRPLAVAFLAPSATTFINLNPGYRVYQIDGNYPGSSHVVLDHETYILNLTQANA 370 Query: 529 PGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCGT 588 G P W+ LYRARETYGLP+ +P +WHNLVYRMR D QLFQTFWFLYHKGHPPSEPCGT Sbjct: 371 AGGTPSWKRLYRARETYGLPDAMPASWHNLVYRMRDDEQLFQTFWFLYHKGHPPSEPCGT 430 Query: 589 PCRLATLCAQLSARADSPALCRHLMPDGSLPEAQSLWPRPLFC 631 PCRLATLCAQLSARADSPALCRHLMP+GSLP+A LW RPL C Sbjct: 431 PCRLATLCAQLSARADSPALCRHLMPNGSLPDANRLWSRPLLC 473 >5FCB-A nrPDB Length = 433 Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 140/445 (31%), Positives = 213/445 (47%), Gaps = 46/445 (10%) Query: 191 PSPPAPGAP-VSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEY 249 P PA AP V + +TDLH D Y TD D +G+ AS PG +G+ Sbjct: 12 PLAPADRAPAVGQFWHVTDLHLDPTY-HITD-DRTKVCASSKGAN---ASNPGP--FGD- 63 Query: 250 SKCDLPLRTLESLLSGLGPAG-PFDMVYWTGDIPAHD-VWHQTRQDQLRALTTVTALVRK 307 CD P + + S + +G + WTGD P H V + ++ +T +T V+ Sbjct: 64 VLCDSPYQLILSAFDFIKNSGQEASFMIWTGDSPPHVPVPELSTGTVIKVITNMTMTVQN 123 Query: 308 FLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGG 367 + V+PA+GNH+ P + P + +Y A+A W+PWL EA+ TL+ GG Sbjct: 124 LFPNLQVFPALGNHDYWPQDQLPI-------VTSKVYSAVADLWKPWLGEEAISTLKKGG 176 Query: 368 FYA--LSPYPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHII 425 FY+ ++ PGLR+ISLN N N + +N TDPA Q +WL L ++ +KV+II Sbjct: 177 FYSQKVASNPGLRIISLNTNLYYGPNI-MTLNKTDPANQFEWLENTLNSSLWNKEKVYII 235 Query: 426 GHIPPGH---------CLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSR 476 H+P G+ + ++ I RY + +A QF+GHTH D V D+ Sbjct: 236 AHVPVGYLPYATDTPAIRQYYNEKLLDIFRRYSSVIAGQFYGHTHRDSLMVLSDKN--GN 293 Query: 477 PLAVAFLAPSATTYIGL------NPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPG 530 PL F+AP+ T G+ NPG R++Q Y + +LD Y LNLT+AN+ G Sbjct: 294 PLNSVFVAPAVTPVKGVLQKETNNPGVRLFQ----YKPGDYTLLDMVQYYLNLTEANLKG 349 Query: 531 AIPHWQLLYRARETYGLPNTLPTAWHNLVYRM-RGDMQLFQTFWFLYHKGHPPSEPCGTP 589 +W L Y + Y + + P + + LV + D + F ++ Y + S C Sbjct: 350 E-SNWTLEYVLTQAYSVADLQPKSLYALVQQFATKDSKQFLKYYHYYFVSYDSSATCDQH 408 Query: 590 CRLATLCA--QLSARADSPALCRHL 612 C+ +CA L + + L +HL Sbjct: 409 CKTLQVCAIMNLDSMSYDDCLKQHL 433 >5EBE-A nrPDB Length = 418 Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 135/437 (30%), Positives = 208/437 (47%), Gaps = 47/437 (10%) Query: 193 PPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKC 252 PPA G + +TDLH D Y TD D +G+ AS PG +G+ C Sbjct: 2 PPAIG----QFWHVTDLHLDPTY-HITD-DHTKVCASSKGAN---ASNPGP--FGD-VLC 49 Query: 253 DLPLRTLESLLSGLGPAG-PFDMVYWTGDIPAHDVWHQTRQDQ-LRALTTVTALVRKFLG 310 D P + + S + +G + WTGD P H + D + +T +T ++ Sbjct: 50 DSPYQLILSAFDFIKNSGQEASFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFP 109 Query: 311 PVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYA 370 + V+PA+GNH+ P + P + +Y A+A W+PWL EA+ TLR GGFY+ Sbjct: 110 NLQVFPALGNHDYWPQDQLPV-------VTSKVYNAVANLWKPWLDEEAISTLRKGGFYS 162 Query: 371 --LSPYPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHI 428 ++ P LR+ISLN N N + +N TDPA Q +WL L ++ +KV+II H+ Sbjct: 163 QKVTTNPNLRIISLNTNLYYGPNI-MTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHV 221 Query: 429 PPGHCLKSWSWN----YYR-----IVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLA 479 P G+ S + YY I +Y + +A QF+GHTH D V D++ P+ Sbjct: 222 PVGYLPSSQNITAMREYYNEKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKK--GSPVN 279 Query: 480 VAFLAPSATTYIGL------NPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIP 533 F+AP+ T + NPG R++Q Y + +LD Y LNLT+AN+ G Sbjct: 280 SLFVAPAVTPVKSVLEKQTNNPGIRLFQ----YDPRDYKLLDMLQYYLNLTEANLKGE-S 334 Query: 534 HWQLLYRARETYGLPNTLPTAWHNLVYRMRG-DMQLFQTFWFLYHKGHPPSEPCGTPCRL 592 W+L Y +TY + + P + + L + D + F ++ + + S C C+ Sbjct: 335 IWKLEYILTQTYDIEDLQPESLYGLAKQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKA 394 Query: 593 ATLCAQLSARADSPALC 609 +CA ++ S A C Sbjct: 395 FQICAIMNLDNISYADC 411 >5KAR-A nrPDB Length = 427 Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 129/435 (29%), Positives = 195/435 (44%), Gaps = 47/435 (10%) Query: 200 VSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTL 259 + R ++DLH D +Y DP P +G P AG WG+Y CD P + Sbjct: 12 LGRFWHISDLHLDPNYTVSKDPLQVCP-----SAGSQPVL--NAGPWGDY-LCDSPWALI 63 Query: 260 ESLLSGLGPAGPF-DMVYWTGDIPAHDVWHQTRQDQLRALTT-VTALVRKFLGPVPVYPA 317 S L + P D + WTGD H + + A+ +T L+++ VY A Sbjct: 64 NSSLYAMKEIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDTKVYAA 123 Query: 318 VGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALS---PY 374 +GNH+ P N FP S +Y +A+ W PWL E+ + G FY+ P Sbjct: 124 LGNHDFHPKNQFPA-------QSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPS 176 Query: 375 PGLRLISLNMNFCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCL 434 R++ LN N N DP Q +WL L A G+ V++IGH+PPG Sbjct: 177 RAGRVVVLNTNLYYSNN-EQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFE 235 Query: 435 K---------SWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAP 485 K S++ Y +++ ++ +A QFFGH H D F +FYD P+ V FL P Sbjct: 236 KTQNKAWFRESFNEEYLKVIQKHHRVIAGQFFGHHHTDSFRMFYD--NTGAPINVMFLTP 293 Query: 486 SA----TTYIGL-----NPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQ 536 TT G+ NPG R+++ Y ++ + D TY LNL QAN+ P W+ Sbjct: 294 GVTPWKTTLPGVVDGANNPGIRIFE----YDRATLNLKDLVTYFLNLRQANVQ-ETPRWE 348 Query: 537 LLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCGTPCRLATLC 596 YR E Y +P+ ++ H + R+ + + Q + ++Y+ C CR+ +C Sbjct: 349 QEYRLTEAYQVPDASVSSMHTALTRIASEPHILQRY-YVYNSVSYNHLTCEDSCRIEHVC 407 Query: 597 AQLSARADSPALCRH 611 A ++ A C H Sbjct: 408 AIQHVAFNTYATCLH 422 >3C9F-A nrPDB Length = 557 Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust. Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 8/103 (7%) Query: 369 YALSPYPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWLVGE---LQAAEDRGDKVHII 425 Y +P G+R+++ F + NS + + E +A + D + I+ Sbjct: 150 YFTTPIRGIRVMAFGFLFDFKR-----FNSGTRVTPMAETIHEPWFQEALKHEVDLIIIV 204 Query: 426 GHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVF 468 GH P H + + + + +T+ F GH+H+ +F VF Sbjct: 205 GHTPISHNWGEFYQVHQYLRQFFPDTIIQYFGGHSHIRDFTVF 247 >2DOB-A nrPDB Length = 83 Score = 30.4 bits (67), Expect = 2.6, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%) Query: 87 GNLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLL-KIAPPAVCQSIVHLFEDDMV 145 G+L C ICK + TA LK + K C+ L K A C+ IV + ++ Sbjct: 2 GSLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKPNMSASCKEIVDSYLPVIL 61 Query: 146 EVWRRSVLSPSEACGLL 162 ++ + + P E C L Sbjct: 62 DIIKGEMSRPGEVCSAL 78 >2ODO-A nrPDB Length = 357 Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust. Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Query: 576 YHKGHPPSEPCGTPCRLATLCAQLSARADSPALCRHL--MPDGSLPEAQSLWPRPLF 630 Y G+P P GTP + + +QL R LC L +P L LW + + Sbjct: 272 YADGYPRQAPTGTPVFVDGVRSQLLGRVSMDMLCIDLTDVPQAGLGSTVELWGKNIL 328 >2NXF-A nrPDB Length = 322 Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust. Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 5/77 (6%) Query: 390 ENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKS---WSWNYYRI-- 444 E ++ N QLQWL L ++ + ++V I H+P C +WN+ + Sbjct: 191 EQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADPICLAWNHEAVLS 250 Query: 445 VARYENTLAAQFFGHTH 461 V R ++ GH H Sbjct: 251 VLRSHQSVLCFIAGHDH 267 >3B9T-A nrPDB Length = 484 Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 4/67 (5%) Query: 271 PFDMVYWTGDIPAHDVWHQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFP 330 PF +V+ D P V H T L + VR G + + P E+ VNS P Sbjct: 253 PFGVVHPIVDYPGVPVDHSTISKNYNVLKNIRVPVRPHFGTMGLAPK----EADLVNSVP 308 Query: 331 PPFIEGN 337 P GN Sbjct: 309 PSHFGGN 315 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5I81-A nrPDB 1018 0.0 5FI9-A nrPDB 889 0.0 5HQN-A nrPDB 754 0.0 5FCB-A nrPDB 544 e-155 5EBE-A nrPDB 541 e-154 5KAR-A nrPDB 525 e-149 Sequences not found previously or not previously below threshold: 2JJ9-A nrPDB 37 0.021 2NXF-A nrPDB 36 0.046 3MKD-A nrPDB 36 0.048 3C9F-A nrPDB 35 0.074 3IF8-A nrPDB 33 0.43 6MN5-A nrPDB 30 2.4 4JE5-A nrPDB 30 3.4 4XV0-A nrPDB 29 5.6 3E7O-A nrPDB 29 6.8 5A4P-A nrPDB 29 8.3 5AOO-B nrPDB 29 9.2 CONVERGED! >5I81-A nrPDB Length = 583 Score = 1018 bits (2631), Expect = 0.0, Method: Composition-based stats. Identities = 583/583 (100%), Positives = 583/583 (100%) Query: 49 LSDSRVLWAPAEAHPLSPQGHPARLHRIVPRLRDVFGWGNLTCPICKGLFTAINLGLKKE 108 LSDSRVLWAPAEAHPLSPQGHPARLHRIVPRLRDVFGWGNLTCPICKGLFTAINLGLKKE Sbjct: 1 LSDSRVLWAPAEAHPLSPQGHPARLHRIVPRLRDVFGWGNLTCPICKGLFTAINLGLKKE 60 Query: 109 PNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCG 168 PNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCG Sbjct: 61 PNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCG 120 Query: 169 HWDIFSSWNISLPTVPKPPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLC 228 HWDIFSSWNISLPTVPKPPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLC Sbjct: 121 HWDIFSSWNISLPTVPKPPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLC 180 Query: 229 CRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHDVWH 288 CRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHDVWH Sbjct: 181 CRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHDVWH 240 Query: 289 QTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMA 348 QTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMA Sbjct: 241 QTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMA 300 Query: 349 KAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWL 408 KAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWL Sbjct: 301 KAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWL 360 Query: 409 VGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVF 468 VGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVF Sbjct: 361 VGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVF 420 Query: 469 YDEETLSRPLAVAFLAPSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANI 528 YDEETLSRPLAVAFLAPSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANI Sbjct: 421 YDEETLSRPLAVAFLAPSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANI 480 Query: 529 PGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCGT 588 PGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCGT Sbjct: 481 PGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCGT 540 Query: 589 PCRLATLCAQLSARADSPALCRHLMPDGSLPEAQSLWPRPLFC 631 PCRLATLCAQLSARADSPALCRHLMPDGSLPEAQSLWPRPLFC Sbjct: 541 PCRLATLCAQLSARADSPALCRHLMPDGSLPEAQSLWPRPLFC 583 >5FI9-A nrPDB Length = 538 Score = 889 bits (2298), Expect = 0.0, Method: Composition-based stats. Identities = 466/528 (88%), Positives = 494/528 (93%) Query: 88 NLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEV 147 NLTCP CK LFTA+N GLKKEPNVARVGSVAIK+C +L IAP VCQS VHLFEDD+VEV Sbjct: 11 NLTCPACKVLFTALNHGLKKEPNVARVGSVAIKICKMLNIAPLDVCQSAVHLFEDDVVEV 70 Query: 148 WRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTVPKPPPKPPSPPAPGAPVSRILFLT 207 W RSVLSPSEACGLLLGS+CGHWDIFS+WNISLP+VPKPPPKPPSPPAPGAPVSR+LFLT Sbjct: 71 WTRSVLSPSEACGLLLGSSCGHWDIFSTWNISLPSVPKPPPKPPSPPAPGAPVSRVLFLT 130 Query: 208 DLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLG 267 DLHWDH+YLEGTDP CADPLCCRRGSG PP S+ GAG+WGEYSKCDLPLRTLESLL GLG Sbjct: 131 DLHWDHEYLEGTDPYCADPLCCRRGSGWPPNSQKGAGFWGEYSKCDLPLRTLESLLKGLG 190 Query: 268 PAGPFDMVYWTGDIPAHDVWHQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVN 327 PAGPF+MVYWTGDIPAHDVW Q+RQDQLRALTT+T LVRKFLGPVPVYPAVGNHESTPVN Sbjct: 191 PAGPFEMVYWTGDIPAHDVWQQSRQDQLRALTTITDLVRKFLGPVPVYPAVGNHESTPVN 250 Query: 328 SFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMNFC 387 FPPPFI+GN SS+WLYEAMAKAWEPWLPA+AL TLRIGGFYAL+P PGLRLISLNMNFC Sbjct: 251 GFPPPFIKGNQSSQWLYEAMAKAWEPWLPADALHTLRIGGFYALTPRPGLRLISLNMNFC 310 Query: 388 SRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVAR 447 SRENFWLLINSTDPAGQLQWLV ELQAAE+RGDKVHIIGHIPPGHCLKSWSWNYY+I+AR Sbjct: 311 SRENFWLLINSTDPAGQLQWLVEELQAAENRGDKVHIIGHIPPGHCLKSWSWNYYKIIAR 370 Query: 448 YENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAPSATTYIGLNPGYRVYQIDGNYS 507 YENTLA QFFGHTHVDEFE+FYDEETLSRPLAVAFLAPSATT+I LNPGYRVYQIDGNY Sbjct: 371 YENTLAGQFFGHTHVDEFEIFYDEETLSRPLAVAFLAPSATTFINLNPGYRVYQIDGNYP 430 Query: 508 GSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQ 567 GSSHVVLDHETYILNLTQAN G P W+ LYRARETYGLP+ +P +WHNLVYRMR D Q Sbjct: 431 GSSHVVLDHETYILNLTQANAAGGTPSWKRLYRARETYGLPDAMPASWHNLVYRMRDDEQ 490 Query: 568 LFQTFWFLYHKGHPPSEPCGTPCRLATLCAQLSARADSPALCRHLMPD 615 LFQTFWFLYHKGHPPSEPCGTPCRLATLCAQLSARADSPALCRHLMP+ Sbjct: 491 LFQTFWFLYHKGHPPSEPCGTPCRLATLCAQLSARADSPALCRHLMPN 538 >5HQN-A nrPDB Length = 473 Score = 754 bits (1946), Expect = 0.0, Method: Composition-based stats. Identities = 410/463 (88%), Positives = 434/463 (93%) Query: 169 HWDIFSSWNISLPTVPKPPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLC 228 HWDIFS+WNISLP+VPKPPPKPPSPPAPGAPVSR+LFLTDLHWDH+YLEGTDP CADPLC Sbjct: 11 HWDIFSTWNISLPSVPKPPPKPPSPPAPGAPVSRVLFLTDLHWDHEYLEGTDPYCADPLC 70 Query: 229 CRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHDVWH 288 CRRGSG PP S+ GAG+WGEYSKCDLPLRTLESLL GLGPAGPF+MVYWTGDIPAHDVW Sbjct: 71 