BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P17074 (145 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5A2Q-T nrPDB 295 3e-81 4V6W-AT nrPDB 193 3e-50 4V3P-SS nrPDB 174 1e-44 3J6Y-19 nrPDB 150 3e-37 3J80-T nrPDB 144 2e-35 5XXU-T nrPDB 140 2e-34 3J7A-Y nrPDB 104 2e-23 5XYI-T nrPDB 103 3e-23 5JB3-U nrPDB 100 2e-22 4V5O-AT nrPDB 98 2e-21 4V8M-AO nrPDB 92 1e-19 5OPT-o nrPDB 91 2e-19 5T2A-AO nrPDB 87 2e-18 6IJJ-8 nrPDB 32 0.078 6JC0-B nrPDB 29 0.64 2WO6-A nrPDB 28 1.9 1GO5-A nrPDB 26 6.7 2ZZQ-A nrPDB 25 8.7 1JKG-B nrPDB 25 9.3 >5A2Q-T nrPDB Length = 146 Score = 295 bits (756), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 144/145 (99%), Positives = 144/145 (99%) Query: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60 Query: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120 ARHLYLRGGAGVGSMTKIYGGRQRNGV PSHFSRGSKSVARRVLQALEGLKMVEKDQDGG Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120 Query: 121 RKLTPQGQRDLDRIAGQVAAANKKH 145 RKLTPQGQRDLDRIAGQVAAANKKH Sbjct: 121 RKLTPQGQRDLDRIAGQVAAANKKH 145 >4V6W-AT nrPDB Length = 156 Score = 193 bits (490), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 91/138 (65%), Positives = 107/138 (77%) Query: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60 MPGVTVKD++Q +A+A FLKK+GKLKVP+ +D VK AK KELAPYD +WFY R AS Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60 Query: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120 RHLY R AGVGS+TKIYGGR+RNGV PSHF R + AR+ LQALE ++VEK DGG Sbjct: 61 LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120 Query: 121 RKLTPQGQRDLDRIAGQV 138 RKL+ GQRDLDRIA Q+ Sbjct: 121 RKLSSIGQRDLDRIANQI 138 >4V3P-SS nrPDB Length = 146 Score = 174 bits (442), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 79/134 (58%), Positives = 104/134 (77%) Query: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHL 64 TVKDVN EFV+A +A LK+SGK+++PEWVD VK A+ KEL PYD +W+YTRAAS AR + Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKI 67 Query: 65 YLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLT 124 YLR G GVG KIYGGRQRNG RP HF + S +++R +LQ L+ + +++ D GGR +T Sbjct: 68 YLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLIT 127 Query: 125 PQGQRDLDRIAGQV 138 QG+RDLD++AG+V Sbjct: 128 SQGRRDLDQVAGRV 141 >3J6Y-19 nrPDB Length = 144 Score = 150 bits (378), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 73/138 (52%), Positives = 96/138 (69%), Gaps = 1/138 (0%) Query: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYD-ENWFYTRAAS 59 MPGV+V+DV Q+F+ A A+FL++ GKL+VP +VD VK + E+ P D E WFY RAAS Sbjct: 1 MPGVSVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAAS 60 Query: 60 TARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDG 119 ARH+Y+R GVG + K+YGG + GVRP S S+ R+VLQALE + +VE G Sbjct: 61 VARHIYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKG 120 Query: 120 GRKLTPQGQRDLDRIAGQ 137 GR+++ GQRDLDRIA Q Sbjct: 121 GRRISENGQRDLDRIAAQ 138 >3J80-T nrPDB Length = 144 Score = 144 bits (362), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 72/136 (52%), Positives = 93/136 (68%), Gaps = 1/136 (0%) Query: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYD-ENWFYTRAAS 59 MPGV+V+DV Q+F+ A+FL++ GKL+VP +VD VK + EL P D E WFY RAAS Sbjct: 1 MPGVSVRDVPAQDFINNYASFLQRQGKLEVPGYVDIVKTSAGNELPPQDSEGWFYKRAAS 60 Query: 60 TARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDG 119 ARH+YLR GVG + K+YGG + GVRP S S+ R+VLQ+LE L +VE G Sbjct: 61 VARHIYLRKQVGVGKLNKLYGGAKNRGVRPHKHVDASGSINRKVLQSLEKLGVVEISPKG 120 Query: 120 GRKLTPQGQRDLDRIA 135 GR+++ G RDLDRIA Sbjct: 121 GRRISDNGLRDLDRIA 136 >5XXU-T nrPDB Length = 160 Score = 140 bits (353), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 68/136 (50%), Positives = 88/136 (64%), Gaps = 1/136 (0%) Query: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHL 64 TVKDV F+ A LKK G+ ++P+W+D VK A KELAPYD +W Y RAA+ RHL Sbjct: 18 TVKDVKADAFIALYANHLKKRGRFQLPKWIDYVKTAHAKELAPYDPDWLYIRAAAILRHL 77 Query: 65 YLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQD-GGRKL 123 Y+R GVG K++ RQR GVRP+H S+ S + R +LQ E + +VE D + GR+L Sbjct: 78 YIRPDCGVGGFRKVFSCRQRRGVRPNHTSKASGKIIRYILQQFEEMGLVESDPEKPGRRL 137 Query: 124 TPQGQRDLDRIAGQVA 139 T GQR+LD IA Q A Sbjct: 138 TKNGQRELDVIARQCA 153 >3J7A-Y nrPDB Length = 170 Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 51/132 (38%), Positives = 79/132 (59%), Gaps = 1/132 (0%) Query: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHL 64 +KDV+ F+R+ A LK K+ P+W VK K ++LAP +E+W++ RA+S R L Sbjct: 28 CIKDVDADLFIRSYATHLKLHNKITYPKWCTFVKTGKGRKLAPLNEDWYFIRASSILRRL 87 Query: 65 YLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKD-QDGGRKL 123 YL GVG + + + +QR GV P+H S S + R +LQ LE L VE++ + GR+L Sbjct: 88 YLHPDIGVGFLRRQFSSKQRRGVAPNHTSLASGKILRSILQQLENLGYVEQNPKKKGRRL 147 Query: 124 TPQGQRDLDRIA 135 T +G+ ++ A Sbjct: 148 TTKGENAINNFA 159 >5XYI-T nrPDB Length = 148 Score = 103 bits (257), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 52/133 (39%), Positives = 79/133 (59%), Gaps = 1/133 (0%) Query: 3 GVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTAR 62 G ++++ FV ALA +++ +K PEW D VK A K++AP ++NWFYTRAA+ R Sbjct: 10 GFQAREISADVFVNALAKHFQENRIVKPPEWADLVKTAALKQMAPSNQNWFYTRAAAVIR 69 Query: 63 HLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRK 122 +Y+ A + ++ YG + P H S+ V R +LQ LE +V K + GR+ Sbjct: 70 QIYMHHDASLSGLSFHYGANLKAVTMPKHHHNASRKVIRSILQQLEKSDLV-KVGEKGRQ 128 Query: 123 LTPQGQRDLDRIA 135 LTP+GQR LD++A Sbjct: 129 LTPKGQRLLDQVA 141 >5JB3-U nrPDB Length = 150 Score = 100 bits (249), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/134 (40%), Positives = 74/134 (55%) Query: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHL 64 TV DV V +A LK+ ++K PEW VK +HKE P E+W+Y R AS R + Sbjct: 3 TVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRV 62 Query: 65 YLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLT 124 YL G G+ + YGGR+ G P F + S+ R+ LQ LE VEK GR +T Sbjct: 63 YLDGPVGIERLRTYYGGRKNRGHAPEKFYKAGGSIIRKALQQLEAAGFVEKVPGKGRVIT 122 Query: 125 PQGQRDLDRIAGQV 138 P+G+ LD+IA ++ Sbjct: 123 PKGRSFLDKIATEL 136 >4V5O-AT nrPDB Length = 155 Score = 97.8 bits (242), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 52/141 (36%), Positives = 83/141 (58%), Gaps = 7/141 (4%) Query: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHL 64 TVKDV +F+R A+ LKK+ KL +PE+ + +ELAP D +W Y R A+ AR + Sbjct: 9 TVKDVAAADFIREYASHLKKANKLSIPEFTQWTTTSVARELAPQDSDWVYIRTAALARKV 68 Query: 65 YLRGGAGVGSMTKIYG-GRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRK- 122 YL+ G+ ++ I+G + R +R H + K + R L++LE LK++ KD++ K Sbjct: 69 YLKPHTGISTLKHIFGSNKDRGNLRNKHQACHGK-ILRWALKSLEDLKIIRKDKNSATKK 127 Query: 123 ----LTPQGQRDLDRIAGQVA 139 +T +G +L+RIA Q+A Sbjct: 128 FSRVITKEGMTELNRIATQIA 148 >4V8M-AO nrPDB Length = 167 Score = 91.7 bits (226), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 44/137 (32%), Positives = 79/137 (57%) Query: 3 GVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTAR 62 G T++DV+ +V+ + K+ GK+ VP + VK + +E AP + +W+Y R A+ R Sbjct: 20 GATLRDVHPWRWVKICSQHFKQEGKMMVPNCAEIVKTSHGRERAPQNPDWYYIRCAAVLR 79 Query: 63 HLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRK 122 +YLR G G G ++K + ++ G RP +R SK + ++L L+++EK + G + Sbjct: 80 AVYLRPGVGYGGLSKRFSSKKNRGSRPEITTRASKGLLHWCCKSLTKLELLEKCKGAGHR 139 Query: 123 LTPQGQRDLDRIAGQVA 139 +T G++ D IA ++A Sbjct: 140 VTKLGRKVADTIAFKIA 156 >5OPT-o nrPDB Length = 167 Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 46/137 (33%), Positives = 77/137 (56%) Query: 3 GVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTAR 62 G T+KDV+ +V+ + K+ GKL VP + VK + +E AP + +W+Y R A+ R Sbjct: 20 GATMKDVHPWRWVKLCSQHFKQEGKLMVPNCTEIVKSSHGRERAPQNPDWYYIRCAAILR 79 Query: 63 HLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRK 122 +Y+R G G G ++K + ++ G RP R SK + ++L L ++EK + G + Sbjct: 80 AVYMRPGVGYGGLSKRFSNKKNRGSRPEITVRASKGLLHWGCKSLTKLGLIEKCESSGHR 139 Query: 123 LTPQGQRDLDRIAGQVA 139 +T G++ D IA +VA Sbjct: 140 ITKNGRKLADAIAFKVA 156 >5T2A-AO nrPDB Length = 179 Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 44/136 (32%), Positives = 74/136 (54%) Query: 3 GVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTAR 62 G ++KDV+ +++ A K+ GK+ VP + +K + +E AP + +W+Y R A+ R Sbjct: 35 GASLKDVSAWRWIKTAARHFKQEGKIFVPNCTEIMKSSHGRERAPQNPDWYYIRCAAVLR 94 Query: 63 HLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRK 122 +YLR G G G ++K +G ++ G RP H S ++L L +VE G++ Sbjct: 95 AIYLRPGVGYGGLSKRFGNKKNYGSRPEHTVTSSTGPLHWACKSLTKLGLVEPGAQSGQR 154 Query: 123 LTPQGQRDLDRIAGQV 138 LT +G + D +A QV Sbjct: 155 LTRKGHKFADSLAFQV 170 >6IJJ-8 nrPDB Length = 272 Score = 32.3 bits (72), Expect = 0.078, Method: Compositional matrix adjust. Identities = 13/31 (41%), Positives = 17/31 (54%) Query: 18 LAAFLKKSGKLKVPEWVDTVKLAKHKELAPY 48 + L K+G L VPEW D K+A AP+ Sbjct: 118 IPGLLTKAGALNVPEWYDAGKVAIENSFAPW 148 >6JC0-B nrPDB Length = 142 Score = 29.3 bits (64), Expect = 0.64, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 7/59 (11%) Query: 89 PSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLT-------PQGQRDLDRIAGQVAA 140 P + VA A+ G V +D DGGR + P QR L+ +A ++AA Sbjct: 14 PISLTEYEALVAHEAAGAVVGFAGVVRDHDGGRSVLRLEYSAHPTAQRTLEEVAEEIAA 72 >2WO6-A nrPDB Length = 382 Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Query: 68 GGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQAL-EGLKMVEKDQDGGRKLTPQ 