BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= P16118
(471 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
1K6M-A nrPDB 890 0.0
2BIF-A nrPDB 725 0.0
2DWP-A nrPDB 689 0.0
4D4L-A nrPDB 687 0.0
5HTK-A nrPDB 671 0.0
5HR5-A nrPDB 671 0.0
1C7Z-A nrPDB 391 e-109
4IJ6-A nrPDB 62 4e-10
1E58-A nrPDB 52 4e-07
4EO9-A nrPDB 52 6e-07
3PGM-A nrPDB 51 1e-06
1RII-A nrPDB 50 2e-06
6NRU-A nrPDB 50 2e-06
1FZT-A nrPDB 49 4e-06
3KKK-A nrPDB 47 2e-05
5PGM-D nrPDB 46 3e-05
5VVE-A nrPDB 44 2e-04
4ODI-A nrPDB 41 0.001
4EMB-A nrPDB 40 0.002
3GW8-A nrPDB 39 0.005
3D8H-A nrPDB 37 0.015
4PZA-A nrPDB 37 0.016
6BBQ-A nrPDB 37 0.017
2A5F-A nrPDB 36 0.042
5L3R-A nrPDB 35 0.054
3LVQ-E nrPDB 35 0.060
5NZV-F nrPDB 34 0.15
4YLG-A nrPDB 34 0.16
5UF8-A nrPDB 33 0.21
2B6H-A nrPDB 33 0.22
3AQ4-A nrPDB 33 0.28
3DM5-A nrPDB 33 0.31
3O47-A nrPDB 33 0.32
5CIO-A nrPDB 33 0.37
6DFF-C nrPDB 32 0.49
5Y64-B nrPDB 32 0.52
1J2J-A nrPDB 32 0.55
6FAE-B nrPDB 32 0.56
4C5U-A nrPDB 32 0.67
1G7S-A nrPDB 32 0.75
1Z6X-A nrPDB 31 0.96
4UZU-A nrPDB 31 1.3
5YPZ-A nrPDB 31 1.4
3LRP-A nrPDB 30 1.9
1F1O-A nrPDB 30 3.0
3LC3-A nrPDB 30 3.0
1X7A-C nrPDB 29 3.7
2RHQ-B nrPDB 29 4.3
3W15-A nrPDB 29 5.6
>1K6M-A nrPDB
Length = 432
Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/432 (98%), Positives = 431/432 (99%)
Query: 40 NSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNM 99
NSPTMVIMVGLPARGKTYISTKLTRYLN+IGTPTKVFNLGQYRREAVSYKNYEFFLPDNM
Sbjct: 1 NSPTMVIMVGLPARGKTYISTKLTRYLNFIGTPTKVFNLGQYRREAVSYKNYEFFLPDNM 60
Query: 100 EALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIES 159
EALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIES
Sbjct: 61 EALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIES 120
Query: 160 ICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIK 219
ICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIK
Sbjct: 121 ICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIK 180
Query: 220 IFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVR 279
IFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVR
Sbjct: 181 IFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVR 240
Query: 280 GKQYAYALANFIQSQGISSLKVWTSHMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTY 339
GKQYAYALANFIQSQGISSLKV+TS MKRTIQTAEALGVPYEQ+KALNEIDAGVCEEMTY
Sbjct: 241 GKQYAYALANFIQSQGISSLKVFTSRMKRTIQTAEALGVPYEQFKALNEIDAGVCEEMTY 300
Query: 340 EEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRC 399
EEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRC
Sbjct: 301 EEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRC 360
Query: 400 LLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAVNTHREKPENVDITRE 459
LLAYFLDKSS+ELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAVNTHREKPENVDITRE
Sbjct: 361 LLAYFLDKSSEELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAVNTHREKPENVDITRE 420
Query: 460 PEEALDTVPAHY 471
PEEALDTVPAHY
Sbjct: 421 PEEALDTVPAHY 432
>2BIF-A nrPDB
Length = 469
Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/466 (74%), Positives = 399/466 (85%), Gaps = 5/466 (1%)
Query: 7 ELTQTRLQKIWIPHSSGSSRLQ-RRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRY 65
ELTQ L+KI++P+S+G L +RG + TN PT+++MVGLPARGKTYIS KLTRY
Sbjct: 6 ELTQNPLKKIFMPYSNGRPALHASQRGVCM---TNCPTLIVMVGLPARGKTYISKKLTRY 62
Query: 66 LNWIGTPTKVFNLGQYRREAV-SYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEE 124
LN+IG PT+ FN+GQYRR+ V +YK++EFFLPDN E L+IRKQCALAAL DV +LS E
Sbjct: 63 LNFIGVPTREFNVGQYRRDMVKTYKSFEFFLPDNEEGLKIRKQCALAALNDVRKFLSEEG 122
Query: 125 GHVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDC 184
GHVAVFDATNTTRERR++I F +++GYK FF+ESIC DP +IA NI QVKLGSPDY++
Sbjct: 123 GHVAVFDATNTTRERRAMIFNFGEQNGYKTFFVESICVDPEVIAANIVQVKLGSPDYVNR 182
Query: 185 DREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYL 244
D ++ EDF++RIECYE +Y+ LDEE D LSYIKI DVG Y+VNRV DHIQSR VYYL
Sbjct: 183 DSDEATEDFMRRIECYENSYESLDEEQDRDLSYIKIMDVGQSYVVNRVADHIQSRIVYYL 242
Query: 245 MNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTS 304
MNIHVTPRSIYLCR GESELN++GRIGGD GLS RG++++ LA FI Q I LKV+TS
Sbjct: 243 MNIHVTPRSIYLCRAGESELNLKGRIGGDPGLSPRGREFSKHLAQFISDQNIKDLKVFTS 302
Query: 305 HMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPK 364
MKRTIQTAEAL VPYEQ+K LNEIDAGVCEEMTYEEIQ+HYP EFALRDQDKYRYRYPK
Sbjct: 303 QMKRTIQTAEALSVPYEQFKVLNEIDAGVCEEMTYEEIQDHYPLEFALRDQDKYRYRYPK 362
Query: 365 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLK 424
GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDK+++ELPYLKCPLHTVLK
Sbjct: 363 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKAAEELPYLKCPLHTVLK 422
Query: 425 LTPVAYGCKVESIYLNVEAVNTHREKPENVDITREPEEALDTVPAH 470
LTPVAYGCKVESI+LNV AVNTHR++P+NVDI+R EEAL TVPAH
Sbjct: 423 LTPVAYGCKVESIFLNVAAVNTHRDRPQNVDISRPSEEALVTVPAH 468
>2DWP-A nrPDB
Length = 520
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/450 (71%), Positives = 385/450 (85%), Gaps = 6/450 (1%)
Query: 7 ELTQTRLQKIWIPHSSGSSRLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYL 66
ELTQ+R+QKIW+P S L R G P+ TNSPT+++MVGLPARGKTYIS KLTRYL
Sbjct: 4 ELTQSRVQKIWVPVDHRPS-LPRSCG---PKLTNSPTVIVMVGLPARGKTYISKKLTRYL 59
Query: 67 NWIGTPTKVFNLGQYRREAVS-YKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEG 125
NWIG PTKVFN+G+YRREAV Y +Y FF PDN EA+++RKQCALAAL+DV +YL+ E G
Sbjct: 60 NWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGG 119
Query: 126 HVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCD 185
+AVFDATNTTRERR +IL FAKE+ +K FFIES+C+DP ++A NI +VK+ SPDY DC+
Sbjct: 120 QIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCN 179
Query: 186 REKVLEDFLKRIECYEVNYQPLD-EELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYL 244
+ ++DF+KRI CYE +YQPLD ++ D LS IK+ DVG R++VNRVQDHIQSR VYYL
Sbjct: 180 SAEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVNRVQDHIQSRIVYYL 239
Query: 245 MNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTS 304
MNIHV PR+IYLCRHGE+E N++GRIGGDSGLS RGK++A AL+ F++ Q + L+VWTS
Sbjct: 240 MNIHVQPRTIYLCRHGENEHNLQGRIGGDSGLSSRGKKFASALSKFVEEQNLKDLRVWTS 299
Query: 305 HMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPK 364
+K TIQTAEAL +PYEQWKALNEIDAGVCEE+TYEEI++ YPEE+ALR+QDKY YRYP
Sbjct: 300 QLKSTIQTAEALRLPYEQWKALNEIDAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPT 359
Query: 365 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLK 424
GESY+DLVQRLEPVIMELERQENVLVICHQAV+RCLLAYFLDKS++E+PYLKCPLHTVLK
Sbjct: 360 GESYQDLVQRLEPVIMELERQENVLVICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLK 419
Query: 425 LTPVAYGCKVESIYLNVEAVNTHREKPENV 454
LTPVAYGC+VESIYLNVE+V THRE+ E+
Sbjct: 420 LTPVAYGCRVESIYLNVESVCTHRERSEDA 449
>4D4L-A nrPDB
Length = 449
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/450 (71%), Positives = 385/450 (85%), Gaps = 6/450 (1%)
Query: 7 ELTQTRLQKIWIPHSSGSSRLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYL 66
ELTQ+R+QKIW+P S L R G P+ TNSPT+++MVGLPARGKTYIS KLTRYL
Sbjct: 4 ELTQSRVQKIWVPVDHRPS-LPRSCG---PKLTNSPTVIVMVGLPARGKTYISKKLTRYL 59
Query: 67 NWIGTPTKVFNLGQYRREAVS-YKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEG 125
NWIG PTKVFN+G+YRREAV Y +Y FF PDN EA+++RKQCALAAL+DV +YL+ E G
Sbjct: 60 NWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGG 119
Query: 126 HVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCD 185
+AVFDATNTTRERR +IL FAKE+ +K FFIES+C+DP ++A NI +VK+ SPDY DC+
Sbjct: 120 QIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCN 179
Query: 186 REKVLEDFLKRIECYEVNYQPLD-EELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYL 244
+ ++DF+KRI CYE +YQPLD ++ D LS IK+ DVG R++VNRVQDHIQSR VYYL
Sbjct: 180 SAEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVNRVQDHIQSRIVYYL 239
Query: 245 MNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTS 304
MNIHV PR+IYLCRHGE+E N++GRIGGDSGLS RGK++A AL+ F++ Q + L+VWTS
Sbjct: 240 MNIHVQPRTIYLCRHGENEHNLQGRIGGDSGLSSRGKKFASALSKFVEEQNLKDLRVWTS 299
Query: 305 HMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPK 364
+K TIQTAEAL +PYEQWKALNEIDAGVCEE+TYEEI++ YPEE+ALR+QDKY YRYP
Sbjct: 300 QLKSTIQTAEALRLPYEQWKALNEIDAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPT 359
Query: 365 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLK 424
GESY+DLVQRLEPVIMELERQENVLVICHQAV+RCLLAYFLDKS++E+PYLKCPLHTVLK
Sbjct: 360 GESYQDLVQRLEPVIMELERQENVLVICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLK 419
Query: 425 LTPVAYGCKVESIYLNVEAVNTHREKPENV 454
LTPVAYGC+VESIYLNVE+V THRE+ E+
Sbjct: 420 LTPVAYGCRVESIYLNVESVCTHRERSEDA 449
>5HTK-A nrPDB
Length = 505
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/430 (72%), Positives = 369/430 (85%), Gaps = 2/430 (0%)
Query: 26 RLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREA 85
R+ ++ S TNSPT+++M+GLPARGKTY+S KLTRYLNWIG PTKVFNLG YRREA
Sbjct: 22 RMSEKKCSWASYMTNSPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRREA 81
Query: 86 V-SYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLIL 144
V SYK+Y+FF DN EA++IRKQCAL AL+DV YL+ E G +AVFDATNTTRERR +IL
Sbjct: 82 VKSYKSYDFFRHDNEEAMKIRKQCALVALEDVKAYLTEENGQIAVFDATNTTRERRDMIL 141
Query: 145 QFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNY 204
FA+++ +KVFF+ES+C+DP +IA NI +VK+ SPDY + +RE V+EDFLKRIECY+V Y
Sbjct: 142 NFAEQNSFKVFFVESVCDDPDVIAANILEVKVSSPDYPERNRENVMEDFLKRIECYKVTY 201
Query: 205 QPLD-EELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESE 263
+PLD + D LS+IK+ +VG R++VNRVQD+IQS+ VYYLMNIHV PR+IYLCRHGESE
Sbjct: 202 RPLDPDNYDKDLSFIKVINVGQRFLVNRVQDYIQSKIVYYLMNIHVQPRTIYLCRHGESE 261
Query: 264 LNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQTAEALGVPYEQW 323
N+ G+IGGDSGLSVRGKQ+A AL F++ Q I+ LKVWTS +KRTIQTAE+LGVPYEQW
Sbjct: 262 FNLLGKIGGDSGLSVRGKQFAQALRKFLEEQEITDLKVWTSQLKRTIQTAESLGVPYEQW 321
Query: 324 KALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELE 383
K LNEIDAGVCEEMTY EI++ YPEEFALRDQ+KY YRYP GESY+DLVQRLEPVIMELE
Sbjct: 322 KILNEIDAGVCEEMTYAEIEKRYPEEFALRDQEKYLYRYPGGESYQDLVQRLEPVIMELE 381
Query: 384 RQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEA 443
RQ NVLVI HQAVMRCLLAYFLDK +DELPYL+CPLHT+ KLTPVAYGCKVE+I LNVEA
Sbjct: 382 RQGNVLVISHQAVMRCLLAYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVETIKLNVEA 441
Query: 444 VNTHREKPEN 453
VNTHR+KP N
Sbjct: 442 VNTHRDKPTN 451
>5HR5-A nrPDB
Length = 531
