BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P16298 (524 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4ORC-A nrPDB 1093 0.0 4ORB-A nrPDB 890 0.0 4IL1-A nrPDB 885 0.0 3V4Y-A nrPDB 222 3e-58 5W0W-C nrPDB 221 9e-58 1S70-A nrPDB 218 4e-57 4ZVZ-A nrPDB 218 5e-57 4JA9-A nrPDB 215 4e-56 5JJT-A nrPDB 213 2e-55 3ICF-A nrPDB 202 4e-52 5JPE-A nrPDB 201 4e-52 2F2P-A nrPDB 47 1e-05 1G5B-A nrPDB 39 0.006 2LHI-A nrPDB 37 0.024 5UQE-A nrPDB 33 0.30 5W2J-A nrPDB 33 0.30 3SS3-A nrPDB 33 0.31 5WJ6-A nrPDB 33 0.38 5JYO-D nrPDB 32 0.54 5VJW-A nrPDB 32 0.69 1YQX-A nrPDB 32 0.98 2NUX-A nrPDB 30 3.5 2GOJ-A nrPDB 29 5.0 >4ORC-A nrPDB Length = 544 Score = 1093 bits (2827), Expect = 0.0, Method: Compositional matrix adjust. Identities = 524/524 (100%), Positives = 524/524 (100%) Query: 1 MAAPEPARAAPPPPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDLDGIPRVDVLKNHLV 60 MAAPEPARAAPPPPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDLDGIPRVDVLKNHLV Sbjct: 21 MAAPEPARAAPPPPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDLDGIPRVDVLKNHLV 80 Query: 61 KEGRVDEEIALRIINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANT 120 KEGRVDEEIALRIINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANT Sbjct: 81 KEGRVDEEIALRIINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANT 140 Query: 121 RYLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYS 180 RYLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYS Sbjct: 141 RYLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYS 200 Query: 181 ERVYEACMEAFDSLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLL 240 ERVYEACMEAFDSLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLL Sbjct: 201 ERVYEACMEAFDSLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLL 260 Query: 241 WSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMY 300 WSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMY Sbjct: 261 WSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMY 320 Query: 301 RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFT 360 RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFT Sbjct: 321 RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFT 380 Query: 361 WSLPFVGEKVTEMLVNVLSICSDDELMTEGEDQFDGSAAARKEIIRNKIRAIGKMARVFS 420 WSLPFVGEKVTEMLVNVLSICSDDELMTEGEDQFDGSAAARKEIIRNKIRAIGKMARVFS Sbjct: 381 WSLPFVGEKVTEMLVNVLSICSDDELMTEGEDQFDGSAAARKEIIRNKIRAIGKMARVFS 440 Query: 421 VLREESESVLTLKGLTPTGMLPSGVLAGGRQTLQSATVEAIEAEKAIRGFSPPHRICSFE 480 VLREESESVLTLKGLTPTGMLPSGVLAGGRQTLQSATVEAIEAEKAIRGFSPPHRICSFE Sbjct: 441 VLREESESVLTLKGLTPTGMLPSGVLAGGRQTLQSATVEAIEAEKAIRGFSPPHRICSFE 500 Query: 481 EAKGLDRINERMPPRKDAVQQDGFNSLNTAHATENHGTGNHTAQ 524 EAKGLDRINERMPPRKDAVQQDGFNSLNTAHATENHGTGNHTAQ Sbjct: 501 EAKGLDRINERMPPRKDAVQQDGFNSLNTAHATENHGTGNHTAQ 544 >4ORB-A nrPDB Length = 519 Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust. Identities = 423/511 (82%), Positives = 467/511 (91%), Gaps = 13/511 (2%) Query: 13 PPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDLDGIPRVDVLKNHLVKEGRVDEEIALR 72 P P DRVVKAVPFPP+HRLT++EVFD DG PRVD+LK HL+KEGR++E +ALR Sbjct: 4 PKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEESVALR 63 Query: 73 IINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 132 II EGA+ILR+EK +++++AP+TVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG Sbjct: 64 IITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 123 Query: 133 YFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFD 192 YFSIECVLYLW LKILYP TLFLLRGNHECRHLTEYFTFKQECKIKYSERVY+ACM+AFD Sbjct: 124 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFD 183 Query: 193 SLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEK 252 LPLAAL+NQQFLCVHGGLSPEI+TLDDIR+LDRFKEPPA+GPMCD+LWSDP EDFGNEK Sbjct: 184 CLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEK 243 Query: 253 SQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLI 312 +QEHF+HNTVRGCSYFY+YPAVC+FLQ+NNLLSI+RAHEAQDAGYRMYRKSQTTGFPSLI Sbjct: 244 TQEHFTHNTVRGCSYFYSYPAVCDFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLI 303 Query: 313 TIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTE 372 TIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTE Sbjct: 304 TIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTE 363 Query: 373 MLVNVLSICSDDELMTEGEDQFDG-SAAARKEIIRNKIRAIGKMARVFSVLREESESVLT 431 MLVNVL+ICSDDEL +E ED FDG +AAARKE+IRNKIRAIGKMARVFSVLREESESVLT Sbjct: 364 MLVNVLNICSDDELGSE-EDGFDGATAAARKEVIRNKIRAIGKMARVFSVLREESESVLT 422 Query: 432 LKGLTPTGMLPSGVLAGGRQTLQSATVEAIEAEKAIRGFSPPHRICSFEEAKGLDRINER 491 LKGLTPTGMLPSGVL+GG+QTLQS AI+GFSP H+I SFEEAKGLDRINER Sbjct: 423 LKGLTPTGMLPSGVLSGGKQTLQS----------AIKGFSPQHKITSFEEAKGLDRINER 472 Query: 492 MPPRKDAVQQDG-FNSLNTAHATENHGTGNH 521 MPPR+DA+ D NS+N A A+E +GT ++ Sbjct: 473 MPPRRDAMPSDANLNSINKALASETNGTDSN 503 >4IL1-A nrPDB Length = 823 Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/488 (84%), Positives = 453/488 (92%), Gaps = 12/488 (2%) Query: 13 PPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDLDGIPRVDVLKNHLVKEGRVDEEIALR 72 P P DRVVKAVPFPP+HRLT++EVFD DG PRVD+LK HL+KEGR++E +ALR Sbjct: 337 PKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEESVALR 396 Query: 73 IINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 132 II EGA+ILR+EK +++++AP+TVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG Sbjct: 397 IITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 456 Query: 133 YFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFD 192 YFSIECVLYLW LKILYP TLFLLRGNHECRHLTEYFTFKQECKIKYSERVY+ACM+AFD Sbjct: 457 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFD 516 Query: 193 SLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEK 252 LPLAAL+NQQFLCVHGGLSPEI+TLDDIR+LDRFKEPPA+GPMCD+LWSDP EDFGNEK Sbjct: 517 CLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEK 576 