BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P16622
         (393 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

1LBQ-A nrPDB                                                          757   0.0  
3W1W-A nrPDB                                                          339   1e-93
2C8J-A nrPDB                                                          109   2e-24
1AK1-A nrPDB                                                           99   3e-21
4JC0-A nrPDB                                                           32   0.36 
6BX3-K nrPDB                                                           30   1.5  
3OP6-A nrPDB                                                           29   3.0  
4TVE-A nrPDB                                                           29   4.1  
4QLA-A nrPDB                                                           28   5.9  

>1LBQ-A nrPDB
          Length = 362

 Score =  757 bits (1955), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/362 (100%), Positives = 362/362 (100%)

Query: 32  NAQKRSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKI 91
           NAQKRSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKI
Sbjct: 1   NAQKRSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKI 60

Query: 92  EKQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLK 151
           EKQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLK
Sbjct: 61  EKQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLK 120

Query: 152 DGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSE 211
           DGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSE
Sbjct: 121 DGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSE 180

Query: 212 NITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRL 271
           NITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRL
Sbjct: 181 NITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRL 240

Query: 272 VWQSQVGPKPWLGAQTAEIAEFLGPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESEYKD 331
           VWQSQVGPKPWLGAQTAEIAEFLGPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESEYKD
Sbjct: 241 VWQSQVGPKPWLGAQTAEIAEFLGPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESEYKD 300

Query: 332 KFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLPLDFALGKSNDPVKDLSLVFGNHE 391
           KFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLPLDFALGKSNDPVKDLSLVFGNHE
Sbjct: 301 KFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLPLDFALGKSNDPVKDLSLVFGNHE 360

Query: 392 ST 393
           ST
Sbjct: 361 ST 362


>3W1W-A nrPDB
          Length = 371

 Score =  339 bits (870), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 176/345 (51%), Positives = 242/345 (70%), Gaps = 7/345 (2%)

Query: 34  QKRSP-TGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIE 92
           QKR P TGI+++NMGGP  + + +DFL +LF D DL+ +    Q  +A +IAK  TPKI+
Sbjct: 11  QKRKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPI--QNKLAPFIAKRLTPKIQ 68

Query: 93  KQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKD 152
           +QYR IGGGSPI+ W+  Q   + K+LD+  P TAPHK Y+ FRY  PLT E  ++M +D
Sbjct: 69  EQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERD 128

Query: 153 GVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSEN 212
           G+++A+AF+QYP +S STTGSS+N ++R    +  + ++ WS IDRWPT+  LI+ F+++
Sbjct: 129 GLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADH 188

Query: 213 ITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRLV 272
           I K+L  FP   R +VV+LFSAHSLPM VVN GD YP EV+ATV  +M++L++ NPYRLV
Sbjct: 189 ILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLV 248

Query: 273 WQSQVGPKPWLGAQTAEIAEFLGPK-VDGLMFIPIAFTSDHIETLHEIDL---GVIGESE 328
           WQS+VGP PWLG QT E  + L  +    ++ +PIAFTSDHIETL+E+D+    V+ +  
Sbjct: 249 WQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKEC 308

Query: 329 YKDKFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLPLDFAL 373
             +  +R ESLNGN  F + +ADLV SH+QSN+L S QL L   L
Sbjct: 309 GVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPL 353


>2C8J-A nrPDB
          Length = 311

 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 133/282 (47%), Gaps = 15/282 (5%)

Query: 82  YIAKFRTPKIE------KQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAF 135
           +I + R P  E      ++YR IGG SP+   +  QA ++ K L++   E   H  Y+  
Sbjct: 27  HIRRGRKPSPEMLEDLTERYRAIGGISPLATITLEQAKKLEKRLNEVQDEVEYHM-YLGL 85

Query: 136 RYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSV 195
           ++ +P   +  K+M  DG++ A+A    PH+S  +  S +     + + L +   ++   
Sbjct: 86  KHIEPFIEDAVKEMHNDGIQDAIALVLAPHYSTFSVKSYVGRAQEEAEKLGN---LTIHG 142