CRRGSGWPPNSQKGAGFWGEYSKCDLPLRTLESLLKGLGPAGPFEMVYWTGDIPAHDVWQ 130 Query: 289 QTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMA 348 Q+RQDQLRALTT+T LVRKFLGPVPVYPAVGNHESTPVN FPPPFI+GN SS+WLYEAMA Sbjct: 131 QSRQDQLRALTTITDLVRKFLGPVPVYPAVGNHESTPVNGFPPPFIKGNQSSQWLYEAMA 190 Query: 349 KAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWL 408 KAWEPWLPA+AL TLRIGGFYAL+P PGLRLISLNMNFCSRENFWLLINSTDPAGQLQWL Sbjct: 191 KAWEPWLPADALHTLRIGGFYALTPRPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWL 250 Query: 409 VGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVF 468 V ELQAAE+RGDKVHIIGHIPPGHCLKSWSWNYY+I+ARYENTLA QFFGHTHVDEFE+F Sbjct: 251 VEELQAAENRGDKVHIIGHIPPGHCLKSWSWNYYKIIARYENTLAGQFFGHTHVDEFEIF 310 Query: 469 YDEETLSRPLAVAFLAPSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANI 528 YDEETLSRPLAVAFLAPSATT+I LNPGYRVYQIDGNY GSSHVVLDHETYILNLTQAN Sbjct: 311 YDEETLSRPLAVAFLAPSATTFINLNPGYRVYQIDGNYPGSSHVVLDHETYILNLTQANA 370 Query: 529 PGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCGT 588 G P W+ LYRARETYGLP+ +P +WHNLVYRMR D QLFQTFWFLYHKGHPPSEPCGT Sbjct: 371 AGGTPSWKRLYRARETYGLPDAMPASWHNLVYRMRDDEQLFQTFWFLYHKGHPPSEPCGT 430 Query: 589 PCRLATLCAQLSARADSPALCRHLMPDGSLPEAQSLWPRPLFC 631 PCRLATLCAQLSARADSPALCRHLMP+GSLP+A LW RPL C Sbjct: 431 PCRLATLCAQLSARADSPALCRHLMPNGSLPDANRLWSRPLLC 473 >5FCB-A nrPDB Length = 433 Score = 544 bits (1401), Expect = e-155, Method: Composition-based stats. Identities = 135/445 (30%), Positives = 210/445 (47%), Gaps = 46/445 (10%) Query: 191 PSPPAPGAP-VSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEY 249 P PA AP V + +TDLH D Y TD D +G+ G +G+ Sbjct: 12 PLAPADRAPAVGQFWHVTDLHLDPTY-HITD-DRTKVCASSKGANAS-----NPGPFGD- 63 Query: 250 SKCDLPLRTLESLLSGLGPAG-PFDMVYWTGDIPAHDV-WHQTRQDQLRALTTVTALVRK 307 CD P + + S + +G + WTGD P H + ++ +T +T V+ Sbjct: 64 VLCDSPYQLILSAFDFIKNSGQEASFMIWTGDSPPHVPVPELSTGTVIKVITNMTMTVQN 123 Query: 308 FLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGG 367 + V+PA+GNH+ P + P + +Y A+A W+PWL EA+ TL+ GG Sbjct: 124 LFPNLQVFPALGNHDYWPQDQLPI-------VTSKVYSAVADLWKPWLGEEAISTLKKGG 176 Query: 368 FYA--LSPYPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHII 425 FY+ ++ PGLR+ISLN N N + +N TDPA Q +WL L ++ +KV+II Sbjct: 177 FYSQKVASNPGLRIISLNTNLYYGPNI-MTLNKTDPANQFEWLENTLNSSLWNKEKVYII 235 Query: 426 GHIPPGHCL---------KSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSR 476 H+P G+ + ++ I RY + +A QF+GHTH D V D+ Sbjct: 236 AHVPVGYLPYATDTPAIRQYYNEKLLDIFRRYSSVIAGQFYGHTHRDSLMVLSDKN--GN 293 Query: 477 PLAVAFLAPSATTYIGL------NPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPG 530 PL F+AP+ T G+ NPG R++Q Y + +LD Y LNLT+AN+ G Sbjct: 294 PLNSVFVAPAVTPVKGVLQKETNNPGVRLFQ----YKPGDYTLLDMVQYYLNLTEANLKG 349 Query: 531 AIPHWQLLYRARETYGLPNTLPTAWHNLVYRM-RGDMQLFQTFWFLYHKGHPPSEPCGTP 589 +W L Y + Y + + P + + LV + D + F ++ Y + S C Sbjct: 350 E-SNWTLEYVLTQAYSVADLQPKSLYALVQQFATKDSKQFLKYYHYYFVSYDSSATCDQH 408 Query: 590 CRLATLCAQLS--ARADSPALCRHL 612 C+ +CA ++ + + L +HL Sbjct: 409 CKTLQVCAIMNLDSMSYDDCLKQHL 433 >5EBE-A nrPDB Length = 418 Score = 541 bits (1394), Expect = e-154, Method: Composition-based stats. Identities = 130/438 (29%), Positives = 204/438 (46%), Gaps = 47/438 (10%) Query: 193 PPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKC 252 PPA G + +TDLH D Y TD D +G+ G +G+ C Sbjct: 2 PPAIG----QFWHVTDLHLDPTY-HITD-DHTKVCASSKGANAS-----NPGPFGD-VLC 49 Query: 253 DLPLRTLESLLSGLGPAG-PFDMVYWTGDIPAHDVWHQTRQDQ-LRALTTVTALVRKFLG 310 D P + + S + +G + WTGD P H + D + +T +T ++ Sbjct: 50 DSPYQLILSAFDFIKNSGQEASFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFP 109 Query: 311 PVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYA 370 + V+PA+GNH+ P + P + +Y A+A W+PWL EA+ TLR GGFY+ Sbjct: 110 NLQVFPALGNHDYWPQDQLPV-------VTSKVYNAVANLWKPWLDEEAISTLRKGGFYS 162 Query: 371 --LSPYPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHI 428 ++ P LR+ISLN N N + +N TDPA Q +WL L ++ +KV+II H+ Sbjct: 163 QKVTTNPNLRIISLNTNLYYGPNI-MTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHV 221 Query: 429 PPGHCLKS---------WSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLA 479 P G+ S ++ I +Y + +A QF+GHTH D V D++ P+ Sbjct: 222 PVGYLPSSQNITAMREYYNEKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKK--GSPVN 279 Query: 480 VAFLAPSATTYIGL------NPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIP 533 F+AP+ T + NPG R++Q Y + +LD Y LNLT+AN+ G Sbjct: 280 SLFVAPAVTPVKSVLEKQTNNPGIRLFQ----YDPRDYKLLDMLQYYLNLTEANLKGE-S 334 Query: 534 HWQLLYRARETYGLPNTLPTAWHNLVYRMRG-DMQLFQTFWFLYHKGHPPSEPCGTPCRL 592 W+L Y +TY + + P + + L + D + F ++ + + S C C+ Sbjct: 335 IWKLEYILTQTYDIEDLQPESLYGLAKQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKA 394 Query: 593 ATLCAQLSARADSPALCR 610 +CA ++ S A C Sbjct: 395 FQICAIMNLDNISYADCL 412 >5KAR-A nrPDB Length = 427 Score = 525 bits (1351), Expect = e-149, Method: Composition-based stats. Identities = 128/435 (29%), Positives = 194/435 (44%), Gaps = 47/435 (10%) Query: 200 VSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTL 259 + R ++DLH D +Y DP P +G P AG WG+Y CD P + Sbjct: 12 LGRFWHISDLHLDPNYTVSKDPLQVCP-----SAGSQPVLN--AGPWGDY-LCDSPWALI 63 Query: 260 ESLLSGLGPAGPF-DMVYWTGDIPAHDVWHQTRQDQLRALTT-VTALVRKFLGPVPVYPA 317 S L + P D + WTGD H + + A+ +T L+++ VY A Sbjct: 64 NSSLYAMKEIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDTKVYAA 123 Query: 318 VGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALS---PY 374 +GNH+ P N FP S +Y +A+ W PWL E+ + G FY+ P Sbjct: 124 LGNHDFHPKNQFPA-------QSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPS 176 Query: 375 PGLRLISLNMNFCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCL 434 R++ LN N N DP Q +WL L A G+ V++IGH+PPG Sbjct: 177 RAGRVVVLNTNLYYSNN-EQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFE 235 Query: 435 K---------SWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAP 485 K S++ Y +++ ++ +A QFFGH H D F +FYD P+ V FL P Sbjct: 236 KTQNKAWFRESFNEEYLKVIQKHHRVIAGQFFGHHHTDSFRMFYD--NTGAPINVMFLTP 293 Query: 486 SATT----YIGL-----NPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQ 536 T G+ NPG R+++ Y ++ + D TY LNL QAN+ P W+ Sbjct: 294 GVTPWKTTLPGVVDGANNPGIRIFE----YDRATLNLKDLVTYFLNLRQANVQ-ETPRWE 348 Query: 537 LLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCGTPCRLATLC 596 YR E Y +P+ ++ H + R+ + + Q ++ +Y+ C CR+ +C Sbjct: 349 QEYRLTEAYQVPDASVSSMHTALTRIASEPHILQRYY-VYNSVSYNHLTCEDSCRIEHVC 407 Query: 597 AQLSARADSPALCRH 611 A ++ A C H Sbjct: 408 AIQHVAFNTYATCLH 422 >2JJ9-A nrPDB Length = 788 Score = 37.4 