Query: 253 SQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLI 312 +QEHF+HNTVRGCSYFY+YPAVC+FLQ+NNLLSI+RAHEAQDAGYRMYRKSQTTGFPSLI Sbjct: 577 TQEHFTHNTVRGCSYFYSYPAVCDFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLI 636 Query: 313 TIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTE 372 TIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTE Sbjct: 637 TIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTE 696 Query: 373 MLVNVLSICSDDELMTEGEDQFDG-SAAARKEIIRNKIRAIGKMARVFSVLREESESVLT 431 MLVNVL+ICSDDEL +E ED FDG +AAARKE+IRNKIRAIGKMARVFSVLREESESVLT Sbjct: 697 MLVNVLNICSDDELGSE-EDGFDGATAAARKEVIRNKIRAIGKMARVFSVLREESESVLT 755 Query: 432 LKGLTPTGMLPSGVLAGGRQTLQSATVEAIEAEKAIRGFSPPHRICSFEEAKGLDRINER 491 LKGLTPTGMLPSGVL+GG+QTLQS AI+GFSP H+I SFEEAKGLDRINER Sbjct: 756 LKGLTPTGMLPSGVLSGGKQTLQS----------AIKGFSPQHKITSFEEAKGLDRINER 805 Query: 492 MPPRKDAV 499 MPPR+DA+ Sbjct: 806 MPPRRDAM 813 >3V4Y-A nrPDB Length = 306 Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 106/259 (40%), Positives = 162/259 (62%), Gaps = 13/259 (5%) Query: 80 ILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECV 139 I + ++E+EAP+ +CGDIHGQ++DL++LFE GG P + YLFLGDYVDRG S+E + Sbjct: 44 IFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETI 103 Query: 140 LYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFDSLPLAAL 199 L KI YP FLLRGNHEC + + F ECK +Y+ ++++ + F+ LP+AA+ Sbjct: 104 CLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAI 163 Query: 200 LNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSH 259 ++++ C HGGLSP++ +++ IRR+ R + P G +CDLLWSDP +D + + Sbjct: 164 VDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDV------QGWGE 217 Query: 260 NTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPN 319 N RG S+ + V +FL ++L I RAH+ + GY + K Q L+T+FSAPN Sbjct: 218 ND-RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQ------LVTLFSAPN 270 Query: 320 YLDVYNNKAAVLKYENNVM 338 Y ++N A++ + +M Sbjct: 271 YCGEFDNAGAMMSVDETLM 289 >5W0W-C nrPDB Length = 311 Score = 221 bits (562), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 120/286 (41%), Positives = 164/286 (57%), Gaps = 16/286 (5%) Query: 64 RVDEEIALRIINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYL 123 ++ E + + IL +E + EV P+TVCGD+HGQF DLM+LF +GG +T YL Sbjct: 24 QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 83 Query: 124 FLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSE-R 182 F+GDYVDRGY+S+E V L LK+ Y + +LRGNHE R +T+ + F EC KY Sbjct: 84 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAN 143 Query: 183 VYEACMEAFDSLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWS 242 V++ + FD LPL AL++ Q C+HGGLSP I TLD IR LDR +E P GPMCDLLWS Sbjct: 144 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 203 Query: 243 DPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRK 302 DP + G S RG Y + F N L + RAH+ GY Sbjct: 204 DPDDRGGWGISP--------RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHD 255 Query: 303 SQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSP 347 +++TIFSAPNY N+AA+++ ++ + + QF+ +P Sbjct: 256 R------NVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAP 295 >1S70-A nrPDB Length = 330 Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 104/259 (40%), Positives = 159/259 (61%), Gaps = 13/259 (5%) Query: 80 ILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECV 139 I + ++E+EAP+ +CGDIHGQ+ DL++LFE GG P YLFLGDYVDRG S+E + Sbjct: 47 IFLSQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETI 106 Query: 140 LYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFDSLPLAAL 199 L KI YP FLLRGNHEC + + F ECK +++ ++++ + F+ LP+AA+ Sbjct: 107 CLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAI 166 Query: 200 LNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSH 259 ++++ C HGGLSP++ +++ IRR+ R + P G +CDLLWSDP +D + + Sbjct: 167 VDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDV------QGWGE 220 Query: 260 NTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPN 319 N RG S+ + V +FL ++L I RAH+ + GY + K Q L+T+FSAPN Sbjct: 221 ND-RGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQ------LVTLFSAPN 273 Query: 320 YLDVYNNKAAVLKYENNVM 338 Y ++N ++ + +M Sbjct: 274 YCGEFDNAGGMMSVDETLM 292 >4ZVZ-A nrPDB Length = 333 Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 119/296 (40%), Positives = 173/296 (58%), Gaps = 22/296 (7%) Query: 62 EGRVDEEIALRIINEGAAILRREKTMIEVE----APITVCGDIHGQFFDLMKLFEVGGSP 117 + ++ + A +I+ + +L + T++E ITVCGD HGQF+DL+ +FE+ G P Sbjct: 35 QKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLP 94 Query: 118 ANTR-YLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECK 176 + T Y+F GD+VDRG FS+E +L L+ K+LYP LLRGNHE ++ + + F+ E K Sbjct: 95 SETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVK 154 Query: 177 IKYSERVYEACMEAFDSLPLAALLNQQFLCVHGGL-SPEIHTLDDIRRLDRFKEPPAFGP 235 KY+ ++YE E F+ LPLA +N + L +HGGL S + TLDDIR+++R ++PP GP Sbjct: 155 AKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGP 214 Query: 236 MCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDA 295 MCDLLWSDP G S+ RG S + FL+ NNL IIR+HE + Sbjct: 215 MCDLLWSDPQPQNGRSISK--------RGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAE 266 Query: 296 GYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM--NIRQFNCSPHP 349 GY + + +T+FSAPNY D NKA+ + + + + QF PHP Sbjct: 267 GYEVAHGGRC------VTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHP 316 >4JA9-A nrPDB Length = 488 Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 118/296 (39%), Positives = 172/296 (58%), Gaps = 22/296 (7%) Query: 62 EGRVDEEIALRIINEGAAILRREKTMIEVE----APITVCGDIHGQFFDLMKLFEVGGSP 117 + ++ + A +I+ + +L + T++E ITVCGD HGQF+DL+ +FE+ G P Sbjct: 190 QKKLHRKCAYQILVQVKEVLCKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLP 249 Query: 118 ANTR-YLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECK 176 + T Y+F GD+VDRG FS+E +L L+ K+LYP LLRGNHE ++ + + F+ E K Sbjct: 250 SETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVK 309 Query: 177 IKYSERVYEACMEAFDSLPLAALLNQQFLCVHGGL-SPEIHTLDDIRRLDRFKEPPAFGP 235 KY+ ++YE E F+ LPLA +N + L +HGGL S + TLDDIR+++R ++PP GP Sbjct: 310 AKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGP 369 Query: 236 MCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDA 295 MCDLLWSDP G S+ RG S + FL+ N L IIR+HE + Sbjct: 370 MCDLLWSDPQPQNGRSVSK--------RGVSCQFGPDVTKAFLEENQLDYIIRSHEVKAE 421 Query: 296 GYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM--NIRQFNCSPHP 349 GY + + +T+FSAPNY D NKA+ + + + + QF PHP Sbjct: 422 GYEVAHGGRC------VTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHP 471 >5JJT-A nrPDB Length = 479 Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 127/336 (37%), Positives = 185/336 (55%), Gaps = 31/336 (9%) Query: 37 RLTSEEVFDLDGIPRVDVLKNHLVKEGRVDEEIALRIINEGAAILRREKTMIEVEAP--- 93 R+ EEV + V + + + + A +I+ + IL +++++ P Sbjct: 162 RIEGEEV----TLDFVKTMMEDFKNQKTLHKRYAYQIVLQTRQILLALPSLVDISVPHGK 217 Query: 94 -ITVCGDIHGQFFDLMKLFEVGGSPANTR-YLFLGDYVDRGYFSIECVLYLWVLKILYPS 151 ITVCGD+HGQF+DL+ +FE+ G P+ YLF GD+VDRG FS+E +L L+ K + PS Sbjct: 218 HITVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSVEIILTLFAFKCMCPS 277 Query: 152 TLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFDSLPLAALLNQQFLCVHGGL 211 +++L RGNHE + + + + F+ E + K SE+ + E F LPLA ++N + VHGGL Sbjct: 278 SIYLARGNHESKSMNKIYGFEGEVRSKLSEKFVDLFAEVFCYLPLAHVINGKVFVVHGGL 337 Query: 212 -SPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYN 270 S + L DIR +DRF EPP G MC+LLWSDP G S+ RG + Sbjct: 338 FSVDGVKLSDIRAIDRFCEPPEEGLMCELLWSDPQPLPGRGPSK--------RGVGLSFG 389 Query: 271 YPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAV 330 FLQ+NNL ++R+HE +D GY + + LIT+FSAPNY D NK A Sbjct: 390 GDVTKRFLQDNNLDLLVRSHEVKDEGYEVEHDGK------LITVFSAPNYCDQMGNKGAF 443 Query: 331 LKYENNVM--NIRQFNCSPHPYWLP-----NFMDVF 359 +++E M NI F+ PHP P NF+ +F Sbjct: 444 IRFEAPDMKPNIVTFSAVPHPDVKPMAYANNFLRMF 479 >3ICF-A nrPDB Length = 335 Score = 202 bits (513), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 113/290 (38%), Positives = 166/290 (57%), Gaps = 25/290 (8%) Query: 52 VDVLKNHLVKEGR-VDEEIALRIINEGAAILRREKTMIEVE------APITVCGDIHGQF 104 + + N L +G+ + ++ II+ + R+E +M+E+E I+VCGD HGQF Sbjct: 17 ISKMVNDLFLKGKYLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQF 76 Query: 105 FDLMKLFEVGG--SPANTRYLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHEC 162 +D++ LF G P +T YLF GD+VDRG +S E L + LKIL+P+ FL RGNHE Sbjct: 77 YDVLNLFRKFGKVGPKHT-YLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHES 135 Query: 163 RHLTEYFTFKQECKIKYSERVYEACMEAFDSLPLAALLNQQFLCVHGGL-SPEIHTLDDI 221 ++ + + F+ ECK KYS+R++ ++F+SLPLA L+N +L +HGGL S TL D Sbjct: 136 DNMNKIYGFEDECKYKYSQRIFNMFAQSFESLPLATLINNDYLVMHGGLPSDPSATLSDF 195 Query: 222 RRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNN 281 + +DRF +PP G +LLW+DP E G SQ RG + + FL+NN Sbjct: 196 KNIDRFAQPPRDGAFMELLWADPQEANGMGPSQ--------RGLGHAFGPDITDRFLRNN 247 Query: 282 NLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVL 331 L I R+HE + G + +K + L+T+FSAPNY D N V+ Sbjct: 248 KLRKIFRSHELRMGGVQFEQKGK------LMTVFSAPNYCDSQGNLGGVI 291 >5JPE-A nrPDB Length = 311 Score = 201 bits (512), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 103/273 (37%), Positives = 161/273 (58%), Gaps = 14/273 (5%) Query: 66 DEEIALRIINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFL 125 + EI L I I + +++E+ P+ V GD+HGQ+ DL+++F G P T YLFL Sbjct: 30 NTEIEL-ICASAREIFLSQPSLLELAPPVKVVGDVHGQYHDLIRIFSKCGFPPKTNYLFL 88 Query: 126 GDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYE 185 GDYV+RG S+E +L L KI YP FLLRGNHEC ++T + F ECK + + + ++ Sbjct: 89 GDYVNRGKQSLETILLLLCYKIKYPENFFLLRGNHECANVTRVYGFYDECKRRCNIKTWK 148 Query: 186 ACMEAFDSLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPS 245 ++ F++LP+AA++ + CVHGGLSP ++++D+IR + R + P FG + DLLWSDP+ Sbjct: 149 LFIDTFNTLPIAAIVAGKIFCVHGGLSPVLNSMDEIRNIARPTDVPDFGLLNDLLWSDPA 208 Query: 246 EDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQT 305 + + E RG SY ++ A+ +FL N + RAH + GY + Sbjct: 209 DTINEWEDNE-------RGVSYVFSKVAINKFLSKFNFDLVCRAHMVVEDGYEFFNDR-- 259 Query: 306 TGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM 338 +L+T+FSAPNY ++N AV+ +++ Sbjct: 260 ----TLVTVFSAPNYCGEFDNWGAVMGVSEDLL 288 >2F2P-A nrPDB Length = 179 Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 21/22 (95%), Positives = 22/22 (100%) Query: 401 RKEIIRNKIRAIGKMARVFSVL 422 RKE+IRNKIRAIGKMARVFSVL Sbjct: 158 RKEVIRNKIRAIGKMARVFSVL 179 >1G5B-A nrPDB Length = 221 Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 7/69 (10%) Query: 94 ITVCGDIHGQFFDLM-KLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWVLKILYPST 152 I V GD+HG + +LM KL +G + +GD VDRG ++EC L+++ Sbjct: 15 IWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVEC------LELITFPW 68 Query: 153 LFLLRGNHE 161 +RGNHE Sbjct: 69 FRAVRGNHE 77 >2LHI-A nrPDB Length = 176 Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 16/72 (22%) Query: 363 LPFVGEKVTEMLVN-VLSICSDDE----------LMTEGEDQFDGSAAARKEIIRNKIRA 411 L +GEK+T+ V+ +L SD L+++G S R++ +RNKI A Sbjct: 110 LTSIGEKLTDAEVDDMLREVSDGSGEINIQQFAALLSKG-----SSTGTRRKALRNKILA 164 Query: 412 IGKMARVFSVLR 423 I K++R+FSVLR Sbjct: 165 IAKVSRMFSVLR 176 >5UQE-A nrPDB Length = 520 Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 230 PPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEF 277 P G MC WS P + GN HF H+ V C+ F+NY + F Sbjct: 357 PNVMGMMC---WSPPLDKMGNSVKGIHFCHDLVSLCN-FHNYDNLRHF 400 >5W2J-A nrPDB Length = 411 Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 230 PPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEF 277 P G MC WS P + GN HF H+ V C+ F+NY + F Sbjct: 358 