126 G V M KI + G+ P+H + AR+ + L +G ++K +DG R+ P Sbjct: 260 GANEVDQMNKIV---EVLGIPPAHILDQAPK-ARKFFEKLPDGTWNLKKTKDGKREYKPP 315 Query: 127 GQRDLDRIAG 136 G R L I G Sbjct: 316 GTRKLHNILG 325 >1GO5-A nrPDB Length = 69 Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust. Identities = 10/20 (50%), Positives = 12/20 (60%) Query: 49 DENWFYTRAASTARHLYLRG 68 D NW YTR+A HL +G Sbjct: 41 DNNWDYTRSAQAFTHLKAKG 60 >2ZZQ-A nrPDB Length = 552 Score = 25.4 bits (54), Expect = 8.7, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 16/29 (55%) Query: 43 KELAPYDENWFYTRAASTARHLYLRGGAG 71 + L P + N +R +STARH RG G Sbjct: 253 RNLTPGNTNTRVSRYSSTARHRLRRGADG 281 >1JKG-B nrPDB Length = 250 Score = 25.4 bits (54), Expect = 9.3, Method: Compositional matrix adjust. Identities = 10/20 (50%), Positives = 12/20 (60%) Query: 49 DENWFYTRAASTARHLYLRG 68 D NW YTR+A HL +G Sbjct: 222 DNNWDYTRSAQAFTHLKAKG 241 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5A2Q-T nrPDB 217 2e-57 4V3P-SS nrPDB 201 7e-53 5OPT-o nrPDB 199 3e-52 5XXU-T nrPDB 199 5e-52 3J80-T nrPDB 195 5e-51 4V6W-AT nrPDB 195 6e-51 3J6Y-19 nrPDB 195 6e-51 4V8M-AO nrPDB 194 1e-50 5T2A-AO nrPDB 193 3e-50 3J7A-Y nrPDB 184 2e-47 5JB3-U nrPDB 176 3e-45 5XYI-T nrPDB 166 3e-42 4V5O-AT nrPDB 161 9e-41 Sequences not found previously or not previously below threshold: 5A9Q-8 nrPDB 31 0.22 4BMA-A nrPDB 31 0.24 3AC0-A nrPDB 30 0.52 5LF3-J nrPDB 28 2.0 6JDK-A nrPDB 26 4.9 1QHO-A nrPDB 26 5.2 CONVERGED! >5A2Q-T nrPDB Length = 146 Score = 217 bits (552), Expect = 2e-57, Method: Composition-based stats. Identities = 144/145 (99%), Positives = 144/145 (99%) Query: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60 Query: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120 ARHLYLRGGAGVGSMTKIYGGRQRNGV PSHFSRGSKSVARRVLQALEGLKMVEKDQDGG Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120 Query: 121 RKLTPQGQRDLDRIAGQVAAANKKH 145 RKLTPQGQRDLDRIAGQVAAANKKH Sbjct: 121 RKLTPQGQRDLDRIAGQVAAANKKH 145 >4V3P-SS nrPDB Length = 146 Score = 201 bits (512), Expect = 7e-53, Method: Composition-based stats. Identities = 79/134 (58%), Positives = 104/134 (77%) Query: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHL 64 TVKDVN EFV+A +A LK+SGK+++PEWVD VK A+ KEL PYD +W+YTRAAS AR + Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKI 67 Query: 65 YLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLT 124 YLR G GVG KIYGGRQRNG RP HF + S +++R +LQ L+ + +++ D GGR +T Sbjct: 68 YLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLIT 127 Query: 125 PQGQRDLDRIAGQV 138 QG+RDLD++AG+V Sbjct: 128 SQGRRDLDQVAGRV 141 >5OPT-o nrPDB Length = 167 Score = 199 bits (506), Expect = 3e-52, Method: Composition-based stats. Identities = 46/137 (33%), Positives = 77/137 (56%) Query: 3 GVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTAR 62 G T+KDV+ +V+ + K+ GKL VP + VK + +E AP + +W+Y R A+ R Sbjct: 20 GATMKDVHPWRWVKLCSQHFKQEGKLMVPNCTEIVKSSHGRERAPQNPDWYYIRCAAILR 79 Query: 63 HLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRK 122 +Y+R G G G ++K + ++ G RP R SK + ++L L ++EK + G + Sbjct: 80 