BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P16622 (393 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1LBQ-A nrPDB 757 0.0 3W1W-A nrPDB 339 1e-93 2C8J-A nrPDB 109 2e-24 1AK1-A nrPDB 99 3e-21 4JC0-A nrPDB 32 0.36 6BX3-K nrPDB 30 1.5 3OP6-A nrPDB 29 3.0 4TVE-A nrPDB 29 4.1 4QLA-A nrPDB 28 5.9 >1LBQ-A nrPDB Length = 362 Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/362 (100%), Positives = 362/362 (100%) Query: 32 NAQKRSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKI 91 NAQKRSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKI Sbjct: 1 NAQKRSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKI 60 Query: 92 EKQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLK 151 EKQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLK Sbjct: 61 EKQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLK 120 Query: 152 DGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSE 211 DGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSE Sbjct: 121 DGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSE 180 Query: 212 NITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRL 271 NITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRL Sbjct: 181 NITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRL 240 Query: 272 VWQSQVGPKPWLGAQTAEIAEFLGPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESEYKD 331 VWQSQVGPKPWLGAQTAEIAEFLGPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESEYKD Sbjct: 241 VWQSQVGPKPWLGAQTAEIAEFLGPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESEYKD 300 Query: 332 KFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLPLDFALGKSNDPVKDLSLVFGNHE 391 KFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLPLDFALGKSNDPVKDLSLVFGNHE Sbjct: 301 KFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLPLDFALGKSNDPVKDLSLVFGNHE 360 Query: 392 ST 393 ST Sbjct: 361 ST 362 >3W1W-A nrPDB Length = 371 Score = 339 bits (870), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 176/345 (51%), Positives = 242/345 (70%), Gaps = 7/345 (2%) Query: 34 QKRSP-TGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIE 92 QKR P TGI+++NMGGP + + +DFL +LF D DL+ + Q +A +IAK TPKI+ Sbjct: 11 QKRKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPI--QNKLAPFIAKRLTPKIQ 68 Query: 93 KQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKD 152 +QYR IGGGSPI+ W+ Q + K+LD+ P TAPHK Y+ FRY PLT E ++M +D Sbjct: 69 EQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERD 128 Query: 153 GVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSEN 212 G+++A+AF+QYP +S STTGSS+N ++R + + ++ WS IDRWPT+ LI+ F+++ Sbjct: 129 GLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADH 188 Query: 213 ITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRLV 272 I K+L FP R +VV+LFSAHSLPM VVN GD YP EV+ATV +M++L++ NPYRLV Sbjct: 189 ILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLV 248 Query: 273 WQSQVGPKPWLGAQTAEIAEFLGPK-VDGLMFIPIAFTSDHIETLHEIDL---GVIGESE 328 WQS+VGP PWLG QT E + L + ++ +PIAFTSDHIETL+E+D+ V+ + Sbjct: 249 WQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKEC 308 Query: 329 YKDKFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLPLDFAL 373 + +R ESLNGN F + +ADLV SH+QSN+L S QL L L Sbjct: 309 GVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPL 353 >2C8J-A nrPDB Length = 311 Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 77/282 (27%), Positives = 133/282 (47%), Gaps = 15/282 (5%) Query: 82 YIAKFRTPKIE------KQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAF 135 +I + R P E ++YR IGG SP+ + QA ++ K L++ E H Y+ Sbjct: 27 HIRRGRKPSPEMLEDLTERYRAIGGISPLATITLEQAKKLEKRLNEVQDEVEYHM-YLGL 85 Query: 136 RYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSV 195 ++ +P + K+M DG++ A+A PH+S + S + + + L + ++ Sbjct: 86 KHIEPFIEDAVKEMHNDGIQDAIALVLAPHYSTFSVKSYVGRAQEEAEKLGN---LTIHG 142 Query: 196 IDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAAT 255 ID W I+ + + + R+K VL+ SAHSLP ++ GD YP ++ T Sbjct: 143 IDSWYKEPKFIQYWVDAVKSIYSGMSDAEREKAVLIVSAHSLPEKIIAMGDPYPDQLNET 202 Query: 256 VYNIMQKLKFKNPYRLVWQSQVG-PKPWLGAQTAEIAEFLGPKVDGLMFI--PIAFTSDH 312 I + + N Y + WQS P PW+G ++ L K F+ P+ F ++H Sbjct: 203 ADYIARGAEVAN-YAVGWQSAGNTPDPWIGPDVQDLTRELNEKYGYTSFVYAPVGFVAEH 261 Query: 313 IETLHEIDLGV-IGESEYKDKFKRCESLNGNQTFIEGMADLV 353 +E L++ D + E K+ R E N + FI+ + D+V Sbjct: 262 LEVLYDNDFECKVVTDEIGAKYYRPEMPNASDAFIDCLTDVV 303 >1AK1-A nrPDB Length = 310 Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 73/291 (25%), Positives = 132/291 (45%), Gaps = 25/291 (8%) Query: 82 YIAKFRTPK------IEKQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAF 135 +I + R P+ ++ +Y IGG SP+ + +E QA + + L++ E K Y+ Sbjct: 28 HIRRGRKPEPEMLQDLKDRYEAIGGISPLAQITEQQAHNLEQHLNEIQDEIT-FKAYIGL 86 Query: 136 RYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSV 195 ++ +P + +M KDG+ +AV+ PHFS + S + + L ++ + Sbjct: 87 KHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYNKRAKEEAEKLGG---LTITS 143 Query: 196 IDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAAT 255 ++ W + + + + + P+ R+ +L+ SAHSLP + GD YP ++ + Sbjct: 144 VESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIKEFGDPYPDQLHES 203 Query: 256 VYNIMQKLKFKNPYRLVWQSQVG-PKPWLGAQTAEIAE--FLGPKVDGLMFIPIAFTSDH 312 I + Y + WQS+ P PWLG ++ F +++P+ F +DH Sbjct: 204 AKLIAEGAGVSE-YAVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVGFVADH 262 Query: 313 IETLHEIDLGV------IGESEYKDKFKRCESLNGNQTFIEGMADLVKSHL 357 +E L++ D IG S Y R E N FI+ +A +V L Sbjct: 263 LEVLYDNDYECKVVTDDIGASYY-----RPEMPNAKPEFIDALATVVLKKL 308 >4JC0-A nrPDB Length = 438 Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust. Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Query: 125 ETAPHKPYVAFRYAKPLTAET--YKQM-LKDGVKKAVAFSQYPHFSYSTTGSSINELWRQ 181 + P +P +RY K + E Y + + DG + F P F S SI ++ R+ Sbjct: 116 DLVPDQPETVYRYRKRIDLEERPYAYVKISDGCDRGCTFCSIPSFKGSLRSRSIEDITRE 175 Query: 182 IKAL 185 ++ L Sbjct: 176 VEDL 179 >6BX3-K nrPDB Length = 417 Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 9/79 (11%) Query: 154 VKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSENI 213 +K+A F++ F+ ++ ++NE WR+ D+E S + + TN+ +A E+I Sbjct: 162 IKQAKEFTKRRIFALNSHMDTMNEPWRE----DAENGPSRKKLKQETTNKEFQRALLEDI 217 Query: 214 TKKLQEFPQPVRDKVVLLF 232 E+ VRD++ + + Sbjct: 218 -----EYNDVVRDQIAIRY 231 >3OP6-A nrPDB Length = 152 Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 6/47 (12%) Query: 297 KVDGLMFIPIAFTSDHI------ETLHEIDLGVIGESEYKDKFKRCE 337 K+DG + + + SDHI E + DL + ESE++ KF C+ Sbjct: 50 KMDGRLAMVVLPASDHITFMKLKEAIGTSDLELATESEFEGKFAECD 96 >4TVE-A nrPDB Length = 278 Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust. Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 13/77 (16%) Query: 137 YAKPLTAETYKQMLKDGVKKAVAFSQYPHF-------------SYSTTGSSINELWRQIK 183 + KPLT T+ +K+G+ FS Y H S+ GS +N Q+ Sbjct: 19 FPKPLTGSTFDNEMKNGLHIVEFFSPYCHHCKSLAPIWEKTWESFHEEGSKLNITLSQVN 78 Query: 184 ALDSERSISWSVIDRWP 200 ++ S I+ +P Sbjct: 79 CVEDGDLCSKENIEYFP 95 >4QLA-A nrPDB Length = 447 Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 66/169 (39%), Gaps = 22/169 (13%) Query: 160 FSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSENITKKLQE 219 +QYPHF + G +I+ + K + ++ WP G ++ F E I Sbjct: 101 LNQYPHFKTNIQGLNIHFMRITPKVPKGVEIVPLLLLHGWP---GSVREFYEAIP----H 153 Query: 220 FPQPVRDK-VVLLFSAHSLPMDVVNTGDAYP----AEVAATVYNIMQKLKFKNPYRLV-- 272 +D+ L A SLP + P AEVA N+M +L +K Y Sbjct: 154 LTAVSKDRNFALEIIAPSLPGYGFSDAAVRPGLAAAEVAVIFKNLMARLGYKQYYVQGGD 213 Query: 273 WQSQVG-------PKPWLGAQTAEIAEFLGPKVDGLMFIPIAFTSDHIE 314 W + +G PK +G + +A L P L F+ F S +E Sbjct: 214 WGALIGSAMATFFPKEIIGFHS-NMALTLSPAATFLEFVGALFPSLIVE 261 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1LBQ-A nrPDB 614 e-176 3W1W-A nrPDB 527 e-150 2C8J-A nrPDB 412 e-115 1AK1-A nrPDB 403 e-113 Sequences not found previously or not previously below threshold: 2GAS-A nrPDB 37 0.014 5OAR-B nrPDB 35 0.065 4CMR-A nrPDB 32 0.39 3L9X-A nrPDB 32 0.56 2YWI-A nrPDB 31 1.1 5WTZ-A nrPDB 30 1.9 3D31-A nrPDB 30 2.1 3L44-A nrPDB 29 3.4 6FK3-A nrPDB 29 5.1 6C43-A nrPDB 28 6.1 CONVERGED! >1LBQ-A nrPDB Length = 362 Score = 614 bits (1582), Expect = e-176, Method: Composition-based stats. Identities = 362/362 (100%), Positives = 362/362 (100%) Query: 32 NAQKRSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKI 91 NAQKRSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKI Sbjct: 1 NAQKRSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKI 60 Query: 92 EKQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLK 151 EKQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLK Sbjct: 61 EKQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLK 120 Query: 152 DGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSE 211 DGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSE Sbjct: 121 DGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSE 180 Query: 212 NITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRL 271 NITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRL Sbjct: 181 NITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRL 240 Query: 272 VWQSQVGPKPWLGAQTAEIAEFLGPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESEYKD 331 VWQSQVGPKPWLGAQTAEIAEFLGPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESEYKD Sbjct: 241 VWQSQVGPKPWLGAQTAEIAEFLGPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESEYKD 300 Query: 332 KFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLPLDFALGKSNDPVKDLSLVFGNHE 391 KFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLPLDFALGKSNDPVKDLSLVFGNHE Sbjct: 301 KFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLPLDFALGKSNDPVKDLSLVFGNHE 360 Query: 392 ST 393 ST Sbjct: 361 ST 362 >3W1W-A nrPDB Length = 371 Score = 527 bits (1357), Expect = e-150, Method: Composition-based stats. Identities = 176/345 (51%), Positives = 242/345 (70%), Gaps = 7/345 (2%) Query: 34 QKRSP-TGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIE 92 QKR P TGI+++NMGGP + + +DFL +LF D DL+ + Q +A +IAK TPKI+ Sbjct: 11 QKRKPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPI--QNKLAPFIAKRLTPKIQ 68 Query: 93 KQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKD 152 +QYR IGGGSPI+ W+ Q + K+LD+ P TAPHK Y+ FRY PLT E ++M +D Sbjct: 69 EQYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERD 128 Query: 153 GVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSEN 212 G+++A+AF+QYP +S STTGSS+N ++R + + ++ WS IDRWPT+ LI+ F+++ Sbjct: 129 GLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADH 188 Query: 213 ITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPYRLV 272 I K+L FP R +VV+LFSAHSLPM VVN GD YP EV+ATV +M++L++ NPYRLV Sbjct: 189 ILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLV 248 Query: 273 WQSQVGPKPWLGAQTAEIAEFLGPK-VDGLMFIPIAFTSDHIETLHEIDLG---VIGESE 328 WQS+VGP PWLG QT E + L + ++ +PIAFTSDHIETL+E+D+ V+ + Sbjct: 249 WQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKEC 308 Query: 329 YKDKFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLPLDFAL 373 + +R ESLNGN F + +ADLV SH+QSN+L S QL L L Sbjct: 309 GVENIRRAESLNGNPLFSKALADLVHSHIQSNELCSKQLTLSCPL 353 >2C8J-A nrPDB Length = 311 Score = 412 bits (1058), Expect = e-115, Method: Composition-based stats. Identities = 84/334 (25%), Positives = 147/334 (44%), Gaps = 36/334 (10%) Query: 36 RSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIE--- 92 + G+++M G P K E+ + +I + R P E Sbjct: 2 KKKIGLLVMAYGTPYKEEDIERYY---------------------THIRRGRKPSPEMLE 40 Query: 93 ---KQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQM 149 ++YR IGG SP+ + QA ++ K L++ E H Y+ ++ +P + K+M Sbjct: 41 DLTERYRAIGGISPLATITLEQAKKLEKRLNEVQDEVEYHM-YLGLKHIEPFIEDAVKEM 99 Query: 150 LKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAF 209 DG++ A+A PH+S + S + + + L + ++ ID W I+ + Sbjct: 100 HNDGIQDAIALVLAPHYSTFSVKSYVGRAQEEAEKLGN---LTIHGIDSWYKEPKFIQYW 156 Query: 210 SENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPY 269 + + R+K VL+ SAHSLP ++ GD YP ++ T I + + N Y Sbjct: 157 VDAVKSIYSGMSDAEREKAVLIVSAHSLPEKIIAMGDPYPDQLNETADYIARGAEVAN-Y 215 Query: 270 RLVWQSQVG-PKPWLGAQTAEIAEFLGPKVDGLMFI--PIAFTSDHIETLHEIDLGV-IG 325 + WQS P PW+G ++ L K F+ P+ F ++H+E L++ D + Sbjct: 216 AVGWQSAGNTPDPWIGPDVQDLTRELNEKYGYTSFVYAPVGFVAEHLEVLYDNDFECKVV 275 Query: 326 ESEYKDKFKRCESLNGNQTFIEGMADLVKSHLQS 359 E K+ R E N + FI+ + D+V +S Sbjct: 276 TDEIGAKYYRPEMPNASDAFIDCLTDVVVKKKES 309 >1AK1-A nrPDB Length = 310 Score = 403 bits (1036), Expect = e-113, Method: Composition-based stats. Identities = 77/332 (23%), Positives = 142/332 (42%), Gaps = 36/332 (10%) Query: 