PNVMGMMC---WSPPLDKMGNSVKGIHFCHDLVSLCN-FHNYDNLRHF 401 >3SS3-A nrPDB Length = 479 Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 230 PPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEF 277 P G MC WS P + GN HF H+ V C+ F+NY + F Sbjct: 374 PNVMGMMC---WSPPLDKMGNSVKGIHFCHDLVSLCN-FHNYDNLRHF 417 >5WJ6-A nrPDB Length = 539 Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Query: 230 PPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEF 277 P G MC WS P + GN HF H+ V C+ F+NY + F Sbjct: 434 PNVMGMMC---WSPPLDKMGNSVKGIHFCHDLVSLCN-FHNYDNLRHF 477 >5JYO-D nrPDB Length = 333 Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 4/42 (9%) Query: 230 PPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNY 271 P G MC WS P + GN HF H+ V C+ F+NY Sbjct: 293 PNVMGMMC---WSPPLDKMGNSVKGIHFCHDLVSLCN-FHNY 330 >5VJW-A nrPDB Length = 309 Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 7/75 (9%) Query: 94 ITVCGDIHGQFFDLMKLF---EVGGSPAN---TRYLFLGDYVDRGYFSIECVLYLWVLKI 147 + GDIHG L L+ + P++ +FLGDY DRG + + + +L L Sbjct: 8 VICVGDIHGYISKLNNLWLNLQSAIDPSDFSSALVIFLGDYCDRGPETRKVIDFLISLPE 67 Query: 148 LYPS-TLFLLRGNHE 161 +P T L GNH+ Sbjct: 68 KHPDQTHVFLAGNHD 82 >1YQX-A nrPDB Length = 366 Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust. Identities = 23/111 (20%), Positives = 50/111 (45%), Gaps = 2/111 (1%) Query: 382 SDDELMTEGEDQFDGSAAARKEIIRNKIRAIGKMARVFSVLREESESVLTLKGLTPTGML 441 +D L++ ++Q +A II + + A+ + +F +L+ + +L P L Sbjct: 233 ADSFLVSRDQEQMQAAAGTLDGII-DTVSAVHPLLPLFGLLKSHGKLILVGAPEKPL-EL 290 Query: 442 PSGVLAGGRQTLQSATVEAIEAEKAIRGFSPPHRICSFEEAKGLDRINERM 492 P+ L GR+ + + + ++ + + F+ H I + E D +N M Sbjct: 291 PAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKHNITADIEVISTDYLNTAM 341 >2NUX-A nrPDB Length = 288 Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 9/58 (15%) Query: 35 THRLTSEEVFDLDG--------IPRVDVLKNHLVKEGRVDEEIALR-IINEGAAILRR 83 ++ L + LDG IP V V + L+K+G++D+ + L+ +IN A ILR+ Sbjct: 178 SNTLIYYSLLSLDGVVASFTNFIPEVIVKQRDLIKQGKLDDALRLQELINRLADILRK 235 >2GOJ-A nrPDB Length = 197 Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 18/99 (18%) Query: 246 EDFGNEKS-QEHFSHNTVRGCSYF---YNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYR 301 EDFG+ + +E FS N + C +F + + A L NNN L I++ H DAG + Sbjct: 98 EDFGSFNNFKEQFS-NIL--CGHFGSGWGWLA----LNNNNKLVILQTH---DAGNPI-- 145 Query: 302 KSQTTGFPSLI-TIFSAPNYLDVYNNKAAVLKYENNVMN 339 TG P L I+ Y+D N++A+ +K N++N Sbjct: 146 -KDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWNLVN 183 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4ORC-A nrPDB 937 0.0 4ORB-A nrPDB 866 0.0 4IL1-A nrPDB 839 0.0 5JJT-A nrPDB 444 e-125 4ZVZ-A nrPDB 425 e-119 4JA9-A nrPDB 421 e-118 5W0W-C nrPDB 415 e-116 3V4Y-A nrPDB 414 e-116 1S70-A nrPDB 404 e-113 5JPE-A nrPDB 400 e-112 3ICF-A nrPDB 392 e-109 2F2P-A nrPDB 48 9e-06 Sequences not found previously or not previously below threshold: 1G5B-A nrPDB 47 2e-05 2DFJ-A nrPDB 42 4e-04 5VJW-A nrPDB 41 0.001 2LHI-A nrPDB 38 0.012 6DJX-A nrPDB 35 0.093 6DJW-A nrPDB 35 0.094 4CKE-A nrPDB 35 0.098 1YQX-A nrPDB 33 0.30 3WF0-A nrPDB 30 1.9 4UUD-B nrPDB 30 2.8 6CV7-A nrPDB 30 3.0 2FAH-A nrPDB 30 3.6 5T4M-A nrPDB 29 5.0 3PRL-A nrPDB 29 5.4 5ULY-A nrPDB 28 6.7 3GRV-A nrPDB 28 8.7 3FYD-A nrPDB 28 8.7 >4ORC-A nrPDB Length = 544 Score = 937 bits (2423), Expect = 0.0, Method: Composition-based stats. Identities = 524/524 (100%), Positives = 524/524 (100%) Query: 1 MAAPEPARAAPPPPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDLDGIPRVDVLKNHLV 60 MAAPEPARAAPPPPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDLDGIPRVDVLKNHLV Sbjct: 21 MAAPEPARAAPPPPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDLDGIPRVDVLKNHLV 80 Query: 61 KEGRVDEEIALRIINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANT 120 KEGRVDEEIALRIINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANT Sbjct: 81 KEGRVDEEIALRIINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANT 140 Query: 121 RYLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYS 180 RYLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYS Sbjct: 141 RYLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYS 200 Query: 181 ERVYEACMEAFDSLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLL 240 ERVYEACMEAFDSLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLL Sbjct: 201 ERVYEACMEAFDSLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLL 260 Query: 241 WSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMY 300 WSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMY Sbjct: 261 WSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMY 320 Query: 301 RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFT 360 RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFT Sbjct: 321 RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFT 380 Query: 361 WSLPFVGEKVTEMLVNVLSICSDDELMTEGEDQFDGSAAARKEIIRNKIRAIGKMARVFS 420 WSLPFVGEKVTEMLVNVLSICSDDELMTEGEDQFDGSAAARKEIIRNKIRAIGKMARVFS Sbjct: 381 WSLPFVGEKVTEMLVNVLSICSDDELMTEGEDQFDGSAAARKEIIRNKIRAIGKMARVFS 440 Query: 421 VLREESESVLTLKGLTPTGMLPSGVLAGGRQTLQSATVEAIEAEKAIRGFSPPHRICSFE 480 VLREESESVLTLKGLTPTGMLPSGVLAGGRQTLQSATVEAIEAEKAIRGFSPPHRICSFE Sbjct: 441 VLREESESVLTLKGLTPTGMLPSGVLAGGRQTLQSATVEAIEAEKAIRGFSPPHRICSFE 500 Query: 481 EAKGLDRINERMPPRKDAVQQDGFNSLNTAHATENHGTGNHTAQ 524 EAKGLDRINERMPPRKDAVQQDGFNSLNTAHATENHGTGNHTAQ Sbjct: 501 EAKGLDRINERMPPRKDAVQQDGFNSLNTAHATENHGTGNHTAQ 544 >4ORB-A nrPDB Length = 519 Score = 866 bits (2237), Expect = 0.0, Method: Composition-based stats. Identities = 423/511 (82%), Positives = 467/511 (91%), Gaps = 13/511 (2%) Query: 13 PPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDLDGIPRVDVLKNHLVKEGRVDEEIALR 72 P P DRVVKAVPFPP+HRLT++EVFD DG PRVD+LK HL+KEGR++E +ALR Sbjct: 4 PKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEESVALR 63 Query: 73 IINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 132 II EGA+ILR+EK +++++AP+TVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG Sbjct: 64 IITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 123 Query: 133 YFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFD 192 YFSIECVLYLW LKILYP TLFLLRGNHECRHLTEYFTFKQECKIKYSERVY+ACM+AFD Sbjct: 124 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFD 183 Query: 193 SLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEK 252 LPLAAL+NQQFLCVHGGLSPEI+TLDDIR+LDRFKEPPA+GPMCD+LWSDP EDFGNEK Sbjct: 184 CLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEK 243 Query: 253 SQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLI 312 +QEHF+HNTVRGCSYFY+YPAVC+FLQ+NNLLSI+RAHEAQDAGYRMYRKSQTTGFPSLI Sbjct: 244 TQEHFTHNTVRGCSYFYSYPAVCDFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLI 303 Query: 313 TIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTE 372 TIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTE Sbjct: 304 TIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTE 363 Query: 373 MLVNVLSICSDDELMTEGEDQFDG-SAAARKEIIRNKIRAIGKMARVFSVLREESESVLT 431 MLVNVL+ICSDDEL +E ED FDG +AAARKE+IRNKIRAIGKMARVFSVLREESESVLT Sbjct: 364 MLVNVLNICSDDELGSE-EDGFDGATAAARKEVIRNKIRAIGKMARVFSVLREESESVLT 422 Query: 432 LKGLTPTGMLPSGVLAGGRQTLQSATVEAIEAEKAIRGFSPPHRICSFEEAKGLDRINER 491 LKGLTPTGMLPSGVL+GG+QTLQS AI+GFSP H+I SFEEAKGLDRINER Sbjct: 423 LKGLTPTGMLPSGVLSGGKQTLQS----------AIKGFSPQHKITSFEEAKGLDRINER 472 Query: 492 MPPRKDAVQQDG-FNSLNTAHATENHGTGNH 521 MPPR+DA+ D NS+N A A+E +GT ++ Sbjct: 473 MPPRRDAMPSDANLNSINKALASETNGTDSN 503 >4IL1-A nrPDB Length = 823 Score = 839 bits (2168), Expect = 0.0, Method: Composition-based stats. Identities = 414/490 (84%), Positives = 453/490 (92%), Gaps = 12/490 (2%) Query: 13 PPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDLDGIPRVDVLKNHLVKEGRVDEEIALR 72 P P DRVVKAVPFPP+HRLT++EVFD DG PRVD+LK HL+KEGR++E +ALR Sbjct: 337 PKAIDPKLSTTDRVVKAVPFPPSHRLTAKEVFDNDGKPRVDILKAHLMKEGRLEESVALR 396 Query: 73 IINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 132 II EGA+ILR+EK +++++AP+TVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG Sbjct: 397 IITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRG 456 Query: 133 YFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFD 192 YFSIECVLYLW LKILYP TLFLLRGNHECRHLTEYFTFKQECKIKYSERVY+ACM+AFD Sbjct: 457 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMDAFD 516 Query: 193 SLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEK 252 LPLAAL+NQQFLCVHGGLSPEI+TLDDIR+LDRFKEPPA+GPMCD+LWSDP EDFGNEK Sbjct: 517 CLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILWSDPLEDFGNEK 576 Query: 253 SQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLI 312 +QEHF+HNTVRGCSYFY+YPAVC+FLQ+NNLLSI+RAHEAQDAGYRMYRKSQTTGFPSLI Sbjct: 577 TQEHFTHNTVRGCSYFYSYPAVCDFLQHNNLLSILRAHEAQDAGYRMYRKSQTTGFPSLI 636 Query: 313 TIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTE 372 TIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTE Sbjct: 637 TIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTE 696 Query: 373 MLVNVLSICSDDELMTEGEDQFDG-SAAARKEIIRNKIRAIGKMARVFSVLREESESVLT 431 MLVNVL+ICSDDEL +E ED FDG +AAARKE+IRNKIRAIGKMARVFSVLREESESVLT Sbjct: 697 MLVNVLNICSDDELGSE-EDGFDGATAAARKEVIRNKIRAIGKMARVFSVLREESESVLT 755 Query: 432 LKGLTPTGMLPSGVLAGGRQTLQSATVEAIEAEKAIRGFSPPHRICSFEEAKGLDRINER 491 LKGLTPTGMLPSGVL+GG+QTLQS AI+GFSP H+I SFEEAKGLDRINER Sbjct: 756 LKGLTPTGMLPSGVLSGGKQTLQS----------AIKGFSPQHKITSFEEAKGLDRINER 805 Query: 492 MPPRKDAVQQ 501 MPPR+DA+ Sbjct: 806 MPPRRDAMPS 815 >5JJT-A nrPDB Length = 479 Score = 444 bits (1141), Expect = e-125, Method: Composition-based stats. Identities = 127/336 (37%), Positives = 185/336 (55%), Gaps = 31/336 (9%) Query: 37 RLTSEEVFDLDGIPRVDVLKNHLVKEGRVDEEIALRIINEGAAILRREKTMIEVEAP--- 93 R+ EEV + V + + + + A +I+ + IL +++++ P Sbjct: 162 RIEGEEV----TLDFVKTMMEDFKNQKTLHKRYAYQIVLQTRQILLALPSLVDISVPHGK 217 Query: 94 -ITVCGDIHGQFFDLMKLFEVGGSPANTR-YLFLGDYVDRGYFSIECVLYLWVLKILYPS 151 ITVCGD+HGQF+DL+ +FE+ G P+ YLF GD+VDRG FS+E +L L+ K + PS Sbjct: 218 HITVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSVEIILTLFAFKCMCPS 277 Query: 152 TLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFDSLPLAALLNQQFLCVHGGL 211 +++L RGNHE + + + + F+ E + K SE+ + E F LPLA ++N + VHGGL Sbjct: 278 SIYLARGNHESKSMNKIYGFEGEVRSKLSEKFVDLFAEVFCYLPLAHVINGKVFVVHGGL 337 Query: 212 -SPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYN 270 S + L DIR +DRF EPP G MC+LLWSDP G S+ RG + Sbjct: 338 FSVDGVKLSDIRAIDRFCEPPEEGLMCELLWSDPQPLPGRGPSK--------RGVGLSFG 389 Query: 271 YPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAV 330 FLQ+NNL ++R+HE +D GY + + LIT+FSAPNY D NK A Sbjct: 390 GDVTKRFLQDNNLDLLVRSHEVKDEGYEVEHDGK------LITVFSAPNYCDQMGNKGAF 443 Query: 331 LKYENNVM--NIRQFNCSPHPYWLP-----NFMDVF 359 +++E M NI F+ PHP P NF+ +F Sbjct: 444 IRFEAPDMKPNIVTFSAVPHPDVKPMAYANNFLRMF 479 >4ZVZ-A nrPDB Length = 333 Score = 425 bits (1092), Expect = e-119, Method: Composition-based stats. Identities = 122/314 (38%), Positives = 177/314 (56%), Gaps = 22/314 (7%) Query: 48 GIPRVDVLKNHLVKEGRVDEEIALRIINEGAAILRREKTMIEVE----APITVCGDIHGQ 103 I + L + ++ + A +I+ + +L + T++E ITVCGD HGQ Sbjct: 21 TISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQ 80 Query: 104 FFDLMKLFEVGGSPANTR-YLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHEC 162 F+DL+ +FE+ G P+ T Y+F GD+VDRG FS+E +L L+ K+LYP LLRGNHE Sbjct: 81 FYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHET 140 Query: 163 RHLTEYFTFKQECKIKYSERVYEACMEAFDSLPLAALLNQQFLCVHGGL-SPEIHTLDDI 221 ++ + + F+ E K KY+ ++YE E F+ LPLA +N + L +HGGL S + TLDDI Sbjct: 141 DNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDI 200 Query: 222 RRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNN 281 R+++R ++PP GPMCDLLWSDP