Query: 196 IDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAAT 255
           ID W      I+ + + +           R+K VL+ SAHSLP  ++  GD YP ++  T
Sbjct: 143 IDSWYKEPKFIQYWVDAVKSIYSGMSDAEREKAVLIVSAHSLPEKIIAMGDPYPDQLNET 202

Query: 256 VYNIMQKLKFKNPYRLVWQSQVG-PKPWLGAQTAEIAEFLGPKVDGLMFI--PIAFTSDH 312
              I +  +  N Y + WQS    P PW+G    ++   L  K     F+  P+ F ++H
Sbjct: 203 ADYIARGAEVAN-YAVGWQSAGNTPDPWIGPDVQDLTRELNEKYGYTSFVYAPVGFVAEH 261

Query: 313 IETLHEIDLGV-IGESEYKDKFKRCESLNGNQTFIEGMADLV 353
           +E L++ D    +   E   K+ R E  N +  FI+ + D+V
Sbjct: 262 LEVLYDNDFECKVVTDEIGAKYYRPEMPNASDAFIDCLTDVV 303


>1AK1-A nrPDB
          Length = 310

 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 132/291 (45%), Gaps = 25/291 (8%)

Query: 82  YIAKFRTPK------IEKQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAF 135
           +I + R P+      ++ +Y  IGG SP+ + +E QA  + + L++   E    K Y+  
Sbjct: 28  HIRRGRKPEPEMLQDLKDRYEAIGGISPLAQITEQQAHNLEQHLNEIQDEIT-FKAYIGL 86

Query: 136 RYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSV 195
           ++ +P   +   +M KDG+ +AV+    PHFS  +  S       + + L     ++ + 
Sbjct: 87  KHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYNKRAKEEAEKLGG---LTITS 143

Query: 196 IDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAAT 255
           ++ W      +  + + + +     P+  R+  +L+ SAHSLP  +   GD YP ++  +
Sbjct: 144 VESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIKEFGDPYPDQLHES 203

Query: 256 VYNIMQKLKFKNPYRLVWQSQVG-PKPWLGAQTAEIAE--FLGPKVDGLMFIPIAFTSDH 312
              I +       Y + WQS+   P PWLG    ++    F        +++P+ F +DH
Sbjct: 204 AKLIAEGAGVSE-YAVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVGFVADH 262

Query: 313 IETLHEIDLGV------IGESEYKDKFKRCESLNGNQTFIEGMADLVKSHL 357
           +E L++ D         IG S Y     R E  N    FI+ +A +V   L
Sbjct: 263 LEVLYDNDYECKVVTDDIGASYY-----RPEMPNAKPEFIDALATVVLKKL 308


>4JC0-A nrPDB
          Length = 438

 Score = 32.3 bits (72), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 3/64 (4%)

Query: 125 ETAPHKPYVAFRYAKPLTAET--YKQM-LKDGVKKAVAFSQYPHFSYSTTGSSINELWRQ 181
           +  P +P   +RY K +  E   Y  + + DG  +   F   P F  S    SI ++ R+
Sbjct: 116 DLVPDQPETVYRYRKRIDLEERPYAYVKISDGCDRGCTFCSIPSFKGSLRSRSIEDITRE 175

Query: 182 IKAL 185
           ++ L
Sbjct: 176 VEDL 179


>6BX3-K nrPDB
          Length = 417

 Score = 30.4 bits (67), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 9/79 (11%)

Query: 154 VKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSENI 213
           +K+A  F++   F+ ++   ++NE WR+    D+E   S   + +  TN+   +A  E+I
Sbjct: 162 IKQAKEFTKRRIFALNSHMDTMNEPWRE----DAENGPSRKKLKQETTNKEFQRALLEDI 217

Query: 214 TKKLQEFPQPVRDKVVLLF 232
                E+   VRD++ + +
Sbjct: 218 -----EYNDVVRDQIAIRY 231


>3OP6-A nrPDB
          Length = 152

 Score = 29.3 bits (64), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 6/47 (12%)

Query: 297 KVDGLMFIPIAFTSDHI------ETLHEIDLGVIGESEYKDKFKRCE 337
           K+DG + + +   SDHI      E +   DL +  ESE++ KF  C+
Sbjct: 50  KMDGRLAMVVLPASDHITFMKLKEAIGTSDLELATESEFEGKFAECD 96