AVYMRPGVGYGGLSKRFSNKKNRGSRPEITVRASKGLLHWGCKSLTKLGLIEKCESSGHR 139 Query: 123 LTPQGQRDLDRIAGQVA 139 +T G++ D IA +VA Sbjct: 140 ITKNGRKLADAIAFKVA 156 >5XXU-T nrPDB Length = 160 Score = 199 bits (505), Expect = 5e-52, Method: Composition-based stats. Identities = 68/136 (50%), Positives = 88/136 (64%), Gaps = 1/136 (0%) Query: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHL 64 TVKDV F+ A LKK G+ ++P+W+D VK A KELAPYD +W Y RAA+ RHL Sbjct: 18 TVKDVKADAFIALYANHLKKRGRFQLPKWIDYVKTAHAKELAPYDPDWLYIRAAAILRHL 77 Query: 65 YLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDG-GRKL 123 Y+R GVG K++ RQR GVRP+H S+ S + R +LQ E + +VE D + GR+L Sbjct: 78 YIRPDCGVGGFRKVFSCRQRRGVRPNHTSKASGKIIRYILQQFEEMGLVESDPEKPGRRL 137 Query: 124 TPQGQRDLDRIAGQVA 139 T GQR+LD IA Q A Sbjct: 138 TKNGQRELDVIARQCA 153 >3J80-T nrPDB Length = 144 Score = 195 bits (496), Expect = 5e-51, Method: Composition-based stats. Identities = 72/137 (52%), Positives = 93/137 (67%), Gaps = 1/137 (0%) Query: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYD-ENWFYTRAAS 59 MPGV+V+DV Q+F+ A+FL++ GKL+VP +VD VK + EL P D E WFY RAAS Sbjct: 1 MPGVSVRDVPAQDFINNYASFLQRQGKLEVPGYVDIVKTSAGNELPPQDSEGWFYKRAAS 60 Query: 60 TARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDG 119 ARH+YLR GVG + K+YGG + GVRP S S+ R+VLQ+LE L +VE G Sbjct: 61 VARHIYLRKQVGVGKLNKLYGGAKNRGVRPHKHVDASGSINRKVLQSLEKLGVVEISPKG 120 Query: 120 GRKLTPQGQRDLDRIAG 136 GR+++ G RDLDRIA Sbjct: 121 GRRISDNGLRDLDRIAA 137 >4V6W-AT nrPDB Length = 156 Score = 195 bits (496), Expect = 6e-51, Method: Composition-based stats. Identities = 91/138 (65%), Positives = 107/138 (77%) Query: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60 MPGVTVKD++Q +A+A FLKK+GKLKVP+ +D VK AK KELAPYD +WFY R AS Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60 Query: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG 120 RHLY R AGVGS+TKIYGGR+RNGV PSHF R + AR+ LQALE ++VEK DGG Sbjct: 61 LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120 Query: 121 RKLTPQGQRDLDRIAGQV 138 RKL+ GQRDLDRIA Q+ Sbjct: 121 RKLSSIGQRDLDRIANQI 138 >3J6Y-19 nrPDB Length = 144 Score = 195 bits (496), Expect = 6e-51, Method: Composition-based stats. Identities = 73/138 (52%), Positives = 96/138 (69%), Gaps = 1/138 (0%) Query: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYD-ENWFYTRAAS 59 MPGV+V+DV Q+F+ A A+FL++ GKL+VP +VD VK + E+ P D E WFY RAAS Sbjct: 1 MPGVSVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAAS 60 Query: 60 TARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDG 119 ARH+Y+R GVG + K+YGG + GVRP S S+ R+VLQALE + +VE G Sbjct: 61 VARHIYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKG 120 Query: 120 GRKLTPQGQRDLDRIAGQ 137 GR+++ GQRDLDRIA Q Sbjct: 121 GRRISENGQRDLDRIAAQ 138 >4V8M-AO nrPDB Length = 167 Score = 194 bits (493), Expect = 1e-50, Method: Composition-based stats. Identities = 44/137 (32%), Positives = 79/137 (57%) Query: 3 GVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTAR 62 G T++DV+ +V+ + K+ GK+ VP + VK + +E AP + +W+Y R A+ R Sbjct: 20 GATLRDVHPWRWVKICSQHFKQEGKMMVPNCAEIVKTSHGRERAPQNPDWYYIRCAAVLR 79 Query: 63 HLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRK 122 +YLR G G G ++K + ++ G RP +R SK + ++L L+++EK + G + Sbjct: 80 AVYLRPGVGYGGLSKRFSSKKNRGSRPEITTRASKGLLHWCCKSLTKLELLEKCKGAGHR 139 Query: 123 LTPQGQRDLDRIAGQVA 139 +T G++ D IA ++A Sbjct: 140 VTKLGRKVADTIAFKIA 156 >5T2A-AO nrPDB Length = 179 Score = 193 bits (490), Expect = 3e-50, Method: Composition-based stats. Identities = 44/136 (32%), Positives = 74/136 (54%) Query: 3 GVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTAR 62 G ++KDV+ +++ A K+ GK+ VP + +K + +E AP + +W+Y R A+ R Sbjct: 35 GASLKDVSAWRWIKTAARHFKQEGKIFVPNCTEIMKSSHGRERAPQNPDWYYIRCAAVLR 94 Query: 63 HLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRK 122 +YLR G G G ++K +G ++ G RP H S ++L L +VE G++ Sbjct: 95 AIYLRPGVGYGGLSKRFGNKKNYGSRPEHTVTSSTGPLHWACKSLTKLGLVEPGAQSGQR 154 Query: 123 LTPQGQRDLDRIAGQV 138 LT +G + D +A QV Sbjct: 155 LTRKGHKFADSLAFQV 170 >3J7A-Y nrPDB Length = 170 Score = 184 bits (466), Expect = 2e-47, Method: Composition-based stats. Identities = 54/141 (38%), Positives = 82/141 (58%), Gaps = 4/141 (2%) Query: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHL 64 +KDV+ F+R+ A LK K+ P+W VK K ++LAP +E+W++ RA+S R L Sbjct: 28 CIKDVDADLFIRSYATHLKLHNKITYPKWCTFVKTGKGRKLAPLNEDWYFIRASSILRRL 87 Query: 65 YLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQ-DGGRKL 123 YL GVG + + + +QR GV P+H S S + R +LQ LE L VE++ GR+L Sbjct: 88 YLHPDIGVGFLRRQFSSKQRRGVAPNHTSLASGKILRSILQQLENLGYVEQNPKKKGRRL 147 Query: 124 TPQGQRDLDRIAGQVAAANKK 144 T +G+ ++ A + NKK Sbjct: 148 TTKGENAINNFARYI---NKK 165 >5JB3-U nrPDB Length = 150 Score = 176 bits (446), Expect = 3e-45, Method: Composition-based stats. Identities = 54/135 (40%), Positives = 74/135 (54%) Query: 4 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63 TV DV V +A LK+ ++K PEW VK +HKE P E+W+Y R AS R Sbjct: 2 ATVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRR 61 Query: 64 LYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKL 123 +YL G G+ + YGGR+ G P F + S+ R+ LQ LE VEK GR + Sbjct: 62 VYLDGPVGIERLRTYYGGRKNRGHAPEKFYKAGGSIIRKALQQLEAAGFVEKVPGKGRVI 121 Query: 124 TPQGQRDLDRIAGQV 138 TP+G+ LD+IA ++ Sbjct: 122 TPKGRSFLDKIATEL 136 >5XYI-T nrPDB Length = 148 Score = 166 bits (421), Expect = 3e-42, Method: Composition-based stats. Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 1/137 (0%) Query: 3 GVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTAR 62 G ++++ FV ALA +++ +K PEW D VK A K++AP ++NWFYTRAA+ R Sbjct: 10 GFQAREISADVFVNALAKHFQENRIVKPPEWADLVKTAALKQMAPSNQNWFYTRAAAVIR 69 Query: 63 HLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRK 122 +Y+ A + ++ YG + P H S+ V R +LQ LE +V K + GR+ Sbjct: 70 QIYMHHDASLSGLSFHYGANLKAVTMPKHHHNASRKVIRSILQQLEKSDLV-KVGEKGRQ 128 Query: 123 LTPQGQRDLDRIAGQVA 139 LTP+GQR LD++A Sbjct: 129 LTPKGQRLLDQVATSCG 145 >4V5O-AT nrPDB Length = 155 Score = 161 bits (408), Expect = 9e-41, Method: Composition-based stats. Identities = 51/147 (34%), Positives = 84/147 (57%), Gaps = 7/147 (4%) Query: 4 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63 TVKDV +F+R A+ LKK+ KL +PE+ + +ELAP D +W Y R A+ AR Sbjct: 8 