BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P16118 (471 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1K6M-A nrPDB 890 0.0 2BIF-A nrPDB 725 0.0 2DWP-A nrPDB 689 0.0 4D4L-A nrPDB 687 0.0 5HTK-A nrPDB 671 0.0 5HR5-A nrPDB 671 0.0 1C7Z-A nrPDB 391 e-109 4IJ6-A nrPDB 62 4e-10 1E58-A nrPDB 52 4e-07 4EO9-A nrPDB 52 6e-07 3PGM-A nrPDB 51 1e-06 1RII-A nrPDB 50 2e-06 6NRU-A nrPDB 50 2e-06 1FZT-A nrPDB 49 4e-06 3KKK-A nrPDB 47 2e-05 5PGM-D nrPDB 46 3e-05 5VVE-A nrPDB 44 2e-04 4ODI-A nrPDB 41 0.001 4EMB-A nrPDB 40 0.002 3GW8-A nrPDB 39 0.005 3D8H-A nrPDB 37 0.015 4PZA-A nrPDB 37 0.016 6BBQ-A nrPDB 37 0.017 2A5F-A nrPDB 36 0.042 5L3R-A nrPDB 35 0.054 3LVQ-E nrPDB 35 0.060 5NZV-F nrPDB 34 0.15 4YLG-A nrPDB 34 0.16 5UF8-A nrPDB 33 0.21 2B6H-A nrPDB 33 0.22 3AQ4-A nrPDB 33 0.28 3DM5-A nrPDB 33 0.31 3O47-A nrPDB 33 0.32 5CIO-A nrPDB 33 0.37 6DFF-C nrPDB 32 0.49 5Y64-B nrPDB 32 0.52 1J2J-A nrPDB 32 0.55 6FAE-B nrPDB 32 0.56 4C5U-A nrPDB 32 0.67 1G7S-A nrPDB 32 0.75 1Z6X-A nrPDB 31 0.96 4UZU-A nrPDB 31 1.3 5YPZ-A nrPDB 31 1.4 3LRP-A nrPDB 30 1.9 1F1O-A nrPDB 30 3.0 3LC3-A nrPDB 30 3.0 1X7A-C nrPDB 29 3.7 2RHQ-B nrPDB 29 4.3 3W15-A nrPDB 29 5.6 >1K6M-A nrPDB Length = 432 Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/432 (98%), Positives = 431/432 (99%) Query: 40 NSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNM 99 NSPTMVIMVGLPARGKTYISTKLTRYLN+IGTPTKVFNLGQYRREAVSYKNYEFFLPDNM Sbjct: 1 NSPTMVIMVGLPARGKTYISTKLTRYLNFIGTPTKVFNLGQYRREAVSYKNYEFFLPDNM 60 Query: 100 EALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIES 159 EALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIES Sbjct: 61 EALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIES 120 Query: 160 ICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIK 219 ICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIK Sbjct: 121 ICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIK 180 Query: 220 IFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVR 279 IFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVR Sbjct: 181 IFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVR 240 Query: 280 GKQYAYALANFIQSQGISSLKVWTSHMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTY 339 GKQYAYALANFIQSQGISSLKV+TS MKRTIQTAEALGVPYEQ+KALNEIDAGVCEEMTY Sbjct: 241 GKQYAYALANFIQSQGISSLKVFTSRMKRTIQTAEALGVPYEQFKALNEIDAGVCEEMTY 300 Query: 340 EEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRC 399 EEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRC Sbjct: 301 EEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRC 360 Query: 400 LLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAVNTHREKPENVDITRE 459 LLAYFLDKSS+ELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAVNTHREKPENVDITRE Sbjct: 361 LLAYFLDKSSEELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAVNTHREKPENVDITRE 420 Query: 460 PEEALDTVPAHY 471 PEEALDTVPAHY Sbjct: 421 PEEALDTVPAHY 432 >2BIF-A nrPDB Length = 469 Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/466 (74%), Positives = 399/466 (85%), Gaps = 5/466 (1%) Query: 7 ELTQTRLQKIWIPHSSGSSRLQ-RRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRY 65 ELTQ L+KI++P+S+G L +RG + TN PT+++MVGLPARGKTYIS KLTRY Sbjct: 6 ELTQNPLKKIFMPYSNGRPALHASQRGVCM---TNCPTLIVMVGLPARGKTYISKKLTRY 62 Query: 66 LNWIGTPTKVFNLGQYRREAV-SYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEE 124 LN+IG PT+ FN+GQYRR+ V +YK++EFFLPDN E L+IRKQCALAAL DV +LS E Sbjct: 63 LNFIGVPTREFNVGQYRRDMVKTYKSFEFFLPDNEEGLKIRKQCALAALNDVRKFLSEEG 122 Query: 125 GHVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDC 184 GHVAVFDATNTTRERR++I F +++GYK FF+ESIC DP +IA NI QVKLGSPDY++ Sbjct: 123 GHVAVFDATNTTRERRAMIFNFGEQNGYKTFFVESICVDPEVIAANIVQVKLGSPDYVNR 182 Query: 185 DREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYL 244 D ++ EDF++RIECYE +Y+ LDEE D LSYIKI DVG Y+VNRV DHIQSR VYYL Sbjct: 183 DSDEATEDFMRRIECYENSYESLDEEQDRDLSYIKIMDVGQSYVVNRVADHIQSRIVYYL 242 Query: 245 MNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTS 304 MNIHVTPRSIYLCR GESELN++GRIGGD GLS RG++++ LA FI Q I LKV+TS Sbjct: 243 MNIHVTPRSIYLCRAGESELNLKGRIGGDPGLSPRGREFSKHLAQFISDQNIKDLKVFTS 302 Query: 305 HMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPK 364 MKRTIQTAEAL VPYEQ+K LNEIDAGVCEEMTYEEIQ+HYP EFALRDQDKYRYRYPK Sbjct: 303 QMKRTIQTAEALSVPYEQFKVLNEIDAGVCEEMTYEEIQDHYPLEFALRDQDKYRYRYPK 362 Query: 365 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLK 424 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDK+++ELPYLKCPLHTVLK Sbjct: 363 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKAAEELPYLKCPLHTVLK 422 Query: 425 LTPVAYGCKVESIYLNVEAVNTHREKPENVDITREPEEALDTVPAH 470 LTPVAYGCKVESI+LNV AVNTHR++P+NVDI+R EEAL TVPAH Sbjct: 423 LTPVAYGCKVESIFLNVAAVNTHRDRPQNVDISRPSEEALVTVPAH 468 >2DWP-A nrPDB Length = 520 Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/450 (71%), Positives = 385/450 (85%), Gaps = 6/450 (1%) Query: 7 ELTQTRLQKIWIPHSSGSSRLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYL 66 ELTQ+R+QKIW+P S L R G P+ TNSPT+++MVGLPARGKTYIS KLTRYL Sbjct: 4 ELTQSRVQKIWVPVDHRPS-LPRSCG---PKLTNSPTVIVMVGLPARGKTYISKKLTRYL 59 Query: 67 NWIGTPTKVFNLGQYRREAVS-YKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEG 125 NWIG PTKVFN+G+YRREAV Y +Y FF PDN EA+++RKQCALAAL+DV +YL+ E G Sbjct: 60 NWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGG 119 Query: 126 HVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCD 185 +AVFDATNTTRERR +IL FAKE+ +K FFIES+C+DP ++A NI +VK+ SPDY DC+ Sbjct: 120 QIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCN 179 Query: 186 REKVLEDFLKRIECYEVNYQPLD-EELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYL 244 + ++DF+KRI CYE +YQPLD ++ D LS IK+ DVG R++VNRVQDHIQSR VYYL Sbjct: 180 SAEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVNRVQDHIQSRIVYYL 239 Query: 245 MNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTS 304 MNIHV PR+IYLCRHGE+E N++GRIGGDSGLS RGK++A AL+ F++ Q + L+VWTS Sbjct: 240 MNIHVQPRTIYLCRHGENEHNLQGRIGGDSGLSSRGKKFASALSKFVEEQNLKDLRVWTS 299 Query: 305 HMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPK 364 +K TIQTAEAL +PYEQWKALNEIDAGVCEE+TYEEI++ YPEE+ALR+QDKY YRYP Sbjct: 300 QLKSTIQTAEALRLPYEQWKALNEIDAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPT 359 Query: 365 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLK 424 GESY+DLVQRLEPVIMELERQENVLVICHQAV+RCLLAYFLDKS++E+PYLKCPLHTVLK Sbjct: 360 GESYQDLVQRLEPVIMELERQENVLVICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLK 419 Query: 425 LTPVAYGCKVESIYLNVEAVNTHREKPENV 454 LTPVAYGC+VESIYLNVE+V THRE+ E+ Sbjct: 420 LTPVAYGCRVESIYLNVESVCTHRERSEDA 449 >4D4L-A nrPDB Length = 449 Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/450 (71%), Positives = 385/450 (85%), Gaps = 6/450 (1%) Query: 7 ELTQTRLQKIWIPHSSGSSRLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYL 66 ELTQ+R+QKIW+P S L R G P+ TNSPT+++MVGLPARGKTYIS KLTRYL Sbjct: 4 ELTQSRVQKIWVPVDHRPS-LPRSCG---PKLTNSPTVIVMVGLPARGKTYISKKLTRYL 59 Query: 67 NWIGTPTKVFNLGQYRREAVS-YKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEG 125 NWIG PTKVFN+G+YRREAV Y +Y FF PDN EA+++RKQCALAAL+DV +YL+ E G Sbjct: 60 NWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGG 119 Query: 126 HVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCD 185 +AVFDATNTTRERR +IL FAKE+ +K FFIES+C+DP ++A NI +VK+ SPDY DC+ Sbjct: 120 QIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCN 179 Query: 186 REKVLEDFLKRIECYEVNYQPLD-EELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYL 244 + ++DF+KRI CYE +YQPLD ++ D LS IK+ DVG R++VNRVQDHIQSR VYYL Sbjct: 180 SAEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVNRVQDHIQSRIVYYL 239 Query: 245 MNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTS 304 MNIHV PR+IYLCRHGE+E N++GRIGGDSGLS RGK++A AL+ F++ Q + L+VWTS Sbjct: 240 MNIHVQPRTIYLCRHGENEHNLQGRIGGDSGLSSRGKKFASALSKFVEEQNLKDLRVWTS 299 Query: 305 HMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPK 364 +K TIQTAEAL +PYEQWKALNEIDAGVCEE+TYEEI++ YPEE+ALR+QDKY YRYP Sbjct: 300 QLKSTIQTAEALRLPYEQWKALNEIDAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPT 359 Query: 365 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLK 424 GESY+DLVQRLEPVIMELERQENVLVICHQAV+RCLLAYFLDKS++E+PYLKCPLHTVLK Sbjct: 360 GESYQDLVQRLEPVIMELERQENVLVICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLK 419 Query: 425 LTPVAYGCKVESIYLNVEAVNTHREKPENV 454 LTPVAYGC+VESIYLNVE+V THRE+ E+ Sbjct: 420 LTPVAYGCRVESIYLNVESVCTHRERSEDA 449 >5HTK-A nrPDB Length = 505 Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/430 (72%), Positives = 369/430 (85%), Gaps = 2/430 (0%) Query: 26 RLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREA 85 R+ ++ S TNSPT+++M+GLPARGKTY+S KLTRYLNWIG PTKVFNLG YRREA Sbjct: 22 RMSEKKCSWASYMTNSPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRREA 81 Query: 86 V-SYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLIL 144 V SYK+Y+FF DN EA++IRKQCAL AL+DV YL+ E G +AVFDATNTTRERR +IL Sbjct: 82 VKSYKSYDFFRHDNEEAMKIRKQCALVALEDVKAYLTEENGQIAVFDATNTTRERRDMIL 141 Query: 145 QFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNY 204 FA+++ +KVFF+ES+C+DP +IA NI +VK+ SPDY + +RE V+EDFLKRIECY+V Y Sbjct: 142 NFAEQNSFKVFFVESVCDDPDVIAANILEVKVSSPDYPERNRENVMEDFLKRIECYKVTY 201 Query: 205 QPLD-EELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESE 263 +PLD + D LS+IK+ +VG R++VNRVQD+IQS+ VYYLMNIHV PR+IYLCRHGESE Sbjct: 202 RPLDPDNYDKDLSFIKVINVGQRFLVNRVQDYIQSKIVYYLMNIHVQPRTIYLCRHGESE 261 Query: 264 LNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQTAEALGVPYEQW 323 N+ G+IGGDSGLSVRGKQ+A AL F++ Q I+ LKVWTS +KRTIQTAE+LGVPYEQW Sbjct: 262 FNLLGKIGGDSGLSVRGKQFAQALRKFLEEQEITDLKVWTSQLKRTIQTAESLGVPYEQW 321 Query: 324 KALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELE 383 K LNEIDAGVCEEMTY EI++ YPEEFALRDQ+KY YRYP GESY+DLVQRLEPVIMELE Sbjct: 322 KILNEIDAGVCEEMTYAEIEKRYPEEFALRDQEKYLYRYPGGESYQDLVQRLEPVIMELE 381 Query: 384 RQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEA 443 RQ NVLVI HQAVMRCLLAYFLDK +DELPYL+CPLHT+ KLTPVAYGCKVE+I LNVEA Sbjct: 382 RQGNVLVISHQAVMRCLLAYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVETIKLNVEA 441 Query: 444 VNTHREKPEN 453 VNTHR+KP N Sbjct: 442 VNTHRDKPTN 451 >5HR5-A nrPDB Length = 531 Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust. Identities = 313/435 (71%), Positives = 370/435 (85%), Gaps = 2/435 (0%) Query: 21 SSGSSRLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQ 80 + S R+ ++ S TNSPT+++M+GLPARGKTY+S KLTRYLNWIG PTKVFNLG Sbjct: 18 TKASLRISEKKCSWASYMTNSPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGV 77 Query: 81 YRREAV-SYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRER 139 YRR+AV SYK+Y+FF DN EA++IRKQCAL ALKDV YL+ E G +AVFDATNTTRER Sbjct: 78 YRRQAVKSYKSYDFFRHDNEEAMKIRKQCALVALKDVKAYLTEESGQIAVFDATNTTRER 137 Query: 140 RSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIEC 199 R LIL FA+E+ +KVFF+ES+C+DP +IA NI +VK+ SPDY + +RE V++DFLKRIEC Sbjct: 138 RDLILNFAEENSFKVFFVESVCDDPDVIAANILEVKVSSPDYPERNRENVMDDFLKRIEC 197 Query: 200 YEVNYQPLD-EELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCR 258 Y+V YQPLD + D LS+IK+ +VG R++VN+VQD+IQS+ VYYLMNIHV PR+IYLCR Sbjct: 198 YKVTYQPLDPDSHDKDLSFIKVINVGQRFLVNKVQDYIQSKIVYYLMNIHVHPRTIYLCR 257 Query: 259 HGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQTAEALGV 318 HGESE N+ G+IGGDSGLSVRGKQ+A AL F++ Q I+ LKVWTS +KRTIQTAE+LGV Sbjct: 258 HGESEFNLLGKIGGDSGLSVRGKQFAQALRKFLEEQEIADLKVWTSQLKRTIQTAESLGV 317 Query: 319 PYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPV 378 YEQWK LNEIDAGVCEEMTY EIQE YP+EFALRD++KY YRYP GESY+DLVQRLEPV Sbjct: 318 TYEQWKILNEIDAGVCEEMTYAEIQEQYPDEFALRDEEKYLYRYPGGESYQDLVQRLEPV 377 Query: 379 IMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIY 438 IMELERQ NVLVI HQAVMRCLLAYFLDK +DELPYL+CPLHT+ KLTPVAYGCKVE+I Sbjct: 378 IMELERQGNVLVISHQAVMRCLLAYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVETIK 437 Query: 439 LNVEAVNTHREKPEN 453 LNVEAVNTHR+KP N Sbjct: 438 LNVEAVNTHRDKPTN 452 >1C7Z-A nrPDB Length = 191 Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust. Identities = 186/190 (97%), Positives = 189/190 (99%) Query: 252 RSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311 RSIYLCRHGESELN+RGRIGGDSGLS RGKQYAYALANFI+SQGISSLKVWTSHMKRTIQ Sbjct: 2 RSIYLCRHGESELNLRGRIGGDSGLSARGKQYAYALANFIRSQGISSLKVWTSHMKRTIQ 61 Query: 312 TAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDL 371 TAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDL Sbjct: 62 TAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDL 121 Query: 372 VQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYG 431 VQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYG Sbjct: 122 VQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYG 181 Query: 432 CKVESIYLNV 441 C+VESIYLNV Sbjct: 182 CRVESIYLNV 191 >4IJ6-A nrPDB Length = 211 Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 11/173 (6%) Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRT-- 309 + L R ESE N GR G D LS RGK+ A LA + + + +++S +KRT Sbjct: 4 LILVRAAESEWNPVGRYQGLLDPDLSERGKKQAKLLAQELSREHLDV--IYSSPLKRTYL 61 Query: 310 --IQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGES 367 ++ AEA + + + EID G+ M EE+ E YPE+F ++ ++ + GES Sbjct: 62 TALEIAEAKNLEVIKEDRIIEIDHGMWSGMLVEEVMEKYPEDFRRWVEEPHKVEFQGGES 121 Query: 368 YEDLVQRLEPVIMELERQ---ENVLVICHQAVMRCLLAYFLDKSSDELPYLKC 417 + R++ + E+ ++ + V+V+ H MR + L + C Sbjct: 122 LASVYNRVKGFLEEVRKRHWNQTVVVVSHTVPMRAMYCALLGVDLSKFWSFGC 174 >1E58-A nrPDB Length = 249 Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 39/204 (19%) Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311 + L RHGES+ N R G D LS +G A A ++ +G S +TS +KR I Sbjct: 5 LVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGYSFDFAYTSVLKRAIH 64 Query: 312 T-------AEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEE--------FAL---- 352 T + +P E+ LNE G + + E E Y +E FA+ Sbjct: 65 TLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPE 124 Query: 353 --RDQDKY-----RY------RYPKGESYEDLVQRLEP-----VIMELERQENVLVICHQ 394 +D ++Y RY P ES + R+ P ++ ++ E V++ H Sbjct: 125 LTKDDERYPGHDPRYAKLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVIIAAHG 184 Query: 395 AVMRCLLAYFLDKSSDELPYLKCP 418 +R L+ Y + S +E+ L P Sbjct: 185 NSLRALVKYLDNMSEEEILELNIP 208 >4EO9-A nrPDB Length = 268 Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 58/235 (24%), Positives = 91/235 (38%), Gaps = 47/235 (20%) Query: 253 SIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTI 310 ++ L RHGES+ N R G D GL+ +G+ A + + ++TS ++R I Sbjct: 29 TLILLRHGESDWNARNLFTGWVDVGLTDKGRAEAVRSGELLAEHNLLPDVLYTSLLRRAI 88 Query: 311 -------QTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRY--- 360 TA+ L +P + LNE G + + + Y EE + + Y Sbjct: 89 TTAHLALDTADWLWIPVRRSWRLNERHYGALQGLDKAVTKARYGEERFMAWRRSYDTPPP 148 Query: 361 --------------RY------PKGESYEDLVQRLEP-----VIMELERQENVLVICHQA 395 RY P E D+V R P ++ +L VL++ H Sbjct: 149 PIEKGSEFSQDADPRYTDIGGGPLTECLADVVTRFLPYFTDVIVPDLRTGRTVLIVAHGN 208 Query: 396 VMRCLLAYFLDKSSDELPYLKCPLHTVLK------LTPVAYGCKVESIYLNVEAV 444 +R L+ + + S DE+ L P L+ L PV G YL+ EA Sbjct: 209 SLRALVKHLDEMSDDEVVGLNVPTGIPLRYDLDADLRPVVPG----GTYLDPEAA 259 >3PGM-A nrPDB Length = 244 Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 39/208 (18%) Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311 + L RHG+SE N + G D LS +G+Q A ++ +G++ L +TS + R IQ Sbjct: 3 LVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKGVNVLVDYTSKLSRAIQ 62 Query: 312 T-------AEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEE--------------- 349 T A+ L +P + LNE G + + + + EE Sbjct: 63 TANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAQTLKKFGEEKFNTYRRSFDVPPPP 122 Query: 350 ------FALRDQDKYRY----RYPKGESYEDLVQRLEP----VIMELERQENVLVICHQA 395 F+ + ++Y+Y P+ ES ++ RL P VI +L + + ++ H Sbjct: 123 IDASSPFSQKGDERYKYVDPNVLPETESLALVIDRLLPYWQDVIAKLVGKTS-MIAAHGN 181 Query: 396 VMRCLLAYFLDKSSDELPYLKCPLHTVL 423 +R L+ + S ++ L P T+L Sbjct: 182 SLRGLVKHLEGISDADIAKLNIPPGTIL 209 >1RII-A nrPDB Length = 265 Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 52/209 (24%), Positives = 82/209 (39%), Gaps = 37/209 (17%) Query: 253 SIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTI 310 S+ L RHGES+ N G D GL+ +G+ A I + ++TS ++R I Sbjct: 6 SLVLLRHGESDWNALNLFTGWVDVGLTDKGQAEAVRSGELIAEHDLLPDVLYTSLLRRAI 65 Query: 311 QT-------AEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRY--- 360 T A+ L +P + LNE G + + E + Y EE + + Y Sbjct: 66 TTAHLALDSADRLWIPVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSYDTPPP 125 Query: 361 --------------RY------PKGESYEDLVQRLEP-----VIMELERQENVLVICHQA 395 RY P E D+V R P ++ +L + VL++ H Sbjct: 126 PIERGSQFSQDADPRYADIGGGPLTECLADVVARFLPYFTDVIVGDLRVGKTVLIVAHGN 185 Query: 396 VMRCLLAYFLDKSSDELPYLKCPLHTVLK 424 +R L+ + S DE+ L P L+ Sbjct: 186 SLRALVKHLDQMSDDEIVGLNIPTGIPLR 214 >6NRU-A nrPDB Length = 206 Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 82/173 (47%), Gaps = 13/173 (7%) Query: 254 IYLCRHGESELNIRGRIGGDSG--LSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311 ++L RHGE++ N+ G G + L+ RG + A L + +S V S ++R Sbjct: 6 LWLIRHGETQANVDGLYSGHAPTPLTARGIEQAQNLHTLLDD--VSFDLVLCSELERAQH 63 Query: 312 TAEAL----GVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYP-KGE 366 TA + +P LNE+ G E + ++ + E ++ D +++ P GE Sbjct: 64 TARLVLSDRQLPVHIIPELNEMFFGDWEMRHHRDLMQEDAENYSAWCND-WQHAIPTNGE 122 Query: 367 SYEDLVQRLEPVIMEL---ERQENVLVICHQAVMRCLLAYFLDKSSDELPYLK 416 ++ QR+E I L + +N+L++ HQ V+ L+A + ++ + + + Sbjct: 123 GFQAFSQRVERFIARLSEYQHYQNILIVSHQGVLSLLIARLIGMPAESMWHFR 175 >1FZT-A nrPDB Length = 211 Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 51/225 (22%), Positives = 92/225 (40%), Gaps = 37/225 (16%) Query: 245 MNIHVTPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVW 302 M P + L RHGESE N G D LS G + A ++S+G + Sbjct: 1 MTTEAAPNLLVLTRHGESEWNKLNLFTGWKDPALSETGIKEAKLGGERLKSRGYKFDIAF 60 Query: 303 TSHMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRY 362 TS ++R +T + + L E+ E + E++ E Y + ++D R ++ Sbjct: 61 TSALQRAQKTCQII---------LEEVGEPNLETIKSEKLNERYYGDLQGLNKDDARKKW 111 Query: 363 ----------------PKGESYEDLVQRLEP-----VIMELERQENVLVICHQAVMRCLL 401 P GES +D +R+ P ++ + + E VL+ H +R L+ Sbjct: 112 GAEQVQIWRRSYDIAPPNGESLKDTAERVLPYYKSTIVPHILKGEKVLIAAHGNSLRALI 171 Query: 402 AYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAVNT 446 + D++ +K L T + P+ Y + Y++ E ++ Sbjct: 172 MDLEGLTGDQI--VKRELATGV---PIVYHLDKDGKYVSKELIDN 211 >3KKK-A nrPDB Length = 258 Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 39/209 (18%) Query: 249 VTPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHM 306 +T ++ L RHGES N + G D LS +G++ A A +++ + V+TS + Sbjct: 9 MTTYTLVLLRHGESTWNKENKFTGWTDVPLSEKGEEEAIAAGKYLKEKNFKFDVVYTSVL 68 Query: 307 KRTI-------QTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEE---------- 349 KR I +TA+ L VP + LNE G + + E + Y EE Sbjct: 69 KRAICTAWNVLKTADLLHVPVVKTWRLNERHCGSLQGLNKSETAKKYGEEQVKIWRRSYD 128 Query: 350 FALRDQDKYRYRYPK---------------GESYEDLVQRLEP-----VIMELERQENVL 389 DK R+P E +D V+R+ P + ++ + V+ Sbjct: 129 IPPPKLDKEDNRWPGHNVVYKNVPKDALPFTECLKDTVERVLPFWFDHIAPDILANKKVM 188 Query: 390 VICHQAVMRCLLAYFLDKSSDELPYLKCP 418 V H +R L+ + + S ++ L P Sbjct: 189 VAAHGNSLRGLVKHLDNLSEADVLELNIP 217 >5PGM-D nrPDB Length = 246 Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 39/204 (19%) Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311 + L RHG+SE N + G D LS +G+Q A ++ + + ++TS + R IQ Sbjct: 3 LVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKKVYPDVLYTSKLSRAIQ 62 Query: 312 T-------AEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEE--------------- 349 T A+ L +P + LNE G + E + + EE Sbjct: 63 TANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKFGEEKFNTYRRSFDVPPPP 122 Query: 350 ------FALRDQDKYRY----RYPKGESYEDLVQRLEP-----VIMELERQENVLVICHQ 394 F+ + ++Y+Y P+ ES ++ RL P + +L + V++ H Sbjct: 123 IDASSPFSQKGDERYKYVDPNVLPETESLALVIDRLLPYWQDVIAKDLLSGKTVMIAAHG 182 Query: 395 AVMRCLLAYFLDKSSDELPYLKCP 418 +R L+ + S ++ L P Sbjct: 183 NSLRGLVKHLEGISDADIAKLNIP 206 >5VVE-A nrPDB Length = 258 Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 53/205 (25%), Positives = 82/205 (40%), Gaps = 41/205 (20%) Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTI- 310 + L RHGESE N + G D GLS G + A + +G +TS +KR I Sbjct: 13 LVLIRHGESEWNKENKFTGWYDCGLSETGLKEAKEAGEILLKEGYEFDLCYTSFLKRAIK 72 Query: 311 ------QTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEF-------------A 351 +T +A+ +P + LNE G + + + E + EE A Sbjct: 73 TLWIALETMDAMYLPVVKHWRLNERHYGALQGLNKTQTAEKHGEEQVKIWRRSYDIPPPA 132 Query: 352 LRDQDKYRY-------------RYPKGESYEDLVQRLEP-----VIMELERQENVLVICH 393 L D+ RY PK ES + V R+ P + ++ + VL+ H Sbjct: 133 LEVTDE-RYPGHERKYQGLTQEELPKTESLKLTVDRVLPYWNDVIAPSVKEGKRVLIAAH 191 Query: 394 QAVMRCLLAYFLDKSSDELPYLKCP 418 +R L+ Y + S +E+ L P Sbjct: 192 GNSLRALVKYLDNISEEEIVELNIP 216 >4ODI-A nrPDB Length = 281 Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 82/211 (38%), Gaps = 46/211 (21%) Query: 243 YLMNIHVTPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLK 300 + N+ ++ L RHGES N R G D LS G+Q A A ++ +G Sbjct: 10 FFGNMAKAKYTLVLIRHGESTWNKENRFTGWTDVPLSPVGEQEAVEAAKALKEKGFEFDV 