G S+ RG S + FL+ N Sbjct: 201 RKIERNRQPPDSGPMCDLLWSDPQPQNGRSISK--------RGVSCQFGPDVTKAFLEEN 252 Query: 282 NLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM--N 339 NL IIR+HE + GY + + +T+FSAPNY D NKA+ + + + + Sbjct: 253 NLDYIIRSHEVKAEGYEVAHGGRC------VTVFSAPNYCDQMGNKASYIHLQGSDLRPQ 306 Query: 340 IRQFNCSPHPYWLP 353 QF PHP P Sbjct: 307 FHQFTAVPHPNVKP 320 >4JA9-A nrPDB Length = 488 Score = 421 bits (1081), Expect = e-118, Method: Composition-based stats. Identities = 121/314 (38%), Positives = 176/314 (56%), Gaps = 22/314 (7%) Query: 48 GIPRVDVLKNHLVKEGRVDEEIALRIINEGAAILRREKTMIEVE----APITVCGDIHGQ 103 I + L + ++ + A +I+ + +L + T++E ITVCGD HGQ Sbjct: 176 TITFMKDLMQWYKDQKKLHRKCAYQILVQVKEVLCKLSTLVETTLKETEKITVCGDTHGQ 235 Query: 104 FFDLMKLFEVGGSPANTR-YLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHEC 162 F+DL+ +FE+ G P+ T Y+F GD+VDRG FS+E +L L+ K+LYP LLRGNHE Sbjct: 236 FYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHET 295 Query: 163 RHLTEYFTFKQECKIKYSERVYEACMEAFDSLPLAALLNQQFLCVHGGL-SPEIHTLDDI 221 ++ + + F+ E K KY+ ++YE E F+ LPLA +N + L +HGGL S + TLDDI Sbjct: 296 DNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDI 355 Query: 222 RRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNN 281 R+++R ++PP GPMCDLLWSDP G S+ RG S + FL+ N Sbjct: 356 RKIERNRQPPDSGPMCDLLWSDPQPQNGRSVSK--------RGVSCQFGPDVTKAFLEEN 407 Query: 282 NLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM--N 339 L IIR+HE + GY + + +T+FSAPNY D NKA+ + + + + Sbjct: 408 QLDYIIRSHEVKAEGYEVAHGGRC------VTVFSAPNYCDQMGNKASYIHLQGSDLRPQ 461 Query: 340 IRQFNCSPHPYWLP 353 QF PHP P Sbjct: 462 FHQFTAVPHPNVKP 475 >5W0W-C nrPDB Length = 311 Score = 415 bits (1068), Expect = e-116, Method: Composition-based stats. Identities = 125/309 (40%), Positives = 174/309 (56%), Gaps = 20/309 (6%) Query: 41 EEVFDLDGIPRVDVLKNHLVKEGRVDEEIALRIINEGAAILRREKTMIEVEAPITVCGDI 100 E+VF + +D L + ++ E + + IL +E + EV P+TVCGD+ Sbjct: 5 EKVFTKE----LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDV 60 Query: 101 HGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNH 160 HGQF DLM+LF +GG +T YLF+GDYVDRGY+S+E V L LK+ Y + +LRGNH Sbjct: 61 HGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNH 120 Query: 161 ECRHLTEYFTFKQECKIKY-SERVYEACMEAFDSLPLAALLNQQFLCVHGGLSPEIHTLD 219 E R +T+ + F EC KY + V++ + FD LPL AL++ Q C+HGGLSP I TLD Sbjct: 121 ESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLD 180 Query: 220 DIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQ 279 IR LDR +E P GPMCDLLWSDP + G S RG Y + F Sbjct: 181 HIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISP--------RGAGYTFGQDISETFNH 232 Query: 280 NNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-M 338 N L + RAH+ GY +++TIFSAPNY N+AA+++ ++ + Sbjct: 233 ANGLTLVSRAHQLVMEGYNWCHDR------NVVTIFSAPNYCYRCGNQAAIMELDDTLKY 286 Query: 339 NIRQFNCSP 347 + QF+ +P Sbjct: 287 SFLQFDPAP 295 >3V4Y-A nrPDB Length = 306 Score = 414 bits (1065), Expect = e-116, Method: Composition-based stats. Identities = 107/275 (38%), Positives = 167/275 (60%), Gaps = 13/275 (4%) Query: 64 RVDEEIALRIINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYL 123 ++ E + + I + ++E+EAP+ +CGDIHGQ++DL++LFE GG P + YL Sbjct: 28 QLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 87 Query: 124 FLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERV 183 FLGDYVDRG S+E + L KI YP FLLRGNHEC + + F ECK +Y+ ++ Sbjct: 88 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKL 147 Query: 184 YEACMEAFDSLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSD 243 ++ + F+ LP+AA+++++ C HGGLSP++ +++ IRR+ R + P G +CDLLWSD Sbjct: 148 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSD 207 Query: 244 PSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKS 303 P +D + + N RG S+ + V +FL ++L I RAH+ + GY + K Sbjct: 208 PDKDV------QGWGEND-RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKR 260 Query: 304 QTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM 338 Q L+T+FSAPNY ++N A++ + +M Sbjct: 261 Q------LVTLFSAPNYCGEFDNAGAMMSVDETLM 289 >1S70-A nrPDB Length = 330 Score = 404 bits (1038), Expect = e-113, Method: Composition-based stats. Identities = 105/275 (38%), Positives = 164/275 (59%), Gaps = 13/275 (4%) Query: 64 RVDEEIALRIINEGAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYL 123 ++ E + + I + ++E+EAP+ +CGDIHGQ+ DL++LFE GG P YL Sbjct: 31 QMTEAEVRGLCIKSREIFLSQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYL 90 Query: 124 FLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERV 183 FLGDYVDRG S+E + L KI YP FLLRGNHEC + + F ECK +++ ++ Sbjct: 91 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNIKL 150 Query: 184 YEACMEAFDSLPLAALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSD 243 ++ + F+ LP+AA+++++ C HGGLSP++ +++ IRR+ R + P G +CDLLWSD Sbjct: 151 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSD 210 Query: 244 PSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKS 303 P +D + + N RG S+ + V +FL ++L I RAH+ + GY + K Sbjct: 211 PDKDV------QGWGEND-RGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKR 263 Query: 304 QTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM 338 Q L+T+FSAPNY ++N ++ + +M Sbjct: 264 Q------LVTLFSAPNYCGEFDNAGGMMSVDETLM 292 >5JPE-A nrPDB Length = 311 Score = 400 bits (1029), Expect = e-112, Method: Composition-based stats. Identities = 106/301 (35%), Positives = 167/301 (55%), Gaps = 20/301 (6%) Query: 43 VFDLDGIPRVDVLKNHLVKEGRVDEEIALR-----IINEGAAILRREKTMIEVEAPITVC 97 + D+D + +D L N R I I + +++E+ P+ V Sbjct: 3 MIDIDSL--IDKLLNAGFSGKRTKNVCLKNTEIELICASAREIFLSQPSLLELAPPVKVV 60 Query: 98 GDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFLLR 157 GD+HGQ+ DL+++F G P T YLFLGDYV+RG S+E +L L KI YP FLLR Sbjct: 61 GDVHGQYHDLIRIFSKCGFPPKTNYLFLGDYVNRGKQSLETILLLLCYKIKYPENFFLLR 120 Query: 158 