>4TVE-A nrPDB
          Length = 278

 Score = 28.9 bits (63), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 13/77 (16%)

Query: 137 YAKPLTAETYKQMLKDGVKKAVAFSQYPHF-------------SYSTTGSSINELWRQIK 183
           + KPLT  T+   +K+G+     FS Y H              S+   GS +N    Q+ 
Sbjct: 19  FPKPLTGSTFDNEMKNGLHIVEFFSPYCHHCKSLAPIWEKTWESFHEEGSKLNITLSQVN 78

Query: 184 ALDSERSISWSVIDRWP 200
            ++     S   I+ +P
Sbjct: 79  CVEDGDLCSKENIEYFP 95


>4QLA-A nrPDB
          Length = 447

 Score = 28.5 bits (62), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 66/169 (39%), Gaps = 22/169 (13%)

Query: 160 FSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSENITKKLQE 219
            +QYPHF  +  G +I+ +    K       +   ++  WP   G ++ F E I      
Sbjct: 101 LNQYPHFKTNIQGLNIHFMRITPKVPKGVEIVPLLLLHGWP---GSVREFYEAIP----H 153

Query: 220 FPQPVRDK-VVLLFSAHSLPMDVVNTGDAYP----AEVAATVYNIMQKLKFKNPYRLV-- 272
                +D+   L   A SLP    +     P    AEVA    N+M +L +K  Y     
Sbjct: 154 LTAVSKDRNFALEIIAPSLPGYGFSDAAVRPGLAAAEVAVIFKNLMARLGYKQYYVQGGD 213

Query: 273 WQSQVG-------PKPWLGAQTAEIAEFLGPKVDGLMFIPIAFTSDHIE 314
           W + +G       PK  +G  +  +A  L P    L F+   F S  +E
Sbjct: 214 WGALIGSAMATFFPKEIIGFHS-NMALTLSPAATFLEFVGALFPSLIVE 261


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

1LBQ-A nrPDB                                                          614   e-176
3W1W-A nrPDB                                                          527   e-150
2C8J-A nrPDB                                                          412   e-115
1AK1-A nrPDB                                                          403   e-113

Sequences not found previously or not previously below threshold:

2GAS-A nrPDB                                                           37   0.014
5OAR-B nrPDB                                                           35   0.065
4CMR-A nrPDB                                                           32   0.39 
3L9X-A nrPDB                                                           32   0.56 
2YWI-A nrPDB                                                           31   1.1  
5WTZ-A nrPDB                                                           30   1.9  
3D31-A nrPDB                                                           30   2.1  
3L44-A nrPDB                                                           29   3.4  
6FK3-A nrPDB                                                           29   5.1  
6C43-A nrPDB                                                           28   6.1  


CONVERGED!
>1LBQ-A nrPDB
          Length = 362

 Score =  614 bits (1582), Expect = e-176,   Method: Composition-based stats.
 Identities = 362/362 (100%), Positives = 362/362 (100%)

Query: 32  NAQKRSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKI 91
           NAQKRSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKI
Sbjct: 1   NAQKRSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKI 60

Query: 92  EKQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLK 151
           EKQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLK
Sbjct: 61  EKQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLK 120

Query: 152 DGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSE 211
           DGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSE
Sbjct: 121 DGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSE 180

Query: 212 NITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRL 271
           NITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRL
Sbjct: 181 NITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRL 240

Query: 272 VWQSQVGPKPWLGAQTAEIAEFLGPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESEYKD 331
           VWQSQVGPKPWLGAQTAEIAEFLGPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESEYKD
Sbjct: 241 VWQSQVGPKPWLGAQTAEIAEFLGPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESEYKD 300

Query: 332 KFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLPLDFALGKSNDPVKDLSLVFGNHE 391
           KFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLPLDFALGKSNDPVKDLSLVFGNHE
Sbjct: 301 KFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLPLDFALGKSNDPVKDLSLVFGNHE 360