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/435 (71%), Positives = 370/435 (85%), Gaps = 2/435 (0%)
Query: 21 SSGSSRLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQ 80
+ S R+ ++ S TNSPT+++M+GLPARGKTY+S KLTRYLNWIG PTKVFNLG
Sbjct: 18 TKASLRISEKKCSWASYMTNSPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGV 77
Query: 81 YRREAV-SYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRER 139
YRR+AV SYK+Y+FF DN EA++IRKQCAL ALKDV YL+ E G +AVFDATNTTRER
Sbjct: 78 YRRQAVKSYKSYDFFRHDNEEAMKIRKQCALVALKDVKAYLTEESGQIAVFDATNTTRER 137
Query: 140 RSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIEC 199
R LIL FA+E+ +KVFF+ES+C+DP +IA NI +VK+ SPDY + +RE V++DFLKRIEC
Sbjct: 138 RDLILNFAEENSFKVFFVESVCDDPDVIAANILEVKVSSPDYPERNRENVMDDFLKRIEC 197
Query: 200 YEVNYQPLD-EELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCR 258
Y+V YQPLD + D LS+IK+ +VG R++VN+VQD+IQS+ VYYLMNIHV PR+IYLCR
Sbjct: 198 YKVTYQPLDPDSHDKDLSFIKVINVGQRFLVNKVQDYIQSKIVYYLMNIHVHPRTIYLCR 257
Query: 259 HGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQTAEALGV 318
HGESE N+ G+IGGDSGLSVRGKQ+A AL F++ Q I+ LKVWTS +KRTIQTAE+LGV
Sbjct: 258 HGESEFNLLGKIGGDSGLSVRGKQFAQALRKFLEEQEIADLKVWTSQLKRTIQTAESLGV 317
Query: 319 PYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPV 378
YEQWK LNEIDAGVCEEMTY EIQE YP+EFALRD++KY YRYP GESY+DLVQRLEPV
Sbjct: 318 TYEQWKILNEIDAGVCEEMTYAEIQEQYPDEFALRDEEKYLYRYPGGESYQDLVQRLEPV 377
Query: 379 IMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIY 438
IMELERQ NVLVI HQAVMRCLLAYFLDK +DELPYL+CPLHT+ KLTPVAYGCKVE+I
Sbjct: 378 IMELERQGNVLVISHQAVMRCLLAYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVETIK 437
Query: 439 LNVEAVNTHREKPEN 453
LNVEAVNTHR+KP N
Sbjct: 438 LNVEAVNTHRDKPTN 452
>1C7Z-A nrPDB
Length = 191
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/190 (97%), Positives = 189/190 (99%)
Query: 252 RSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311
RSIYLCRHGESELN+RGRIGGDSGLS RGKQYAYALANFI+SQGISSLKVWTSHMKRTIQ
Sbjct: 2 RSIYLCRHGESELNLRGRIGGDSGLSARGKQYAYALANFIRSQGISSLKVWTSHMKRTIQ 61
Query: 312 TAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDL 371
TAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDL
Sbjct: 62 TAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDL 121
Query: 372 VQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYG 431
VQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYG
Sbjct: 122 VQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYG 181
Query: 432 CKVESIYLNV 441
C+VESIYLNV
Sbjct: 182 CRVESIYLNV 191
>4IJ6-A nrPDB
Length = 211
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 11/173 (6%)
Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRT-- 309
+ L R ESE N GR G D LS RGK+ A LA + + + +++S +KRT
Sbjct: 4 LILVRAAESEWNPVGRYQGLLDPDLSERGKKQAKLLAQELSREHLDV--IYSSPLKRTYL 61
Query: 310 --IQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGES 367
++ AEA + + + EID G+ M EE+ E YPE+F ++ ++ + GES
Sbjct: 62 TALEIAEAKNLEVIKEDRIIEIDHGMWSGMLVEEVMEKYPEDFRRWVEEPHKVEFQGGES 121
Query: 368 YEDLVQRLEPVIMELERQ---ENVLVICHQAVMRCLLAYFLDKSSDELPYLKC 417
+ R++ + E+ ++ + V+V+ H MR + L + C
Sbjct: 122 LASVYNRVKGFLEEVRKRHWNQTVVVVSHTVPMRAMYCALLGVDLSKFWSFGC 174
>1E58-A nrPDB
Length = 249
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 39/204 (19%)
Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311
+ L RHGES+ N R G D LS +G A A ++ +G S +TS +KR I
Sbjct: 5 LVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGYSFDFAYTSVLKRAIH 64
Query: 312 T-------AEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEE--------FAL---- 352
T + +P E+ LNE G + + E E Y +E FA+
Sbjct: 65 TLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPE 124
Query: 353 --RDQDKY-----RY------RYPKGESYEDLVQRLEP-----VIMELERQENVLVICHQ 394
+D ++Y RY P ES + R+ P ++ ++ E V++ H
Sbjct: 125 LTKDDERYPGHDPRYAKLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVIIAAHG 184
Query: 395 AVMRCLLAYFLDKSSDELPYLKCP 418
+R L+ Y + S +E+ L P
Sbjct: 185 NSLRALVKYLDNMSEEEILELNIP 208
>4EO9-A nrPDB
Length = 268
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 91/235 (38%), Gaps = 47/235 (20%)
Query: 253 SIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTI 310
++ L RHGES+ N R G D GL+ +G+ A + + ++TS ++R I
Sbjct: 29 TLILLRHGESDWNARNLFTGWVDVGLTDKGRAEAVRSGELLAEHNLLPDVLYTSLLRRAI 88
Query: 311 -------QTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRY--- 360
TA+ L +P + LNE G + + + Y EE + + Y
Sbjct: 89 TTAHLALDTADWLWIPVRRSWRLNERHYGALQGLDKAVTKARYGEERFMAWRRSYDTPPP 148
Query: 361 --------------RY------PKGESYEDLVQRLEP-----VIMELERQENVLVICHQA 395
RY P E D+V R P ++ +L VL++ H
Sbjct: 149 PIEKGSEFSQDADPRYTDIGGGPLTECLADVVTRFLPYFTDVIVPDLRTGRTVLIVAHGN 208
Query: 396 VMRCLLAYFLDKSSDELPYLKCPLHTVLK------LTPVAYGCKVESIYLNVEAV 444
+R L+ + + S DE+ L P L+ L PV G YL+ EA
Sbjct: 209 SLRALVKHLDEMSDDEVVGLNVPTGIPLRYDLDADLRPVVPG----GTYLDPEAA 259
>3PGM-A nrPDB
Length = 244
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 39/208 (18%)
Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311
+ L RHG+SE N + G D LS +G+Q A ++ +G++ L +TS + R IQ
Sbjct: 3 LVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKGVNVLVDYTSKLSRAIQ 62
Query: 312 T-------AEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEE--------------- 349
T A+ L +P + LNE G + + + + EE
Sbjct: 63 TANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAQTLKKFGEEKFNTYRRSFDVPPPP 122
Query: 350 ------FALRDQDKYRY----RYPKGESYEDLVQRLEP----VIMELERQENVLVICHQA 395
F+ + ++Y+Y P+ ES ++ RL P VI +L + + ++ H
Sbjct: 123 IDASSPFSQKGDERYKYVDPNVLPETESLALVIDRLLPYWQDVIAKLVGKTS-MIAAHGN 181
Query: 396 VMRCLLAYFLDKSSDELPYLKCPLHTVL 423
+R L+ + S ++ L P T+L
Sbjct: 182 SLRGLVKHLEGISDADIAKLNIPPGTIL 209
>1RII-A nrPDB
Length = 265
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 82/209 (39%), Gaps = 37/209 (17%)
Query: 253 SIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTI 310
S+ L RHGES+ N G D GL+ +G+ A I + ++TS ++R I
Sbjct: 6 SLVLLRHGESDWNALNLFTGWVDVGLTDKGQAEAVRSGELIAEHDLLPDVLYTSLLRRAI 65
Query: 311 QT-------AEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRY--- 360
T A+ L +P + LNE G + + E + Y EE + + Y
Sbjct: 66 TTAHLALDSADRLWIPVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSYDTPPP 125
Query: 361 --------------RY------PKGESYEDLVQRLEP-----VIMELERQENVLVICHQA 395
RY P E D+V R P ++ +L + VL++ H
Sbjct: 126 PIERGSQFSQDADPRYADIGGGPLTECLADVVARFLPYFTDVIVGDLRVGKTVLIVAHGN 185
Query: 396 VMRCLLAYFLDKSSDELPYLKCPLHTVLK 424
+R L+ + S DE+ L P L+
Sbjct: 186 SLRALVKHLDQMSDDEIVGLNIPTGIPLR 214
>6NRU-A nrPDB
Length = 206
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 82/173 (47%), Gaps = 13/173 (7%)
Query: 254 IYLCRHGESELNIRGRIGGDSG--LSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311
++L RHGE++ N+ G G + L+ RG + A L + +S V S ++R
Sbjct: 6 LWLIRHGETQANVDGLYSGHAPTPLTARGIEQAQNLHTLLDD--VSFDLVLCSELERAQH 63
Query: 312 TAEAL----GVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYP-KGE 366
TA + +P LNE+ G E + ++ + E ++ D +++ P GE
Sbjct: 64 TARLVLSDRQLPVHIIPELNEMFFGDWEMRHHRDLMQEDAENYSAWCND-WQHAIPTNGE 122
Query: 367 SYEDLVQRLEPVIMEL---ERQENVLVICHQAVMRCLLAYFLDKSSDELPYLK 416
++ QR+E I L + +N+L++ HQ V+ L+A + ++ + + +
Sbjct: 123 GFQAFSQRVERFIARLSEYQHYQNILIVSHQGVLSLLIARLIGMPAESMWHFR 175
>1FZT-A nrPDB
Length = 211
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 92/225 (40%), Gaps = 37/225 (16%)
Query: 245 MNIHVTPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVW 302
M P + L RHGESE N G D LS G + A ++S+G +
Sbjct: 1 MTTEAAPNLLVLTRHGESEWNKLNLFTGWKDPALSETGIKEAKLGGERLKSRGYKFDIAF 60
Query: 303 TSHMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRY 362
TS ++R +T + + L E+ E + E++ E Y + ++D R ++
Sbjct: 61 TSALQRAQKTCQII---------LEEVGEPNLETIKSEKLNERYYGDLQGLNKDDARKKW 111
Query: 363 ----------------PKGESYEDLVQRLEP-----VIMELERQENVLVICHQAVMRCLL 401
P GES +D +R+ P ++ + + E VL+ H +R L+
Sbjct: 112 GAEQVQIWRRSYDIAPPNGESLKDTAERVLPYYKSTIVPHILKGEKVLIAAHGNSLRALI 171
Query: 402 AYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAVNT 446
+ D++ +K L T + P+ Y + Y++ E ++
Sbjct: 172 MDLEGLTGDQI--VKRELATGV---PIVYHLDKDGKYVSKELIDN 211
>3KKK-A nrPDB
Length = 258
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 39/209 (18%)
Query: 249 VTPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHM 306
+T ++ L RHGES N + G D LS +G++ A A +++ + V+TS +
Sbjct: 9 MTTYTLVLLRHGESTWNKENKFTGWTDVPLSEKGEEEAIAAGKYLKEKNFKFDVVYTSVL 68
Query: 307 KRTI-------QTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEE---------- 349
KR I +TA+ L VP + LNE G + + E + Y EE
Sbjct: 69 KRAICTAWNVLKTADLLHVPVVKTWRLNERHCGSLQGLNKSETAKKYGEEQVKIWRRSYD 128
Query: 350 FALRDQDKYRYRYPK---------------GESYEDLVQRLEP-----VIMELERQENVL 389
DK R+P E +D V+R+ P + ++ + V+
Sbjct: 129 IPPPKLDKEDNRWPGHNVVYKNVPKDALPFTECLKDTVERVLPFWFDHIAPDILANKKVM 188
Query: 390 VICHQAVMRCLLAYFLDKSSDELPYLKCP 418
V H +R L+ + + S ++ L P
Sbjct: 189 VAAHGNSLRGLVKHLDNLSEADVLELNIP 217
>5PGM-D nrPDB
Length = 246
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 39/204 (19%)
Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311
+ L RHG+SE N + G D LS +G+Q A ++ + + ++TS + R IQ
Sbjct: 3 LVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKKVYPDVLYTSKLSRAIQ 62
Query: 312 T-------AEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEE--------------- 349
T A+ L +P + LNE G + E + + EE
Sbjct: 63 TANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKFGEEKFNTYRRSFDVPPPP 122
Query: 350 ------FALRDQDKYRY----RYPKGESYEDLVQRLEP-----VIMELERQENVLVICHQ 394
F+ + ++Y+Y P+ ES ++ RL P + +L + V++ H
Sbjct: 123 IDASSPFSQKGDERYKYVDPNVLPETESLALVIDRLLPYWQDVIAKDLLSGKTVMIAAHG 182
Query: 395 AVMRCLLAYFLDKSSDELPYLKCP 418
+R L+ + S ++ L P
Sbjct: 183 NSLRGLVKHLEGISDADIAKLNIP 206
>5VVE-A nrPDB
Length = 258
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 82/205 (40%), Gaps = 41/205 (20%)
Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTI- 310
+ L RHGESE N + G D GLS G + A + +G +TS +KR I
Sbjct: 13 LVLIRHGESEWNKENKFTGWYDCGLSETGLKEAKEAGEILLKEGYEFDLCYTSFLKRAIK 72
Query: 311 ------QTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEF-------------A 351
+T +A+ +P + LNE G + + + E + EE A
Sbjct: 73 TLWIALETMDAMYLPVVKHWRLNERHYGALQGLNKTQTAEKHGEEQVKIWRRSYDIPPPA 132
Query: 352 LRDQDKYRY-------------RYPKGESYEDLVQRLEP-----VIMELERQENVLVICH 393
