BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P15303
         (768 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

2QTV-A nrPDB                                                         1597   0.0  
2NUP-A nrPDB                                                          768   0.0  
3EH1-A nrPDB                                                           82   6e-16
2NUP-B nrPDB                                                           73   4e-13
5KYW-B nrPDB                                                           58   2e-08
3EH2-A nrPDB                                                           52   1e-06
1M2V-B nrPDB                                                           49   1e-05
1PD0-A nrPDB                                                           49   1e-05
3TU9-A nrPDB                                                           33   0.67 
2HI4-A nrPDB                                                           30   2.7  

>2QTV-A nrPDB
          Length = 772

 Score = 1597 bits (4135), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 767/767 (100%), Positives = 767/767 (100%)

Query: 2   DFETNEDINGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDELNVAPYNPVVCSGPHC 61
           DFETNEDINGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDELNVAPYNPVVCSGPHC
Sbjct: 6   DFETNEDINGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDELNVAPYNPVVCSGPHC 65

Query: 62  KSILNPYCVIDPRNSSWSCPICNSRNHLPPQYTNLSQENMPLELQSTTIEYITNKPVTVP 121
           KSILNPYCVIDPRNSSWSCPICNSRNHLPPQYTNLSQENMPLELQSTTIEYITNKPVTVP
Sbjct: 66  KSILNPYCVIDPRNSSWSCPICNSRNHLPPQYTNLSQENMPLELQSTTIEYITNKPVTVP 125

Query: 122 PIFFFVVDLTSETENLDSLKESIITSLSLLPPNALIGLITYGNVVQLHDLSSETIDRCNV 181
           PIFFFVVDLTSETENLDSLKESIITSLSLLPPNALIGLITYGNVVQLHDLSSETIDRCNV
Sbjct: 126 PIFFFVVDLTSETENLDSLKESIITSLSLLPPNALIGLITYGNVVQLHDLSSETIDRCNV 185

Query: 182 FRGDREYQLEALTEMLTGQKPTGPGGAASHLPNAMNKVTPFSLNRFFLPLEQVEFKLNQL 241
           FRGDREYQLEALTEMLTGQKPTGPGGAASHLPNAMNKVTPFSLNRFFLPLEQVEFKLNQL
Sbjct: 186 FRGDREYQLEALTEMLTGQKPTGPGGAASHLPNAMNKVTPFSLNRFFLPLEQVEFKLNQL 245

Query: 242 LENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYKNIPARIILFASGPGTVAPGLIVN 301
           LENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYKNIPARIILFASGPGTVAPGLIVN
Sbjct: 246 LENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYKNIPARIILFASGPGTVAPGLIVN 305

Query: 302 SELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDIFAGCYDQIGMSEMKQL 361
           SELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDIFAGCYDQIGMSEMKQL
Sbjct: 306 SELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDIFAGCYDQIGMSEMKQL 365

Query: 362 TDSTGGVLLLTDAFSTAIFKQSYLRLFAKDEEGYLKMAFNGNMAVKTSKDLKVQGLIGHA 421
           TDSTGGVLLLTDAFSTAIFKQSYLRLFAKDEEGYLKMAFNGNMAVKTSKDLKVQGLIGHA
Sbjct: 366 TDSTGGVLLLTDAFSTAIFKQSYLRLFAKDEEGYLKMAFNGNMAVKTSKDLKVQGLIGHA 425

Query: 422 SAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIANTAANSNPMMSAPGSADR 481
           SAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIANTAANSNPMMSAPGSADR
Sbjct: 426 SAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIANTAANSNPMMSAPGSADR 485

Query: 482 PHLAYTQFITTYQHSSGTNRIRVTTVANQLLPFGTPAIAASFDQEAAAVLMARIAVHKAE 541
           PHLAYTQFITTYQHSSGTNRIRVTTVANQLLPFGTPAIAASFDQEAAAVLMARIAVHKAE
Sbjct: 486 PHLAYTQFITTYQHSSGTNRIRVTTVANQLLPFGTPAIAASFDQEAAAVLMARIAVHKAE 545

Query: 542 TDDGADVIRWLDRTLIKLCQKYADYNKDDPQSFRLAPNFSLYPQFTYYLRRSQFLSVFNN 601
           TDDGADVIRWLDRTLIKLCQKYADYNKDDPQSFRLAPNFSLYPQFTYYLRRSQFLSVFNN
Sbjct: 546 TDDGADVIRWLDRTLIKLCQKYADYNKDDPQSFRLAPNFSLYPQFTYYLRRSQFLSVFNN 605

Query: 602 SPDETAFYRHIFTREDTTNSLIMIQPTLTSFSMEDDPQPVLLDSISVKPNTILLLDTFFF 661
           SPDETAFYRHIFTREDTTNSLIMIQPTLTSFSMEDDPQPVLLDSISVKPNTILLLDTFFF
Sbjct: 606 SPDETAFYRHIFTREDTTNSLIMIQPTLTSFSMEDDPQPVLLDSISVKPNTILLLDTFFF 665