bits (85), Expect = 0.021, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 42/124 (33%), Gaps = 10/124 (8%) Query: 405 LQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDE 464 WLV ++ + K + IG + ++ ++ Y N QFF H Sbjct: 441 FLWLVKKINNVLCQERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHH---- 496 Query: 465 FEVFYDEETLSRPLAVAFLAPSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLT 524 EE L + F+ GL+ + IDG +LD ++ N T Sbjct: 497 MFKLEQEEYLKEKINWTFID------FGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 550 Query: 525 QANI 528 + Sbjct: 551 DNTL 554 >2NXF-A nrPDB Length = 322 Score = 36.2 bits (82), Expect = 0.046, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 7/65 (10%) Query: 403 GQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLK-----SWS-WNYYRIVARYENTLAAQF 456 QLQWL L ++ + ++V I H+P C +W+ ++ +++ L Sbjct: 204 QQLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADPICLAWNHEAVLSVLRSHQSVLCF-I 262 Query: 457 FGHTH 461 GH H Sbjct: 263 AGHDH 267 >3MKD-A nrPDB Length = 692 Score = 36.2 bits (82), Expect = 0.048, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 42/124 (33%), Gaps = 10/124 (8%) Query: 405 LQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDE 464 WLV ++ + K + IG + ++ ++ Y N QFF H Sbjct: 429 FLWLVKKINNVLCQERKAYFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHH---- 484 Query: 465 FEVFYDEETLSRPLAVAFLAPSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLT 524 EE L + F+ GL+ + IDG +LD ++ N T Sbjct: 485 MFKLEQEEYLKEKINWTFID------FGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 538 Query: 525 QANI 528 + Sbjct: 539 DNTL 542 >3C9F-A nrPDB Length = 557 Score = 35.5 bits (80), Expect = 0.074, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 7/109 (6%) Query: 369 YALSPYPGLRLISLNMNFCSRENFWLLINSTDPAGQLQ--WLVGELQAAEDRGDKVHIIG 426 Y +P G+R+++ + F T A + W L+ D + I+G Sbjct: 150 YFTTPIRGIRVMAFGF-LFDFKRFNSGTRVTPMAETIHEPWFQEALKHEV---DLIIIVG 205 Query: 427 HIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLS 475 H P H + + + + +T+ F GH+H+ +F VF D + Sbjct: 206 HTPISHNWGEFYQVHQYLRQFFPDTIIQYFGGHSHIRDFTVF-DSLSTG 253 >3IF8-A nrPDB Length = 339 Score = 32.8 bits (73), Expect = 0.43, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 67/219 (30%), Gaps = 30/219 (13%) Query: 367 GFYALSPYPGLRLISLNMNFCSRENFWLLINSTDPAGQLQWLVGEL--QAAEDRGDKVHI 424 G Y ++ P + + +N+ + W+ +S+DP G WL EL G +++ Sbjct: 116 GLYTMAHNPNMTHLKINLPVTALPPLWVRCDSSDPEGTC-WLGAELITTNNSITGIVLYV 174 Query: 425 IG-HIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLS-------- 475 + + + + + +T+ ++ F + + D T S Sbjct: 175 VSCKADKNYSVNLENLKNLHKKRHHLSTVTSKGFAQYELFKSSALDDTITASQTAIALDI 234 Query: 476 --RPLAVAFLAPSATTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIP 533 P+ P ++ LN +++ L E L + + + Sbjct: 235 SWSPVDEILQIPPLSSTATLN-----IKVESGEPRGPLNHLYRELKFLLVLADGLRTGVT 289 Query: 534 HWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTF 572 W L + LV D+ F Sbjct: 290 EW-----------LEPLEAKSAVELVQEFLNDLNKLDGF 317 >6MN5-A nrPDB Length = 262 Score = 30.5 bits (67), Expect = 2.4, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 44/128 (34%), Gaps = 8/128 (6%) Query: 253 DLPLRTLESLLSGLGPAGPFDMVYWTG-DIPAHDVWHQTRQDQLRALTT----VTALVRK 307 D PL +E+L + LGP G