L D+ RY PK ES + V R+ P + ++ + VL+ H
Sbjct: 133 LEVTDE-RYPGHERKYQGLTQEELPKTESLKLTVDRVLPYWNDVIAPSVKEGKRVLIAAH 191
Query: 394 QAVMRCLLAYFLDKSSDELPYLKCP 418
+R L+ Y + S +E+ L P
Sbjct: 192 GNSLRALVKYLDNISEEEIVELNIP 216
>4ODI-A nrPDB
Length = 281
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 82/211 (38%), Gaps = 46/211 (21%)
Query: 243 YLMNIHVTPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLK 300
+ N+ ++ L RHGES N R G D LS G+Q A A ++ +G
Sbjct: 10 FFGNMAKAKYTLVLIRHGESTWNKENRFTGWTDVPLSPVGEQEAVEAAKALKEKGFEFDV 69
Query: 301 VWTSHMKRTIQT-------AEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEE---F 350
+TS ++R + T + +P + LNE G + + E + +E
Sbjct: 70 AYTSVLQRAVVTCWTVLKGTDMCHIPVKSSWRLNERHYGALQGLNKAETAAKHGDEQVKI 129
Query: 351 ALRDQD-------KYRYRYPKG---------------ESYEDLVQR--------LEPVIM 380
R D K R+P E +D V+R + P IM
Sbjct: 130 WRRSYDIPPPPLEKSDKRWPGNDAVYKMVPNEALPLTECLKDTVERVLPFWFDHIAPSIM 189
Query: 381 ELERQENVLVICHQAVMRCLLAYFLDKSSDE 411
E +R VLV H +R L+ + LDK SDE
Sbjct: 190 EGKR---VLVAAHGNSLRGLVKH-LDKMSDE 216
>4EMB-A nrPDB
Length = 274
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 80/205 (39%), Gaps = 41/205 (20%)
Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311
+ L RHGESE N G D LS +G A ++ +G S ++S + R
Sbjct: 30 LVLVRHGESEWNKENLFTGWTDVKLSDKGIDEAVEAGLLLKQEGYSFDIAFSSLLSRAND 89
Query: 312 TAE----ALGVPY----EQWKALNEIDAGVCEEMTYEEIQEHYPEEFAL----------- 352
T LG Y + W+ LNE G + + E Y E+ L
Sbjct: 90 TLNIILRELGQSYISVKKTWR-LNERHYGALQGLNKSETAAKYGEDKVLIWRRSYDVPPM 148
Query: 353 ---RDQDKY-----RYRY------PKGESYEDLVQRLEP-----VIMELERQENVLVICH 393
D++ RY++ P E +D V R+ P + E+ + V+V H
Sbjct: 149 SLDESDDRHPIKDPRYKHIPKRELPSTECLKDTVARVIPYWTDEIAKEVLEGKKVIVAAH 208
Query: 394 QAVMRCLLAYFLDKSSDELPYLKCP 418
+R L+ YF + S +++ L P
Sbjct: 209 GNSLRALVKYFDNLSEEDVLKLNIP 233
>3GW8-A nrPDB
Length = 257
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 74/196 (37%), Gaps = 40/196 (20%)
Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311
+ L RHGES N R G D L+ +G + A ++ G + +TS +KR I+
Sbjct: 12 LVLIRHGESTWNKENRFTGWVDVDLTEQGNREARQAGQLLKEAGYTFDIAYTSVLKRAIR 71
Query: 312 T-------AEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKY------ 358
T + + VP LNE G + E Y +E L + Y
Sbjct: 72 TLWHVQDQMDLMYVPVVHSWRLNERHYGALSGLNKAETAAKYGDEQVLVWRRSYDTPPPA 131
Query: 359 -------------------RYRYPKGESYEDLVQRLEPVIME-----LERQENVLVICHQ 394
R + P E +D V R+ P+ E ++ + VL+ H
Sbjct: 132 LEPGDERAPYADPRYAKVPREQLPLTECLKDTVARVLPLWNESIAPAVKAGKQVLIAAHG 191
Query: 395 AVMRCLLAYFLDKSSD 410
+R L+ Y LD SD
Sbjct: 192 NSLRALIKY-LDGISD 206
>3D8H-A nrPDB
Length = 267
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 93/240 (38%), Gaps = 51/240 (21%)
Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311
+ L RHGESE N R G D LS +G A + +G V+TS +KR I
Sbjct: 23 LTLIRHGESEWNKENRFTGWTDVSLSEQGVSEAIEAGRMLLEKGFKFDVVYTSVLKRAIM 82
Query: 312 TA----EALG---VPYEQWKALNEIDAGVCEEMTYEEIQEHYPEE---FALRDQD----- 356
T + LG P LNE G + + E + E+ R D
Sbjct: 83 TTWTVLKELGNINCPIINHWRLNERHYGALQGLNKSETASKFGEDQVKIWRRSFDVPPPV 142
Query: 357 --KYRYRYP------KG---------ESYEDLVQRLEP-----VIMELERQENVLVICHQ 394
K R+P KG E +D V+R++P + + ++VLV H
Sbjct: 143 LEKSDPRWPGNELIYKGICPSCLPTTECLKDTVERVKPYFEDVIAPSIMSGKSVLVSAHG 202
Query: 395 AVMRCLLAYFLDKSSDE------LPYLKCP----LHTVLKLTPVAYGCKVESIYLNVEAV 444
+R LL Y L+ + E +P CP L LK+T Y E + +EAV
Sbjct: 203 NSLRALL-YLLEGMTPEQILEVNIP-TACPLVLELDDYLKVTKKYYLISEEELKAKMEAV 260
>4PZA-A nrPDB
Length = 223
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 11/142 (7%)
Query: 252 RSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRT 309
R + + RHG+++ N+ R+ G D+ LS G+ A A A + + L + +S ++R
Sbjct: 4 RRLVMLRHGQTDYNVGSRMQGQLDTELSELGRTQAVAAAEVLGKR--QPLLIVSSDLRRA 61
Query: 310 IQTA----EALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYP-EEFALRDQDKYRYRYPK 364
TA E G+ L E G + +T+ +I P A R+ +
Sbjct: 62 YDTAVKLGERTGLVVRVDTRLRETHLGDWQGLTHAQIDADAPGARLAWREDATWAPH--G 119
Query: 365 GESYEDLVQRLEPVIMELERQE 386
GES D+ R P++ EL E
Sbjct: 120 GESRVDVAARSRPLVAELVASE 141
>6BBQ-A nrPDB
Length = 520
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 26 RLQRRRGSSIPQ-FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRRE 84
R+ ++G + + F N ++M+GL A GKT I KL + PT FN+ E
Sbjct: 342 RIANKKGKVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNV-----E 396
Query: 85 AVSYKNYEFFLPD 97
V+YKN +F + D
Sbjct: 397 TVTYKNVKFNVWD 409
>2A5F-A nrPDB
Length = 175
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 13/100 (13%)
Query: 38 FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97
F N ++M+GL A GKT I KL + PT FN+ E V+YKN +F + D
Sbjct: 9 FGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNV-----ETVTYKNVKFNVWD 63
Query: 98 NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTR 137
+IR +Y + +G + V D + R
Sbjct: 64 VGGQDKIRPLW--------RHYYTGTQGLIFVVDCADRDR 95
>5L3R-A nrPDB
Length = 301
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 68/179 (37%), Gaps = 40/179 (22%)
Query: 37 QFTNS-PTMVIMVGLPARGKTYISTKLTRYLN---------------------------- 67
QF S PT++++ GL GKT + KL YL
Sbjct: 100 QFAKSGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQ 159
Query: 68 ------WIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLS 121
GT K ++ + + N + + D LQI K + LKDV +L+
Sbjct: 160 VGVPVYTAGTDVKPADIAKQGLKEAKKNNVDVVIMDTAGRLQIDKGM-MDELKDVKKFLN 218
Query: 122 HEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDP-GIIAENIRQVKLGSP 179
E + V DA T +E +L+ F E G + + D G A ++++V G P
Sbjct: 219 PTE-VLLVVDAM-TGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVS-GKP 274
>3LVQ-E nrPDB
Length = 497
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 34 SIPQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEF 93
I +N ++M+GL A GKT I KL + PT FN+ E V+YKN +F
Sbjct: 314 GIEGLSNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNV-----ETVTYKNVKF 368
Query: 94 FLPD 97
+ D
Sbjct: 369 NVWD 372
>5NZV-F nrPDB
Length = 181
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 13/100 (13%)
Query: 38 FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97
F N ++MVGL GKT + KL PT FN+ E V YKN F + D
Sbjct: 13 FGNKEMRILMVGLDGAGKTTVLYKLKLGEVITTIPTIGFNV-----ETVQYKNISFTVWD 67
Query: 98 NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTR 137
+IR +Y + EG + V D+ + +R
Sbjct: 68 VGGQDRIRSLW--------RHYYRNTEGVIFVVDSNDRSR 99
>4YLG-A nrPDB
Length = 173
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 14/128 (10%)
Query: 32 GSSIPQFTNSPTM-VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKN 90
GS + + M ++MVGL A GKT I KL PT FN+ E V YKN
Sbjct: 2 GSWLSKLLGKKEMRILMVGLDAAGKTSILYKLKLGEIVTTIPTIGFNV-----ETVEYKN 56
Query: 91 YEFFLPDNMEALQIR--------KQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSL 142
F + D +IR A+ + D ++ E + N R ++
Sbjct: 57 ISFTVWDVGGQDKIRPLWRHYYQNTQAIIFVVDSNDRDRIGEAREELMKMLNEDEMRNAI 116
Query: 143 ILQFAKEH 150
+L FA +H
Sbjct: 117 LLVFANKH 124
>5UF8-A nrPDB
Length = 181
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 38 FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97
F N ++MVGL A GKT I KL PT FN+ E V YKN F + D
Sbjct: 13 FGNKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWD 67
>2B6H-A nrPDB
Length = 192
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 14/112 (12%)
Query: 31 RGSSIPQFTNSPTM-VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYK 89
RGS + M ++MVGL A GKT I KL PT FN+ E V YK
Sbjct: 17 RGSLFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYK 71
Query: 90 NYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRS 141
N F + D +IR +Y + +G + V D+ + R + S
Sbjct: 72 NICFTVWDVGGQDKIRPLW--------RHYFQNTQGLIFVVDSNDRERVQES 115
>3AQ4-A nrPDB
Length = 184
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 13/100 (13%)
Query: 38 FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97
F ++MVGL A GKT I KL PT FN+ E V YKN F + D
Sbjct: 16 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWD 70
Query: 98 NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTR 137
+IR +Y + +G + V D+ + R
Sbjct: 71 VGGQDKIRPLW--------RHYFQNTQGLIFVVDSNDRDR 102
>3DM5-A nrPDB
Length = 443
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 16/115 (13%)
Query: 37 QFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYR-------REAVSYK 89
+ PT+++MVG+ GKT KL RY G V +R R+ +
Sbjct: 95 EIKEKPTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRY 154
Query: 90 NYEFFL-PDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLI 143
+ E F P +A+++ K+ +Y + + + D +E ++LI
Sbjct: 155 HIEVFGNPQEKDAIKLAKEGV--------DYFKSKGVDIIIVDTAGRHKEDKALI 201
>3O47-A nrPDB
Length = 329
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 13/100 (13%)
Query: 38 FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97
F ++MVGL A GKT I KL PT FN+ E V YKN F + D
Sbjct: 161 FGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWD 215
Query: 98 NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTR 137
+IR +Y + +G + V D+ + R
Sbjct: 216 VGGQDKIRPLW--------RHYFQNTQGLIFVVDSNDRER 247
>5CIO-A nrPDB
Length = 793
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 15/100 (15%)
Query: 96 PDNMEALQIRKQCAL-AALKDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKV 154
P + AL + C L AAL+ L+H EGH++V R + +LQ A HG
Sbjct: 483 PSSHGALSEEQACGLQAALRPEAAELAHREGHLSV------ERHQGVWLLQLAGSHGLIC 536
Query: 155 FFIESI-----CNDPGII---AENIRQVKLGSPDYIDCDR 186
+ + P II A N+R +L + I R
Sbjct: 537 HGLNVVNRALTAQPPAIINEAARNLRHAQLKQQNDIAIRR 576
>6DFF-C nrPDB
Length = 193
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 15/99 (15%)
Query: 41 SPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNME 100
S ++MVGL A GKT I KL PT FN+ E V YKN F + D
Sbjct: 28 SEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWDVGG 82
Query: 101 ALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRER 139
+IR +Y + +G + V D+ + RER
Sbjct: 83 LDKIRPLW--------RHYFQNTQGLIFVVDSND--RER 111
>5Y64-B nrPDB
Length = 262
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311
+ L RHGES N+ R G D+ LS G + A ++ G +TS KR I+
Sbjct: 6 LVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQKRAIR 65
Query: 312 TAEALGVPYEQWKALNEID 330
T W L+ ID
Sbjct: 66 TL---------WTVLDAID 75
>1J2J-A nrPDB
Length = 166