Query: 662 ILIYHGEQIAQWRKAGYQDDPQYADFKALLEEPKLEAAELLVDRFPLPRFIDTEAGGSQA 721
           ILIYHGEQIAQWRKAGYQDDPQYADFKALLEEPKLEAAELLVDRFPLPRFIDTEAGGSQA
Sbjct: 666 ILIYHGEQIAQWRKAGYQDDPQYADFKALLEEPKLEAAELLVDRFPLPRFIDTEAGGSQA 725

Query: 722 RFLLSKLNPSDNYQDMARGGSTIVLTDDVSLQNFMTHLQQVAVSGQA 768
           RFLLSKLNPSDNYQDMARGGSTIVLTDDVSLQNFMTHLQQVAVSGQA
Sbjct: 726 RFLLSKLNPSDNYQDMARGGSTIVLTDDVSLQNFMTHLQQVAVSGQA 772


>2NUP-A nrPDB
          Length = 769

 Score =  768 bits (1982), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/773 (49%), Positives = 515/773 (66%), Gaps = 22/773 (2%)

Query: 3   FETNEDINGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDELNVAPYNPVVCSGPHCK 62
            + NE+ +GVRF+WNV+PS+R +A   VVPV  L+TPLKE  +L    Y PV+CS   C+
Sbjct: 12  IQQNEERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVLCSRTTCR 71

Query: 63  SILNPYCVIDPRNSSWSCPICNSRNHLPPQYTNLSQENMPLEL--QSTTIEYITNKPVTV 120
           ++LNP C +D R   W+C  C  RN  PP Y  +S+ N P EL  Q ++IEY+  +   +
Sbjct: 72  AVLNPLCQVDYRAKLWACNFCYQRNQFPPSYAGISELNQPAELLPQFSSIEYVVLRGPQM 131

Query: 121 PPIFFFVVDLTSETENLDSLKESIITSLSLLPPNALIGLITYGNVVQLHDLSSETIDRCN 180
           P IF +VVD   E E+L +LKES+  SLSLLPP AL+GLIT+G +VQ+H+L  E I +  
Sbjct: 132 PLIFLYVVDTCMEDEDLQALKESMQMSLSLLPPTALVGLITFGRMVQVHELGCEGISKSY 191

Query: 181 VFRGDREYQLEALTEMLTGQKPTGPGGAASHLPNAMNKVTPFSLNRFFLPLEQVEFKLNQ 240
           VFRG ++   + L EML   K   P   A+  P       P   NRF  P+++++  L  
Sbjct: 192 VFRGTKDLSAKQLQEMLGLSKV--PVTQATRGPQVQQ---PPPSNRFLQPVQKIDMNLTD 246

Query: 241 LLENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYKNIPARIILFASGPGTVAPGLIV 300
           LL  L  D W VP G RPLR++G AL+IA  LL+  + N  ARI++F  GP T  PG++V
Sbjct: 247 LLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPATQGPGMVV 306

Query: 301 NSELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDIFAGCYDQIGMSEMKQ 360
             ELK P+RS HDID D+A++ KK  K +  +A R A  GH +DI+A   DQ G+ EMK 
Sbjct: 307 GDELKTPIRSWHDIDKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQTGLLEMKC 366

Query: 361 LTDSTGGVLLLTDAFSTAIFKQSYLRLFAKDEEGYLKMAFNGNMAVKTSKDLKVQGLIGH 420
             + TGG +++ D+F+T++FKQ++ R+F KD  G  KM F G + +KTS+++K+ G IG 
Sbjct: 367 CPNLTGGYMVMGDSFNTSLFKQTFQRVFTKDMHGQFKMGFGGTLEIKTSREIKISGAIGP 426

Query: 421 ASAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIANTAANSNPMMSAPGSAD 480
             ++  +    +SE+EIG G T  WK+  LSP  + AI+FE+ N   ++ P+      A 
Sbjct: 427 CVSLN-SKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQ--HNAPIPQGGRGA- 482

Query: 481 RPHLAYTQFITTYQHSSGTNRIRVTTVANQLLPFGTPA--IAASFDQEAAAVLMARIAVH 538
                  QF+T YQHSSG  RIRVTT+A       T    IAASFDQEAAA+LMAR+A++
Sbjct: 483 ------IQFVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAILMARLAIY 536

Query: 539 KAETDDGADVIRWLDRTLIKLCQKYADYNKDDPQSFRLAPNFSLYPQFTYYLRRSQFLSV 598
           +AET++G DV+RWLDR LI+LCQK+ +Y+KDDP SFR +  FSLYPQF ++LRRS FL V
Sbjct: 537 RAETEEGPDVLRWLDRQLIRLCQKFGEYHKDDPSSFRFSETFSLYPQFMFHLRRSSFLQV 596

Query: 599 FNNSPDETAFYRHIFTREDTTNSLIMIQPTLTSFSMEDDPQPVLLDSISVKPNTILLLDT 658
           FNNSPDE+++YRH F R+D T SLIMIQP L ++S    P+PVLLDS S+  + ILL+DT
Sbjct: 597 FNNSPDESSYYRHHFMRQDLTQSLIMIQPILYAYSFSGPPEPVLLDSSSILADRILLMDT 656