M W+G D D L ++ + + R Sbjct: 43 DGPLGLIEALRAALGPGGTLVMPSWSGLDDEPFDPATSPVTPDLGVVSDTFWRLPNVKRS 102 Query: 308 FLGPVPVYPAVGNH-ESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIG 366 + A G E + P P ++E + + +A TL + Sbjct: 103 AHP--FAFAAAGPQAEQIISDPLPLPPHSPASPVARVHELDGQVLLLGVGHDANTTLALA 160 Query: 367 GFYALSPY 374 A PY Sbjct: 161 ELMAKVPY 168 >4JE5-A nrPDB Length = 503 Score = 30.1 bits (66), Expect = 3.4, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 23/80 (28%) Query: 123 NLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPT 182 N K +P C +HLF+D + + LG D F N+S+ + Sbjct: 21 NARKPSPLKTC---IHLFQDPNI---------------IFLGGGLPLKDYFPWDNLSVDS 62 Query: 183 VPKPPPKPPSPPAPGAPVSR 202 PKPP P GAP+ Sbjct: 63 -----PKPPFPQGIGAPIDE 77 >4XV0-A nrPDB Length = 302 Score = 29.3 bits (64), Expect = 5.6, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 57/135 (42%), Gaps = 19/135 (14%) Query: 403 GQLQWLVGE--LQAAEDRGDKVHIIGHIPPGHC-LKSW------SWNYYRIVARYENTLA 453 GQL W + + A+ G + GH H L +W + +++ + +T+ Sbjct: 59 GQLNWGDADYLVNFAQQNGKSIR--GHTLIWHSQLPAWVNNINNADTLRQVIRTHVSTVV 116 Query: 454 AQFFGHTHVDEF--EVFYDEETL-----SRPLAVAFLAPSATTYIGLNPGYRVYQIDGNY 506 ++ G + E+F ++ TL SR L F++ + +P R+Y D N Sbjct: 117 GRYKGKIRAWDVVNEIFNEDGTLRSSVFSRLLGEEFVSIAFRAARDADPSARLYINDYNL 176 Query: 507 SGSSH-VVLDHETYI 520 +++ V +TY+ Sbjct: 177 DRANYGKVNGLKTYV 191 >3E7O-A nrPDB Length = 360 Score = 28.9 bits (63), Expect = 6.8, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 21/65 (32%) Query: 286 VWHQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYE 345 V Q + + VR ++ P YP + E P FP + + Sbjct: 235 VIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARD 294 Query: 346 AMAKA 350 ++K Sbjct: 295 LLSKM 299 >5A4P-A nrPDB Length = 354 Score = 28.5 bits (62), Expect = 8.3, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 35/125 (28%), Gaps = 19/125 (15%) Query: 187 PPKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYW 246 P PPS A GA + HWD D + P C R + Sbjct: 66 PGLPPSAAAHGAALLS-------HWDPTLSSDWDGERTAPQCLLRIKRDIMSIYKEPPP- 117 Query: 247 GEYSKCDLP-----LRTLESLLSGLGPAGPFDMVYWTGDIPAHDVWHQTRQDQLRALTTV 301 G + D + G F V+ P H R ++ +TT Sbjct: 118 GMFVVPDTVDMTKIHALITGPFDTPYEGGFFLFVF---RCPPDYPIHPPR---VKLMTTG 171 Query: 302 TALVR 306 VR Sbjct: 172 NNTVR 176 >5AOO-B nrPDB Length = 370 Score = 28.5 bits (62), Expect = 9.2, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 14/37 (37%) Query: 182 TVPKPPPKPPSPPAPGAPVSRILFLTDLHWDHDYLEG 218 P P P P P PG R L + W ++ G Sbjct: 153 ATPVPLPNPDEPSQPGPSGDRTWLLDTVTWSQEFTRG 189 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.130 0.402 Lambda K H 0.267 0.0405 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,688,417 Number of Sequences: 36641 Number of extensions: 1195868 Number of successful extensions: 3886 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 21 Number of HSP's that attempted gapping in prelim test: 3620 Number of HSP's gapped (non-prelim): 129 length of query: 631 length of database: 10,336,785 effective HSP length: 103 effective length of query: 528 effective length of database: 6,562,762 effective search space: 3465138336 effective search space used: 3465138336 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 62 (28.5 bits)