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 45 VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQI 104
++MVGL A GKT I KL PT FN+ E V YKN F + D +I
Sbjct: 5 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWDVGGLDKI 59
Query: 105 RKQCALAALKDVHNYLSHEEGHVAVFDATNTTRER 139
R +Y + +G + V D+ + RER
Sbjct: 60 RPLW--------RHYFQNTQGLIFVVDSND--RER 84
>6FAE-B nrPDB
Length = 213
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 45 VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQI 104
++MVGL A GKT I KL PT FN+ E V YKN F + D +I
Sbjct: 52 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWDVGGQDKI 106
Query: 105 RKQCALAALKDVHNYLSHEEGHVAVFDATNTTRER 139
R +Y + +G + V D+ + RER
Sbjct: 107 RPLW--------RHYFQNTQGLIFVVDSND--RER 131
>4C5U-A nrPDB
Length = 707
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 384 RQENVLVICHQAVMRCLLAYFLDK----SSDELPYLKCPLHTVLKLTPVAYGC 432
R+ N L ++++RCLLA K S DELP +L+L YGC
Sbjct: 112 RRTNRLSELQESLIRCLLAGVFTKGCAPSVDELPATATRSAMLLRLNSFTYGC 164
>1G7S-A nrPDB
Length = 594
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 12/133 (9%)
Query: 80 QYRREAVSYKNYEFFLPDNMEALQIRKQCALAALKD--VHNYLSHEEGHVAVFDATNTTR 137
QY RE + + P L+++++ L D +++ + ++ +A+ + +
Sbjct: 218 QYLREQLKIEEDS---PARGTILEVKEETGLGMTIDAVIYDGILRKDDTIAMMTSKDVIS 274
Query: 138 ER-RSLI----LQFAKEHGYKVFFIESICNDPGI--IAENIRQVKLGSPDYIDCDREKVL 190
R RSL+ L+ +E K ++ + GI +A I V GSP + D EKV
Sbjct: 275 TRIRSLLKPRPLEEMRESRKKFQKVDEVVAAAGIKIVAPGIDDVMAGSPLRVVTDPEKVR 334
Query: 191 EDFLKRIECYEVN 203
E+ L IE +++
Sbjct: 335 EEILSEIEDIKID 347
>1Z6X-A nrPDB
Length = 180
Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
Query: 38 FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97
F ++MVGL A GKT I KL PT FN+ E V YKN F + D
Sbjct: 13 FGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNICFTVWD 67
Query: 98 NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRER 139
+IR +Y + +G + V D+ + RER
Sbjct: 68 VGGQDRIRPLW--------KHYFQNTQGLIFVVDSND--RER 99
>4UZU-A nrPDB
Length = 513
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 62 LTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQIRKQCALAALKD------ 115
+T NW N+ +R +AV + + FF PD + ++ + L + +
Sbjct: 210 VTELKNWGKWYVNTTNIDGFRLDAVKHIKFSFF-PDWLSYVRSQTGKPLFTVGEYWSYDI 268
Query: 116 --VHNYLSHEEGHVAVFDA 132
+HNY++ +G +++FDA
Sbjct: 269 NKLHNYITKTDGTMSLFDA 287
>5YPZ-A nrPDB
Length = 492
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 15/106 (14%)
Query: 58 ISTKLTRYLNW-IGTPTKVFNLGQYRREAVSYKNYEF---FLPDNMEALQIRKQCALAAL 113
+ST + ++NW GT T++F +Y + NYEF ++P C A+
Sbjct: 67 MSTNASEFINWGAGTSTRIFFTRKYCISTGTQGNYEFSKDYIP-----------CEEPAI 115
Query: 114 KDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIES 159
+ VA + + ER IL F K + + F+ +
Sbjct: 116 LSNSDLKIDRIDFVATDNTVGSAIERVDFILTFDKSNANESFYFSN 161
>3LRP-A nrPDB
Length = 181
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 19/104 (18%)
Query: 38 FTNSPTMVIMVGLPARGKTYI--STKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFL 95
F ++MVGL A GKT I KL + I PT FN+ E V ++N F +
Sbjct: 13 FQKKDVRILMVGLDAAGKTTILYKVKLGEVVTTI--PTIGFNV-----ETVEFRNISFTV 65
Query: 96 PDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRER 139
D +IR +Y S+ +G + V D+ + RER
Sbjct: 66 WDVGGQDKIRPLW--------RHYYSNTDGLIFVVDSND--RER 99
>1F1O-A nrPDB
Length = 431
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 285 YALANFIQSQGISSLKVWTSHMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQE 344
Y L F S + +L V+ +MKR + LG+ Y Q L ID G+ E Y+ +Q
Sbjct: 322 YMLNRF--SNIVKNLTVFPENMKRNMD--RTLGLIYSQRVLLALIDTGLTREEAYDTVQP 377
Query: 345 HYPEEFALRDQDKYRYRYPKGESYEDLVQRLEP 377
E A Q +R E+ E + RL P
Sbjct: 378 KAME--AWEKQVPFRELV---EAEEKITSRLSP 405
>3LC3-A nrPDB
Length = 235
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Query: 20 HSSGSSRLQRRRGSSIPQFTNSPTMVIMVGL-------PARGKTYISTKLTRYLNWIGTP 72
H G Q G P T + G+ +GK I TK++RY+NWI
Sbjct: 174 HEGGRDSCQGDSGG--PHVTEVEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEK 231
Query: 73 TKV 75
TK+
Sbjct: 232 TKL 234
>1X7A-C nrPDB
Length = 235
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Query: 20 HSSGSSRLQRRRGSSIPQFTNSPTMVIMVGL-------PARGKTYISTKLTRYLNWIGTP 72
H G Q G P T + G+ +GK I TK++RY+NWI
Sbjct: 174 HEGGKDSCQGDSGG--PHVTEVEGTSFLTGIISWGEECAVKGKYGIYTKVSRYVNWIKEK 231
Query: 73 TKV 75
TK+
Sbjct: 232 TKL 234
>2RHQ-B nrPDB
Length = 795
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 29/51 (56%)
Query: 331 AGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIME 381
AG+ + +TY + + + ++FAL+++ P E++ L Q L P ++E
Sbjct: 509 AGLNQAITYSLVSKDHAKDFALQERPTISLLMPMSEAHATLRQSLLPHLIE 559
>3W15-A nrPDB
Length = 368
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 11/115 (9%)
Query: 289 NFIQSQGISSLKVWTSHMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEH--- 345
NF+ S S+K+W+ K+++ T P E K ++ ++A + ++ ++ I ++
Sbjct: 121 NFLSSSWDGSIKIWSPLRKQSLMTLTPR--PLEITKMVDPLNAIILKKKSFTGISKNRNC 178
Query: 346 -YPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRC 399
Y +F+ DQ+ G SY L P + Q N LV + C
Sbjct: 179 VYQAQFSPHDQN--LVLSCSGNSYASLFDIRLP---SGKNQNNFLVHSGLEALTC 228
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
2BIF-A nrPDB 745 0.0
1K6M-A nrPDB 744 0.0
4D4L-A nrPDB 714 0.0
2DWP-A nrPDB 713 0.0
5HTK-A nrPDB 690 0.0
5HR5-A nrPDB 679 0.0
1C7Z-A nrPDB 293 1e-79
4EO9-A nrPDB 227 7e-60
1RII-A nrPDB 220 9e-58
1FZT-A nrPDB 217 7e-57
4ODI-A nrPDB 216 3e-56
3KKK-A nrPDB 212 2e-55
5PGM-D nrPDB 206 2e-53
1E58-A nrPDB 206 3e-53
5VVE-A nrPDB 202 3e-52
3PGM-A nrPDB 200 1e-51
4IJ6-A nrPDB 181 4e-46
6NRU-A nrPDB 178 5e-45
Sequences not found previously or not previously below threshold:
3GW8-A nrPDB 197 1e-50
4EMB-A nrPDB 188 5e-48
5Y64-B nrPDB 185 3e-47
3D8H-A nrPDB 182 3e-46
5UM0-A nrPDB 180 2e-45
3NFY-A nrPDB 160 1e-39
4PZA-A nrPDB 91 8e-19
3E9D-A nrPDB 84 1e-16
3HJG-A nrPDB 78 1e-14
3LG2-A nrPDB 73 2e-13
3R7A-A nrPDB 64 1e-10
3DCY-A nrPDB 64 1e-10
2YN2-A nrPDB 59 4e-09
3F2I-A nrPDB 49 5e-06
6BBQ-A nrPDB 44 1e-04
3LVQ-E nrPDB 42 4e-04
2A5F-A nrPDB 41 0.001
4YLG-A nrPDB 36 0.028
3DM5-A nrPDB 35 0.056
6FAE-B nrPDB 35 0.065
5UF8-A nrPDB 35 0.065
3O47-A nrPDB 35 0.067
6DFF-C nrPDB 35 0.082
1J2J-A nrPDB 35 0.082
5NZV-F nrPDB 35 0.084
3AQ4-A nrPDB 35 0.10
2B6H-A nrPDB 33 0.22
6E3B-A nrPDB 33 0.30
1Z6X-A nrPDB 33 0.38
3LRP-A nrPDB 32 0.67
4XRP-A nrPDB 32 0.69
4UZU-A nrPDB 31 1.1
4C0E-A nrPDB 31 1.2
1DJ3-A nrPDB 31 1.2
2YVU-A nrPDB 31 1.2
2IYT-A nrPDB 31 1.3
1LFP-A nrPDB 30 1.8
5L3R-A nrPDB 30 2.0
2SHK-A nrPDB 29 5.0
2V3C-C nrPDB 28 6.6
>2BIF-A nrPDB
Length = 469
Score = 745 bits (1923), Expect = 0.0, Method: Composition-based stats.
Identities = 347/466 (74%), Positives = 398/466 (85%), Gaps = 5/466 (1%)
Query: 7 ELTQTRLQKIWIPHSSGSSRLQ-RRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRY 65
ELTQ L+KI++P+S+G L +RG TN PT+++MVGLPARGKTYIS KLTRY
Sbjct: 6 ELTQNPLKKIFMPYSNGRPALHASQRGVC---MTNCPTLIVMVGLPARGKTYISKKLTRY 62
Query: 66 LNWIGTPTKVFNLGQYRREAV-SYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEE 124
LN+IG PT+ FN+GQYRR+ V +YK++EFFLPDN E L+IRKQCALAAL DV +LS E
Sbjct: 63 LNFIGVPTREFNVGQYRRDMVKTYKSFEFFLPDNEEGLKIRKQCALAALNDVRKFLSEEG 122
Query: 125 GHVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDC 184
GHVAVFDATNTTRERR++I F +++GYK FF+ESIC DP +IA NI QVKLGSPDY++
Sbjct: 123 GHVAVFDATNTTRERRAMIFNFGEQNGYKTFFVESICVDPEVIAANIVQVKLGSPDYVNR 182
Query: 185 DREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYL 244
D ++ EDF++RIECYE +Y+ LDEE D LSYIKI DVG Y+VNRV DHIQSR VYYL
Sbjct: 183 DSDEATEDFMRRIECYENSYESLDEEQDRDLSYIKIMDVGQSYVVNRVADHIQSRIVYYL 242
Query: 245 MNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTS 304
MNIHVTPRSIYLCR GESELN++GRIGGD GLS RG++++ LA FI Q I LKV+TS
Sbjct: 243 MNIHVTPRSIYLCRAGESELNLKGRIGGDPGLSPRGREFSKHLAQFISDQNIKDLKVFTS 302
Query: 305 HMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPK 364
MKRTIQTAEAL VPYEQ+K LNEIDAGVCEEMTYEEIQ+HYP EFALRDQDKYRYRYPK
Sbjct: 303 QMKRTIQTAEALSVPYEQFKVLNEIDAGVCEEMTYEEIQDHYPLEFALRDQDKYRYRYPK 362
Query: 365 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLK 424
GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDK+++ELPYLKCPLHTVLK
Sbjct: 363 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKAAEELPYLKCPLHTVLK 422
Query: 425 LTPVAYGCKVESIYLNVEAVNTHREKPENVDITREPEEALDTVPAH 470
LTPVAYGCKVESI+LNV AVNTHR++P+NVDI+R EEAL TVPAH
Sbjct: 423 LTPVAYGCKVESIFLNVAAVNTHRDRPQNVDISRPSEEALVTVPAH 468
>1K6M-A nrPDB
Length = 432
Score = 744 bits (1921), Expect = 0.0, Method: Composition-based stats.
Identities = 427/432 (98%), Positives = 431/432 (99%)
Query: 40 NSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNM 99
NSPTMVIMVGLPARGKTYISTKLTRYLN+IGTPTKVFNLGQYRREAVSYKNYEFFLPDNM
Sbjct: 1 NSPTMVIMVGLPARGKTYISTKLTRYLNFIGTPTKVFNLGQYRREAVSYKNYEFFLPDNM 60
Query: 100 EALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIES 159
EALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIES
Sbjct: 61 EALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIES 120
Query: 160 ICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIK 219
ICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIK
Sbjct: 121 ICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIK 180
Query: 220 IFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVR 279
IFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVR
Sbjct: 181 IFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVR 240
Query: 280 GKQYAYALANFIQSQGISSLKVWTSHMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTY 339
GKQYAYALANFIQSQGISSLKV+TS MKRTIQTAEALGVPYEQ+KALNEIDAGVCEEMTY
Sbjct: 241 GKQYAYALANFIQSQGISSLKVFTSRMKRTIQTAEALGVPYEQFKALNEIDAGVCEEMTY 300
Query: 340 EEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRC 399
EEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRC
Sbjct: 301 EEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRC 360
Query: 400 LLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAVNTHREKPENVDITRE 459
LLAYFLDKSS+ELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAVNTHREKPENVDITRE
Sbjct: 361 LLAYFLDKSSEELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAVNTHREKPENVDITRE 420
Query: 460 PEEALDTVPAHY 471
PEEALDTVPAHY
Sbjct: 421 PEEALDTVPAHY 432
>4D4L-A nrPDB
Length = 449
Score = 714 bits (1843), Expect = 0.0, Method: Composition-based stats.