Query: 659 FFFILIYHGEQIAQWRKAGYQDDPQYADFKALLEEPKLEAAELLVDRFPLPRFIDTEAGG 718
           FF ILIYHGE IAQWRK+GYQD P+Y +F+ LL+ P  +A E+L  RFP+PR+IDTE GG
Sbjct: 657 FFQILIYHGETIAQWRKSGYQDMPEYENFRHLLQAPVDDAQEILHSRFPMPRYIDTEHGG 716

Query: 719 SQARFLLSKLNPSDNYQDMARGG---STIVLTDDVSLQNFMTHLQQVAVSGQA 768
           SQARFLLSK+NPS  + +M   G      +LTDDVSLQ FM HL+++AVS  A
Sbjct: 717 SQARFLLSKVNPSQTHNNMYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA 769


>3EH1-A nrPDB
          Length = 751

 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 134/646 (20%), Positives = 258/646 (39%), Gaps = 108/646 (16%)

Query: 10  NGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDELNVAPYNPVV-CSGPHCKSILNPY 68
           +  R T    P T++  N   +P+G L  P ++  +L V   N +V C    C++ +NP+
Sbjct: 41  DSFRCTLTNIPQTQALLNKAKLPLGLLLHPFRDLTQLPVITSNTIVRCRS--CRTYINPF 98

Query: 69  C-VIDPRNSSWSCPICNSRNHLPPQYT------NLSQENMPLELQSTTIEYITNKPVTV- 120
              ID R   W C +C   N +P ++       +  + +   E+Q++T+E+I +    + 
Sbjct: 99  VSFIDQRR--WKCNLCYRVNDVPEEFMYNPLTRSYGEPHKRPEVQNSTVEFIASSDYMLR 156

Query: 121 ---PPIFFFVVDLTS---ETENLDSLKESIITSLSLLPPNA--LIGLITYGNVVQLHDLS 172
              P ++ FV+D++    E   L  L +S++ +L  LP ++   IG +T+ + +  ++L 
Sbjct: 157 PPQPAVYLFVLDVSHNAVEAGYLTILCQSLLENLDKLPGDSRTRIGFMTFDSTIHFYNLQ 216

Query: 173 SETIDRCNVFRGDREYQLEALTEMLTGQKPTGPGGAASHLPNAMNKVTPFSLNRFFLPLE 232
                      G  + Q+  ++++     PT         P+++       L   +   E
Sbjct: 217 ----------EGLSQPQMLIVSDIDDVFLPT---------PDSL-------LVNLYESKE 250

Query: 233 QVEFKLNQLLENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYKNIP---ARIILFAS 289
            ++  LN L           P      R T SAL  A   LQ  +K +     R+ +F +
Sbjct: 251 LIKDLLNAL-----------PNMFTNTRETHSALGPA---LQAAFKLMSPTGGRVSVFQT 296

Query: 290 GPGTVAPGLIVNSELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDIFAGC 349
              ++  GL+ + E  DP   +    +   QH   A  FY ++A   +     VD+F   
Sbjct: 297 QLPSLGAGLLQSRE--DP---NQRSSTKVVQHLGPATDFYKKLALDCSGQQTAVDLFLLS 351

Query: 350 YDQIGMSEMKQLTDSTGGVLLLTDAFSTAIFKQSYLRLFAKDEEGYL--KMAFNGNMAVK 407
                ++ +  ++  + G +    +F       S      KD + YL  K+ F   M ++
Sbjct: 352 SQYSDLASLACMSKYSAGCIYYYPSFHYT-HNPSQAEKLQKDLKRYLTRKIGFEAVMRIR 410

Query: 408 TSKDLKVQGLIGHASAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIANTAA 467
            +K L +    G+                  + +T    +A+++P   +A+   I  +  
Sbjct: 411 CTKGLSMHTFHGN----------------FFVRSTDLLSLANINPDAGFAVQLSIEESLT 454

Query: 468 NSNPMMSAPGSADRPHLAYTQFITTYQHSSGTNRIRVTTVANQLLPFGTPA--IAASFDQ 525
           +++             L   Q    Y  S G  RIRV T+    LP  +    + A  D 
Sbjct: 455 DTS-------------LVCFQTALLYTSSKGERRIRVHTLC---LPVVSSLADVYAGVDV 498

Query: 526 EAAAVLMARIAVHKAETDDGADVIRWLDRTLIKLCQKYADYNKDDPQSFRLAP-NFSLYP 584
           +AA  L+A +AV ++ +   +D    L   ++     Y     +   S  +AP +  L+P
Sbjct: 499 QAAICLLANMAVDRSVSSSLSDARDALVNAVVDSLSAYGSTVSNLQHSALMAPSSLKLFP 558