69 Query: 301 VWTSHMKRTIQT-------AEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEE---F 350 +TS ++R + T + +P + LNE G + + E + +E Sbjct: 70 AYTSVLQRAVVTCWTVLKGTDMCHIPVKSSWRLNERHYGALQGLNKAETAAKHGDEQVKI 129 Query: 351 ALRDQD-------KYRYRYPKG---------------ESYEDLVQR--------LEPVIM 380 R D K R+P E +D V+R + P IM Sbjct: 130 WRRSYDIPPPPLEKSDKRWPGNDAVYKMVPNEALPLTECLKDTVERVLPFWFDHIAPSIM 189 Query: 381 ELERQENVLVICHQAVMRCLLAYFLDKSSDE 411 E +R VLV H +R L+ + LDK SDE Sbjct: 190 EGKR---VLVAAHGNSLRGLVKH-LDKMSDE 216 >4EMB-A nrPDB Length = 274 Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/205 (24%), Positives = 80/205 (39%), Gaps = 41/205 (20%) Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311 + L RHGESE N G D LS +G A ++ +G S ++S + R Sbjct: 30 LVLVRHGESEWNKENLFTGWTDVKLSDKGIDEAVEAGLLLKQEGYSFDIAFSSLLSRAND 89 Query: 312 TAE----ALGVPY----EQWKALNEIDAGVCEEMTYEEIQEHYPEEFAL----------- 352 T LG Y + W+ LNE G + + E Y E+ L Sbjct: 90 TLNIILRELGQSYISVKKTWR-LNERHYGALQGLNKSETAAKYGEDKVLIWRRSYDVPPM 148 Query: 353 ---RDQDKY-----RYRY------PKGESYEDLVQRLEP-----VIMELERQENVLVICH 393 D++ RY++ P E +D V R+ P + E+ + V+V H Sbjct: 149 SLDESDDRHPIKDPRYKHIPKRELPSTECLKDTVARVIPYWTDEIAKEVLEGKKVIVAAH 208 Query: 394 QAVMRCLLAYFLDKSSDELPYLKCP 418 +R L+ YF + S +++ L P Sbjct: 209 GNSLRALVKYFDNLSEEDVLKLNIP 233 >3GW8-A nrPDB Length = 257 Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 74/196 (37%), Gaps = 40/196 (20%) Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311 + L RHGES N R G D L+ +G + A ++ G + +TS +KR I+ Sbjct: 12 LVLIRHGESTWNKENRFTGWVDVDLTEQGNREARQAGQLLKEAGYTFDIAYTSVLKRAIR 71 Query: 312 T-------AEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKY------ 358 T + + VP LNE G + E Y +E L + Y Sbjct: 72 TLWHVQDQMDLMYVPVVHSWRLNERHYGALSGLNKAETAAKYGDEQVLVWRRSYDTPPPA 131 Query: 359 -------------------RYRYPKGESYEDLVQRLEPVIME-----LERQENVLVICHQ 394 R + P E +D V R+ P+ E ++ + VL+ H Sbjct: 132 LEPGDERAPYADPRYAKVPREQLPLTECLKDTVARVLPLWNESIAPAVKAGKQVLIAAHG 191 Query: 395 AVMRCLLAYFLDKSSD 410 +R L+ Y LD SD Sbjct: 192 NSLRALIKY-LDGISD 206 >3D8H-A nrPDB Length = 267 Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust. Identities = 66/240 (27%), Positives = 93/240 (38%), Gaps = 51/240 (21%) Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311 + L RHGESE N R G D LS +G A + +G V+TS +KR I Sbjct: 23 LTLIRHGESEWNKENRFTGWTDVSLSEQGVSEAIEAGRMLLEKGFKFDVVYTSVLKRAIM 82 Query: 312 TA----EALG---VPYEQWKALNEIDAGVCEEMTYEEIQEHYPEE---FALRDQD----- 356 T + LG P LNE G + + E + E+ R D Sbjct: 83 TTWTVLKELGNINCPIINHWRLNERHYGALQGLNKSETASKFGEDQVKIWRRSFDVPPPV 142 Query: 357 --KYRYRYP------KG---------ESYEDLVQRLEP-----VIMELERQENVLVICHQ 394 K R+P KG E +D V+R++P + + ++VLV H Sbjct: 143 LEKSDPRWPGNELIYKGICPSCLPTTECLKDTVERVKPYFEDVIAPSIMSGKSVLVSAHG 202 Query: 395 AVMRCLLAYFLDKSSDE------LPYLKCP----LHTVLKLTPVAYGCKVESIYLNVEAV 444 +R LL Y L+ + E +P CP L LK+T Y E + +EAV Sbjct: 203 NSLRALL-YLLEGMTPEQILEVNIP-TACPLVLELDDYLKVTKKYYLISEEELKAKMEAV 260 >4PZA-A nrPDB Length = 223 Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 11/142 (7%) Query: 252 RSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRT 309 R + + RHG+++ N+ R+ G D+ LS G+ A A A + + L + +S ++R Sbjct: 4 RRLVMLRHGQTDYNVGSRMQGQLDTELSELGRTQAVAAAEVLGKR--QPLLIVSSDLRRA 61 Query: 310 IQTA----EALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYP-EEFALRDQDKYRYRYPK 364 TA E G+ L E G + +T+ +I P A R+ + Sbjct: 62 YDTAVKLGERTGLVVRVDTRLRETHLGDWQGLTHAQIDADAPGARLAWREDATWAPH--G 119 Query: 365 GESYEDLVQRLEPVIMELERQE 386 GES D+ R P++ EL E Sbjct: 120 GESRVDVAARSRPLVAELVASE 141 >6BBQ-A nrPDB Length = 520 Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 6/73 (8%) Query: 26 RLQRRRGSSIPQ-FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRRE 84 R+ ++G + + F N ++M+GL A GKT I KL + PT FN+ E Sbjct: 342 RIANKKGKVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNV-----E 396 Query: 85 AVSYKNYEFFLPD 97 V+YKN +F + D Sbjct: 397 TVTYKNVKFNVWD 409 >2A5F-A nrPDB Length = 175 Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 13/100 (13%) Query: 38 FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97 F N ++M+GL A GKT I KL + PT FN+ E V+YKN +F + D Sbjct: 9 FGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNV-----ETVTYKNVKFNVWD 63 Query: 98 NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTR 137 +IR +Y + +G + V D + R Sbjct: 64 VGGQDKIRPLW--------RHYYTGTQGLIFVVDCADRDR 95 >5L3R-A nrPDB Length = 301 Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 68/179 (37%), Gaps = 40/179 (22%) Query: 37 QFTNS-PTMVIMVGLPARGKTYISTKLTRYLN---------------------------- 67 QF S PT++++ GL GKT + KL YL Sbjct: 100 QFAKSGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQ 159 Query: 68 ------WIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLS 121 GT K ++ + + N + + D LQI K + LKDV +L+ Sbjct: 160 VGVPVYTAGTDVKPADIAKQGLKEAKKNNVDVVIMDTAGRLQIDKGM-MDELKDVKKFLN 218 Query: 122 HEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDP-GIIAENIRQVKLGSP 179 E + V DA T +E +L+ F E G + + D G A ++++V G P Sbjct: 219 PTE-VLLVVDAM-TGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVS-GKP 274 >3LVQ-E nrPDB Length = 497 Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 5/64 (7%) Query: 34 SIPQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEF 93 I +N ++M+GL A GKT I KL + PT FN+ E V+YKN +F Sbjct: 314 GIEGLSNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNV-----ETVTYKNVKF 368 Query: 94 FLPD 97 + D Sbjct: 369 NVWD 372 >5NZV-F nrPDB Length = 181 Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 13/100 (13%) Query: 38 FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97 F N ++MVGL GKT + KL PT FN+ E V YKN F + D Sbjct: 13 FGNKEMRILMVGLDGAGKTTVLYKLKLGEVITTIPTIGFNV-----ETVQYKNISFTVWD 67 Query: 98 NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTR 137 +IR +Y + EG + V D+ + +R Sbjct: 68 VGGQDRIRSLW--------RHYYRNTEGVIFVVDSNDRSR 99 >4YLG-A nrPDB Length = 173 Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 52/128 (40%), Gaps = 14/128 (10%) Query: 32 GSSIPQFTNSPTM-VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKN 90 GS + + M ++MVGL A GKT I KL PT FN+ E V YKN Sbjct: 2 GSWLSKLLGKKEMRILMVGLDAAGKTSILYKLKLGEIVTTIPTIGFNV-----ETVEYKN 56 Query: 91 YEFFLPDNMEALQIR--------KQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSL 142 F + D +IR A+ + D ++ E + N R ++ Sbjct: 57 ISFTVWDVGGQDKIRPLWRHYYQNTQAIIFVVDSNDRDRIGEAREELMKMLNEDEMRNAI 116 Query: 143 ILQFAKEH 150 +L FA +H Sbjct: 117 LLVFANKH 124 >5UF8-A nrPDB Length = 181 Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Query: 38 FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97 F N ++MVGL A GKT I KL PT FN+ E V YKN F + D Sbjct: 13 FGNKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWD 67 >2B6H-A nrPDB Length = 192 Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 14/112 (12%) Query: 31 RGSSIPQFTNSPTM-VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYK 89 RGS + M ++MVGL A GKT I KL PT FN+ E V YK Sbjct: 17 RGSLFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYK 71 Query: 90 NYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRS 141 N F + D +IR +Y + +G + V D+ + R + S Sbjct: 72 NICFTVWDVGGQDKIRPLW--------RHYFQNTQGLIFVVDSNDRERVQES 115 >3AQ4-A nrPDB Length = 184 Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 13/100 (13%) Query: 38 FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97 F ++MVGL A GKT I KL PT FN+ E V YKN F + D Sbjct: 16 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWD 70 Query: 98 NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTR 137 +IR +Y + +G + V D+ + R Sbjct: 71 VGGQDKIRPLW--------RHYFQNTQGLIFVVDSNDRDR 102 >3DM5-A nrPDB Length = 443 Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust. Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 16/115 (13%) Query: 37 QFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYR-------REAVSYK 89 + PT+++MVG+ GKT KL RY G V +R R+ + Sbjct: 95 EIKEKPTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRY 154 Query: 90 NYEFFL-PDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLI 143 + E F P +A+++ K+ +Y + + + D +E ++LI Sbjct: 155 HIEVFGNPQEKDAIKLAKEGV--------DYFKSKGVDIIIVDTAGRHKEDKALI 201 >3O47-A nrPDB Length = 329 Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 13/100 (13%) Query: 38 FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97 F ++MVGL A GKT I KL PT FN+ E V YKN F + D Sbjct: 161 FGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWD 215 Query: 98 NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTR 137 +IR +Y + +G + V D+ + R Sbjct: 216 VGGQDKIRPLW--------RHYFQNTQGLIFVVDSNDRER 247 >5CIO-A nrPDB Length = 793 Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 15/100 (15%) Query: 96 PDNMEALQIRKQCAL-AALKDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKV 154 P + AL + C L AAL+ L+H EGH++V R + +LQ A HG Sbjct: 483 PSSHGALSEEQACGLQAALRPEAAELAHREGHLSV------ERHQGVWLLQLAGSHGLIC 536 Query: 155 FFIESI-----CNDPGII---AENIRQVKLGSPDYIDCDR 186 + + P II A N+R +L + I R Sbjct: 537 HGLNVVNRALTAQPPAIINEAARNLRHAQLKQQNDIAIRR 576 >6DFF-C nrPDB Length = 193 Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 15/99 (15%) Query: 41 SPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNME 100 S ++MVGL A GKT I KL PT FN+ E V YKN F + D Sbjct: 28 SEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWDVGG 82 Query: 101 ALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRER 139 +IR +Y + +G + V D+ + RER Sbjct: 83 LDKIRPLW--------RHYFQNTQGLIFVVDSND--RER 111 >5Y64-B nrPDB Length = 262 Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 11/79 (13%) Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311 + L RHGES N+ R G D+ LS G + A ++ G +TS KR I+ Sbjct: 6 LVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQKRAIR 65 Query: 312 TAEALGVPYEQWKALNEID 330 T W L+ ID Sbjct: 66 TL---------WTVLDAID 75 >1J2J-A nrPDB Length = 166 Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 15/95 (15%) Query: 45 VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQI 104 ++MVGL A GKT I KL PT FN+ E V YKN F + D +I Sbjct: 5 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWDVGGLDKI 59 Query: 105 RKQCALAALKDVHNYLSHEEGHVAVFDATNTTRER 139 R +Y + +G + V D+ + RER Sbjct: 60 RPLW--------RHYFQNTQGLIFVVDSND--RER 84 >6FAE-B nrPDB Length = 213 Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 15/95 (15%) Query: 45 VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQI 104 ++MVGL A GKT I KL PT FN+ E V YKN F + D +I Sbjct: 52 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWDVGGQDKI 106 Query: 105 