Identities = 321/450 (71%), Positives = 385/450 (85%), Gaps = 6/450 (1%)
Query: 7 ELTQTRLQKIWIPHSSGSSRLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYL 66
ELTQ+R+QKIW+P S L R G P+ TNSPT+++MVGLPARGKTYIS KLTRYL
Sbjct: 4 ELTQSRVQKIWVPVDHRPS-LPRSCG---PKLTNSPTVIVMVGLPARGKTYISKKLTRYL 59
Query: 67 NWIGTPTKVFNLGQYRREAVS-YKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEG 125
NWIG PTKVFN+G+YRREAV Y +Y FF PDN EA+++RKQCALAAL+DV +YL+ E G
Sbjct: 60 NWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGG 119
Query: 126 HVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCD 185
+AVFDATNTTRERR +IL FAKE+ +K FFIES+C+DP ++A NI +VK+ SPDY DC+
Sbjct: 120 QIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCN 179
Query: 186 REKVLEDFLKRIECYEVNYQPLD-EELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYL 244
+ ++DF+KRI CYE +YQPLD ++ D LS IK+ DVG R++VNRVQDHIQSR VYYL
Sbjct: 180 SAEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVNRVQDHIQSRIVYYL 239
Query: 245 MNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTS 304
MNIHV PR+IYLCRHGE+E N++GRIGGDSGLS RGK++A AL+ F++ Q + L+VWTS
Sbjct: 240 MNIHVQPRTIYLCRHGENEHNLQGRIGGDSGLSSRGKKFASALSKFVEEQNLKDLRVWTS 299
Query: 305 HMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPK 364
+K TIQTAEAL +PYEQWKALNEIDAGVCEE+TYEEI++ YPEE+ALR+QDKY YRYP
Sbjct: 300 QLKSTIQTAEALRLPYEQWKALNEIDAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPT 359
Query: 365 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLK 424
GESY+DLVQRLEPVIMELERQENVLVICHQAV+RCLLAYFLDKS++E+PYLKCPLHTVLK
Sbjct: 360 GESYQDLVQRLEPVIMELERQENVLVICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLK 419
Query: 425 LTPVAYGCKVESIYLNVEAVNTHREKPENV 454
LTPVAYGC+VESIYLNVE+V THRE+ E+
Sbjct: 420 LTPVAYGCRVESIYLNVESVCTHRERSEDA 449
>2DWP-A nrPDB
Length = 520
Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats.
Identities = 321/450 (71%), Positives = 385/450 (85%), Gaps = 6/450 (1%)
Query: 7 ELTQTRLQKIWIPHSSGSSRLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYL 66
ELTQ+R+QKIW+P S L R G P+ TNSPT+++MVGLPARGKTYIS KLTRYL
Sbjct: 4 ELTQSRVQKIWVPVDHRPS-LPRSCG---PKLTNSPTVIVMVGLPARGKTYISKKLTRYL 59
Query: 67 NWIGTPTKVFNLGQYRREAVS-YKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEG 125
NWIG PTKVFN+G+YRREAV Y +Y FF PDN EA+++RKQCALAAL+DV +YL+ E G
Sbjct: 60 NWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGG 119
Query: 126 HVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCD 185
+AVFDATNTTRERR +IL FAKE+ +K FFIES+C+DP ++A NI +VK+ SPDY DC+
Sbjct: 120 QIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCN 179
Query: 186 REKVLEDFLKRIECYEVNYQPLD-EELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYL 244
+ ++DF+KRI CYE +YQPLD ++ D LS IK+ DVG R++VNRVQDHIQSR VYYL
Sbjct: 180 SAEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVNRVQDHIQSRIVYYL 239
Query: 245 MNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTS 304
MNIHV PR+IYLCRHGE+E N++GRIGGDSGLS RGK++A AL+ F++ Q + L+VWTS
Sbjct: 240 MNIHVQPRTIYLCRHGENEHNLQGRIGGDSGLSSRGKKFASALSKFVEEQNLKDLRVWTS 299
Query: 305 HMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPK 364
+K TIQTAEAL +PYEQWKALNEIDAGVCEE+TYEEI++ YPEE+ALR+QDKY YRYP
Sbjct: 300 QLKSTIQTAEALRLPYEQWKALNEIDAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPT 359
Query: 365 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLK 424
GESY+DLVQRLEPVIMELERQENVLVICHQAV+RCLLAYFLDKS++E+PYLKCPLHTVLK
Sbjct: 360 GESYQDLVQRLEPVIMELERQENVLVICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLK 419
Query: 425 LTPVAYGCKVESIYLNVEAVNTHREKPENV 454
LTPVAYGC+VESIYLNVE+V THRE+ E+
Sbjct: 420 LTPVAYGCRVESIYLNVESVCTHRERSEDA 449
>5HTK-A nrPDB
Length = 505
Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats.
Identities = 312/430 (72%), Positives = 369/430 (85%), Gaps = 2/430 (0%)
Query: 26 RLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREA 85
R+ ++ S TNSPT+++M+GLPARGKTY+S KLTRYLNWIG PTKVFNLG YRREA
Sbjct: 22 RMSEKKCSWASYMTNSPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRREA 81
Query: 86 V-SYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLIL 144
V SYK+Y+FF DN EA++IRKQCAL AL+DV YL+ E G +AVFDATNTTRERR +IL
Sbjct: 82 VKSYKSYDFFRHDNEEAMKIRKQCALVALEDVKAYLTEENGQIAVFDATNTTRERRDMIL 141
Query: 145 QFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNY 204
FA+++ +KVFF+ES+C+DP +IA NI +VK+ SPDY + +RE V+EDFLKRIECY+V Y
Sbjct: 142 NFAEQNSFKVFFVESVCDDPDVIAANILEVKVSSPDYPERNRENVMEDFLKRIECYKVTY 201
Query: 205 QPLD-EELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESE 263
+PLD + D LS+IK+ +VG R++VNRVQD+IQS+ VYYLMNIHV PR+IYLCRHGESE
Sbjct: 202 RPLDPDNYDKDLSFIKVINVGQRFLVNRVQDYIQSKIVYYLMNIHVQPRTIYLCRHGESE 261
Query: 264 LNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQTAEALGVPYEQW 323
N+ G+IGGDSGLSVRGKQ+A AL F++ Q I+ LKVWTS +KRTIQTAE+LGVPYEQW
Sbjct: 262 FNLLGKIGGDSGLSVRGKQFAQALRKFLEEQEITDLKVWTSQLKRTIQTAESLGVPYEQW 321
Query: 324 KALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELE 383
K LNEIDAGVCEEMTY EI++ YPEEFALRDQ+KY YRYP GESY+DLVQRLEPVIMELE
Sbjct: 322 KILNEIDAGVCEEMTYAEIEKRYPEEFALRDQEKYLYRYPGGESYQDLVQRLEPVIMELE 381
Query: 384 RQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEA 443
RQ NVLVI HQAVMRCLLAYFLDK +DELPYL+CPLHT+ KLTPVAYGCKVE+I LNVEA
Sbjct: 382 RQGNVLVISHQAVMRCLLAYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVETIKLNVEA 441
Query: 444 VNTHREKPEN 453
VNTHR+KP N
Sbjct: 442 VNTHRDKPTN 451
>5HR5-A nrPDB
Length = 531
Score = 679 bits (1752), Expect = 0.0, Method: Composition-based stats.
Identities = 312/430 (72%), Positives = 368/430 (85%), Gaps = 2/430 (0%)
Query: 26 RLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREA 85
R+ ++ S TNSPT+++M+GLPARGKTY+S KLTRYLNWIG PTKVFNLG YRR+A
Sbjct: 23 RISEKKCSWASYMTNSPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRRQA 82
Query: 86 V-SYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLIL 144
V SYK+Y+FF DN EA++IRKQCAL ALKDV YL+ E G +AVFDATNTTRERR LIL
Sbjct: 83 VKSYKSYDFFRHDNEEAMKIRKQCALVALKDVKAYLTEESGQIAVFDATNTTRERRDLIL 142
Query: 145 QFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNY 204
FA+E+ +KVFF+ES+C+DP +IA NI +VK+ SPDY + +RE V++DFLKRIECY+V Y
Sbjct: 143 NFAEENSFKVFFVESVCDDPDVIAANILEVKVSSPDYPERNRENVMDDFLKRIECYKVTY 202
Query: 205 QPLD-EELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESE 263
QPLD + D LS+IK+ +VG R++VN+VQD+IQS+ VYYLMNIHV PR+IYLCRHGESE
Sbjct: 203 QPLDPDSHDKDLSFIKVINVGQRFLVNKVQDYIQSKIVYYLMNIHVHPRTIYLCRHGESE 262
Query: 264 LNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQTAEALGVPYEQW 323
N+ G+IGGDSGLSVRGKQ+A AL F++ Q I+ LKVWTS +KRTIQTAE+LGV YEQW
Sbjct: 263 FNLLGKIGGDSGLSVRGKQFAQALRKFLEEQEIADLKVWTSQLKRTIQTAESLGVTYEQW 322
Query: 324 KALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELE 383
K LNEIDAGVCEEMTY EIQE YP+EFALRD++KY YRYP GESY+DLVQRLEPVIMELE
Sbjct: 323 KILNEIDAGVCEEMTYAEIQEQYPDEFALRDEEKYLYRYPGGESYQDLVQRLEPVIMELE 382
Query: 384 RQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEA 443
RQ NVLVI HQAVMRCLLAYFLDK +DELPYL+CPLHT+ KLTPVAYGCKVE+I LNVEA
Sbjct: 383 RQGNVLVISHQAVMRCLLAYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVETIKLNVEA 442
Query: 444 VNTHREKPEN 453
VNTHR+KP N
Sbjct: 443 VNTHRDKPTN 452
>1C7Z-A nrPDB
Length = 191
Score = 293 bits (750), Expect = 1e-79, Method: Composition-based stats.
Identities = 186/190 (97%), Positives = 189/190 (99%)
Query: 252 RSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311
RSIYLCRHGESELN+RGRIGGDSGLS RGKQYAYALANFI+SQGISSLKVWTSHMKRTIQ
Sbjct: 2 RSIYLCRHGESELNLRGRIGGDSGLSARGKQYAYALANFIRSQGISSLKVWTSHMKRTIQ 61
Query: 312 TAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDL 371
TAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDL
Sbjct: 62 TAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDL 121
Query: 372 VQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYG 431
VQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYG
Sbjct: 122 VQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYG 181
Query: 432 CKVESIYLNV 441
C+VESIYLNV
Sbjct: 182 CRVESIYLNV 191
>4EO9-A nrPDB
Length = 268
Score = 227 bits (579), Expect = 7e-60, Method: Composition-based stats.
Identities = 58/235 (24%), Positives = 91/235 (38%), Gaps = 47/235 (20%)
Query: 253 SIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTI 310
++ L RHGES+ N R G D GL+ +G+ A + + ++TS ++R I
Sbjct: 29 TLILLRHGESDWNARNLFTGWVDVGLTDKGRAEAVRSGELLAEHNLLPDVLYTSLLRRAI 88
Query: 311 -------QTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRY--- 360
TA+ L +P + LNE G + + + Y EE + + Y
Sbjct: 89 TTAHLALDTADWLWIPVRRSWRLNERHYGALQGLDKAVTKARYGEERFMAWRRSYDTPPP 148
Query: 361 --------------RY------PKGESYEDLVQRLEP-----VIMELERQENVLVICHQA 395
RY P E D+V R P ++ +L VL++ H
Sbjct: 149 PIEKGSEFSQDADPRYTDIGGGPLTECLADVVTRFLPYFTDVIVPDLRTGRTVLIVAHGN 208
Query: 396 VMRCLLAYFLDKSSDELPYLKCPLHTVLK------LTPVAYGCKVESIYLNVEAV 444
+R L+ + + S DE+ L P L+ L PV G YL+ EA
Sbjct: 209 SLRALVKHLDEMSDDEVVGLNVPTGIPLRYDLDADLRPVVPG----GTYLDPEAA 259
>1RII-A nrPDB
Length = 265
Score = 220 bits (561), Expect = 9e-58, Method: Composition-based stats.
Identities = 57/233 (24%), Positives = 90/233 (38%), Gaps = 47/233 (20%)
Query: 253 SIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTI 310
S+ L RHGES+ N G D GL+ +G+ A I + ++TS ++R I
Sbjct: 6 SLVLLRHGESDWNALNLFTGWVDVGLTDKGQAEAVRSGELIAEHDLLPDVLYTSLLRRAI 65
Query: 311 QTA-------EALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRY--- 360
TA + L +P + LNE G + + E + Y EE + + Y
Sbjct: 66 TTAHLALDSADRLWIPVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSYDTPPP 125
Query: 361 --------------RY------PKGESYEDLVQRLEP-----VIMELERQENVLVICHQA 395
RY P E D+V R P ++ +L + VL++ H
Sbjct: 126 PIERGSQFSQDADPRYADIGGGPLTECLADVVARFLPYFTDVIVGDLRVGKTVLIVAHGN 185
Query: 396 VMRCLLAYFLDKSSDELPYLKCPLHTVLK------LTPVAYGCKVESIYLNVE 442
+R L+ + S DE+ L P L+ + P+ G YL+ E
Sbjct: 186 SLRALVKHLDQMSDDEIVGLNIPTGIPLRYDLDSAMRPLVRG----GTYLDPE 234
>1FZT-A nrPDB
Length = 211
Score = 217 bits (553), Expect = 7e-57, Method: Composition-based stats.
Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 19/216 (8%)
Query: 245 MNIHVTPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVW 302
M P + L RHGESE N G D LS G + A ++S+G +
Sbjct: 1 MTTEAAPNLLVLTRHGESEWNKLNLFTGWKDPALSETGIKEAKLGGERLKSRGYKFDIAF 60
Query: 303 TSHMKRTIQTAEAL-------GVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQ 355
TS ++R +T + + + + + LNE G + + ++ ++ + E +
Sbjct: 61 TSALQRAQKTCQIILEEVGEPNLETIKSEKLNERYYGDLQGLNKDDARKKWGAEQVQIWR 120
Query: 356 DKYRYRYPKGESYEDLVQRLEP-----VIMELERQENVLVICHQAVMRCLLAYFLDKSSD 410
Y P GES +D +R+ P ++ + + E VL+ H +R L+ + D
Sbjct: 121 RSYDIAPPNGESLKDTAERVLPYYKSTIVPHILKGEKVLIAAHGNSLRALIMDLEGLTGD 180
Query: 411 ELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAVNT 446
++ +K L T + P+ Y + Y++ E ++
Sbjct: 181 QI--VKRELATGV---PIVYHLDKDGKYVSKELIDN 211
>4ODI-A nrPDB
Length = 281
Score = 216 bits (549), Expect = 3e-56, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 93/260 (35%), Gaps = 48/260 (18%)
Query: 243 YLMNIHVTPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLK 300
+ N+ ++ L RHGES N R G D LS G+Q A A ++ +G
Sbjct: 10 FFGNMAKAKYTLVLIRHGESTWNKENRFTGWTDVPLSPVGEQEAVEAAKALKEKGFEFDV 69
Query: 301 VWTSHMKRTIQTA-------EALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALR 353
+TS ++R + T + +P + LNE G + + E + +E
Sbjct: 70 AYTSVLQRAVVTCWTVLKGTDMCHIPVKSSWRLNERHYGALQGLNKAETAAKHGDEQVKI 129
Query: 354 DQDKY----------RYRYPK---------------GESYEDLVQRLEP-----VIMELE 383
+ Y R+P E +D V+R+ P + +
Sbjct: 130 WRRSYDIPPPPLEKSDKRWPGNDAVYKMVPNEALPLTECLKDTVERVLPFWFDHIAPSIM 189
Query: 384 RQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVL------KLTPV--AYGCKVE 435
+ VLV H +R L+ + S + + L P L L PV Y
Sbjct: 190 EGKRVLVAAHGNSLRGLVKHLDKMSDEAVLELNIPTGVPLVYELDEDLQPVRHYYLLDEA 249
Query: 436 SIYLNVEAVNTH-REKPENV 454
+ +EAV + K EN+
Sbjct: 250 ELKAKMEAVANQGKAKGENL 269
>3KKK-A nrPDB
Length = 258
Score = 212 bits (540), Expect = 2e-55, Method: Composition-based stats.
Identities = 56/240 (23%), Positives = 96/240 (40%), Gaps = 45/240 (18%)
Query: 249 VTPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHM 306
+T ++ L RHGES N + G D LS +G++ A A +++ + V+TS +
Sbjct: 9 MTTYTLVLLRHGESTWNKENKFTGWTDVPLSEKGEEEAIAAGKYLKEKNFKFDVVYTSVL 68
Query: 307 KRTI-------QTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQ---- 355
KR I +TA+ L VP + LNE G + + E + Y EE +
Sbjct: 69 KRAICTAWNVLKTADLLHVPVVKTWRLNERHCGSLQGLNKSETAKKYGEEQVKIWRRSYD 128
Query: 356 ------DKYRYRYPK---------------GESYEDLVQRLEP-----VIMELERQENVL 389
DK R+P E +D V+R+ P + ++ + V+
Sbjct: 129 IPPPKLDKEDNRWPGHNVVYKNVPKDALPFTECLKDTVERVLPFWFDHIAPDILANKKVM 188
Query: 390 VICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVL------KLTPVAYGCKVESIYLNVEA 443
V H +R L+ + + S ++ L P L L P+ + ++S L +
Sbjct: 189 VAAHGNSLRGLVKHLDNLSEADVLELNIPTGVPLVYELDENLKPIKHYYLLDSEELKKKM 248
>5PGM-D nrPDB
Length = 246
Score = 206 bits (524), Expect = 2e-53, Method: Composition-based stats.
Identities = 54/234 (23%), Positives = 91/234 (38%), Gaps = 50/234 (21%)
Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311
+ L RHG+SE N + G D LS +G+Q A ++ + + ++TS + R IQ
Sbjct: 3 LVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKKVYPDVLYTSKLSRAIQ 62
Query: 312 TA-------EALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEE--------------- 349
TA + L +P + LNE G + E + + EE
Sbjct: 63 TANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKFGEEKFNTYRRSFDVPPPP 122
Query: 350 ------FALRDQDKYRY----RYPKGESYEDLVQRLEP-----VIMELERQENVLVICHQ 394
F+ + ++Y+Y P+ ES ++ RL P + +L + V++ H
Sbjct: 123 IDASSPFSQKGDERYKYVDPNVLPETESLALVIDRLLPYWQDVIAKDLLSGKTVMIAAHG 182
Query: 395 AVMRCLLAYFLDKSSDELPYLKCPLHTVL------KLTPVAYGCKVESIYLNVE 442
+R L+ + S ++ L P L L P S YL+ E
Sbjct: 183 NSLRGLVKHLEGISDADIAKLNIPTGIPLVFELDENLKP-----SKPSYYLDPE 231
>1E58-A nrPDB
Length = 249
Score = 206 bits (523), Expect = 3e-53, Method: Composition-based stats.
Identities = 52/209 (24%), Positives = 81/209 (38%), Gaps = 39/209 (18%)
Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311
+ L RHGES+ N R G D LS +G A A ++ +G S +TS +KR I
Sbjct: 5 LVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGYSFDFAYTSVLKRAIH 64
Query: 312 TA-------EALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQ--------- 355
T + +P E+ LNE G + + E E Y +E + +
Sbjct: 65 TLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPE 124
Query: 356 ---DKYRY-------------RYPKGESYEDLVQRLEP-----VIMELERQENVLVICHQ 394
D RY P ES + R+ P ++ ++ E V++ H
Sbjct: 125 LTKDDERYPGHDPRYAKLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVIIAAHG 184
Query: 395 AVMRCLLAYFLDKSSDELPYLKCPLHTVL 423
+R L+ Y + S +E+ L P L
Sbjct: 185 NSLRALVKYLDNMSEEEILELNIPTGVPL 213
>5VVE-A nrPDB
Length = 258
Score = 202 bits (514), Expect = 3e-52, Method: Composition-based stats.
Identities = 50/211 (23%), Positives = 79/211 (37%), Gaps = 39/211 (18%)
Query: 252 RSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRT 309
+ L RHGESE N + G D GLS G + A + +G +TS +KR
Sbjct: 11 YKLVLIRHGESEWNKENKFTGWYDCGLSETGLKEAKEAGEILLKEGYEFDLCYTSFLKRA 70
Query: 310 I-------QTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRY-- 360
I +T +A+ +P + LNE G + + + E + EE + Y
Sbjct: 71 IKTLWIALETMDAMYLPVVKHWRLNERHYGALQGLNKTQTAEKHGEEQVKIWRRSYDIPP 130
Query: 361 -----------------------RYPKGESYEDLVQRLEP-----VIMELERQENVLVIC 392
PK ES + V R+ P + ++ + VL+
Sbjct: 131 PALEVTDERYPGHERKYQGLTQEELPKTESLKLTVDRVLPYWNDVIAPSVKEGKRVLIAA 190
Query: 393 HQAVMRCLLAYFLDKSSDELPYLKCPLHTVL 423
H +R L+ Y + S +E+ L P L
Sbjct: 191 HGNSLRALVKYLDNISEEEIVELNIPTGVPL 221
>3PGM-A nrPDB
Length = 244
Score = 200 bits (509), Expect = 1e-51, Method: Composition-based stats.
Identities = 54/232 (23%), Positives = 93/232 (40%), Gaps = 48/232 (20%)
Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311
+ L RHG+SE N + G D LS +G+Q A ++ +G++ L +TS + R IQ
Sbjct: 3 LVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKGVNVLVDYTSKLSRAIQ 62
Query: 312 TA-------EALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEE--------------- 349
TA + L +P + LNE G + + + + EE
Sbjct: 63 TANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAQTLKKFGEEKFNTYRRSFDVPPPP 122
Query: 350 ------FALRDQDKYRY----RYPKGESYEDLVQRLEPVIMEL---ERQENVLVICHQAV 396
F+ + ++Y+Y P+ ES ++ RL P ++ + ++ H
Sbjct: 123 IDASSPFSQKGDERYKYVDPNVLPETESLALVIDRLLPYWQDVIAKLVGKTSMIAAHGNS 182
Query: 397 MRCLLAYFLDKSSDELPYLKCPLHTVL------KLTPVAYGCKVESIYLNVE 442
+R L+ + S ++ L P T+L L P S YL+ E
Sbjct: 183 LRGLVKHLEGISDADIAKLNIPPGTILVFELDENLKP-----SKPSYYLDPE 229
>3GW8-A nrPDB
Length = 257
Score = 197 bits (500), Expect = 1e-50, Method: Composition-based stats.
Identities = 50/222 (22%), Positives = 78/222 (35%), Gaps = 45/222 (20%)
Query: 252 RSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRT 309
+ L RHGES N R G D L+ +G + A ++ G + +TS +KR
Sbjct: 10 YKLVLIRHGESTWNKENRFTGWVDVDLTEQGNREARQAGQLLKEAGYTFDIAYTSVLKRA 69
Query: 310 IQT-------AEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRY-- 360
I+T + + VP LNE G + E Y +E L + Y
Sbjct: 70 IRTLWHVQDQMDLMYVPVVHSWRLNERHYGALSGLNKAETAAKYGDEQVLVWRRSYDTPP 129
Query: 361 -----------------------RYPKGESYEDLVQRLEP-----VIMELERQENVLVIC 392
+ P E +D V R+ P + ++ + VL+
Sbjct: 130 PALEPGDERAPYADPRYAKVPREQLPLTECLKDTVARVLPLWNESIAPAVKAGKQVLIAA 189
Query: 393 HQAVMRCLLAYFLDKSSDELPYLKCPLHTVL------KLTPV 428
H +R L+ Y S ++ L P L LTP+
Sbjct: 190 HGNSLRALIKYLDGISDADIVGLNIPNGVPLVYELDESLTPI 231
>4EMB-A nrPDB
Length = 274
Score = 188 bits (477), Expect = 5e-48, Method: Composition-based stats.
Identities = 47/223 (21%), Positives = 77/223 (34%), Gaps = 44/223 (19%)
Query: 252 RSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRT 309
+ L RHGESE N G D LS +G A ++ +G S ++S + R
Sbjct: 28 YKLVLVRHGESEWNKENLFTGWTDVKLSDKGIDEAVEAGLLLKQEGYSFDIAFSSLLSRA 87
Query: 310 IQTAEAL-------GVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRY-- 360
T + + ++ LNE G + + E Y E+ L + Y
Sbjct: 88 NDTLNIILRELGQSYISVKKTWRLNERHYGALQGLNKSETAAKYGEDKVLIWRRSYDVPP 147
Query: 361 -----------------------RYPKGESYEDLVQRLEP-----VIMELERQENVLVIC 392
P E +D V R+ P + E+ + V+V
Sbjct: 148 MSLDESDDRHPIKDPRYKHIPKRELPSTECLKDTVARVIPYWTDEIAKEVLEGKKVIVAA 207
Query: 393 HQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVE 435
H +R L+ YF + S +++ L P P+ Y +
Sbjct: 208 HGNSLRALVKYFDNLSEEDVLKLNIPTGI-----PLVYELDKD 245
>5Y64-B nrPDB
Length = 262
Score = 185 bits (470), Expect = 3e-47, Method: Composition-based stats.
Identities = 44/234 (18%), Positives = 78/234 (33%), Gaps = 46/234 (19%)
Query: 249 VTPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHM 306
+ + L RHGES N+ R G D+ LS G + A ++ G +TS
Sbjct: 1 MAAYKLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQ 60
Query: 307 KRTIQTA-------EALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYR 359
KR I+T + + +P + LNE G + E + E + Y
Sbjct: 61 KRAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRSYD 120
Query: 360 Y---------------------------RYPKGESYEDLVQRLEP-----VIMELERQEN 387
+ P ES +D + R P ++ +++ +
Sbjct: 121 VPPPPMEPDHPFYSNISKDRRYADLTEDQLPSCESLKDTIARALPFWNEEIVPQIKEGKR 180
Query: 388 VLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNV 441
VL+ H +R ++ + S + + L P P+ Y +
Sbjct: 181 VLIAAHGNSLRGIVKHLEGLSEEAIMELNLPTGI-----PIVYELDKNLKPIKP 229
>3D8H-A nrPDB
Length = 267
Score = 182 bits (462), Expect = 3e-46, Method: Composition-based stats.
Identities = 48/215 (22%), Positives = 77/215 (35%), Gaps = 39/215 (18%)
Query: 250 TPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMK 307
+ + L RHGESE N R G D LS +G A + +G V+TS +K
Sbjct: 19 STYKLTLIRHGESEWNKENRFTGWTDVSLSEQGVSEAIEAGRMLLEKGFKFDVVYTSVLK 78
Query: 308 RTIQTA-------EALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQ----- 355
R I T + P LNE G + + E + E+ +
Sbjct: 79 RAIMTTWTVLKELGNINCPIINHWRLNERHYGALQGLNKSETASKFGEDQVKIWRRSFDV 138
Query: 356 -----DKYRYRYPK---------------GESYEDLVQRLEP-----VIMELERQENVLV 390
+K R+P E +D V+R++P + + ++VLV
Sbjct: 139 PPPVLEKSDPRWPGNELIYKGICPSCLPTTECLKDTVERVKPYFEDVIAPSIMSGKSVLV 198
Query: 391 ICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKL 425
H +R LL + +++ + P L L
Sbjct: 199 SAHGNSLRALLYLLEGMTPEQILEVNIPTACPLVL 233
>4IJ6-A nrPDB
Length = 211
Score = 181 bits (460), Expect = 4e-46, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 11/173 (6%)
Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKR--- 308
+ L R ESE N GR G D LS RGK+ A LA + + + +++S +KR
Sbjct: 4 LILVRAAESEWNPVGRYQGLLDPDLSERGKKQAKLLAQELSREHL--DVIYSSPLKRTYL 61
Query: 309 -TIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGES 367
++ AEA + + + EID G+ M EE+ E YPE+F ++ ++ + GES
Sbjct: 62 TALEIAEAKNLEVIKEDRIIEIDHGMWSGMLVEEVMEKYPEDFRRWVEEPHKVEFQGGES 121
Query: 368 YEDLVQRLEPVIMELERQ---ENVLVICHQAVMRCLLAYFLDKSSDELPYLKC 417
+ R++ + E+ ++ + V+V+ H MR + L + C
Sbjct: 122 LASVYNRVKGFLEEVRKRHWNQTVVVVSHTVPMRAMYCALLGVDLSKFWSFGC 174
>5UM0-A nrPDB
Length = 235
Score = 180 bits (456), Expect = 2e-45, Method: Composition-based stats.