Query: 585 QFTY-YLRRSQFLSVFNNSPDETAFYRHIFTREDTTNSLIMIQPTL 629
            +    L++  F +  +   D+  +       +   + + MI P L
Sbjct: 559 LYVLALLKQKAFRTGTSTRLDDRVYAMCQIKSQPLVHLMKMIHPNL 604


>2NUP-B nrPDB
          Length = 753

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 135/624 (21%), Positives = 237/624 (37%), Gaps = 113/624 (18%)

Query: 13  RFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDELNVAPYNPVV-CSGPHCKSILNPYC-V 70
           R T    P T++  N   +P+G L  P K+  +L V   + +V C    C++ +NP+   
Sbjct: 47  RCTLTSIPQTQALLNKAKLPLGLLLHPFKDLVQLPVVTSSTIVRCRS--CRTYINPFVSF 104

Query: 71  IDPRNSSWSCPICNSRNHLPPQ--YTNLSQ-----ENMPLELQSTTIEYITNKPVTV--- 120
           +D R   W C +C   N +P +  Y  L++        P E+Q+ TIE++      +   
Sbjct: 105 LDQRR--WKCNLCYRVNDVPEEFLYNPLTRVYGEPHRRP-EVQNATIEFMAPSEYMLRPP 161

Query: 121 -PPIFFFVVDLTS---ETENLDSLKESIITSLSLLPPNAL--IGLITYGNVVQLHDLSSE 174
            PP++ FV D++    ET  L+S+ +S++ +L LLP N    IG IT+ + +  + L   
Sbjct: 162 QPPVYLFVFDVSHNAVETGYLNSVCQSLLDNLDLLPGNTRTKIGFITFDSTIHFYGLQES 221

Query: 175 TIDRCNVFRGDREYQLEALTEMLTGQKPTGPGGAASHLPNAMNKVTPFSLNRFFLPL-EQ 233
                 +   D E                                        F+P+ E 
Sbjct: 222 LSQPQMLIVSDIE--------------------------------------DVFIPMPEN 243

Query: 234 VEFKLNQLLENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYKNIP---ARIILFASG 290
           +   LN+  E +     ++P        T SAL  A   LQ  +K +     R+ +F + 
Sbjct: 244 LLVNLNESKELVQDLLKTLPQMFTKTLETQSALGPA---LQAAFKLMSPTGGRMSVFQTQ 300

Query: 291 PGTVAPGLIVNSELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDIFAGCY 350
             T+  G +   E  +   S  DI      H   +  FY ++A   +     VD+F    
Sbjct: 301 LPTLGVGALKPREEPNHRSSAKDI------HMTPSTDFYKKLALDCSGQQVAVDLFLLSG 354

Query: 351 DQIGMSEMKQLTDSTGGVLLLTDAFSTAIFKQSYLRLFAKDEEGYL--KMAFNGNMAVKT 408
               ++ +  ++  + G +    ++         ++   K+ + YL  K+ F   M ++ 
Sbjct: 355 QYSDLASLGCISRYSAGSVYYYPSYHHQ-HNPVQVQKLQKELQRYLTRKIGFEAVMRIRC 413

Query: 409 SKDLKVQGLIGHASAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIANTAAN 468
           +K L +    G+                  + +T    + +++P   YA+          
Sbjct: 414 TKGLSIHTFHGN----------------FFVRSTDLLSLPNVNPDAGYAV---------- 447

Query: 469 SNPMMSAPGSADRPHLAYTQFITTYQHSSGTNRIRVTTVANQLLPFGTPA--IAASFDQE 526
               MS   S     L   Q    Y  S G  RIRV T+    LP  +    +    D +
Sbjct: 448 ---QMSVEESLTDTQLVSFQSALLYTSSKGERRIRVHTLC---LPVVSTLNDVFLGADVQ 501

Query: 527 AAAVLMARIAVHKAETDDGADVIRWLDRTLIKLCQKYADYNKDDPQSFRLAP-NFSLYPQ 585
           A + L+A +AV ++ T   +D    L   +I     Y      + Q   + P +  L+P 
Sbjct: 502 AISGLLANMAVDRSMTASLSDARDALVNAVIDSLSAYRSSVLSNQQPGLMVPFSLRLFPL 561

Query: 586 FTY-YLRRSQFLSVFNNSPDETAF 608
           F    L++  F +  N   DE  F
Sbjct: 562 FVLALLKQKSFQTGTNARLDERIF 585


>5KYW-B nrPDB
          Length = 770

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 93/452 (20%), Positives = 171/452 (37%), Gaps = 81/452 (17%)

Query: 12  VRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDE-------LNVAPYNPVVCSGPHCKSI 64
           +R T   FP T   A    +P+  +  P             +N     PV C+   CK+ 
Sbjct: 50  IRCTTYCFPCTSDMAKQAQIPLAAVIKPFATIPSNESPLYLVNHGESGPVRCN--RCKAY 107

Query: 65  LNPYCVIDPRNSSWSCPICNSRNHLPPQY--------TNLSQENMPLELQSTTIEYIT-- 114
           + P+         + C  CN  N +PP Y          L     P EL   + EY+   
Sbjct: 108 MCPFMQFIEGGRRYQCGFCNCVNDVPPFYFQHLDHIGRRLDHYEKP-ELSLGSYEYVATL 166