GNHECRHLTEYFTFKQECKIKYSERVYEACMEAFDSLPLAALLNQQFLCVHGGLSPEIHT 217 GNHEC ++T + F ECK + + + ++ ++ F++LP+AA++ + CVHGGLSP +++ Sbjct: 121 GNHECANVTRVYGFYDECKRRCNIKTWKLFIDTFNTLPIAAIVAGKIFCVHGGLSPVLNS 180 Query: 218 LDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEF 277 +D+IR + R + P FG + DLLWSDP++ + E RG SY ++ A+ +F Sbjct: 181 MDEIRNIARPTDVPDFGLLNDLLWSDPADTINEWEDNE-------RGVSYVFSKVAINKF 233 Query: 278 LQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV 337 L N + RAH + GY + +L+T+FSAPNY ++N AV+ ++ Sbjct: 234 LSKFNFDLVCRAHMVVEDGYEFFNDR------TLVTVFSAPNYCGEFDNWGAVMGVSEDL 287 Query: 338 M 338 + Sbjct: 288 L 288 >3ICF-A nrPDB Length = 335 Score = 392 bits (1006), Expect = e-109, Method: Composition-based stats. Identities = 118/330 (35%), Positives = 174/330 (52%), Gaps = 37/330 (11%) Query: 46 LDGIPRVDVLKNHLVKEGR-VDEEIALRIINEGAAILRREKTMIEVE------APITVCG 98 + + N L +G+ + ++ II+ + R+E +M+E+E I+VCG Sbjct: 11 NMSQEFISKMVNDLFLKGKYLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISVCG 70 Query: 99 DIHGQFFDLMKLFEVGG--SPANTRYLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFLL 156 D HGQF+D++ LF G P +T YLF GD+VDRG +S E L + LKIL+P+ FL Sbjct: 71 DTHGQFYDVLNLFRKFGKVGPKHT-YLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLN 129 Query: 157 RGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFDSLPLAALLNQQFLCVHGGL-SPEI 215 RGNHE ++ + + F+ ECK KYS+R++ ++F+SLPLA L+N +L +HGGL S Sbjct: 130 RGNHESDNMNKIYGFEDECKYKYSQRIFNMFAQSFESLPLATLINNDYLVMHGGLPSDPS 189 Query: 216 HTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVC 275 TL D + +DRF +PP G +LLW+DP E G SQ RG + + Sbjct: 190 ATLSDFKNIDRFAQPPRDGAFMELLWADPQEANGMGPSQ--------RGLGHAFGPDITD 241 Query: 276 EFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKY-- 333 FL+NN L I R+HE + G + +K + L+T+FSAPNY D N V+ Sbjct: 242 RFLRNNKLRKIFRSHELRMGGVQFEQKGK------LMTVFSAPNYCDSQGNLGGVIHVVP 295 Query: 334 ----------ENNVMNIRQFNCSPHPYWLP 353 ++ + I F HP P Sbjct: 296 GHGILQAGRNDDQNLIIETFEAVEHPDIKP 325 >2F2P-A nrPDB Length = 179 Score = 48.1 bits (113), Expect = 9e-06, Method: Composition-based stats. Identities = 21/22 (95%), Positives = 22/22 (100%) Query: 401 RKEIIRNKIRAIGKMARVFSVL 422 RKE+IRNKIRAIGKMARVFSVL Sbjct: 158 RKEVIRNKIRAIGKMARVFSVL 179 >1G5B-A nrPDB Length = 221 Score = 47.0 bits (110), Expect = 2e-05, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 7/69 (10%) Query: 94 ITVCGDIHGQFFDLMKLFEVGGSPANTRYLF-LGDYVDRGYFSIECVLYLWVLKILYPST 152 I V GD+HG + +LM + G L +GD VDRG ++EC+ I +P Sbjct: 15 IWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLEL-----ITFP-W 68 Query: 153 LFLLRGNHE 161 +RGNHE Sbjct: 69 FRAVRGNHE 77 >2DFJ-A nrPDB Length = 280 Score = 42.4 bits (98), Expect = 4e-04, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 76/187 (40%), Gaps = 24/187 (12%) Query: 96 VCGDIHGQFFDLMKLFEVGGSPANTRYLFL-GDYVDRGYFSIECVLYLWVLKILYPSTLF 154 + GD+HG + +L+ L L+L GD V RG S++ + Y+ L ++ Sbjct: 5 LIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLG----DSVR 60 Query: 155 LLRGNHECRHLTEYFTFKQECKIKYSERVYEACM-----EAFDSL---PLAALLNQQFLC 206 L+ GNH+ L F + K +R+ E + L PL + ++ L Sbjct: 61 LVLGNHD---LHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLV 117 Query: 207 V-HGGLSP--EIHTLDDI-RRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTV 262 + H G++P ++ T + R ++ ++ D ++ D N S E + Sbjct: 118 MAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGD---MPNNW-SPELRGLGRL 173 Query: 263 RGCSYFY 269 R + + Sbjct: 174 RFITNAF 180 >5VJW-A nrPDB Length = 309 Score = 40.8 bits (94), Expect = 0.001, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 8/79 (10%) Query: 91 EAPITVC-GDIHGQFFDLMKLF---EVGGSPANTR---YLFLGDYVDRGYFSIECVLYLW 143 + +C GDIHG L L+ + P++ +FLGDY DRG + + + +L Sbjct: 4 KPRTVICVGDIHGYISKLNNLWLNLQSAIDPSDFSSALVIFLGDYCDRGPETRKVIDFLI 63 Query: 144 VLKILYPSTLFL-LRGNHE 161 L +P + L GNH+ Sbjct: 64 SLPEKHPDQTHVFLAGNHD 82 >2LHI-A nrPDB Length = 176 Score = 37.7 bits (86), Expect = 0.012, Method: Composition-based stats. Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 6/67 (8%) Query: 363 LPFVGEKVTEMLVNVLSICSDDELMTEGEDQFDG------SAAARKEIIRNKIRAIGKMA 416 L +GEK+T+ V+ + D QF S R++ +RNKI AI K++ Sbjct: 110 LTSIGEKLTDAEVDDMLREVSDGSGEINIQQFAALLSKGSSTGTRRKALRNKILAIAKVS 169 Query: 417 RVFSVLR 423 R+FSVLR Sbjct: 170 RMFSVLR 176 >6DJX-A nrPDB Length = 432 Score = 34.6 bits (78), Expect = 0.093, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 88/262 (33%), Gaps = 39/262 (14%) Query: 33 PPTHRLTSEEVFDLDGIPRVDVLKNHLVK---------EGRVDEEIALRIINEGAAILRR 83 P R SEE ++ R K H +G++ + GA + R Sbjct: 84 PQPQRQRSEERINITEEDRQRT-KAHFFVHCAQCNKLCKGKLRVRC--SLCKGGAFTVHR 140 Query: 84 EKTMIE-VEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFL-GDYVDRGYFSIECVLY 141 + + V P + G H + ++ G P T + F G++V G L Sbjct: 141 DPECWDDVLKPRRITG--HCESQEIACFDNETGDPPFTEFYFKCGEHVSGGEKDFAAPLN 198 Query: 142 LWVLKIL------YPS-TLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFDSL 194 L + I + +L E +H+T F+Q C+ + SER + + +L Sbjct: 199 LIKINIKDVPCLACTEVSETVLVFPCESKHVTCLECFEQYCRSRLSERQFMPHPDIGYTL 258 Query: 195 PL-AALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKE----PPAFGPMCDLLWSDPSEDFG 249 P A N +H ++ + ++ R RF A G +C P G Sbjct: 259 PCPAGCENSFIEEIH---HFKLLSREEYARYQRFATEEYVLQAGGVLC------PQPGCG 309 Query: 250 NE--KSQEHFSHNTVRGCSYFY 269 E GC Y + Sbjct: 310 MGLLVEPECKKVTCQNGCGYVF 331 >6DJW-A nrPDB Length = 349 Score = 34.6 bits (78), Expect = 0.094, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 92/268 (34%), Gaps = 40/268 (14%) Query: 27 VKAVPFPPTHRLTSEEVFDLDGIPRVDVLKNHLVK---------EGRVDEEIALRIINEG 77 +++ P P RL S V ++ R K H +G++ + G Sbjct: 80 IRSRPQPQRQRLQST-VMEITEEDRQRT-KAHFFVHCAQCNKLCKGKLRVRC--SLCKGG 135 Query: 78 AAILRREKTMIE-VEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFL-GDYVDRGYFS 135 A + R+ + V P + G H + ++ G P T + F G++V G Sbjct: 136 