Identities = 45/209 (21%), Positives = 76/209 (36%), Gaps = 39/209 (18%)
Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311
+ RHG+SE N + G D LS +G A A ++ G +TS + R I+
Sbjct: 11 LVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKENGYEFDIAFTSVLTRAIK 70
Query: 312 TA-------EALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRY---- 360
T + L VP + LNE G + + ++ E Y +E + Y
Sbjct: 71 TCNIVLEESDQLFVPQIKTWRLNERHYGRLQGLDKKQTAEKYGDEQVRIWRRSYDTLPPL 130
Query: 361 ---------------------RYPKGESYEDLVQRLEP-----VIMELERQENVLVICHQ 394
P GE+ + ++R+ P + + + VLV H
Sbjct: 131 LDKDDAFSAHKDRRYAHLPADVVPDGENLKVTLERVLPFWEDQIAPAILSGKRVLVAAHG 190
Query: 395 AVMRCLLAYFLDKSSDELPYLKCPLHTVL 423
+R L + S +++ L+ P L
Sbjct: 191 NSLRALAKHIEGISDEDIMGLEIPTGQPL 219
>6NRU-A nrPDB
Length = 206
Score = 178 bits (451), Expect = 5e-45, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 82/177 (46%), Gaps = 13/177 (7%)
Query: 254 IYLCRHGESELNIRGRIGGDSG--LSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311
++L RHGE++ N+ G G + L+ RG + A L + +S V S ++R
Sbjct: 6 LWLIRHGETQANVDGLYSGHAPTPLTARGIEQAQNLHTLLDD--VSFDLVLCSELERAQH 63
Query: 312 TAEAL----GVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYP-KGE 366
TA + +P LNE+ G E + ++ + E ++ D +++ P GE
Sbjct: 64 TARLVLSDRQLPVHIIPELNEMFFGDWEMRHHRDLMQEDAENYSAWCND-WQHAIPTNGE 122
Query: 367 SYEDLVQRLEPVIMEL---ERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLH 420
++ QR+E I L + +N+L++ HQ V+ L+A + ++ + + +
Sbjct: 123 GFQAFSQRVERFIARLSEYQHYQNILIVSHQGVLSLLIARLIGMPAESMWHFRVDQG 179
>3NFY-A nrPDB
Length = 267
Score = 160 bits (405), Expect = 1e-39, Method: Composition-based stats.
Identities = 45/220 (20%), Positives = 81/220 (36%), Gaps = 43/220 (19%)
Query: 249 VTPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHM 306
++ + + RHGE N R D L+ G + A +++ V+TS +
Sbjct: 1 MSKYKLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVL 60
Query: 307 KRTIQTAEAL-------GVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYR 359
R+I TA + VP E LNE G + E++ ++ EE + Y
Sbjct: 61 NRSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYN 120
Query: 360 Y-----------------------------RYPKGESYEDLVQRLEP-----VIMELERQ 385
+ P+ ES +D+++RL P + E+ R
Sbjct: 121 VTPPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRG 180
Query: 386 ENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKL 425
+ +L+ H R LL + S +++ + P + L
Sbjct: 181 KTILISAHGNSSRALLKHLEGISDEDIINITLPTGVPILL 220
>4PZA-A nrPDB
Length = 223
Score = 91.3 bits (225), Expect = 8e-19, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 20/164 (12%)
Query: 249 VTPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHM 306
+ R + + RHG+++ N+ R+ G D+ LS G+ A A A + + L + +S +
Sbjct: 1 MRARRLVMLRHGQTDYNVGSRMQGQLDTELSELGRTQAVAAAEVLGKR--QPLLIVSSDL 58
Query: 307 KRTIQTA----EALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRY 362
+R TA E G+ L E G + +T+ +I P L ++ +
Sbjct: 59 RRAYDTAVKLGERTGLVVRVDTRLRETHLGDWQGLTHAQIDADAPGA-RLAWREDATWAP 117
Query: 363 PKGESYEDLVQRLEPVIMELERQE-----------NVLVICHQA 395
GES D+ R P++ EL E V+++ H
Sbjct: 118 HGGESRVDVAARSRPLVAELVASEPEWGGADEPDRPVVLVAHGG 161
>3E9D-A nrPDB
Length = 265
Score = 83.9 bits (206), Expect = 1e-16, Method: Composition-based stats.
Identities = 52/247 (21%), Positives = 89/247 (36%), Gaps = 59/247 (23%)
Query: 249 VTPRSIYLCRHGESELNIRGRIGG---DSGLSVRGKQYAYALANFIQSQGISSLKVWTSH 305
+ ++ + RHGE++ N + G D+ LS G Q A A +++ + V+ S+
Sbjct: 1 MLTFALTIVRHGETQYNRDKLLQGQGIDTPLSDTGHQQAAAAGRYLKD--LHFTNVFVSN 58
Query: 306 MKRTIQTAEAL--------GVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDK 357
++R IQTAE + L E GV E E ++ Q
Sbjct: 59 LQRAIQTAEIILGNNLHSSATEMILDPLLRERGFGVAEGRPKEHLKNM----ANAAGQSC 114
Query: 358 YRYRYPKGESYEDLVQRLEPVIMELERQ-----------------------------ENV 388
Y P GE+ E + R + + L ++ +NV
Sbjct: 115 RDYTPPGGETLEQVKTRFKMFLKSLFQRMFEEHGSALSSVPSEADQPVIAGLADDGAQNV 174
Query: 389 ----LVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAV 444
L++ H A +R + + ++ L+C L LK+ V C I +
Sbjct: 175 PVHALMVSHGAFIRISVRHLVE-------DLQCCLPAGLKMNQVFSPCPNTGI--SRFIF 225
Query: 445 NTHREKP 451
HRE+
Sbjct: 226 TIHREES 232
>3HJG-A nrPDB
Length = 213
Score = 77.8 bits (190), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 71/168 (42%), Gaps = 10/168 (5%)
Query: 247 IHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTSHM 306
+ + +IYL RHG+ + + G + L V+ + +A +++G + +S +
Sbjct: 1 MSLKTLNIYLMRHGKVDAAPG--LHGQTDLKVK-EAEQQQIAMAWKTKGYDVAGIISSPL 57
Query: 307 KR----TIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRY 362
R AE +P L E+D G + M + ++ + ++ Q +
Sbjct: 58 SRCHDLAQILAEQQLLPMTTEDDLQEMDFGDFDGMPF-DLLTEHWKKLDAFWQSPAHHSL 116
Query: 363 PKGESYEDLVQRLEPVIMELER--QENVLVICHQAVMRCLLAYFLDKS 408
P ES QR+ ++ +N+L++ H V+R +LA+ L
Sbjct: 117 PNAESLSTFSQRVSRAWSQIINDINDNLLIVTHGGVIRIILAHVLGVD 164
>3LG2-A nrPDB
Length = 292
Score = 73.1 bits (178), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 69/188 (36%), Gaps = 32/188 (17%)
Query: 241 VYYLMNIHVTPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALAN--FIQSQGI 296
+Y+ +TPR I RHG++E + G+ G D L+ G+ F +Q +
Sbjct: 17 LYFQGMPSLTPRCII-VRHGQTEWSKSGQYTGLTDLPLTPYGEGQMLRTGESVFRNNQFL 75
Query: 297 SSL---KVWTSHMKRTIQTAEALGVPYEQWKA----------LNEIDAGVCEEMTYEEIQ 343
+ ++TS R QT + + P + L E + G E M EI
Sbjct: 76 NPDNITYIFTSPRLRARQTVDLVLKPLSDEQRAKIRVVVDDDLREWEYGDYEGMLTREII 135
Query: 344 E---HYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELE----------RQENVLV 390
E + +R GE+ + + RL I ++ R +++V
Sbjct: 136 ELRKSRGLDKERPWN-IWRDGCENGETTQQIGLRLSRAIARIQNLHRKHQSEGRASDIMV 194
Query: 391 ICHQAVMR 398
H +R
Sbjct: 195 FAHGHALR 202
>3R7A-A nrPDB
Length = 237
Score = 64.3 bits (155), Expect = 1e-10, Method: Composition-based stats.
Identities = 52/221 (23%), Positives = 86/221 (38%), Gaps = 42/221 (19%)
Query: 253 SIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTI 310
++Y+ RHG++ LN R G DS L +G + A L ++ I + ++S R I
Sbjct: 15 TLYVTRHGKTILNTNHRAQGWADSPLVEKGVEVATNLGTGLKD--IHFMNAYSSDSGRAI 72
Query: 311 QTAEAL-------GVPYEQWKALNEIDAGVCEEMTYEEIQE--------HYPEEFA---- 351
+TA + + EQ K L E++ G+ E + + + PEE
Sbjct: 73 ETANLVLKYSEQSKLKLEQRKKLRELNFGIFEGEKLDNMWDAVGKAAGVTSPEELLKFSI 132
Query: 352 LRDQDKYRYRYPK--GESYEDLVQRLEPVIMELER------QENVLVICHQAVMRCLLAY 403
D R P E +E R++ I ++ NVLV+ H L+
Sbjct: 133 QEVIDLIRAADPTKQAEDWELFSTRIKAEIDKISEEAAKDGGGNVLVVVHG----LLITT 188
Query: 404 FLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAV 444
++ L +V K + Y + IY VE+V
Sbjct: 189 LIEMLDSSKTKLGVENASVTK---IVY---QDGIY-TVESV 222
>3DCY-A nrPDB
Length = 275
Score = 63.9 bits (154), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 50/136 (36%), Gaps = 17/136 (12%)
Query: 250 TPRSIYLCRHGESELNIRGRIGG---DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHM 306
++ + RHGE+ N I G D LS G + A A F+ + ++S +
Sbjct: 7 ARFALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLN--NVKFTHAFSSDL 64
Query: 307 KRTIQTAEAL--------GVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKY 358
RT QT + + + L E GV E E++ ++
Sbjct: 65 MRTKQTMHGILERSKFCKDMTVKYDSRLRERKYGVVEGKALSELRAM----AKAAREECP 120
Query: 359 RYRYPKGESYEDLVQR 374
+ P GE+ + + R
Sbjct: 121 VFTPPGGETLDQVKMR 136
>2YN2-A nrPDB
Length = 279
Score = 58.9 bits (141), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/188 (23%), Positives = 75/188 (39%), Gaps = 23/188 (12%)
Query: 249 VTPRSIYLCRHG-ESEL----NIRGRIGG---DSGLSVRGKQYAYALANFIQSQGISSLK 300
+ +IY+ RHG S G D LS G + A+ LAN+I +
Sbjct: 10 MAIENIYIARHGYRSNWLPKGPYPPPPTGIDNDVPLSEHGVEQAHELANYISKLDVKPEM 69
Query: 301 VWTSHMKRTIQTA----EALGVPYEQWKALNE---IDAGVCEEMTYEEIQEHYPEEFALR 353
+++S R ++T+ EAL +P + + E D + E E+ +
Sbjct: 70 IFSSPFYRCLETSKPTVEALKIPLYVDRGVGEWYKPDRPIIPEPATHEVMSKFFPSMISP 129
Query: 354 DQDKYRYRYPKGESYEDLVQRLEP----VIMELERQ----ENVLVICHQAVMRCLLAYFL 405
D + KGE+ ED+ +R I +ER+ + ++++ H A L L
Sbjct: 130 DWEPSIIPSNKGETEEDIFERCHKFWPVFIDRVERKFPNVKTIMIVTHAATKSALGMNLL 189
Query: 406 DKSSDELP 413
SS + P
Sbjct: 190 KFSSAKEP 197
>3F2I-A nrPDB
Length = 172
Score = 48.9 bits (115), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 254 IYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQTA 313
+YL RHG +E G + L+ GKQ +A + G + TS + R QTA
Sbjct: 3 LYLIRHGIAEAQKTGIKDEERELTQEGKQKTEKVAYRLVKLGRQFDLIVTSPLIRARQTA 62
Query: 314 EAL 316
E L
Sbjct: 63 EIL 65
>6BBQ-A nrPDB
Length = 520
Score = 43.9 bits (102), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 69/171 (40%), Gaps = 19/171 (11%)
Query: 21 SSGSSRLQRRRGSSIPQ-FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLG 79
++ R+ ++G + + F N ++M+GL A GKT I KL + PT FN+
Sbjct: 337 ATRKRRIANKKGKVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNV- 395
Query: 80 QYRREAVSYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDAT-----N 134
E V+YKN +F + D +IR +Y + +G + V D +
Sbjct: 396 ----ETVTYKNVKFNVWDVGGLDKIRPLW--------RHYYTGTQGLIFVVDCADRDRID 443
Query: 135 TTRERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCD 185
R+ I+ + + + + P + + Q KLG D +
Sbjct: 444 EARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRN 494
>3LVQ-E nrPDB
Length = 497
Score = 42.3 bits (98), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 65/169 (38%), Gaps = 20/169 (11%)
Query: 24 SSRLQRRRGSS--IPQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQY 81
S L +S I +N ++M+GL A GKT I KL + PT FN+
Sbjct: 302 PSALNSTASNSPGIEGLSNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNV--- 358
Query: 82 RREAVSYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDAT-----NTT 136
E V+YKN +F + D +IR +Y + +G + V D +
Sbjct: 359 --ETVTYKNVKFNVWDVGGQDKIRPLW--------RHYYTGTQGLIFVVDCADRDRIDEA 408
Query: 137 RERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCD 185
R+ I+ + + + + P + + Q KLG D +
Sbjct: 409 RQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRN 457
>2A5F-A nrPDB
Length = 175
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 18/153 (11%)
Query: 38 FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97
F N ++M+GL A GKT I KL + PT FN+ E V+YKN +F + D
Sbjct: 9 FGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNV-----ETVTYKNVKFNVWD 63
Query: 98 NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDAT-----NTTRERRSLILQFAKEHGY 152
+IR +Y + +G + V D + R+ I+ +
Sbjct: 64 VGGQDKIRPLW--------RHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDA 115
Query: 153 KVFFIESICNDPGIIAENIRQVKLGSPDYIDCD 185
+ + + P + + Q KLG D +
Sbjct: 116 IILIFANKQDLPDAMKPHEIQEKLGLTRIRDRN 148
>4YLG-A nrPDB
Length = 173
Score = 36.2 bits (82), Expect = 0.028, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 32 GSSIPQFTNSPTM-VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKN 90
GS + + M ++MVGL A GKT I KL PT FN+ E V YKN
Sbjct: 2 GSWLSKLLGKKEMRILMVGLDAAGKTSILYKLKLGEIVTTIPTIGFNV-----ETVEYKN 56
Query: 91 YEFFLPDNMEALQIR 105
F + D +IR