Query: 115 -----NKPVTVPPIFFFVVDLT-SETEN--LDSLKESIITSLSLLPPNA-------LIGL 159
                +KP   PP F F++D++ S  +N  +  + E + T L  +P           +G 
Sbjct: 167 DYCRKSKPPN-PPAFIFMIDVSYSNIKNGLVKLICEELKTMLEKIPKEEQEETSAIRVGF 225

Query: 160 ITYGNVVQLHDLSSETIDRCNVFRGDREYQLEALTEMLTGQKPTGPGGAASHLPNAMNKV 219
           ITY  V+   ++ S             + Q+  +T+                    + +V
Sbjct: 226 ITYNKVLHFFNVKSNL----------AQPQMMVVTD--------------------VGEV 255

Query: 220 TPFSLNRFFLPLEQVEFKLNQLLENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYKN 279
               L+ F +  ++ +  ++ LL+ + PD ++    +  + A      + +L    C   
Sbjct: 256 FVPLLDGFLVNYQESQSVIHNLLDQI-PDMFADSNENETVFAPVIQAGMEALKAADC--- 311

Query: 280 IPARIILFASG-PGTVAPGLIVNSELKDPLRSHHDIDSDHAQ-HYKKACKFYNQIAQRVA 337
            P ++ +F S  P   APG + N + K        +++D  +  ++     Y+ +A+   
Sbjct: 312 -PGKLFIFHSSLPTAEAPGKLKNRDDKKL------VNTDKEKILFQPQTNVYDSLAKDCV 364

Query: 338 ANGHTVDIFAGCYDQIGMSEMKQLTDSTGGVLLLTDAFSTAIFKQSYLRLFAKDEEGYLK 397
           A+G +V +F      + ++ +  +   TGG L   + F   + +Q +L     D E   K
Sbjct: 365 AHGCSVTLFLFPSQYVDVASLGLVPQLTGGTLYKYNNFQMHLDRQQFLNDLRNDIEK--K 422

Query: 398 MAFNGNMAVKTSKDLKVQGLIGHASAVKKTDA 429
           + F+  M V+TS   +     G       TD 
Sbjct: 423 IGFDAIMRVRTSTGFRATDFFGGILMNNTTDV 454


>3EH2-A nrPDB
          Length = 766

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 90/462 (19%), Positives = 165/462 (35%), Gaps = 101/462 (21%)

Query: 12  VRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDELNVAPY-------NPVVCSGPHCKSI 64
           +R T    P T   A    VP+  +  PL        +PY        P+ C+   CK+ 
Sbjct: 46  IRCTSYNIPCTSDMAKQAQVPLAAVIKPLARLPPEEASPYVVDHGESGPLRCN--RCKAY 103

Query: 65  LNPYCVIDPRNSSWSCPICNSRNHLPPQY--------TNLSQENMP-LELQS----TTIE 111
           + P+         + C  C+  N +PPQY          +   + P L L S     T++
Sbjct: 104 MCPFMQFIEGGRRFQCCFCSCINDVPPQYFQHLDHTGKRVDAYDRPELSLGSYEFLATVD 163

Query: 112 YITNKPVTVPPIFFFVVDLTS---ETENLDSLKESIITSLSLLPPNA-------LIGLIT 161
           Y  N     PP F F++D++     T  +  L E + + L  LP           +G +T
Sbjct: 164 YCKNNKFPSPPAFIFMIDVSYNAIRTGLVRLLCEELKSLLDFLPREGGAEESAIRVGFVT 223

Query: 162 YGNVVQLHDLSSETIDRCNVFRGDREYQLEALTEMLTGQKPTGPGGAASHLPNAMNKVTP 221
           Y  V+  +++ S                  A  +M+              + +  +   P
Sbjct: 224 YNKVLHFYNVKSSL----------------AQPQMMV-------------VSDVADMFVP 254

Query: 222 FSLNRFFLPLEQVEFKLNQLLENLSPDQWS------------VPAGHRPLRATGSALNIA 269
             L+ F + + +    +  LL+ + P+ ++            + AG   L+A   A    
Sbjct: 255 L-LDGFLVNVNESRAVITSLLDQI-PEMFADTRETETVFVPVIQAGMEALKAAECA---- 308

Query: 270 SLLLQGCYKNIPARIILF-ASGPGTVAPGLIVNSELKDPLRSHHDIDSDHAQH-YKKACK 327
                        ++ LF  S P   APG + N +          I++D  +  ++    
Sbjct: 309 ------------GKLFLFHTSLPIAEAPGKLKNRD------DRKLINTDKEKTLFQPQTG 350

Query: 328 FYNQIAQRVAANGHTVDIFAGCYDQIGMSEMKQLTDSTGGVLLLTDAFSTAIFKQSYLRL 387
            Y  +A+   A G  VD+F      + ++ +  +   TGG +    +F     ++ +L  
Sbjct: 351 AYQTLAKECVAQGCCVDLFLFPNQYVDVATLSVVPQLTGGSVYKYASFQVENDQERFLSD 410