36 RSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIE--- 92 R G+++M G P K E+ + +I + R P+ E Sbjct: 3 RKKMGLLVMAYGTPYKEEDIERYY---------------------THIRRGRKPEPEMLQ 41 Query: 93 ---KQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQM 149 +Y IGG SP+ + +E QA + + L++ E K Y+ ++ +P + +M Sbjct: 42 DLKDRYEAIGGISPLAQITEQQAHNLEQHLNEIQDEIT-FKAYIGLKHIEPFIEDAVAEM 100 Query: 150 LKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAF 209 KDG+ +AV+ PHFS + S + + L ++ + ++ W + + Sbjct: 101 HKDGITEAVSIVLAPHFSTFSVQSYNKRAKEEAEKLGG---LTITSVESWYDEPKFVTYW 157 Query: 210 SENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNPY 269 + + + P+ R+ +L+ SAHSLP + GD YP ++ + I + Y Sbjct: 158 VDRVKETYASMPEDERENAMLIVSAHSLPEKIKEFGDPYPDQLHESAKLIAEGAGVSE-Y 216 Query: 270 RLVWQSQVG-PKPWLGAQTAEIAE--FLGPKVDGLMFIPIAFTSDHIETLHEIDLGV-IG 325 + WQS+ P PWLG ++ F +++P+ F +DH+E L++ D + Sbjct: 217 AVGWQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVGFVADHLEVLYDNDYECKVV 276 Query: 326 ESEYKDKFKRCESLNGNQTFIEGMADLVKSHL 357 + + R E N FI+ +A +V L Sbjct: 277 TDDIGASYYRPEMPNAKPEFIDALATVVLKKL 308 >2GAS-A nrPDB Length = 307 Score = 37.0 bits (84), Expect = 0.014, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 9/81 (11%) Query: 104 IRKWSEYQATEVCK-------ILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKK 156 I W + + K +L + PH +A +++ + + ++ D K Sbjct: 227 IALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKGDAVYEI--DPAKD 284 Query: 157 AVAFSQYPHFSYSTTGSSINE 177 A YP +Y+T +N+ Sbjct: 285 IEASEAYPDVTYTTADEYLNQ 305 >5OAR-B nrPDB Length = 499 Score = 34.7 bits (78), Expect = 0.065, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 9/78 (11%) Query: 192 SWSVIDRWPTNEGLIKAFSENITKKLQEFPQPVR-----DKVVLLFSAHSLPMDVV---- 242 W D T L + + ++ Q + Q R D + +AH +P ++V Sbjct: 259 KWFAEDPSRTYHDLAQYWVDHAVPIFQNYSQERRLVMWEDIALSADNAHDVPKNIVMQSW 318 Query: 243 NTGDAYPAEVAATVYNIM 260 N G Y + + A Y+++ Sbjct: 319 NNGLEYISNLTARGYDVI 336 >4CMR-A nrPDB Length = 597 Score = 32.4 bits (72), Expect = 0.39, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 31/103 (30%), Gaps = 20/103 (19%) Query: 186 DSERSISWSVI--------DRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSL 237 + W+ I RW + + + K +E + VR V+ + + Sbjct: 327 GRTSDMRWTGIRREDNVVIHRWYKERKVSQLWKFAFMKLFRELNRAVRFGVIDMLRTQGV 386 Query: 238 P--MDVVNTGDAYPA----------EVAATVYNIMQKLKFKNP 268 + Y E+ +V +M+ + +P Sbjct: 387 SDIEKIKEFLVRYSRVFFREHYEYFELDTSVDYVMEPIHEADP 429 >3L9X-A nrPDB Length = 413 Score = 31.6 bits (70), Expect = 0.56, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 38/97 (39%), Gaps = 13/97 (13%) Query: 122 TCPETAPHKPYVAFRYAKPLTAETYKQMLK-----DGVKKAVAFSQYPHFSYSTTGSSIN 176 P + + + + P + K+ML+ +GV+ + YP F+ Sbjct: 230 LVPRGSSGMILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNI-------- 281 Query: 177 ELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSENI 213 ++ + +AL I W +W + L+K + + + Sbjct: 282 DIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKV 318 >2YWI-A nrPDB Length = 196 Score = 30.9 bits (68), Expect = 1.1, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 35/160 (21%) Query: 209 FSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGDAYPAEVAATVYNIMQKLKFKNP 268 F +++ +L K V + +S N + YP + + + ++L + Sbjct: 60 FVKHVQHELVRLANDYMPKGVSFVAINS------NDAEQYPEDSPENMKKVAEELGY--- 110 Query: 269 YRLVWQSQVGPKPWLGAQTAEIAEFLGPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESE 328 P P+L +T E+A+ D A T D + + DL + + Sbjct: 111 ----------PFPYLYDETQEVAK----AYDA------ACTPDFY--IFDRDLKCVYRGQ 148 Query: 329 YKDKFKRCESLNGNQTFIEGMADLVKSHLQSNQLYSNQLP 368 D R NG E + + + L+ + Q P Sbjct: 149 LDDS--RPN--NGIPVTGESIRAALDALLEGRPVPEKQKP 184 >5WTZ-A nrPDB Length = 421 Score = 30.1 bits (66), Expect = 1.9, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 31/65 (47%) Query: 37 SPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIEKQYR 96 TG+ ++ + G + D + QL +ND+I S ++ A ++ + + ++ Sbjct: 189 KATGLSIVTIKGKQYAKVDADLIKQLNFENDVISASQWGEENYAPWLKELTSNELRDINN 248 Query: 97 EIGGG 101 +GGG Sbjct: 249 YLGGG 253 >3D31-A nrPDB Length = 348 Score = 29.7 bits (65), Expect = 2.1, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 4/103 (3%) Query: 28 FNMQNAQKRSPTGIVLMNMGGPSKVEET-YDFLYQLFADNDLIPISAKYQKTIAKYIAKF 86 F N +K G+ + + P +V +T D + D + + +S Q+ +A A Sbjct: 84 FPHMNVKKNLEFGMRMKKIKDPKRVLDTARDLKIEHLLDRNPLTLSGGEQQRVALARALV 143 Query: 87 RTPKIEKQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPH 129 PKI + P ++ A E+ +L K T H Sbjct: 144 TNPKILLLDEPLSALDPR---TQENAREMLSVLHKKNKLTVLH 183 >3L44-A nrPDB Length = 434 Score = 28.9 bits (63), Expect = 3.4, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 1/65 (1%) Query: 90 KIEKQYREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQM 149 + ++ +GGG+PI A +K A + P + +A P + Sbjct: 25 SPSRSFKAVGGGAPIAMERGKGAYFWDVDGNKYIDYLAAYGPIIT-GHAHPHITKAITTA 83 Query: 150 LKDGV 154 ++GV Sbjct: 84 AENGV 88 >6FK3-A nrPDB Length = 536 Score = 28.5 bits (62), Expect = 5.1, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 4/56 (7%) Query: 141 LTAE----TYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSIS 192 T E T + DG+++A+A + + S+ + + W + + ++ Sbjct: 407 FTEEVFGPTINLVKVDGIEEAIAVANSTPYGLSSAIYTNHRHWAYLFKVGIRAGMT 462 >6C43-A nrPDB Length = 477 Score = 28.2 bits (61), Expect = 6.1, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 6/67 (8%) Query: 38 PTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQKTIAKYIAKFRTPKIEKQYRE 97 P G++ + G V + L + +S ++I + P I++ + E Sbjct: 196 PPGVLNVLFGRGQTVGDV------LTGHEKVRMVSLTGSIATGEHILRHTAPAIKRTHME 249 Query: 98 IGGGSPI 104 +GG +P+ Sbjct: 250 LGGKAPV 256 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.306 0.129 0.348 Lambda K H 0.267 0.0402 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,644,836 Number of Sequences: 36641 Number of extensions: 578014 Number of successful extensions: 1644 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 1605 Number of HSP's gapped (non-prelim): 30 length of query: 393 length of database: 10,336,785 effective HSP length: 99 effective length of query: 294 effective length of database: 6,709,326 effective search space: 1972541844 effective search space used: 1972541844 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 60 (27.8 bits)