Sbjct: 57 ISFTVWDVGGQDKIR 71
>3DM5-A nrPDB
Length = 443
Score = 35.4 bits (80), Expect = 0.056, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 16/110 (14%)
Query: 42 PTMVIMVGLPARGKTYISTKLTRYLNWIG-----TPTKVFNLGQY---RREAVSYKNYEF 93
PT+++MVG+ GKT KL RY G + + G Y R+ Y F
Sbjct: 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYHIEVF 159
Query: 94 FLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLI 143
P +A+++ K+ +Y + + + D +E ++LI
Sbjct: 160 GNPQEKDAIKLAKEGV--------DYFKSKGVDIIIVDTAGRHKEDKALI 201
>6FAE-B nrPDB
Length = 213
Score = 35.0 bits (79), Expect = 0.065, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 15/111 (13%)
Query: 45 VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQI 104
++MVGL A GKT I KL PT FN+ E V YKN F + D +I
Sbjct: 52 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWDVGGQDKI 106
Query: 105 RKQCALAALKDVHNYLSHEEGHVAVFDATNTTR--ERRSLILQFAKEHGYK 153
R +Y + +G + V D+ + R E R +++ E +
Sbjct: 107 RPLW--------RHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELR 149
>5UF8-A nrPDB
Length = 181
Score = 35.0 bits (79), Expect = 0.065, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 15/118 (12%)
Query: 38 FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97
F N ++MVGL A GKT I KL PT FN+ E V YKN F + D
Sbjct: 13 FGNKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWD 67
Query: 98 NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTR--ERRSLILQFAKEHGYK 153
+IR Y + +G + V D+ + R E R + Q E +
Sbjct: 68 VGGQDKIRPLW--------RYYFQNTQGIIFVVDSNDRDRIAEAREELQQMLNEDELR 117
>3O47-A nrPDB
Length = 329
Score = 35.0 bits (79), Expect = 0.067, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 15/111 (13%)
Query: 45 VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQI 104
++MVGL A GKT I KL PT FN+ E V YKN F + D +I
Sbjct: 168 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWDVGGQDKI 222
Query: 105 RKQCALAALKDVHNYLSHEEGHVAVFDATNTTR--ERRSLILQFAKEHGYK 153
R +Y + +G + V D+ + R E R +++ E +
Sbjct: 223 RPLW--------RHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELR 265
>6DFF-C nrPDB
Length = 193
Score = 34.6 bits (78), Expect = 0.082, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 15/111 (13%)
Query: 45 VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQI 104
++MVGL A GKT I KL PT FN+ E V YKN F + D +I
Sbjct: 32 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWDVGGLDKI 86
Query: 105 RKQCALAALKDVHNYLSHEEGHVAVFDATNTTR--ERRSLILQFAKEHGYK 153
R +Y + +G + V D+ + R E R +++ E +
Sbjct: 87 RPLW--------RHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELR 129
>1J2J-A nrPDB
Length = 166
Score = 34.6 bits (78), Expect = 0.082, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 15/111 (13%)
Query: 45 VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQI 104
++MVGL A GKT I KL PT FN+ E V YKN F + D +I
Sbjct: 5 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWDVGGLDKI 59
Query: 105 RKQCALAALKDVHNYLSHEEGHVAVFDATNTTR--ERRSLILQFAKEHGYK 153
R +Y + +G + V D+ + R E R +++ E +
Sbjct: 60 RPLW--------RHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELR 102
>5NZV-F nrPDB
Length = 181
Score = 34.6 bits (78), Expect = 0.084, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 15/118 (12%)
Query: 38 FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97
F N ++MVGL GKT + KL PT FN+ E V YKN F + D
Sbjct: 13 FGNKEMRILMVGLDGAGKTTVLYKLKLGEVITTIPTIGFNV-----ETVQYKNISFTVWD 67
Query: 98 NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTR--ERRSLILQFAKEHGYK 153
+IR +Y + EG + V D+ + +R E R ++ + E +
Sbjct: 68 VGGQDRIRSLW--------RHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELR 117
>3AQ4-A nrPDB
Length = 184
Score = 34.6 bits (78), Expect = 0.10, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 15/111 (13%)
Query: 45 VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQI 104
++MVGL A GKT I KL PT FN+ E V YKN F + D +I
Sbjct: 23 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWDVGGQDKI 77
Query: 105 RKQCALAALKDVHNYLSHEEGHVAVFDATNTTR--ERRSLILQFAKEHGYK 153
R +Y + +G + V D+ + R E R + + E +
Sbjct: 78 RPLW--------RHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELR 120
>2B6H-A nrPDB
Length = 192
Score = 33.5 bits (75), Expect = 0.22, Method: Composition-based stats.
Identities = 35/110 (31%), Positives = 47/110 (42%), Gaps = 16/110 (14%)
Query: 31 RGSSIPQFTNSPTM-VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYK 89
RGS + M ++MVGL A GKT I KL PT FN+ E V YK
Sbjct: 17 RGSLFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYK 71
Query: 90 NYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRER 139
N F + D +IR +Y + +G + V D+ + RER
Sbjct: 72 NICFTVWDVGGQDKIRPLW--------RHYFQNTQGLIFVVDSND--RER 111
>6E3B-A nrPDB
Length = 169
Score = 33.1 bits (74), Expect = 0.30, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 347 PEEFALRDQDKYRYRYPKGESYEDLVQRL-----EPVIMELERQENVLVICHQAVMRCLL 401
PE F+ + YR +P+ E++ L +RL +I E QEN+ + + +
Sbjct: 7 PENFSHVVGEIYRSSFPRQENFSFLHERLKLKSILVLIPEEYPQENLNFLK----LTGIK 62
Query: 402 AYFLDKSSDELPYLKCPLHTVLKLTPVA 429
Y + S ++ P++ P H + K +
Sbjct: 63 LYQVGMSGNKEPFVNIPSHLLTKALEIV 90
>1Z6X-A nrPDB
Length = 180
Score = 32.7 bits (73), Expect = 0.38, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 15/95 (15%)
Query: 45 VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQI 104
++MVGL A GKT I KL PT FN+ E V YKN F + D +I
Sbjct: 20 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNICFTVWDVGGQDRI 74
Query: 105 RKQCALAALKDVHNYLSHEEGHVAVFDATNTTRER 139
R +Y + +G + V D+ + RER
Sbjct: 75 RPLW--------KHYFQNTQGLIFVVDSND--RER 99
>3LRP-A nrPDB
Length = 181
Score = 31.9 bits (71), Expect = 0.67, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 45 VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQI 104
++MVGL A GKT I K+ PT FN+ E V ++N F + D +I
Sbjct: 20 ILMVGLDAAGKTTILYKVKLGEVVTTIPTIGFNV-----ETVEFRNISFTVWDVGGQDKI 74
Query: 105 RKQCALAALKDVHNYLSHEEGHVAVFDATNTTRER 139
R +Y S+ +G + V D+ + RER
Sbjct: 75 RPLW--------RHYYSNTDGLIFVVDSND--RER 99
>4XRP-A nrPDB
Length = 312
Score = 31.5 bits (70), Expect = 0.69, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 20/118 (16%)
Query: 42 PTMVIMVGLPARGKTYISTKLTRYL-NWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNME 100
P ++I+VG P GK+ + R NW+ F L Q+ +S F+
Sbjct: 11 PKLLILVGAPGSGKSTFARYFIRTEDNWVRVNRDDFRLMQFGDSLMS----PFY---EER 63
Query: 101 ALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTT-RERRSLILQFAKEHG--YKVF 155
++ + +A LK+ N + DATN++ R + ++ + + +KVF
Sbjct: 64 ITKMVEASVIALLKNRTN---------VIIDATNSSLRSLQDMVHTYTEYADISFKVF 112
>4UZU-A nrPDB
Length = 513
Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Query: 62 LTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQIRKQCALAA--------L 113
+T NW N+ +R +AV + + FF PD + ++ + L +
Sbjct: 210 VTELKNWGKWYVNTTNIDGFRLDAVKHIKFSFF-PDWLSYVRSQTGKPLFTVGEYWSYDI 268
Query: 114 KDVHNYLSHEEGHVAVFDA 132
+HNY++ +G +++FDA
Sbjct: 269 NKLHNYITKTDGTMSLFDA 287
>4C0E-A nrPDB
Length = 528
Score = 31.2 bits (69), Expect = 1.2, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 20 HSSGSSRLQRRRGSSIPQFTNSPTMVIMVGLP-ARGKTYISTKLTRYLNWIGTPTKVFNL 78
+ L + ++ + +++GLP +G + L ++L +G K F +
Sbjct: 181 FDMRPNLLPGFACAWAGLVSHRAFLPVILGLPDEKGWAPFTKLLEQFLGCVGELVKTFTV 240
Query: 79 GQYRREA 85
+E
Sbjct: 241 SSLGKEM 247
>1DJ3-A nrPDB
Length = 442
Score = 30.8 bits (68), Expect = 1.2, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 28/136 (20%)
Query: 273 DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKR-TIQTAEALGVPY--EQWKALNEI 329
D +V G + A +FI + ++S + R ++ + + ++ L E
Sbjct: 126 DLHQTVDGLREAELANSFIGTTKRGIGPCYSSKVTRNGLRVCDLRHMDTFGDKLDVLFED 185
Query: 330 DAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIME-------- 381
A E Y + EE E Y+ +RLEP I +
Sbjct: 186 AAARFEGFKYSKGMLK--EEV---------------ERYKKFAERLEPFIADTVHVLNES 228
Query: 382 LERQENVLVICHQAVM 397
+ +++ +LV QA M
Sbjct: 229 IRQKKKILVEGGQATM 244
>2YVU-A nrPDB
Length = 186
Score = 30.8 bits (68), Expect = 1.2, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Query: 44 MVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQ 103
+V + GLP GKT I+T+L L G +V + G + R VS + F E L+
Sbjct: 15 VVWLTGLPGSGKTTIATRLADLLQKEGYRVEVLD-GDWARTTVS-EGAGFTR---EERLR 69
Query: 104 IRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHG 151
K+ A A L G + + + ++ R+++ + +E G
Sbjct: 70 HLKRIAWIA------RLLARNGVIVICSFVSPYKQARNMVRRIVEEEG 111
>2IYT-A nrPDB
Length = 184
Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 46 IMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEAL-QI 104
++VGLP GK+ I +L + L G ++ +R S + F D + +I
Sbjct: 6 VLVGLPGSGKSTIGRRLAKAL---GVGLLDTDVAIEQRTGRSIA--DIFATDGEQEFRRI 60
Query: 105 RKQCALAALKDVHNYLSHEEGHV 127
+ AAL D LS G V
Sbjct: 61 EEDVVRAALADHDGVLSLGGGAV 83
>1LFP-A nrPDB
Length = 249
Score = 30.4 bits (67), Expect = 1.8, Method: Composition-based stats.
Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
Query: 259 HGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGIS-SLKVWTSHMKRTIQTAEALG 317
G S + RGK ++ + I + + + ++ I+ A+
Sbjct: 2 AGHSHWAQIKHKKAKVD-AQRGKLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKKAN 60
Query: 318 VPYEQWKALNEIDAGVCEEMTYEEI 342
+P+E + + AG E +EE+
Sbjct: 61 MPWENIERAIKKGAGELEGEQFEEV 85
>5L3R-A nrPDB
Length = 301
Score = 30.0 bits (66), Expect = 2.0, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 42 PTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAV 86
PT++++ GL GKT + KL YL G + YR A+
Sbjct: 106 PTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAI 150
>2SHK-A nrPDB
Length = 173
Score = 28.9 bits (63), Expect = 5.0, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 45 VIMVGLPARGKTYISTKLTRYLNWIGTPTKVF---NLGQYRREAVSYKNYEFFLPDNMEA 101
+ MVG GKT + +L R L + T +F G + V+ + + F EA
Sbjct: 5 IFMVGARGCGKTTVGRELARALGYEFVDTDIFMQHTSGMTVADVVAAEGWPGFRRRESEA 64
Query: 102 LQ 103
LQ
Sbjct: 65 LQ 66
>2V3C-C nrPDB
Length = 432
Score = 28.5 bits (62), Expect = 6.6, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 44 MVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREA 85
++++VG+ GKT + KL RY+ G + YR A
Sbjct: 101 VILLVGIQGSGKTTTAAKLARYIQKRGLKPALIAADTYRPAA 142
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.312 0.136 0.375
Lambda K H
0.267 0.0414 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,551,170
Number of Sequences: 36641
Number of extensions: 757514
Number of successful extensions: 2430
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 2251
Number of HSP's gapped (non-prelim): 128
length of query: 471
length of database: 10,336,785
effective HSP length: 101
effective length of query: 370
effective length of database: 6,636,044
effective search space: 2455336280
effective search space used: 2455336280
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 61 (28.1 bits)