Query: 388 FAKDEEGYLKMAFNGNMAVKTSKDLKVQGLIGHASAVKKTDA 429
             +D +    + F+  M V+TS  ++     G       TD 
Sbjct: 411 LRRDVQKV--VGFDAVMRVRTSTGIRAVDFFGAFYMSNTTDV 450


>1M2V-B nrPDB
          Length = 926

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 14/157 (8%)

Query: 5   TNEDINGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKE-YDELNVAPYNP--VVCSGPHC 61
           +N   + +R T N  P   S    + +P G +  P +  YD+++  P N   ++     C
Sbjct: 175 SNASPDYIRSTLNAVPKNSSLLKKSKLPFGLVIRPYQHLYDDIDPPPLNEDGLIVRCRRC 234

Query: 62  KSILNPYCVIDPRNSSWSCPICNSRNHLPPQYTNLSQENMPL------ELQSTTIEYITN 115
           +S +NP+     +   W C  C   N +P Q  + S  N P       E++   +EY+  
Sbjct: 235 RSYMNPFVTFIEQGRRWRCNFCRLANDVPMQ-MDQSDPNDPKSRYDRNEIKCAVMEYMAP 293

Query: 116 KPVTV----PPIFFFVVDLTSETENLDSLKESIITSL 148
           K  T+    P  + F++D++  +     L  +I T L
Sbjct: 294 KEYTLRQPPPATYCFLIDVSQSSIKSGLLATTINTLL 330


>1PD0-A nrPDB
          Length = 810

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 14/136 (10%)

Query: 12  VRFTWNVFPSTRSDANSNVVPVGCLYTPLKE-YDELNVAPYNP--VVCSGPHCKSILNPY 68
           +R T N  P   S    + +P G +  P +  YD+++  P N   ++     C+S +NP+
Sbjct: 66  IRSTLNAVPKNSSLLKKSKLPFGLVIRPYQHLYDDIDPPPLNEDGLIVRCRRCRSYMNPF 125

Query: 69  CVIDPRNSSWSCPICNSRNHLPPQYTNLSQENMPL------ELQSTTIEYITNKPVTV-- 120
                +   W C  C   N +P Q  + S  N P       E++   +EY+  K  T+  
Sbjct: 126 VTFIEQGRRWRCNFCRLANDVPMQ-MDQSDPNDPKSRYDRNEIKCAVMEYMAPKEYTLRQ 184

Query: 121 --PPIFFFVVDLTSET 134
             P  + F++D++  +
Sbjct: 185 PPPATYCFLIDVSQSS 200


>3TU9-A nrPDB
          Length = 363

 Score = 32.7 bits (73), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 6/96 (6%)

Query: 119 TVPPIFFFVVDLTS-ETENLDSLKESIITSLSLLPPNALIGLITYGNVVQLHDLSSETID 177
           TVPP    V  L+  ++E   S+  + I    LL P AL    +YG  +Q   L +    
Sbjct: 259 TVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALT--FSYGRALQASALKAWGGK 316

Query: 178 RCNVFRGDREYQLEALTEMLTGQ---KPTGPGGAAS 210
           + N+     EY   AL   L  Q    P+G  GAA+
Sbjct: 317 KENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAA 352


>2HI4-A nrPDB
          Length = 495

 Score = 30.4 bits (67), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 16/82 (19%)

Query: 212 LPNAMNKVTPFSLNRFFLPLEQVEFKLNQLLENLSPDQWSVPAGHRPLR---ATGSALNI 268
           +P++  + T  +LN F++P +   F +NQ   N  P+ W  P+  RP R   A G+A+N 
Sbjct: 362 IPHSTTRDT--TLNGFYIPKKCCVF-VNQWQVNHDPELWEDPSEFRPERFLTADGTAIN- 417

Query: 269 ASLLLQGCYKNIPARIILFASG 290
                    K +  +++LF  G
Sbjct: 418 ---------KPLSEKMMLFGMG 430


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

2QTV-A nrPDB                                                         1128   0.0  
2NUP-A nrPDB                                                         1079   0.0  
3EH1-A nrPDB                                                          611   e-175
2NUP-B nrPDB                                                          591   e-169
3EH2-A nrPDB                                                          461   e-130
5KYW-B nrPDB                                                          459   e-129
1PD0-A nrPDB                                                          330   1e-90
1M2V-B nrPDB                                                          324   1e-88

Sequences not found previously or not previously below threshold:

3CZE-A nrPDB                                                           30   3.5  
1SKZ-A nrPDB                                                           30   4.2  
3L5K-A nrPDB                                                           29   7.0  


CONVERGED!
>2QTV-A nrPDB
          Length = 772

 Score = 1128 bits (2917), Expect = 0.0,   Method: Composition-based stats.
 Identities = 767/767 (100%), Positives = 767/767 (100%)