FTVKDVAAADFIREYASHLKKANKLSIPEFTQWTTTSVARELAPQDSDWVYIRTAALARK 67 Query: 64 LYLRGGAGVGSMTKIYGGRQRNG-VRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGG-- 120 +YL+ G+ ++ I+G + G +R H + + R L++LE LK++ KD++ Sbjct: 68 VYLKPHTGISTLKHIFGSNKDRGNLRNKHQACH-GKILRWALKSLEDLKIIRKDKNSATK 126 Query: 121 ---RKLTPQGQRDLDRIAGQVAAANKK 144 R +T +G +L+RIA Q+A ++ Sbjct: 127 KFSRVITKEGMTELNRIATQIAIKQRQ 153 >5A9Q-8 nrPDB Length = 656 Score = 30.7 bits (68), Expect = 0.22, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 13/93 (13%) Query: 44 ELAPYDENWFYTRA-----ASTARHLYLRGG---AGVGSMTKIYGGRQRNG--VRPSHFS 93 E+ P + R + R L+ G+ + + G+ R VR S Sbjct: 46 EMVPSCPFIYIIRKDVDVYSQILRKLFNESHGIFLGLQRIDEELTGKSRKSQLVRVSKNY 105 Query: 94 RGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQ 126 R SV R ++ + + + KD GR+ + Q Sbjct: 106 R---SVIRACMEEMHQVAIAAKDPANGRQFSSQ 135 >4BMA-A nrPDB Length = 509 Score = 30.7 bits (68), Expect = 0.24, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%) Query: 22 LKKSGKLKVPEWVDTVK-LAKHKELAPYDENWFYTRAASTARHLY 65 L+K+GK V E+ + K A+ K+ P + RAA+ H Y Sbjct: 319 LQKNGKPDVVEYSEIDKETAEAKD--PKQPDVLKFRAANIVNHYY 361 >3AC0-A nrPDB Length = 845 Score = 29.6 bits (65), Expect = 0.52, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 30/96 (31%), Gaps = 10/96 (10%) Query: 50 ENWF--YTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQ-- 105 +WF YT AA+ L + G R + R+VL+ Sbjct: 224 SDWFGTYTTAAAIKNGLDIEFP-GPTRWRTRALVSHSLNSREQITTEDVDDRVRQVLKMI 282 Query: 106 -----ALEGLKMVEKDQDGGRKLTPQGQRDLDRIAG 136 LE +VE + T + L +IA Sbjct: 283 KFVVDNLEKTGIVENGPESTSNNTKETSDLLRKIAA 318 >5LF3-J nrPDB Length = 201 Score = 27.7 bits (60), Expect = 2.0, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 20/48 (41%) Query: 89 PSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAG 136 P+ + + R+ L+ L+ ++ R + G DLD I+ Sbjct: 149 PTISRERAVELLRKCLEELQKRFILNLPTFSVRIIDKNGIHDLDNISF 196 >6JDK-A nrPDB Length = 544 Score = 26.1 bits (56), Expect = 4.9, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 19/48 (39%), Gaps = 7/48 (14%) Query: 13 EFVRALAAFLKKSGKLKVP-------EWVDTVKLAKHKELAPYDENWF 53 E+V ++++ K ++ EW + L P ++W+ Sbjct: 458 EWVVDCLKHMRENNKGRIEATAQAEEEWAQLLNSIAGMTLFPRADSWY 505 >1QHO-A nrPDB Length = 686 Score = 26.1 bits (56), Expect = 5.2, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 10/19 (52%) Query: 37 VKLAKHKELAPYDENWFYT 55 V A+ LAP +WFY Sbjct: 620 VNNAQGPLLAPNYPDWFYV 638 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.140 0.386 Lambda K H 0.267 0.0429 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,827,517 Number of Sequences: 36641 Number of extensions: 224787 Number of successful extensions: 578 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 39 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 528 Number of HSP's gapped (non-prelim): 47 length of query: 145 length of database: 10,336,785 effective HSP length: 88 effective length of query: 57 effective length of database: 7,112,377 effective search space: 405405489 effective search space used: 405405489 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 54 (25.3 bits)