Query: 392 ST 393
           ST
Sbjct: 361 ST 362


>3W1W-A nrPDB
          Length = 371

 Score =  527 bits (1357), Expect = e-150,   Method: Composition-based stats.
 Identities = 176/345 (51%), Positives = 242/345 (70%), Gaps = 7/345 (2%)

Query: 34  QKRSP-TGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIE 92
           QKR P TGI+++NMGGP  + + +DFL +LF D DL+ +    Q  +A +IAK  TPKI+
Sbjct: 11  QKRKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPI--QNKLAPFIAKRLTPKIQ 68

Query: 93  KQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKD 152
           +QYR IGGGSPI+ W+  Q   + K+LD+  P TAPHK Y+ FRY  PLT E  ++M +D
Sbjct: 69  EQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERD 128

Query: 153 GVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSEN 212
           G+++A+AF+QYP +S STTGSS+N ++R    +  + ++ WS IDRWPT+  LI+ F+++
Sbjct: 129 GLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADH 188

Query: 213 ITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRLV 272
           I K+L  FP   R +VV+LFSAHSLPM VVN GD YP EV+ATV  +M++L++ NPYRLV
Sbjct: 189 ILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLV 248

Query: 273 WQSQVGPKPWLGAQTAEIAEFLGPK-VDGLMFIPIAFTSDHIETLHEIDLG---VIGESE 328
           WQS+VGP PWLG QT E  + L  +    ++ +PIAFTSDHIETL+E+D+    V+ +  
Sbjct: 249 WQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKEC 308

Query: 329 YKDKFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLPLDFAL 373
             +  +R ESLNGN  F + +ADLV SH+QSN+L S QL L   L
Sbjct: 309 GVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPL 353


>2C8J-A nrPDB
          Length = 311

 Score =  412 bits (1058), Expect = e-115,   Method: Composition-based stats.
 Identities = 84/334 (25%), Positives = 147/334 (44%), Gaps = 36/334 (10%)

Query: 36  RSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIE--- 92
           +   G+++M  G P K E+   +                       +I + R P  E   
Sbjct: 2   KKKIGLLVMAYGTPYKEEDIERYY---------------------THIRRGRKPSPEMLE 40

Query: 93  ---KQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQM 149
              ++YR IGG SP+   +  QA ++ K L++   E   H  Y+  ++ +P   +  K+M
Sbjct: 41  DLTERYRAIGGISPLATITLEQAKKLEKRLNEVQDEVEYHM-YLGLKHIEPFIEDAVKEM 99

Query: 150 LKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAF 209
             DG++ A+A    PH+S  +  S +     + + L +   ++   ID W      I+ +
Sbjct: 100 HNDGIQDAIALVLAPHYSTFSVKSYVGRAQEEAEKLGN---LTIHGIDSWYKEPKFIQYW 156

Query: 210 SENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPY 269
            + +           R+K VL+ SAHSLP  ++  GD YP ++  T   I +  +  N Y
Sbjct: 157 VDAVKSIYSGMSDAEREKAVLIVSAHSLPEKIIAMGDPYPDQLNETADYIARGAEVAN-Y 215

Query: 270 RLVWQSQVG-PKPWLGAQTAEIAEFLGPKVDGLMFI--PIAFTSDHIETLHEIDLGV-IG 325
            + WQS    P PW+G    ++   L  K     F+  P+ F ++H+E L++ D    + 
Sbjct: 216 AVGWQSAGNTPDPWIGPDVQDLTRELNEKYGYTSFVYAPVGFVAEHLEVLYDNDFECKVV 275

Query: 326 ESEYKDKFKRCESLNGNQTFIEGMADLVKSHLQS 359
             E   K+ R E  N +  FI+ + D+V    +S
Sbjct: 276 TDEIGAKYYRPEMPNASDAFIDCLTDVVVKKKES 309


>1AK1-A nrPDB
          Length = 310

 Score =  403 bits (1036), Expect = e-113,   Method: Composition-based stats.
 Identities = 77/332 (23%), Positives = 142/332 (42%), Gaps = 36/332 (10%)

Query: 36  RSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIE--- 92
           R   G+++M  G P K E+   +                       +I + R P+ E   
Sbjct: 3   RKKMGLLVMAYGTPYKEEDIERYY---------------------THIRRGRKPEPEMLQ 41