Query: 2   DFETNEDINGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDELNVAPYNPVVCSGPHC 61
           DFETNEDINGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDELNVAPYNPVVCSGPHC
Sbjct: 6   DFETNEDINGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDELNVAPYNPVVCSGPHC 65

Query: 62  KSILNPYCVIDPRNSSWSCPICNSRNHLPPQYTNLSQENMPLELQSTTIEYITNKPVTVP 121
           KSILNPYCVIDPRNSSWSCPICNSRNHLPPQYTNLSQENMPLELQSTTIEYITNKPVTVP
Sbjct: 66  KSILNPYCVIDPRNSSWSCPICNSRNHLPPQYTNLSQENMPLELQSTTIEYITNKPVTVP 125

Query: 122 PIFFFVVDLTSETENLDSLKESIITSLSLLPPNALIGLITYGNVVQLHDLSSETIDRCNV 181
           PIFFFVVDLTSETENLDSLKESIITSLSLLPPNALIGLITYGNVVQLHDLSSETIDRCNV
Sbjct: 126 PIFFFVVDLTSETENLDSLKESIITSLSLLPPNALIGLITYGNVVQLHDLSSETIDRCNV 185

Query: 182 FRGDREYQLEALTEMLTGQKPTGPGGAASHLPNAMNKVTPFSLNRFFLPLEQVEFKLNQL 241
           FRGDREYQLEALTEMLTGQKPTGPGGAASHLPNAMNKVTPFSLNRFFLPLEQVEFKLNQL
Sbjct: 186 FRGDREYQLEALTEMLTGQKPTGPGGAASHLPNAMNKVTPFSLNRFFLPLEQVEFKLNQL 245

Query: 242 LENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYKNIPARIILFASGPGTVAPGLIVN 301
           LENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYKNIPARIILFASGPGTVAPGLIVN
Sbjct: 246 LENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYKNIPARIILFASGPGTVAPGLIVN 305

Query: 302 SELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDIFAGCYDQIGMSEMKQL 361
           SELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDIFAGCYDQIGMSEMKQL
Sbjct: 306 SELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDIFAGCYDQIGMSEMKQL 365

Query: 362 TDSTGGVLLLTDAFSTAIFKQSYLRLFAKDEEGYLKMAFNGNMAVKTSKDLKVQGLIGHA 421
           TDSTGGVLLLTDAFSTAIFKQSYLRLFAKDEEGYLKMAFNGNMAVKTSKDLKVQGLIGHA
Sbjct: 366 TDSTGGVLLLTDAFSTAIFKQSYLRLFAKDEEGYLKMAFNGNMAVKTSKDLKVQGLIGHA 425

Query: 422 SAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIANTAANSNPMMSAPGSADR 481
           SAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIANTAANSNPMMSAPGSADR
Sbjct: 426 SAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIANTAANSNPMMSAPGSADR 485

Query: 482 PHLAYTQFITTYQHSSGTNRIRVTTVANQLLPFGTPAIAASFDQEAAAVLMARIAVHKAE 541
           PHLAYTQFITTYQHSSGTNRIRVTTVANQLLPFGTPAIAASFDQEAAAVLMARIAVHKAE
Sbjct: 486 PHLAYTQFITTYQHSSGTNRIRVTTVANQLLPFGTPAIAASFDQEAAAVLMARIAVHKAE 545

Query: 542 TDDGADVIRWLDRTLIKLCQKYADYNKDDPQSFRLAPNFSLYPQFTYYLRRSQFLSVFNN 601
           TDDGADVIRWLDRTLIKLCQKYADYNKDDPQSFRLAPNFSLYPQFTYYLRRSQFLSVFNN
Sbjct: 546 TDDGADVIRWLDRTLIKLCQKYADYNKDDPQSFRLAPNFSLYPQFTYYLRRSQFLSVFNN 605

Query: 602 SPDETAFYRHIFTREDTTNSLIMIQPTLTSFSMEDDPQPVLLDSISVKPNTILLLDTFFF 661
           SPDETAFYRHIFTREDTTNSLIMIQPTLTSFSMEDDPQPVLLDSISVKPNTILLLDTFFF
Sbjct: 606 SPDETAFYRHIFTREDTTNSLIMIQPTLTSFSMEDDPQPVLLDSISVKPNTILLLDTFFF 665

Query: 662 ILIYHGEQIAQWRKAGYQDDPQYADFKALLEEPKLEAAELLVDRFPLPRFIDTEAGGSQA 721
           ILIYHGEQIAQWRKAGYQDDPQYADFKALLEEPKLEAAELLVDRFPLPRFIDTEAGGSQA
Sbjct: 666 ILIYHGEQIAQWRKAGYQDDPQYADFKALLEEPKLEAAELLVDRFPLPRFIDTEAGGSQA 725

Query: 722 RFLLSKLNPSDNYQDMARGGSTIVLTDDVSLQNFMTHLQQVAVSGQA 768
           RFLLSKLNPSDNYQDMARGGSTIVLTDDVSLQNFMTHLQQVAVSGQA
Sbjct: 726 RFLLSKLNPSDNYQDMARGGSTIVLTDDVSLQNFMTHLQQVAVSGQA 772