AFTVHRDPECWDDVLKPRRITG--HCESQEIACFDNETGDPPFTEFYFKCGEHVSGGEKD 193 Query: 136 IECVLYLWVLKIL------YPS-TLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACM 188 L L + I + +L E +H+T F+Q C+ + SER + Sbjct: 194 FAAPLNLIKINIKDVPCLACTEVSETVLVFPCESKHVTCLECFEQYCRSRLSERQFMPHP 253 Query: 189 EAFDSLPL-AALLNQQFLCVHGGLSPEIHTLDDIRRLDRFKE----PPAFGPMCDLLWSD 243 + +LP A N +H ++ + ++ R RF A G +C Sbjct: 254 DIGYTLPCPAGCENSFIEEIH---HFKLLSREEYARYQRFATEEYVLQAGGVLC------ 304 Query: 244 PSEDFGNE--KSQEHFSHNTVRGCSYFY 269 P G E GC Y + Sbjct: 305 PQPGCGMGLLVEPECKKVTCQNGCGYVF 332 >4CKE-A nrPDB Length = 844 Score = 34.6 bits (78), Expect = 0.098, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 25/58 (43%) Query: 25 RVVKAVPFPPTHRLTSEEVFDLDGIPRVDVLKNHLVKEGRVDEEIALRIINEGAAILR 82 ++ +P H L + V +D I + K LV E R+ +E LR+ E I Sbjct: 75 KIRTKIPLSKVHGLDVKNVQLVDAIDNIVWEKKSLVTENRLHKECLLRLSTEERHIFL 132 >1YQX-A nrPDB Length = 366 Score = 33.1 bits (74), Expect = 0.30, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 51/114 (44%), Gaps = 2/114 (1%) Query: 379 SICSDDELMTEGEDQFDGSAAARKEIIRNKIRAIGKMARVFSVLREESESVLTLKGLTPT 438 + +D L++ ++Q +A II + + A+ + +F +L+ + +L P Sbjct: 230 NFGADSFLVSRDQEQMQAAAGTLDGII-DTVSAVHPLLPLFGLLKSHGKLILVGAPEKPL 288 Query: 439 GMLPSGVLAGGRQTLQSATVEAIEAEKAIRGFSPPHRICSFEEAKGLDRINERM 492 LP+ L GR+ + + + ++ + + F+ H I + E D +N M Sbjct: 289 -ELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKHNITADIEVISTDYLNTAM 341 >3WF0-A nrPDB Length = 678 Score = 30.4 bits (67), Expect = 1.9, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 48/136 (35%), Gaps = 27/136 (19%) Query: 77 GAAILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEV------GGSPANTRYLFLGDYVD 130 + + T + +AP++ GD+ ++F L + + G P +T G Sbjct: 321 ANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKFAYGKVTL 380 Query: 131 RGYFSIECVLYLWV----LKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEA 186 ++ L + +K LYP T + +++ F + + Sbjct: 381 EKLKTVGAALDILCPSGPIKSLYPLTFI---------QVKQHYGF---VLYRTT-----L 423 Query: 187 CMEAFDSLPLAALLNQ 202 + + PL++ LN Sbjct: 424 PQDCSNPAPLSSPLNG 439 >4UUD-B nrPDB Length = 864 Score = 30.0 bits (66), Expect = 2.8, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 16/34 (47%) Query: 2 AAPEPARAAPPPPPPPPPPPGADRVVKAVPFPPT 35 A P P+R P P PPP R +A P P+ Sbjct: 812 APPVPSRPGASPDPFGPPPQVPSRPNRAPPGVPS 845 >6CV7-A nrPDB Length = 377 Score = 29.6 bits (65), Expect = 3.0, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 11/81 (13%) Query: 211 LSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYN 270 ++P I +D R + + P G + +L P + F H R Sbjct: 279 VTPPIQAIDQDRNIQPPSDRP--GILYSILVGTPEDYP-------RFFHMHPRTAELTLL 329 Query: 271 YPAVCEFLQNNNLLSIIRAHE 291 P +F + +I+A + Sbjct: 330 EPVNRDF--HQKFDLVIKAEQ 348 >2FAH-A nrPDB Length = 608 Score = 29.6 bits (65), Expect = 3.6, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 15/52 (28%), Gaps = 8/52 (15%) Query: 226 RFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVCEF 277 RF P P+ D W DP G F RG V F Sbjct: 391 RFCAPADQCPIMDPRWDDPE---GVPIDAIIFGGRRPRGV-----PLVVEAF 434 >5T4M-A nrPDB Length = 365 Score = 28.9 bits (63), Expect = 5.0, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 11/81 (13%) Query: 211 LSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYN 270 ++P I +D R + + P G + +L P + F H R Sbjct: 41 VTPPIQAIDQDRNIQPPSDRP--GILYSILVGTPEDYP-------RFFHMHPRTAELSLL 91 Query: 271 YPAVCEFLQNNNLLSIIRAHE 291 P +F + +I+A + Sbjct: 92 EPVNRDF--HQKFDLVIKAEQ 110 >3PRL-A nrPDB Length = 505 Score = 28.9 bits (63), Expect = 5.4, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 3/83 (3%) Query: 403 EIIRNKIRAIGKMARVFSVLREESESVLTLKGLTPTGMLPSGVLAGGRQTLQSATVEAIE 462 E+ + K AIG+++R ++R ++ L L G T G G G + + E + Sbjct: 98 EVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKG---GSSKKIALVEREPLG 154 Query: 463 AEKAIRGFSPPHRICSFEEAKGL 485 AI F+ P + + + A L Sbjct: 155 VVLAISPFNYPVNLAAAKIAPAL 177 >5ULY-A nrPDB Length = 259 Score = 28.5 bits (62), Expect = 6.7, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 11/81 (13%) Query: 211 LSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYN 270 ++P I +D R + + P G + +L P + F H R Sbjct: 161 VTPPIQAIDQDRNIQPPSDRP--GILYSILVGTPEDYP-------RFFHMHPRTAELSLL 211 Query: 271 YPAVCEFLQNNNLLSIIRAHE 291 P +F + +I+A + Sbjct: 212 EPVNRDF--HQKFDLVIKAEQ 230 >3GRV-A nrPDB Length = 295 Score = 28.1 bits (61), Expect = 8.7, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 10/72 (13%) Query: 9 AAPPPPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDLDGIPRVDVLKNHLVKEGRVDEE 68 A PP P P +VK P + + +E FD + + H ++ Sbjct: 180 AKVPPSAFYPKPKVYSAIVKIKPNKGKYHIENENFFD----DFLRAIFQH------RNKS 229 Query: 69 IALRIINEGAAI 80 + +I+ + Sbjct: 230 VRKALIDSSKEL 241 >3FYD-A nrPDB Length = 263 Score = 28.1 bits (61), Expect = 8.7, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 10/72 (13%) Query: 9 AAPPPPPPPPPPPGADRVVKAVPFPPTHRLTSEEVFDLDGIPRVDVLKNHLVKEGRVDEE 68 A PP P P +VK P + + +E FD + + H ++ Sbjct: 151 AKVPPSAFYPKPKVYSAIVKIKPNKGKYHIENENFFD----DFLRAIFQH------RNKS 200 Query: 69 IALRIINEGAAI 80 + +I+ + Sbjct: 201 VRKALIDSSKEL 212 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.134 0.385 Lambda K H 0.267 0.0401 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,928,933 Number of Sequences: 36641 Number of extensions: 854078 Number of successful extensions: 4492 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 51 Number of HSP's that attempted gapping in prelim test: 3303 Number of HSP's gapped (non-prelim): 743 length of query: 524 length of database: 10,336,785 effective HSP length: 102 effective length of query: 422 effective length of database: 6,599,403 effective search space: 2784948066 effective search space used: 2784948066 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 61 (28.1 bits)