Query: 93  ---KQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQM 149
               +Y  IGG SP+ + +E QA  + + L++   E    K Y+  ++ +P   +   +M
Sbjct: 42  DLKDRYEAIGGISPLAQITEQQAHNLEQHLNEIQDEIT-FKAYIGLKHIEPFIEDAVAEM 100

Query: 150 LKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAF 209
            KDG+ +AV+    PHFS  +  S       + + L     ++ + ++ W      +  +
Sbjct: 101 HKDGITEAVSIVLAPHFSTFSVQSYNKRAKEEAEKLGG---LTITSVESWYDEPKFVTYW 157

Query: 210 SENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPY 269
            + + +     P+  R+  +L+ SAHSLP  +   GD YP ++  +   I +       Y
Sbjct: 158 VDRVKETYASMPEDERENAMLIVSAHSLPEKIKEFGDPYPDQLHESAKLIAEGAGVSE-Y 216

Query: 270 RLVWQSQVG-PKPWLGAQTAEIAE--FLGPKVDGLMFIPIAFTSDHIETLHEIDLGV-IG 325
            + WQS+   P PWLG    ++    F        +++P+ F +DH+E L++ D    + 
Sbjct: 217 AVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVGFVADHLEVLYDNDYECKVV 276

Query: 326 ESEYKDKFKRCESLNGNQTFIEGMADLVKSHL 357
             +    + R E  N    FI+ +A +V   L
Sbjct: 277 TDDIGASYYRPEMPNAKPEFIDALATVVLKKL 308


>2GAS-A nrPDB
          Length = 307

 Score = 37.0 bits (84), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 9/81 (11%)

Query: 104 IRKWSEYQATEVCK-------ILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKK 156
           I  W +     + K       +L      + PH   +A  +++ +  +   ++  D  K 
Sbjct: 227 IALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKGDAVYEI--DPAKD 284

Query: 157 AVAFSQYPHFSYSTTGSSINE 177
             A   YP  +Y+T    +N+
Sbjct: 285 IEASEAYPDVTYTTADEYLNQ 305


>5OAR-B nrPDB
          Length = 499

 Score = 34.7 bits (78), Expect = 0.065,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 9/78 (11%)

Query: 192 SWSVIDRWPTNEGLIKAFSENITKKLQEFPQPVR-----DKVVLLFSAHSLPMDVV---- 242
            W   D   T   L + + ++     Q + Q  R     D  +   +AH +P ++V    
Sbjct: 259 KWFAEDPSRTYHDLAQYWVDHAVPIFQNYSQERRLVMWEDIALSADNAHDVPKNIVMQSW 318

Query: 243 NTGDAYPAEVAATVYNIM 260
           N G  Y + + A  Y+++
Sbjct: 319 NNGLEYISNLTARGYDVI 336


>4CMR-A nrPDB
          Length = 597

 Score = 32.4 bits (72), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 31/103 (30%), Gaps = 20/103 (19%)

Query: 186 DSERSISWSVI--------DRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSL 237
                + W+ I         RW     + + +     K  +E  + VR  V+ +     +
Sbjct: 327 GRTSDMRWTGIRREDNVVIHRWYKERKVSQLWKFAFMKLFRELNRAVRFGVIDMLRTQGV 386

Query: 238 P--MDVVNTGDAYPA----------EVAATVYNIMQKLKFKNP 268
                +      Y            E+  +V  +M+ +   +P
Sbjct: 387 SDIEKIKEFLVRYSRVFFREHYEYFELDTSVDYVMEPIHEADP 429


>3L9X-A nrPDB
          Length = 413

 Score = 31.6 bits (70), Expect = 0.56,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 38/97 (39%), Gaps = 13/97 (13%)

Query: 122 TCPETAPHKPYVAFRYAKPLTAETYKQMLK-----DGVKKAVAFSQYPHFSYSTTGSSIN 176
             P  +     + + +  P  +   K+ML+     +GV+    +  YP F+         
Sbjct: 230 LVPRGSSGMILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNI-------- 281

Query: 177 ELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSENI 213
           ++  + +AL     I W    +W +   L+K + + +
Sbjct: 282 DIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKV 318