RKQCALAALKDVHNYLSHEEGHVAVFDATNTTRER 139 R +Y + +G + V D+ + RER Sbjct: 107 RPLW--------RHYFQNTQGLIFVVDSND--RER 131 >4C5U-A nrPDB Length = 707 Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Query: 384 RQENVLVICHQAVMRCLLAYFLDK----SSDELPYLKCPLHTVLKLTPVAYGC 432 R+ N L ++++RCLLA K S DELP +L+L YGC Sbjct: 112 RRTNRLSELQESLIRCLLAGVFTKGCAPSVDELPATATRSAMLLRLNSFTYGC 164 >1G7S-A nrPDB Length = 594 Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 12/133 (9%) Query: 80 QYRREAVSYKNYEFFLPDNMEALQIRKQCALAALKD--VHNYLSHEEGHVAVFDATNTTR 137 QY RE + + P L+++++ L D +++ + ++ +A+ + + Sbjct: 218 QYLREQLKIEEDS---PARGTILEVKEETGLGMTIDAVIYDGILRKDDTIAMMTSKDVIS 274 Query: 138 ER-RSLI----LQFAKEHGYKVFFIESICNDPGI--IAENIRQVKLGSPDYIDCDREKVL 190 R RSL+ L+ +E K ++ + GI +A I V GSP + D EKV Sbjct: 275 TRIRSLLKPRPLEEMRESRKKFQKVDEVVAAAGIKIVAPGIDDVMAGSPLRVVTDPEKVR 334 Query: 191 EDFLKRIECYEVN 203 E+ L IE +++ Sbjct: 335 EEILSEIEDIKID 347 >1Z6X-A nrPDB Length = 180 Score = 31.2 bits (69), Expect = 0.96, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 15/102 (14%) Query: 38 FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97 F ++MVGL A GKT I KL PT FN+ E V YKN F + D Sbjct: 13 FGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNICFTVWD 67 Query: 98 NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRER 139 +IR +Y + +G + V D+ + RER Sbjct: 68 VGGQDRIRPLW--------KHYFQNTQGLIFVVDSND--RER 99 >4UZU-A nrPDB Length = 513 Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 9/79 (11%) Query: 62 LTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQIRKQCALAALKD------ 115 +T NW N+ +R +AV + + FF PD + ++ + L + + Sbjct: 210 VTELKNWGKWYVNTTNIDGFRLDAVKHIKFSFF-PDWLSYVRSQTGKPLFTVGEYWSYDI 268 Query: 116 --VHNYLSHEEGHVAVFDA 132 +HNY++ +G +++FDA Sbjct: 269 NKLHNYITKTDGTMSLFDA 287 >5YPZ-A nrPDB Length = 492 Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust. Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 15/106 (14%) Query: 58 ISTKLTRYLNW-IGTPTKVFNLGQYRREAVSYKNYEF---FLPDNMEALQIRKQCALAAL 113 +ST + ++NW GT T++F +Y + NYEF ++P C A+ Sbjct: 67 MSTNASEFINWGAGTSTRIFFTRKYCISTGTQGNYEFSKDYIP-----------CEEPAI 115 Query: 114 KDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIES 159 + VA + + ER IL F K + + F+ + Sbjct: 116 LSNSDLKIDRIDFVATDNTVGSAIERVDFILTFDKSNANESFYFSN 161 >3LRP-A nrPDB Length = 181 Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 19/104 (18%) Query: 38 FTNSPTMVIMVGLPARGKTYI--STKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFL 95 F ++MVGL A GKT I KL + I PT FN+ E V ++N F + Sbjct: 13 FQKKDVRILMVGLDAAGKTTILYKVKLGEVVTTI--PTIGFNV-----ETVEFRNISFTV 65 Query: 96 PDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRER 139 D +IR +Y S+ +G + V D+ + RER Sbjct: 66 WDVGGQDKIRPLW--------RHYYSNTDGLIFVVDSND--RER 99 >1F1O-A nrPDB Length = 431 Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust. Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 9/93 (9%) Query: 285 YALANFIQSQGISSLKVWTSHMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQE 344 Y L F S + +L V+ +MKR + LG+ Y Q L ID G+ E Y+ +Q Sbjct: 322 YMLNRF--SNIVKNLTVFPENMKRNMD--RTLGLIYSQRVLLALIDTGLTREEAYDTVQP 377 Query: 345 HYPEEFALRDQDKYRYRYPKGESYEDLVQRLEP 377 E A Q +R E+ E + RL P Sbjct: 378 KAME--AWEKQVPFRELV---EAEEKITSRLSP 405 >3LC3-A nrPDB Length = 235 Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 9/63 (14%) Query: 20 HSSGSSRLQRRRGSSIPQFTNSPTMVIMVGL-------PARGKTYISTKLTRYLNWIGTP 72 H G Q G P T + G+ +GK I TK++RY+NWI Sbjct: 174 HEGGRDSCQGDSGG--PHVTEVEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEK 231 Query: 73 TKV 75 TK+ Sbjct: 232 TKL 234 >1X7A-C nrPDB Length = 235 Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 9/63 (14%) Query: 20 HSSGSSRLQRRRGSSIPQFTNSPTMVIMVGL-------PARGKTYISTKLTRYLNWIGTP 72 H G Q G P T + G+ +GK I TK++RY+NWI Sbjct: 174 HEGGKDSCQGDSGG--PHVTEVEGTSFLTGIISWGEECAVKGKYGIYTKVSRYVNWIKEK 231 Query: 73 TKV 75 TK+ Sbjct: 232 TKL 234 >2RHQ-B nrPDB Length = 795 Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust. Identities = 14/51 (27%), Positives = 29/51 (56%) Query: 331 AGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIME 381 AG+ + +TY + + + ++FAL+++ P E++ L Q L P ++E Sbjct: 509 AGLNQAITYSLVSKDHAKDFALQERPTISLLMPMSEAHATLRQSLLPHLIE 559 >3W15-A nrPDB Length = 368 Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust. Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 11/115 (9%) Query: 289 NFIQSQGISSLKVWTSHMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEH--- 345 NF+ S S+K+W+ K+++ T P E K ++ ++A + ++ ++ I ++ Sbjct: 121 NFLSSSWDGSIKIWSPLRKQSLMTLTPR--PLEITKMVDPLNAIILKKKSFTGISKNRNC 178 Query: 346 -YPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRC 399 Y +F+ DQ+ G SY L P + Q N LV + C Sbjct: 179 VYQAQFSPHDQN--LVLSCSGNSYASLFDIRLP---SGKNQNNFLVHSGLEALTC 228 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2BIF-A nrPDB 745 0.0 1K6M-A nrPDB 744 0.0 4D4L-A nrPDB 714 0.0 2DWP-A nrPDB 713 0.0 5HTK-A nrPDB 690 0.0 5HR5-A nrPDB 679 0.0 1C7Z-A nrPDB 293 1e-79 4EO9-A nrPDB 227 7e-60 1RII-A nrPDB 220 9e-58 1FZT-A nrPDB 217 7e-57 4ODI-A nrPDB 216 3e-56 3KKK-A nrPDB 212 2e-55 5PGM-D nrPDB 206 2e-53 1E58-A nrPDB 206 3e-53 5VVE-A nrPDB 202 3e-52 3PGM-A nrPDB 200 1e-51 4IJ6-A nrPDB 181 4e-46 6NRU-A nrPDB 178 5e-45 Sequences not found previously or not previously below threshold: 3GW8-A nrPDB 197 1e-50 4EMB-A nrPDB 188 5e-48 5Y64-B nrPDB 185 3e-47 3D8H-A nrPDB 182 3e-46 5UM0-A nrPDB 180 2e-45 3NFY-A nrPDB 160 1e-39 4PZA-A nrPDB 91 8e-19 3E9D-A nrPDB 84 1e-16 3HJG-A nrPDB 78 1e-14 3LG2-A nrPDB 73 2e-13 3R7A-A nrPDB 64 1e-10 3DCY-A nrPDB 64 1e-10 2YN2-A nrPDB 59 4e-09 3F2I-A nrPDB 49 5e-06 6BBQ-A nrPDB 44 1e-04 3LVQ-E nrPDB 42 4e-04 2A5F-A nrPDB 41 0.001 4YLG-A nrPDB 36 0.028 3DM5-A nrPDB 35 0.056 6FAE-B nrPDB 35 0.065 5UF8-A nrPDB 35 0.065 3O47-A nrPDB 35 0.067 6DFF-C nrPDB 35 0.082 1J2J-A nrPDB 35 0.082 5NZV-F nrPDB 35 0.084 3AQ4-A nrPDB 35 0.10 2B6H-A nrPDB 33 0.22 6E3B-A nrPDB 33 0.30 1Z6X-A nrPDB 33 0.38 3LRP-A nrPDB 32 0.67 4XRP-A nrPDB 32 0.69 4UZU-A nrPDB 31 1.1 4C0E-A nrPDB 31 1.2 1DJ3-A nrPDB 31 1.2 2YVU-A nrPDB 31 1.2 2IYT-A nrPDB 31 1.3 1LFP-A nrPDB 30 1.8 5L3R-A nrPDB 30 2.0 2SHK-A nrPDB 29 5.0 2V3C-C nrPDB 28 6.6 >2BIF-A nrPDB Length = 469 Score = 745 bits (1923), Expect = 0.0, Method: Composition-based stats. Identities = 347/466 (74%), Positives = 398/466 (85%), Gaps = 5/466 (1%) Query: 7 ELTQTRLQKIWIPHSSGSSRLQ-RRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRY 65 ELTQ L+KI++P+S+G L +RG TN PT+++MVGLPARGKTYIS KLTRY Sbjct: 6 ELTQNPLKKIFMPYSNGRPALHASQRGVC---MTNCPTLIVMVGLPARGKTYISKKLTRY 62 Query: 66 LNWIGTPTKVFNLGQYRREAV-SYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEE 124 LN+IG PT+ FN+GQYRR+ V +YK++EFFLPDN E L+IRKQCALAAL DV +LS E Sbjct: 63 LNFIGVPTREFNVGQYRRDMVKTYKSFEFFLPDNEEGLKIRKQCALAALNDVRKFLSEEG 122 Query: 125 GHVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDC 184 GHVAVFDATNTTRERR++I F +++GYK FF+ESIC DP +IA NI QVKLGSPDY++ Sbjct: 123 GHVAVFDATNTTRERRAMIFNFGEQNGYKTFFVESICVDPEVIAANIVQVKLGSPDYVNR 182 Query: 185 DREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYL 244 D ++ EDF++RIECYE +Y+ LDEE D LSYIKI DVG Y+VNRV DHIQSR VYYL Sbjct: 183 DSDEATEDFMRRIECYENSYESLDEEQDRDLSYIKIMDVGQSYVVNRVADHIQSRIVYYL 242 Query: 245 MNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTS 304 MNIHVTPRSIYLCR GESELN++GRIGGD GLS RG++++ LA FI Q I LKV+TS Sbjct: 243 MNIHVTPRSIYLCRAGESELNLKGRIGGDPGLSPRGREFSKHLAQFISDQNIKDLKVFTS 302 Query: 305 HMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPK 364 MKRTIQTAEAL VPYEQ+K LNEIDAGVCEEMTYEEIQ+HYP EFALRDQDKYRYRYPK Sbjct: 303 QMKRTIQTAEALSVPYEQFKVLNEIDAGVCEEMTYEEIQDHYPLEFALRDQDKYRYRYPK 362 Query: 365 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLK 424 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDK+++ELPYLKCPLHTVLK Sbjct: 363 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKAAEELPYLKCPLHTVLK 422 Query: 425 LTPVAYGCKVESIYLNVEAVNTHREKPENVDITREPEEALDTVPAH 470 LTPVAYGCKVESI+LNV AVNTHR++P+NVDI+R EEAL TVPAH Sbjct: 423 LTPVAYGCKVESIFLNVAAVNTHRDRPQNVDISRPSEEALVTVPAH 468 >1K6M-A nrPDB Length = 432 Score = 744 bits (1921), Expect = 0.0, Method: Composition-based stats. Identities = 427/432 (98%), Positives = 431/432 (99%) Query: 40 NSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNM 99 NSPTMVIMVGLPARGKTYISTKLTRYLN+IGTPTKVFNLGQYRREAVSYKNYEFFLPDNM Sbjct: 1 NSPTMVIMVGLPARGKTYISTKLTRYLNFIGTPTKVFNLGQYRREAVSYKNYEFFLPDNM 60 Query: 100 EALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIES 159 EALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIES Sbjct: 61 EALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIES 120 Query: 160 ICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIK 219 ICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIK Sbjct: 121 ICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIK 180 Query: 220 IFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVR 279 IFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVR Sbjct: 181 IFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVR 240 Query: 280 GKQYAYALANFIQSQGISSLKVWTSHMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTY 339 GKQYAYALANFIQSQGISSLKV+TS MKRTIQTAEALGVPYEQ+KALNEIDAGVCEEMTY Sbjct: 241 GKQYAYALANFIQSQGISSLKVFTSRMKRTIQTAEALGVPYEQFKALNEIDAGVCEEMTY 300 Query: 340 EEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRC 399 EEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRC Sbjct: 301 EEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRC 360 Query: 400 LLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAVNTHREKPENVDITRE 459 LLAYFLDKSS+ELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAVNTHREKPENVDITRE Sbjct: 361 LLAYFLDKSSEELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAVNTHREKPENVDITRE 420 Query: 460 PEEALDTVPAHY 471 PEEALDTVPAHY Sbjct: 421 PEEALDTVPAHY 432 >4D4L-A nrPDB Length = 449 Score = 714 bits (1843), Expect = 0.0, Method: Composition-based stats. Identities = 321/450 (71%), Positives = 385/450 (85%), Gaps = 6/450 (1%) Query: 7 ELTQTRLQKIWIPHSSGSSRLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYL 66 ELTQ+R+QKIW+P S L R G P+ TNSPT+++MVGLPARGKTYIS KLTRYL Sbjct: 4 ELTQSRVQKIWVPVDHRPS-LPRSCG---PKLTNSPTVIVMVGLPARGKTYISKKLTRYL 59 Query: 67 NWIGTPTKVFNLGQYRREAVS-YKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEG 125 NWIG PTKVFN+G+YRREAV Y +Y FF PDN EA+++RKQCALAAL+DV +YL+ E G Sbjct: 60 NWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGG 119 Query: 126 HVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCD 185 +AVFDATNTTRERR +IL FAKE+ +K FFIES+C+DP ++A NI +VK+ SPDY DC+ Sbjct: 120 QIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCN 179 Query: 186 REKVLEDFLKRIECYEVNYQPLD-EELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYL 244 + ++DF+KRI CYE +YQPLD ++ D LS IK+ DVG R++VNRVQDHIQSR VYYL Sbjct: 180 SAEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVNRVQDHIQSRIVYYL 239 Query: 245 MNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTS 304 MNIHV PR+IYLCRHGE+E N++GRIGGDSGLS RGK++A AL+ F++ Q + L+VWTS Sbjct: 240 MNIHVQPRTIYLCRHGENEHNLQGRIGGDSGLSSRGKKFASALSKFVEEQNLKDLRVWTS 299 Query: 305 HMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPK 364 +K TIQTAEAL +PYEQWKALNEIDAGVCEE+TYEEI++ YPEE+ALR+QDKY YRYP Sbjct: 300 QLKSTIQTAEALRLPYEQWKALNEIDAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPT 359 Query: 365 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLK 424 GESY+DLVQRLEPVIMELERQENVLVICHQAV+RCLLAYFLDKS++E+PYLKCPLHTVLK Sbjct: 360 GESYQDLVQRLEPVIMELERQENVLVICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLK 419 Query: 425 LTPVAYGCKVESIYLNVEAVNTHREKPENV 454 LTPVAYGC+VESIYLNVE+V THRE+ E+ Sbjct: 420 LTPVAYGCRVESIYLNVESVCTHRERSEDA 449 >2DWP-A nrPDB Length = 520 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 321/450 (71%), Positives = 385/450 (85%), Gaps = 6/450 (1%) Query: 7 ELTQTRLQKIWIPHSSGSSRLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYL 66 ELTQ+R+QKIW+P S L R G P+ TNSPT+++MVGLPARGKTYIS KLTRYL Sbjct: 4 ELTQSRVQKIWVPVDHRPS-LPRSCG---PKLTNSPTVIVMVGLPARGKTYISKKLTRYL 59 Query: 67 NWIGTPTKVFNLGQYRREAVS-YKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEG 125 NWIG PTKVFN+G+YRREAV Y +Y FF PDN EA+++RKQCALAAL+DV +YL+ E G Sbjct: 60 NWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGG 119 Query: 126 HVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCD 185 +AVFDATNTTRERR +IL FAKE+ +K FFIES+C+DP ++A NI +VK+ SPDY DC+ Sbjct: 120 QIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCN 179 Query: 186 REKVLEDFLKRIECYEVNYQPLD-EELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYL 244 + ++DF+KRI CYE +YQPLD ++ D LS IK+ DVG R++VNRVQDHIQSR VYYL Sbjct: 180 SAEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVNRVQDHIQSRIVYYL 239 Query: 245 MNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTS 304 MNIHV PR+IYLCRHGE+E N++GRIGGDSGLS RGK++A AL+ F++ Q + L+VWTS Sbjct: 240 MNIHVQPRTIYLCRHGENEHNLQGRIGGDSGLSSRGKKFASALSKFVEEQNLKDLRVWTS 299 Query: 305 HMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPK 364 +K TIQTAEAL +PYEQWKALNEIDAGVCEE+TYEEI++ YPEE+ALR+QDKY YRYP Sbjct: 300 QLKSTIQTAEALRLPYEQWKALNEIDAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPT 359 Query: 365 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLK 424 GESY+DLVQRLEPVIMELERQENVLVICHQAV+RCLLAYFLDKS++E+PYLKCPLHTVLK Sbjct: 360 GESYQDLVQRLEPVIMELERQENVLVICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLK 419 Query: 425 LTPVAYGCKVESIYLNVEAVNTHREKPENV 454 LTPVAYGC+VESIYLNVE+V THRE+ E+ Sbjct: 420 LTPVAYGCRVESIYLNVESVCTHRERSEDA 449 >5HTK-A nrPDB Length = 505 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 312/430 (72%), Positives = 369/430 (85%), Gaps = 2/430 (0%) Query: 26 RLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREA 85 R+ ++ S TNSPT+++M+GLPARGKTY+S KLTRYLNWIG PTKVFNLG YRREA Sbjct: 22 RMSEKKCSWASYMTNSPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRREA 81 Query: 86 V-SYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLIL 144 V SYK+Y+FF DN EA++IRKQCAL AL+DV YL+ E G +AVFDATNTTRERR +IL Sbjct: 82 VKSYKSYDFFRHDNEEAMKIRKQCALVALEDVKAYLTEENGQIAVFDATNTTRERRDMIL 141 Query: 145 QFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNY 204 FA+++ +KVFF+ES+C+DP +IA NI +VK+ SPDY + +RE V+EDFLKRIECY+V Y Sbjct: 142 NFAEQNSFKVFFVESVCDDPDVIAANILEVKVSSPDYPERNRENVMEDFLKRIECYKVTY 201 Query: 205 QPLD-EELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESE 263 +PLD + D LS+IK+ +VG R++VNRVQD+IQS+ VYYLMNIHV PR+IYLCRHGESE Sbjct: 202 RPLDPDNYDKDLSFIKVINVGQRFLVNRVQDYIQSKIVYYLMNIHVQPRTIYLCRHGESE 261 Query: 264 LNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQTAEALGVPYEQW 323 N+ G+IGGDSGLSVRGKQ+A AL F++ Q I+ LKVWTS +KRTIQTAE+LGVPYEQW Sbjct: 262 FNLLGKIGGDSGLSVRGKQFAQALRKFLEEQEITDLKVWTSQLKRTIQTAESLGVPYEQW 321 Query: 324 KALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELE 383 K LNEIDAGVCEEMTY EI++ YPEEFALRDQ+KY YRYP GESY+DLVQRLEPVIMELE Sbjct: 322 KILNEIDAGVCEEMTYAEIEKRYPEEFALRDQEKYLYRYPGGESYQDLVQRLEPVIMELE 381 Query: 384 RQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEA 443 RQ NVLVI HQAVMRCLLAYFLDK +DELPYL+CPLHT+ KLTPVAYGCKVE+I LNVEA Sbjct: 382 RQGNVLVISHQAVMRCLLAYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVETIKLNVEA 441 Query: 444 VNTHREKPEN 453 VNTHR+KP N Sbjct: 442 VNTHRDKPTN 451 >5HR5-A nrPDB Length = 531 Score = 679 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 312/430 (72%), Positives = 368/430 (85%), Gaps = 2/430 (0%) Query: 26 RLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREA 85 R+ ++ S TNSPT+++M+GLPARGKTY+S KLTRYLNWIG PTKVFNLG YRR+A Sbjct: 23 RISEKKCSWASYMTNSPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRRQA 82 Query: 86 V-SYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLIL 144 V SYK+Y+FF DN EA++IRKQCAL ALKDV YL+ E G +AVFDATNTTRERR LIL Sbjct: 83 VKSYKSYDFFRHDNEEAMKIRKQCALVALKDVKAYLTEESGQIAVFDATNTTRERRDLIL 142 Query: 145 QFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNY 204 FA+E+ +KVFF+ES+C+DP +IA NI +VK+ SPDY + +RE V++DFLKRIECY+V Y Sbjct: 143 NFAEENSFKVFFVESVCDDPDVIAANILEVKVSSPDYPERNRENVMDDFLKRIECYKVTY 202 Query: 205 QPLD-EELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESE 263 QPLD + D LS+IK+ +VG R++VN+VQD+IQS+ VYYLMNIHV PR+IYLCRHGESE Sbjct: 203 QPLDPDSHDKDLSFIKVINVGQRFLVNKVQDYIQSKIVYYLMNIHVHPRTIYLCRHGESE 262 Query: 264 LNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQTAEALGVPYEQW 323 N+ G+IGGDSGLSVRGKQ+A AL F++ Q I+ LKVWTS +KRTIQTAE+LGV YEQW Sbjct: 263 FNLLGKIGGDSGLSVRGKQFAQALRKFLEEQEIADLKVWTSQLKRTIQTAESLGVTYEQW 322 Query: 324 KALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELE 383 K LNEIDAGVCEEMTY EIQE YP+EFALRD++KY YRYP GESY+DLVQRLEPVIMELE Sbjct: 323 KILNEIDAGVCEEMTYAEIQEQYPDEFALRDEEKYLYRYPGGESYQDLVQRLEPVIMELE 382 Query: 384 RQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEA 443 RQ NVLVI HQAVMRCLLAYFLDK +DELPYL+CPLHT+ KLTPVAYGCKVE+I LNVEA Sbjct: 383 RQGNVLVISHQAVMRCLLAYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVETIKLNVEA 442 Query: 444 VNTHREKPEN 453 VNTHR+KP N Sbjct: 443 VNTHRDKPTN 452 >1C7Z-A nrPDB Length = 191 Score = 293 bits (750), Expect = 1e-79, Method: Composition-based stats. Identities = 186/190 (97%), Positives = 189/190 (99%) Query: 252 RSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311 RSIYLCRHGESELN+RGRIGGDSGLS RGKQYAYALANFI+SQGISSLKVWTSHMKRTIQ Sbjct: 2 RSIYLCRHGESELNLRGRIGGDSGLSARGKQYAYALANFIRSQGISSLKVWTSHMKRTIQ 61 Query: 312 TAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDL 371 TAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDL Sbjct: 62 TAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDL 121 Query: 372 VQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYG 431 VQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYG Sbjct: 122 VQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYG 181 Query: 432 CKVESIYLNV 441 C+VESIYLNV Sbjct: 182 CRVESIYLNV 191 >4EO9-A nrPDB Length = 268 Score = 227 bits (579), Expect = 7e-60, Method: Composition-based stats. Identities = 58/235 (24%), Positives = 91/235 (38%), Gaps = 47/235 (20%) Query: 253 SIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTI 310 ++ L RHGES+ N R G D GL+ +G+ A + + ++TS ++R I Sbjct: 29 TLILLRHGESDWNARNLFTGWVDVGLTDKGRAEAVRSGELLAEHNLLPDVLYTSLLRRAI 88 Query: 311 -------QTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRY--- 360 TA+ L +P + LNE G + + + Y EE + + Y Sbjct: 89 TTAHLALDTADWLWIPVRRSWRLNERHYGALQGLDKAVTKARYGEERFMAWRRSYDTPPP 148 Query: 361 --------------RY------PKGESYEDLVQRLEP-----VIMELERQENVLVICHQA 395 RY P E D+V R P ++ +L VL++ H Sbjct: 149 PIEKGSEFSQDADPRYTDIGGGPLTECLADVVTRFLPYFTDVIVPDLRTGRTVLIVAHGN 208 Query: 396 VMRCLLAYFLDKSSDELPYLKCPLHTVLK------LTPVAYGCKVESIYLNVEAV 444 +R L+ + + S DE+ L P L+ L PV G YL+ EA Sbjct: 209 SLRALVKHLDEMSDDEVVGLNVPTGIPLRYDLDADLRPVVPG----GTYLDPEAA 259 >1RII-A nrPDB Length = 265 Score = 220 bits (561), Expect = 9e-58, Method: Composition-based stats. Identities = 57/233 (24%), Positives = 90/233 (38%), Gaps = 47/233 (20%) Query: 253 SIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTI 310 S+ L RHGES+ N G D GL+ +G+ A I + ++TS ++R I Sbjct: 6 SLVLLRHGESDWNALNLFTGWVDVGLTDKGQAEAVRSGELIAEHDLLPDVLYTSLLRRAI 65 Query: 311 QTA-------EALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRY--- 360 TA + L +P + LNE G + + E + Y EE + + Y Sbjct: 66 TTAHLALDSADRLWIPVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSYDTPPP 125 Query: 361 --------------RY------PKGESYEDLVQRLEP-----VIMELERQENVLVICHQA 395 RY P E D+V R P ++ +L + VL++ H Sbjct: 126 PIERGSQFSQDADPRYADIGGGPLTECLADVVARFLPYFTDVIVGDLRVGKTVLIVAHGN 185 Query: 396 VMRCLLAYFLDKSSDELPYLKCPLHTVLK------LTPVAYGCKVESIYLNVE 442 +R L+ + S DE+ L P L+ + P+ G YL+ E Sbjct: 186 SLRALVKHLDQMSDDEIVGLNIPTGIPLRYDLDSAMRPLVRG----GTYLDPE 234 >1FZT-A nrPDB Length = 211 Score = 217 bits (553), Expect = 7e-57, Method: Composition-based stats. Identities = 49/216 (22%), Positives = 92/216 (42%), Gaps = 19/216 (8%) Query: 245 MNIHVTPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVW 302 M P + L RHGESE N G D LS G + A ++S+G + Sbjct: 1 MTTEAAPNLLVLTRHGESEWNKLNLFTGWKDPALSETGIKEAKLGGERLKSRGYKFDIAF 60 Query: 303 TSHMKRTIQTAEAL-------GVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQ 355 TS ++R +T + + + + + LNE G + + ++ ++ + E + Sbjct: 61 TSALQRAQKTCQIILEEVGEPNLETIKSEKLNERYYGDLQGLNKDDARKKWGAEQVQIWR 120 Query: 356 DKYRYRYPKGESYEDLVQRLEP-----VIMELERQENVLVICHQAVMRCLLAYFLDKSSD 410 Y P GES +D +R+ P ++ + + E VL+ H +R L+ + D Sbjct: 121 RSYDIAPPNGESLKDTAERVLPYYKSTIVPHILKGEKVLIAAHGNSLRALIMDLEGLTGD 180 Query: 411 ELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAVNT 446 ++ +K L T + P+ Y + Y++ E ++ Sbjct: 181 QI--VKRELATGV---PIVYHLDKDGKYVSKELIDN 211 >4ODI-A nrPDB Length = 281 Score = 216 bits (549), Expect = 3e-56, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 93/260 (35%), Gaps = 48/260 (18%) Query: 243 YLMNIHVTPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLK 300 + N+ ++ L RHGES N R G D LS G+Q A A ++ +G Sbjct: 10 FFGNMAKAKYTLVLIRHGESTWNKENRFTGWTDVPLSPVGEQEAVEAAKALKEKGFEFDV 69 Query: 301 VWTSHMKRTIQTA-------EALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALR 353 +TS ++R + T + +P + LNE G + + E + +E Sbjct: 70 AYTSVLQRAVVTCWTVLKGTDMCHIPVKSSWRLNERHYGALQGLNKAETAAKHGDEQVKI 129 Query: 354 DQDKY----------RYRYPK---------------GESYEDLVQRLEP-----VIMELE 383 + Y R+P E +D V+R+ P + + Sbjct: 130 WRRSYDIPPPPLEKSDKRWPGNDAVYKMVPNEALPLTECLKDTVERVLPFWFDHIAPSIM 189 Query: 384 RQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVL------KLTPV--AYGCKVE 435 + VLV H +R L+ + S + + L P L L PV Y Sbjct: 190 EGKRVLVAAHGNSLRGLVKHLDKMSDEAVLELNIPTGVPLVYELDEDLQPVRHYYLLDEA 249 Query: 436 SIYLNVEAVNTH-REKPENV 454 + +EAV + K EN+ Sbjct: 250 ELKAKMEAVANQGKAKGENL 269 >3KKK-A nrPDB Length = 258 Score = 212 bits (540), Expect = 2e-55, Method: Composition-based stats. Identities = 56/240 (23%), Positives = 96/240 (40%), Gaps = 45/240 (18%) Query: 249 VTPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHM 306 +T ++ L RHGES N + G D LS +G++ A A +++ + V+TS + Sbjct: 9 MTTYTLVLLRHGESTWNKENKFTGWTDVPLSEKGEEEAIAAGKYLKEKNFKFDVVYTSVL 68 Query: 307 KRTI-------QTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQ---- 355 KR I +TA+ L VP + LNE G + + E + Y EE + Sbjct: 69 KRAICTAWNVLKTADLLHVPVVKTWRLNERHCGSLQGLNKSETAKKYGEEQVKIWRRSYD 128 Query: 356 ------DKYRYRYPK---------------GESYEDLVQRLEP-----VIMELERQENVL 389 DK R+P E +D V+R+ P + ++ + V+ Sbjct: 129 IPPPKLDKEDNRWPGHNVVYKNVPKDALPFTECLKDTVERVLPFWFDHIAPDILANKKVM 188 Query: 390 VICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVL------KLTPVAYGCKVESIYLNVEA 443 V H +R L+ + + S ++ L P L L P+ + ++S L + Sbjct: 189 VAAHGNSLRGLVKHLDNLSEADVLELNIPTGVPLVYELDENLKPIKHYYLLDSEELKKKM 248 >5PGM-D nrPDB Length = 246 Score = 206 bits (524), Expect = 2e-53, Method: Composition-based stats. Identities = 54/234 (23%), Positives = 91/234 (38%), Gaps = 50/234 (21%) Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311 + L RHG+SE N + G D LS +G+Q A ++ + + ++TS + R IQ Sbjct: 3 LVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKKVYPDVLYTSKLSRAIQ 62 Query: 312 TA-------EALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEE--------------- 349 TA + L +P + LNE G + E + + EE Sbjct: 63 TANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKFGEEKFNTYRRSFDVPPPP 122 Query: 350 ------FALRDQDKYRY----RYPKGESYEDLVQRLEP-----VIMELERQENVLVICHQ 394 F+ + ++Y+Y P+ ES ++ RL P + +L + V++ H Sbjct: 123 IDASSPFSQKGDERYKYVDPNVLPETESLALVIDRLLPYWQDVIAKDLLSGKTVMIAAHG 182 Query: 395 AVMRCLLAYFLDKSSDELPYLKCPLHTVL------KLTPVAYGCKVESIYLNVE 442 +R L+ + S ++ L P L L P S YL+ E Sbjct: 183 NSLRGLVKHLEGISDADIAKLNIPTGIPLVFELDENLKP-----SKPSYYLDPE 231 >1E58-A nrPDB Length = 249 Score = 206 bits (523), Expect = 3e-53, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 81/209 (38%), Gaps = 39/209 (18%) Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311 + L RHGES+ N R G D LS +G A A ++ +G S +TS +KR I Sbjct: 5 LVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKLLKEEGYSFDFAYTSVLKRAIH 64 Query: 312 TA-------EALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQ--------- 355 T + +P E+ LNE G + + E E Y +E + + Sbjct: 65 TLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAVTPPE 124 Query: 356 ---DKYRY-------------RYPKGESYEDLVQRLEP-----VIMELERQENVLVICHQ 394 D RY P ES + R+ P ++ ++ E V++ H Sbjct: 125 LTKDDERYPGHDPRYAKLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERVIIAAHG 184 Query: 395 AVMRCLLAYFLDKSSDELPYLKCPLHTVL 423 +R L+ Y + S +E+ L P L Sbjct: 185 NSLRALVKYLDNMSEEEILELNIPTGVPL 213 >5VVE-A nrPDB Length = 258 Score = 202 bits (514), Expect = 3e-52, Method: Composition-based stats. Identities = 50/211 (23%), Positives = 79/211 (37%), Gaps = 39/211 (18%) Query: 252 RSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRT 309 + L RHGESE N + G D GLS G + A + +G +TS +KR Sbjct: 11 YKLVLIRHGESEWNKENKFTGWYDCGLSETGLKEAKEAGEILLKEGYEFDLCYTSFLKRA 70 Query: 310 I-------QTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRY-- 360 I +T +A+ +P + LNE G + + + E + EE + Y Sbjct: 71 IKTLWIALETMDAMYLPVVKHWRLNERHYGALQGLNKTQTAEKHGEEQVKIWRRSYDIPP 130 Query: 361 -----------------------RYPKGESYEDLVQRLEP-----VIMELERQENVLVIC 392 PK ES + V R+ P + ++ + VL+ Sbjct: 131 PALEVTDERYPGHERKYQGLTQEELPKTESLKLTVDRVLPYWNDVIAPSVKEGKRVLIAA 190 Query: 393 HQAVMRCLLAYFLDKSSDELPYLKCPLHTVL 423 H +R L+ Y + S +E+ L P L Sbjct: 191 HGNSLRALVKYLDNISEEEIVELNIPTGVPL 221 >3PGM-A nrPDB Length = 244 Score = 200 bits (509), Expect = 1e-51, Method: Composition-based stats. Identities = 54/232 (23%), Positives = 93/232 (40%), Gaps = 48/232 (20%) Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311 + L RHG+SE N + G D LS +G+Q A ++ +G++ L +TS + R IQ Sbjct: 3 LVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKGVNVLVDYTSKLSRAIQ 62 Query: 312 TA-------EALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEE--------------- 349 TA + L +P + LNE G + + + + EE Sbjct: 63 TANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAQTLKKFGEEKFNTYRRSFDVPPPP 122 Query: 350 ------FALRDQDKYRY----RYPKGESYEDLVQRLEPVIMEL---ERQENVLVICHQAV 396 F+ + ++Y+Y P+ ES ++ RL P ++ + ++ H Sbjct: 123 IDASSPFSQKGDERYKYVDPNVLPETESLALVIDRLLPYWQDVIAKLVGKTSMIAAHGNS 182 Query: 397 MRCLLAYFLDKSSDELPYLKCPLHTVL------KLTPVAYGCKVESIYLNVE 442 +R L+ + S ++ L P T+L L P S YL+ E Sbjct: 183 LRGLVKHLEGISDADIAKLNIPPGTILVFELDENLKP-----SKPSYYLDPE 229 >3GW8-A nrPDB Length = 257 Score = 197 bits (500), Expect = 1e-50, Method: Composition-based stats. Identities = 50/222 (22%), Positives = 78/222 (35%), Gaps = 45/222 (20%) Query: 252 RSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRT 309 + L RHGES N R G D L+ +G + A ++ G + +TS +KR Sbjct: 10 YKLVLIRHGESTWNKENRFTGWVDVDLTEQGNREARQAGQLLKEAGYTFDIAYTSVLKRA 69 Query: 310 IQT-------AEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRY-- 360 I+T + + VP LNE G + E Y +E L + Y Sbjct: 70 IRTLWHVQDQMDLMYVPVVHSWRLNERHYGALSGLNKAETAAKYGDEQVLVWRRSYDTPP 129 Query: 361 -----------------------RYPKGESYEDLVQRLEP-----VIMELERQENVLVIC 392 + P E +D V R+ P + ++ + VL+ Sbjct: 130 PALEPGDERAPYADPRYAKVPREQLPLTECLKDTVARVLPLWNESIAPAVKAGKQVLIAA 189 Query: 393 HQAVMRCLLAYFLDKSSDELPYLKCPLHTVL------KLTPV 428 H +R L+ Y S ++ L P L LTP+ Sbjct: 190 HGNSLRALIKYLDGISDADIVGLNIPNGVPLVYELDESLTPI 231 >4EMB-A nrPDB Length = 274 Score = 188 bits (477), Expect = 5e-48, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 77/223 (34%), Gaps = 44/223 (19%) Query: 252 RSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRT 309 + L RHGESE N G D LS +G A ++ +G S ++S + R Sbjct: 28 YKLVLVRHGESEWNKENLFTGWTDVKLSDKGIDEAVEAGLLLKQEGYSFDIAFSSLLSRA 87 Query: 310 IQTAEAL-------GVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRY-- 360 T + + ++ LNE G + + E Y E+ L + Y Sbjct: 88 NDTLNIILRELGQSYISVKKTWRLNERHYGALQGLNKSETAAKYGEDKVLIWRRSYDVPP 147 Query: 361 -----------------------RYPKGESYEDLVQRLEP-----VIMELERQENVLVIC 392 P E +D V R+ P + E+ + V+V Sbjct: 148 MSLDESDDRHPIKDPRYKHIPKRELPSTECLKDTVARVIPYWTDEIAKEVLEGKKVIVAA 207 Query: 393 HQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVE 435 H +R L+ YF + S +++ L P P+ Y + Sbjct: 208 HGNSLRALVKYFDNLSEEDVLKLNIPTGI-----PLVYELDKD 245 >5Y64-B nrPDB Length = 262 Score = 185 bits (470), Expect = 3e-47, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 78/234 (33%), Gaps = 46/234 (19%) Query: 249 VTPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHM 306 + + L RHGES N+ R G D+ LS G + A ++ G +TS Sbjct: 1 MAAYKLVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQ 60 Query: 307 KRTIQTA-------EALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYR 359 KR I+T + + +P + LNE G + E + E + Y Sbjct: 61 KRAIRTLWTVLDAIDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEAQVKIWRRSYD 120 Query: 360 Y---------------------------RYPKGESYEDLVQRLEP-----VIMELERQEN 387 + P ES +D + R P ++ +++ + Sbjct: 121 VPPPPMEPDHPFYSNISKDRRYADLTEDQLPSCESLKDTIARALPFWNEEIVPQIKEGKR 180 Query: 388 VLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNV 441 VL+ H +R ++ + S + + L P P+ Y + Sbjct: 181 VLIAAHGNSLRGIVKHLEGLSEEAIMELNLPTGI-----PIVYELDKNLKPIKP 229 >3D8H-A nrPDB Length = 267 Score = 182 bits (462), Expect = 3e-46, Method: Composition-based stats. Identities = 48/215 (22%), Positives = 77/215 (35%), Gaps = 39/215 (18%) Query: 250 TPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMK 307 + + L RHGESE N R G D LS +G A + +G V+TS +K Sbjct: 19 STYKLTLIRHGESEWNKENRFTGWTDVSLSEQGVSEAIEAGRMLLEKGFKFDVVYTSVLK 78 Query: 308 RTIQTA-------EALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQ----- 355 R I T + P LNE G + + E + E+ + Sbjct: 79 RAIMTTWTVLKELGNINCPIINHWRLNERHYGALQGLNKSETASKFGEDQVKIWRRSFDV 138 Query: 356 -----DKYRYRYPK---------------GESYEDLVQRLEP-----VIMELERQENVLV 390 +K R+P E +D V+R++P + + ++VLV Sbjct: 139 PPPVLEKSDPRWPGNELIYKGICPSCLPTTECLKDTVERVKPYFEDVIAPSIMSGKSVLV 198 Query: 391 ICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKL 425 H +R LL + +++ + P L L Sbjct: 199 SAHGNSLRALLYLLEGMTPEQILEVNIPTACPLVL 233 >4IJ6-A nrPDB Length = 211 Score = 181 bits (460), Expect = 4e-46, Method: Composition-based stats. Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 11/173 (6%) Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKR--- 308 + L R ESE N GR G D LS RGK+ A LA + + + +++S +KR Sbjct: 4 LILVRAAESEWNPVGRYQGLLDPDLSERGKKQAKLLAQELSREHL--DVIYSSPLKRTYL 61 Query: 309 -TIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGES 367 ++ AEA + + + EID G+ M EE+ E YPE+F ++ ++ + GES Sbjct: 62 TALEIAEAKNLEVIKEDRIIEIDHGMWSGMLVEEVMEKYPEDFRRWVEEPHKVEFQGGES 121 Query: 368 YEDLVQRLEPVIMELERQ---ENVLVICHQAVMRCLLAYFLDKSSDELPYLKC 417 + R++ + E+ ++ + V+V+ H MR + L + C Sbjct: 122 LASVYNRVKGFLEEVRKRHWNQTVVVVSHTVPMRAMYCALLGVDLSKFWSFGC 174 >5UM0-A nrPDB Length = 235 Score = 180 bits (456), Expect = 2e-45, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 76/209 (36%), Gaps = 39/209 (18%) Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311 + RHG+SE N + G D LS +G A A ++ G +TS + R I+ Sbjct: 11 LVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKENGYEFDIAFTSVLTRAIK 70 Query: 312 TA-------EALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRY---- 360 T + L VP + LNE G + + ++ E Y +E + Y Sbjct: 71 TCNIVLEESDQLFVPQIKTWRLNERHYGRLQGLDKKQTAEKYGDEQVRIWRRSYDTLPPL 130 Query: 361 ---------------------RYPKGESYEDLVQRLEP-----VIMELERQENVLVICHQ 394 P GE+ + ++R+ P + + + VLV H Sbjct: 131 LDKDDAFSAHKDRRYAHLPADVVPDGENLKVTLERVLPFWEDQIAPAILSGKRVLVAAHG 190 Query: 395 AVMRCLLAYFLDKSSDELPYLKCPLHTVL 423 +R L + S +++ L+ P L Sbjct: 191 NSLRALAKHIEGISDEDIMGLEIPTGQPL 219 >6NRU-A nrPDB Length = 206 Score = 178 bits (451), Expect = 5e-45, Method: Composition-based stats. Identities = 42/177 (23%), Positives = 82/177 (46%), Gaps = 13/177 (7%) Query: 254 IYLCRHGESELNIRGRIGGDSG--LSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311 ++L RHGE++ N+ G G + L+ RG + A L + +S V S ++R Sbjct: 6 LWLIRHGETQANVDGLYSGHAPTPLTARGIEQAQNLHTLLDD--VSFDLVLCSELERAQH 63 Query: 312 TAEAL----GVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYP-KGE 366 TA + +P LNE+ G E + ++ + E ++ D +++ P GE Sbjct: 64 TARLVLSDRQLPVHIIPELNEMFFGDWEMRHHRDLMQEDAENYSAWCND-WQHAIPTNGE 122 Query: 367 SYEDLVQRLEPVIMEL---ERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLH 420 ++ QR+E I L + +N+L++ HQ V+ L+A + ++ + + + Sbjct: 123 GFQAFSQRVERFIARLSEYQHYQNILIVSHQGVLSLLIARLIGMPAESMWHFRVDQG 179 >3NFY-A nrPDB Length = 267 Score = 160 bits (405), Expect = 1e-39, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 81/220 (36%), Gaps = 43/220 (19%) Query: 249 VTPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHM 306 ++ + + RHGE N R D L+ G + A +++ V+TS + Sbjct: 1 MSKYKLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVL 60 Query: 307 KRTIQTAEAL-------GVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYR 359 R+I TA + VP E LNE G + E++ ++ EE + Y Sbjct: 61 NRSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYN 120 Query: 360 Y-----------------------------RYPKGESYEDLVQRLEP-----VIMELERQ 385 + P+ ES +D+++RL P + E+ R Sbjct: 121 VTPPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRG 180 Query: 386 ENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKL 425 + +L+ H R LL + S +++ + P + L Sbjct: 181 KTILISAHGNSSRALLKHLEGISDEDIINITLPTGVPILL 220 >4PZA-A nrPDB Length = 223 Score = 91.3 bits (225), Expect = 8e-19, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 20/164 (12%) Query: 249 VTPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHM 306 + R + + RHG+++ N+ R+ G D+ LS G+ A A A + + L + +S + Sbjct: 1 MRARRLVMLRHGQTDYNVGSRMQGQLDTELSELGRTQAVAAAEVLGKR--QPLLIVSSDL 58 Query: 307 KRTIQTA----EALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRY 362 +R TA E G+ L E G + +T+ +I P L ++ + Sbjct: 59 RRAYDTAVKLGERTGLVVRVDTRLRETHLGDWQGLTHAQIDADAPGA-RLAWREDATWAP 117 Query: 363 PKGESYEDLVQRLEPVIMELERQE-----------NVLVICHQA 395 GES D+ R P++ EL E V+++ H Sbjct: 118 HGGESRVDVAARSRPLVAELVASEPEWGGADEPDRPVVLVAHGG 161 >3E9D-A nrPDB Length = 265 Score = 83.9 bits (206), Expect = 1e-16, Method: Composition-based stats. Identities = 52/247 (21%), Positives = 89/247 (36%), Gaps = 59/247 (23%) Query: 249 VTPRSIYLCRHGESELNIRGRIGG---DSGLSVRGKQYAYALANFIQSQGISSLKVWTSH 305 + ++ + RHGE++ N + G D+ LS G Q A A +++ + V+ S+ Sbjct: 1 MLTFALTIVRHGETQYNRDKLLQGQGIDTPLSDTGHQQAAAAGRYLKD--LHFTNVFVSN 58 Query: 306 MKRTIQTAEAL--------GVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDK 357 ++R IQTAE + L E GV E E ++ Q Sbjct: 59 LQRAIQTAEIILGNNLHSSATEMILDPLLRERGFGVAEGRPKEHLKNM----ANAAGQSC 114 Query: 358 YRYRYPKGESYEDLVQRLEPVIMELERQ-----------------------------ENV 388 Y P GE+ E + R + + L ++ +NV Sbjct: 115 RDYTPPGGETLEQVKTRFKMFLKSLFQRMFEEHGSALSSVPSEADQPVIAGLADDGAQNV 174 Query: 389 ----LVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAV 444 L++ H A +R + + ++ L+C L LK+ V C I + Sbjct: 175 PVHALMVSHGAFIRISVRHLVE-------DLQCCLPAGLKMNQVFSPCPNTGI--SRFIF 225 Query: 445 NTHREKP 451 HRE+ Sbjct: 226 TIHREES 232 >3HJG-A nrPDB Length = 213 Score = 77.8 bits (190), Expect = 1e-14, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 71/168 (42%), Gaps = 10/168 (5%) Query: 247 IHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTSHM 306 + + +IYL RHG+ + + G + L V+ + +A +++G + +S + Sbjct: 1 MSLKTLNIYLMRHGKVDAAPG--LHGQTDLKVK-EAEQQQIAMAWKTKGYDVAGIISSPL 57 Query: 307 KR----TIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRY 362 R AE +P L E+D G + M + ++ + ++ Q + Sbjct: 58 SRCHDLAQILAEQQLLPMTTEDDLQEMDFGDFDGMPF-DLLTEHWKKLDAFWQSPAHHSL 116 Query: 363 PKGESYEDLVQRLEPVIMELER--QENVLVICHQAVMRCLLAYFLDKS 408 P ES QR+ ++ +N+L++ H V+R +LA+ L Sbjct: 117 PNAESLSTFSQRVSRAWSQIINDINDNLLIVTHGGVIRIILAHVLGVD 164 >3LG2-A nrPDB Length = 292 Score = 73.1 bits (178), Expect = 2e-13, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 69/188 (36%), Gaps = 32/188 (17%) Query: 241 VYYLMNIHVTPRSIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALAN--FIQSQGI 296 +Y+ +TPR I RHG++E + G+ G D L+ G+ F +Q + Sbjct: 17 LYFQGMPSLTPRCII-VRHGQTEWSKSGQYTGLTDLPLTPYGEGQMLRTGESVFRNNQFL 75 Query: 297 SSL---KVWTSHMKRTIQTAEALGVPYEQWKA----------LNEIDAGVCEEMTYEEIQ 343 + ++TS R QT + + P + L E + G E M EI Sbjct: 76 NPDNITYIFTSPRLRARQTVDLVLKPLSDEQRAKIRVVVDDDLREWEYGDYEGMLTREII 135 Query: 344 E---HYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELE----------RQENVLV 390 E + +R GE+ + + RL I ++ R +++V Sbjct: 136 ELRKSRGLDKERPWN-IWRDGCENGETTQQIGLRLSRAIARIQNLHRKHQSEGRASDIMV 194 Query: 391 ICHQAVMR 398 H +R Sbjct: 195 FAHGHALR 202 >3R7A-A nrPDB Length = 237 Score = 64.3 bits (155), Expect = 1e-10, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 86/221 (38%), Gaps = 42/221 (19%) Query: 253 SIYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTI 310 ++Y+ RHG++ LN R G DS L +G + A L ++ I + ++S R I Sbjct: 15 TLYVTRHGKTILNTNHRAQGWADSPLVEKGVEVATNLGTGLKD--IHFMNAYSSDSGRAI 72 Query: 311 QTAEAL-------GVPYEQWKALNEIDAGVCEEMTYEEIQE--------HYPEEFA---- 351 +TA + + EQ K L E++ G+ E + + + PEE Sbjct: 73 ETANLVLKYSEQSKLKLEQRKKLRELNFGIFEGEKLDNMWDAVGKAAGVTSPEELLKFSI 132 Query: 352 LRDQDKYRYRYPK--GESYEDLVQRLEPVIMELER------QENVLVICHQAVMRCLLAY 403 D R P E +E R++ I ++ NVLV+ H L+ Sbjct: 133 QEVIDLIRAADPTKQAEDWELFSTRIKAEIDKISEEAAKDGGGNVLVVVHG----LLITT 188 Query: 404 FLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAV 444 ++ L +V K + Y + IY VE+V Sbjct: 189 LIEMLDSSKTKLGVENASVTK---IVY---QDGIY-TVESV 222 >3DCY-A nrPDB Length = 275 Score = 63.9 bits (154), Expect = 1e-10, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 50/136 (36%), Gaps = 17/136 (12%) Query: 250 TPRSIYLCRHGESELNIRGRIGG---DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHM 306 ++ + RHGE+ N I G D LS G + A A F+ + ++S + Sbjct: 7 ARFALTVVRHGETRFNKEKIIQGQGVDEPLSETGFKQAAAAGIFLN--NVKFTHAFSSDL 64 Query: 307 KRTIQTAEAL--------GVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKY 358 RT QT + + + L E GV E E++ ++ Sbjct: 65 MRTKQTMHGILERSKFCKDMTVKYDSRLRERKYGVVEGKALSELRAM----AKAAREECP 120 Query: 359 RYRYPKGESYEDLVQR 374 + P GE+ + + R Sbjct: 121 VFTPPGGETLDQVKMR 136 >2YN2-A nrPDB Length = 279 Score = 58.9 bits (141), Expect = 4e-09, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 75/188 (39%), Gaps = 23/188 (12%) Query: 249 VTPRSIYLCRHG-ESEL----NIRGRIGG---DSGLSVRGKQYAYALANFIQSQGISSLK 300 + +IY+ RHG S G D LS G + A+ LAN+I + Sbjct: 10 MAIENIYIARHGYRSNWLPKGPYPPPPTGIDNDVPLSEHGVEQAHELANYISKLDVKPEM 69 Query: 301 VWTSHMKRTIQTA----EALGVPYEQWKALNE---IDAGVCEEMTYEEIQEHYPEEFALR 353 +++S R ++T+ EAL +P + + E D + E E+ + Sbjct: 70 IFSSPFYRCLETSKPTVEALKIPLYVDRGVGEWYKPDRPIIPEPATHEVMSKFFPSMISP 129 Query: 354 DQDKYRYRYPKGESYEDLVQRLEP----VIMELERQ----ENVLVICHQAVMRCLLAYFL 405 D + KGE+ ED+ +R I +ER+ + ++++ H A L L Sbjct: 130 DWEPSIIPSNKGETEEDIFERCHKFWPVFIDRVERKFPNVKTIMIVTHAATKSALGMNLL 189 Query: 406 DKSSDELP 413 SS + P Sbjct: 190 KFSSAKEP 197 >3F2I-A nrPDB Length = 172 Score = 48.9 bits (115), Expect = 5e-06, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 29/63 (46%) Query: 254 IYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQTA 313 +YL RHG +E G + L+ GKQ +A + G + TS + R QTA Sbjct: 3 LYLIRHGIAEAQKTGIKDEERELTQEGKQKTEKVAYRLVKLGRQFDLIVTSPLIRARQTA 62 Query: 314 EAL 316 E L Sbjct: 63 EIL 65 >6BBQ-A nrPDB Length = 520 Score = 43.9 bits (102), Expect = 1e-04, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 69/171 (40%), Gaps = 19/171 (11%) Query: 21 SSGSSRLQRRRGSSIPQ-FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLG 79 ++ R+ ++G + + F N ++M+GL A GKT I KL + PT FN+ Sbjct: 337 ATRKRRIANKKGKVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNV- 395 Query: 80 QYRREAVSYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDAT-----N 134 E V+YKN +F + D +IR +Y + +G + V D + Sbjct: 396 ----ETVTYKNVKFNVWDVGGLDKIRPLW--------RHYYTGTQGLIFVVDCADRDRID 443 Query: 135 TTRERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCD 185 R+ I+ + + + + P + + Q KLG D + Sbjct: 444 EARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRN 494 >3LVQ-E nrPDB Length = 497 Score = 42.3 bits (98), Expect = 4e-04, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 65/169 (38%), Gaps = 20/169 (11%) Query: 24 SSRLQRRRGSS--IPQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQY 81 S L +S I +N ++M+GL A GKT I KL + PT FN+ Sbjct: 302 PSALNSTASNSPGIEGLSNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNV--- 358 Query: 82 RREAVSYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDAT-----NTT 136 E V+YKN +F + D +IR +Y + +G + V D + Sbjct: 359 --ETVTYKNVKFNVWDVGGQDKIRPLW--------RHYYTGTQGLIFVVDCADRDRIDEA 408 Query: 137 RERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCD 185 R+ I+ + + + + P + + Q KLG D + Sbjct: 409 RQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRN 457 >2A5F-A nrPDB Length = 175 Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats. Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 18/153 (11%) Query: 38 FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97 F N ++M+GL A GKT I KL + PT FN+ E V+YKN +F + D Sbjct: 9 FGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNV-----ETVTYKNVKFNVWD 63 Query: 98 NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDAT-----NTTRERRSLILQFAKEHGY 152 +IR +Y + +G + V D + R+ I+ + Sbjct: 64 VGGQDKIRPLW--------RHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDA 115 Query: 153 KVFFIESICNDPGIIAENIRQVKLGSPDYIDCD 185 + + + P + + Q KLG D + Sbjct: 116 IILIFANKQDLPDAMKPHEIQEKLGLTRIRDRN 148 >4YLG-A nrPDB Length = 173 Score = 36.2 bits (82), Expect = 0.028, Method: Composition-based stats. Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Query: 32 GSSIPQFTNSPTM-VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKN 90 GS + + M ++MVGL A GKT I KL PT FN+ E V YKN Sbjct: 2 GSWLSKLLGKKEMRILMVGLDAAGKTSILYKLKLGEIVTTIPTIGFNV-----ETVEYKN 56 Query: 91 YEFFLPDNMEALQIR 105 F + D +IR Sbjct: 57 ISFTVWDVGGQDKIR 71 >3DM5-A nrPDB Length = 443 Score = 35.4 bits (80), Expect = 0.056, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 16/110 (14%) Query: 42 PTMVIMVGLPARGKTYISTKLTRYLNWIG-----TPTKVFNLGQY---RREAVSYKNYEF 93 PT+++MVG+ GKT KL RY G + + G Y R+ Y F Sbjct: 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYHIEVF 159 Query: 94 FLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLI 143 P +A+++ K+ +Y + + + D +E ++LI Sbjct: 160 GNPQEKDAIKLAKEGV--------DYFKSKGVDIIIVDTAGRHKEDKALI 201 >6FAE-B nrPDB Length = 213 Score = 35.0 bits (79), Expect = 0.065, Method: Composition-based stats. Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 15/111 (13%) Query: 45 VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQI 104 ++MVGL A GKT I KL PT FN+ E V YKN F + D +I Sbjct: 52 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWDVGGQDKI 106 Query: 105 RKQCALAALKDVHNYLSHEEGHVAVFDATNTTR--ERRSLILQFAKEHGYK 153 R +Y + +G + V D+ + R E R +++ E + Sbjct: 107 RPLW--------RHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELR 149 >5UF8-A nrPDB Length = 181 Score = 35.0 bits (79), Expect = 0.065, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 15/118 (12%) Query: 38 FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97 F N ++MVGL A GKT I KL PT FN+ E V YKN F + D Sbjct: 13 FGNKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWD 67 Query: 98 NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTR--ERRSLILQFAKEHGYK 153 +IR Y + +G + V D+ + R E R + Q E + Sbjct: 68 VGGQDKIRPLW--------RYYFQNTQGIIFVVDSNDRDRIAEAREELQQMLNEDELR 117 >3O47-A nrPDB Length = 329 Score = 35.0 bits (79), Expect = 0.067, Method: Composition-based stats. Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 15/111 (13%) Query: 45 VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQI 104 ++MVGL A GKT I KL PT FN+ E V YKN F + D +I Sbjct: 168 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWDVGGQDKI 222 Query: 105 RKQCALAALKDVHNYLSHEEGHVAVFDATNTTR--ERRSLILQFAKEHGYK 153 R +Y + +G + V D+ + R E R +++ E + Sbjct: 223 RPLW--------RHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELR 265 >6DFF-C nrPDB Length = 193 Score = 34.6 bits (78), Expect = 0.082, Method: Composition-based stats. Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 15/111 (13%) Query: 45 VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQI 104 ++MVGL A GKT I KL PT FN+ E V YKN F + D +I Sbjct: 32 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWDVGGLDKI 86 Query: 105 RKQCALAALKDVHNYLSHEEGHVAVFDATNTTR--ERRSLILQFAKEHGYK 153 R +Y + +G + V D+ + R E R +++ E + Sbjct: 87 RPLW--------RHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELR 129 >1J2J-A nrPDB Length = 166 Score = 34.6 bits (78), Expect = 0.082, Method: Composition-based stats. Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 15/111 (13%) Query: 45 VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQI 104 ++MVGL A GKT I KL PT FN+ E V YKN F + D +I Sbjct: 5 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWDVGGLDKI 59 Query: 105 RKQCALAALKDVHNYLSHEEGHVAVFDATNTTR--ERRSLILQFAKEHGYK 153 R +Y + +G + V D+ + R E R +++ E + Sbjct: 60 RPLW--------RHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELR 102 >5NZV-F nrPDB Length = 181 Score = 34.6 bits (78), Expect = 0.084, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 15/118 (12%) Query: 38 FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97 F N ++MVGL GKT + KL PT FN+ E V YKN F + D Sbjct: 13 FGNKEMRILMVGLDGAGKTTVLYKLKLGEVITTIPTIGFNV-----ETVQYKNISFTVWD 67 Query: 98 NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTR--ERRSLILQFAKEHGYK 153 +IR +Y + EG + V D+ + +R E R ++ + E + Sbjct: 68 VGGQDRIRSLW--------RHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELR 117 >3AQ4-A nrPDB Length = 184 Score = 34.6 bits (78), Expect = 0.10, Method: Composition-based stats. Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 15/111 (13%) Query: 45 VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQI 104 ++MVGL A GKT I KL PT FN+ E V YKN F + D +I Sbjct: 23 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWDVGGQDKI 77 Query: 105 RKQCALAALKDVHNYLSHEEGHVAVFDATNTTR--ERRSLILQFAKEHGYK 153 R +Y + +G + V D+ + R E R + + E + Sbjct: 78 RPLW--------RHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELR 120 >2B6H-A nrPDB Length = 192 Score = 33.5 bits (75), Expect = 0.22, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 47/110 (42%), Gaps = 16/110 (14%) Query: 31 RGSSIPQFTNSPTM-VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYK 89 RGS + M ++MVGL A GKT I KL PT FN+ E V YK Sbjct: 17 RGSLFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYK 71 Query: 90 NYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRER 139 N F + D +IR +Y + +G + V D+ + RER Sbjct: 72 NICFTVWDVGGQDKIRPLW--------RHYFQNTQGLIFVVDSND--RER 111 >6E3B-A nrPDB Length = 169 Score = 33.1 bits (74), Expect = 0.30, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 9/88 (10%) Query: 347 PEEFALRDQDKYRYRYPKGESYEDLVQRL-----EPVIMELERQENVLVICHQAVMRCLL 401 PE F+ + YR +P+ E++ L +RL +I E QEN+ + + + Sbjct: 7 PENFSHVVGEIYRSSFPRQENFSFLHERLKLKSILVLIPEEYPQENLNFLK----LTGIK 62 Query: 402 AYFLDKSSDELPYLKCPLHTVLKLTPVA 429 Y + S ++ P++ P H + K + Sbjct: 63 LYQVGMSGNKEPFVNIPSHLLTKALEIV 90 >1Z6X-A nrPDB Length = 180 Score = 32.7 bits (73), Expect = 0.38, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 15/95 (15%) Query: 45 VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQI 104 ++MVGL A GKT I KL PT FN+ E V YKN F + D +I Sbjct: 20 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNICFTVWDVGGQDRI 74 Query: 105 RKQCALAALKDVHNYLSHEEGHVAVFDATNTTRER 139 R +Y + +G + V D+ + RER Sbjct: 75 RPLW--------KHYFQNTQGLIFVVDSND--RER 99 >3LRP-A nrPDB Length = 181 Score = 31.9 bits (71), Expect = 0.67, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 15/95 (15%) Query: 45 VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQI 104 ++MVGL A GKT I K+ PT FN+ E V ++N F + D +I Sbjct: 20 ILMVGLDAAGKTTILYKVKLGEVVTTIPTIGFNV-----ETVEFRNISFTVWDVGGQDKI 74 Query: 105 RKQCALAALKDVHNYLSHEEGHVAVFDATNTTRER 139 R +Y S+ +G + V D+ + RER Sbjct: 75 RPLW--------RHYYSNTDGLIFVVDSND--RER 99 >4XRP-A nrPDB Length = 312 Score = 31.5 bits (70), Expect = 0.69, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 20/118 (16%) Query: 42 PTMVIMVGLPARGKTYISTKLTRYL-NWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNME 100 P ++I+VG P GK+ + R NW+ F L Q+ +S F+ Sbjct: 11 PKLLILVGAPGSGKSTFARYFIRTEDNWVRVNRDDFRLMQFGDSLMS----PFY---EER 63 Query: 101 ALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTT-RERRSLILQFAKEHG--YKVF 155 ++ + +A LK+ N + DATN++ R + ++ + + +KVF Sbjct: 64 ITKMVEASVIALLKNRTN---------VIIDATNSSLRSLQDMVHTYTEYADISFKVF 112 >4UZU-A nrPDB Length = 513 Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 9/79 (11%) Query: 62 LTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQIRKQCALAA--------L 113 +T NW N+ +R +AV + + FF PD + ++ + L + Sbjct: 210 VTELKNWGKWYVNTTNIDGFRLDAVKHIKFSFF-PDWLSYVRSQTGKPLFTVGEYWSYDI 268 Query: 114 KDVHNYLSHEEGHVAVFDA 132 +HNY++ +G +++FDA Sbjct: 269 NKLHNYITKTDGTMSLFDA 287 >4C0E-A nrPDB Length = 528 Score = 31.2 bits (69), Expect = 1.2, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 20 HSSGSSRLQRRRGSSIPQFTNSPTMVIMVGLP-ARGKTYISTKLTRYLNWIGTPTKVFNL 78 + L + ++ + +++GLP +G + L ++L +G K F + Sbjct: 181 FDMRPNLLPGFACAWAGLVSHRAFLPVILGLPDEKGWAPFTKLLEQFLGCVGELVKTFTV 240 Query: 79 GQYRREA 85 +E Sbjct: 241 SSLGKEM 247 >1DJ3-A nrPDB Length = 442 Score = 30.8 bits (68), Expect = 1.2, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 28/136 (20%) Query: 273 DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKR-TIQTAEALGVPY--EQWKALNEI 329 D +V G + A +FI + ++S + R ++ + + ++ L E Sbjct: 126 DLHQTVDGLREAELANSFIGTTKRGIGPCYSSKVTRNGLRVCDLRHMDTFGDKLDVLFED 185 Query: 330 DAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIME-------- 381 A E Y + EE E Y+ +RLEP I + Sbjct: 186 AAARFEGFKYSKGMLK--EEV---------------ERYKKFAERLEPFIADTVHVLNES 228 Query: 382 LERQENVLVICHQAVM 397 + +++ +LV QA M Sbjct: 229 IRQKKKILVEGGQATM 244 >2YVU-A nrPDB Length = 186 Score = 30.8 bits (68), Expect = 1.2, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 11/108 (10%) Query: 44 MVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQ 103 +V + GLP GKT I+T+L L G +V + G + R VS + F E L+ Sbjct: 15 VVWLTGLPGSGKTTIATRLADLLQKEGYRVEVLD-GDWARTTVS-EGAGFTR---EERLR 69 Query: 104 IRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHG 151 K+ A A L G + + + ++ R+++ + +E G Sbjct: 70 HLKRIAWIA------RLLARNGVIVICSFVSPYKQARNMVRRIVEEEG 111 >2IYT-A nrPDB Length = 184 Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 6/83 (7%) Query: 46 IMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEAL-QI 104 ++VGLP GK+ I +L + L G ++ +R S + F D + +I Sbjct: 6 VLVGLPGSGKSTIGRRLAKAL---GVGLLDTDVAIEQRTGRSIA--DIFATDGEQEFRRI 60 Query: 105 RKQCALAALKDVHNYLSHEEGHV 127 + AAL D LS G V Sbjct: 61 EEDVVRAALADHDGVLSLGGGAV 83 >1LFP-A nrPDB Length = 249 Score = 30.4 bits (67), Expect = 1.8, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 2/85 (2%) Query: 259 HGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGIS-SLKVWTSHMKRTIQTAEALG 317 G S + RGK ++ + I + + + ++ I+ A+ Sbjct: 2 AGHSHWAQIKHKKAKVD-AQRGKLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKKAN 60 Query: 318 VPYEQWKALNEIDAGVCEEMTYEEI 342 +P+E + + AG E +EE+ Sbjct: 61 MPWENIERAIKKGAGELEGEQFEEV 85 >5L3R-A nrPDB Length = 301 Score = 30.0 bits (66), Expect = 2.0, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 22/45 (48%) Query: 42 PTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAV 86 PT++++ GL GKT + KL YL G + YR A+ Sbjct: 106 PTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAI 150 >2SHK-A nrPDB Length = 173 Score = 28.9 bits (63), Expect = 5.0, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Query: 45 VIMVGLPARGKTYISTKLTRYLNWIGTPTKVF---NLGQYRREAVSYKNYEFFLPDNMEA 101 + MVG GKT + +L R L + T +F G + V+ + + F EA Sbjct: 5 IFMVGARGCGKTTVGRELARALGYEFVDTDIFMQHTSGMTVADVVAAEGWPGFRRRESEA 64 Query: 102 LQ 103 LQ Sbjct: 65 LQ 66 >2V3C-C nrPDB Length = 432 Score = 28.5 bits (62), Expect = 6.6, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 21/42 (50%) Query: 44 MVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREA 85 ++++VG+ GKT + KL RY+ G + YR A Sbjct: 101 VILLVGIQGSGKTTTAAKLARYIQKRGLKPALIAADTYRPAA 142 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.136 0.375 Lambda K H 0.267 0.0414 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,551,170 Number of Sequences: 36641 Number of extensions: 757514 Number of successful extensions: 2430 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 53 Number of HSP's successfully gapped in prelim test: 68 Number of HSP's that attempted gapping in prelim test: 2251 Number of HSP's gapped (non-prelim): 128 length of query: 471 length of database: 10,336,785 effective HSP length: 101 effective length of query: 370 effective length of database: 6,636,044 effective search space: 2455336280 effective search space used: 2455336280 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 61 (28.1 bits)