>2YWI-A nrPDB
          Length = 196

 Score = 30.9 bits (68), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 35/160 (21%)

Query: 209 FSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNP 268
           F +++  +L         K V   + +S      N  + YP +    +  + ++L +   
Sbjct: 60  FVKHVQHELVRLANDYMPKGVSFVAINS------NDAEQYPEDSPENMKKVAEELGY--- 110

Query: 269 YRLVWQSQVGPKPWLGAQTAEIAEFLGPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESE 328
                     P P+L  +T E+A+      D       A T D    + + DL  +   +
Sbjct: 111 ----------PFPYLYDETQEVAK----AYDA------ACTPDFY--IFDRDLKCVYRGQ 148

Query: 329 YKDKFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLP 368
             D   R    NG     E +   + + L+   +   Q P
Sbjct: 149 LDDS--RPN--NGIPVTGESIRAALDALLEGRPVPEKQKP 184


>5WTZ-A nrPDB
          Length = 421

 Score = 30.1 bits (66), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 31/65 (47%)

Query: 37  SPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIEKQYR 96
             TG+ ++ + G    +   D + QL  +ND+I  S   ++  A ++ +  + ++     
Sbjct: 189 KATGLSIVTIKGKQYAKVDADLIKQLNFENDVISASQWGEENYAPWLKELTSNELRDINN 248

Query: 97  EIGGG 101
            +GGG
Sbjct: 249 YLGGG 253


>3D31-A nrPDB
          Length = 348

 Score = 29.7 bits (65), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 4/103 (3%)

Query: 28  FNMQNAQKRSPTGIVLMNMGGPSKVEET-YDFLYQLFADNDLIPISAKYQKTIAKYIAKF 86
           F   N +K    G+ +  +  P +V +T  D   +   D + + +S   Q+ +A   A  
Sbjct: 84  FPHMNVKKNLEFGMRMKKIKDPKRVLDTARDLKIEHLLDRNPLTLSGGEQQRVALARALV 143

Query: 87  RTPKIEKQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPH 129
             PKI      +    P    ++  A E+  +L K    T  H
Sbjct: 144 TNPKILLLDEPLSALDPR---TQENAREMLSVLHKKNKLTVLH 183


>3L44-A nrPDB
          Length = 434

 Score = 28.9 bits (63), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 1/65 (1%)

Query: 90  KIEKQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQM 149
              + ++ +GGG+PI       A       +K     A + P +   +A P   +     
Sbjct: 25  SPSRSFKAVGGGAPIAMERGKGAYFWDVDGNKYIDYLAAYGPIIT-GHAHPHITKAITTA 83

Query: 150 LKDGV 154
            ++GV
Sbjct: 84  AENGV 88


>6FK3-A nrPDB
          Length = 536

 Score = 28.5 bits (62), Expect = 5.1,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 4/56 (7%)

Query: 141 LTAE----TYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSIS 192
            T E    T   +  DG+++A+A +    +  S+   + +  W  +  +     ++
Sbjct: 407 FTEEVFGPTINLVKVDGIEEAIAVANSTPYGLSSAIYTNHRHWAYLFKVGIRAGMT 462


>6C43-A nrPDB
          Length = 477

 Score = 28.2 bits (61), Expect = 6.1,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 6/67 (8%)

Query: 38  PTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIEKQYRE 97
           P G++ +  G    V +       L     +  +S        ++I +   P I++ + E
Sbjct: 196 PPGVLNVLFGRGQTVGDV------LTGHEKVRMVSLTGSIATGEHILRHTAPAIKRTHME 249

Query: 98  IGGGSPI 104
           +GG +P+
Sbjct: 250 LGGKAPV 256


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.306    0.129    0.348 

Lambda     K      H
   0.267   0.0402    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,644,836
Number of Sequences: 36641
Number of extensions: 578014
Number of successful extensions: 1644
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1605
Number of HSP's gapped (non-prelim): 30
length of query: 393
length of database: 10,336,785
effective HSP length: 99
effective length of query: 294
effective length of database: 6,709,326
effective search space: 1972541844
effective search space used: 1972541844
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 60 (27.8 bits)