>2NUP-A nrPDB
          Length = 769

 Score = 1079 bits (2789), Expect = 0.0,   Method: Composition-based stats.
 Identities = 384/773 (49%), Positives = 515/773 (66%), Gaps = 22/773 (2%)

Query: 3   FETNEDINGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDELNVAPYNPVVCSGPHCK 62
            + NE+ +GVRF+WNV+PS+R +A   VVPV  L+TPLKE  +L    Y PV+CS   C+
Sbjct: 12  IQQNEERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVLCSRTTCR 71

Query: 63  SILNPYCVIDPRNSSWSCPICNSRNHLPPQYTNLSQENMPLEL--QSTTIEYITNKPVTV 120
           ++LNP C +D R   W+C  C  RN  PP Y  +S+ N P EL  Q ++IEY+  +   +
Sbjct: 72  AVLNPLCQVDYRAKLWACNFCYQRNQFPPSYAGISELNQPAELLPQFSSIEYVVLRGPQM 131

Query: 121 PPIFFFVVDLTSETENLDSLKESIITSLSLLPPNALIGLITYGNVVQLHDLSSETIDRCN 180
           P IF +VVD   E E+L +LKES+  SLSLLPP AL+GLIT+G +VQ+H+L  E I +  
Sbjct: 132 PLIFLYVVDTCMEDEDLQALKESMQMSLSLLPPTALVGLITFGRMVQVHELGCEGISKSY 191

Query: 181 VFRGDREYQLEALTEMLTGQKPTGPGGAASHLPNAMNKVTPFSLNRFFLPLEQVEFKLNQ 240
           VFRG ++   + L EML   K   P   A+  P       P   NRF  P+++++  L  
Sbjct: 192 VFRGTKDLSAKQLQEMLGLSKV--PVTQATRGPQVQQ---PPPSNRFLQPVQKIDMNLTD 246

Query: 241 LLENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYKNIPARIILFASGPGTVAPGLIV 300
           LL  L  D W VP G RPLR++G AL+IA  LL+  + N  ARI++F  GP T  PG++V
Sbjct: 247 LLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPATQGPGMVV 306

Query: 301 NSELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDIFAGCYDQIGMSEMKQ 360
             ELK P+RS HDID D+A++ KK  K +  +A R A  GH +DI+A   DQ G+ EMK 
Sbjct: 307 GDELKTPIRSWHDIDKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQTGLLEMKC 366

Query: 361 LTDSTGGVLLLTDAFSTAIFKQSYLRLFAKDEEGYLKMAFNGNMAVKTSKDLKVQGLIGH 420
             + TGG +++ D+F+T++FKQ++ R+F KD  G  KM F G + +KTS+++K+ G IG 
Sbjct: 367 CPNLTGGYMVMGDSFNTSLFKQTFQRVFTKDMHGQFKMGFGGTLEIKTSREIKISGAIGP 426

Query: 421 ASAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIANTAANSNPMMSAPGSAD 480
             ++  +    +SE+EIG G T  WK+  LSP  + AI+FE+ N   ++ P+      A 
Sbjct: 427 CVSLN-SKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQ--HNAPIPQGGRGA- 482

Query: 481 RPHLAYTQFITTYQHSSGTNRIRVTTVANQLLPFGTPA--IAASFDQEAAAVLMARIAVH 538
                  QF+T YQHSSG  RIRVTT+A       T    IAASFDQEAAA+LMAR+A++
Sbjct: 483 ------IQFVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAILMARLAIY 536

Query: 539 KAETDDGADVIRWLDRTLIKLCQKYADYNKDDPQSFRLAPNFSLYPQFTYYLRRSQFLSV 598
           +AET++G DV+RWLDR LI+LCQK+ +Y+KDDP SFR +  FSLYPQF ++LRRS FL V
Sbjct: 537 RAETEEGPDVLRWLDRQLIRLCQKFGEYHKDDPSSFRFSETFSLYPQFMFHLRRSSFLQV 596

Query: 599 FNNSPDETAFYRHIFTREDTTNSLIMIQPTLTSFSMEDDPQPVLLDSISVKPNTILLLDT 658
           FNNSPDE+++YRH F R+D T SLIMIQP L ++S    P+PVLLDS S+  + ILL+DT
Sbjct: 597 FNNSPDESSYYRHHFMRQDLTQSLIMIQPILYAYSFSGPPEPVLLDSSSILADRILLMDT 656

Query: 659 FFFILIYHGEQIAQWRKAGYQDDPQYADFKALLEEPKLEAAELLVDRFPLPRFIDTEAGG 718
           FF ILIYHGE IAQWRK+GYQD P+Y +F+ LL+ P  +A E+L  RFP+PR+IDTE GG
Sbjct: 657 FFQILIYHGETIAQWRKSGYQDMPEYENFRHLLQAPVDDAQEILHSRFPMPRYIDTEHGG 716

Query: 719 SQARFLLSKLNPSDNYQDMARGG---STIVLTDDVSLQNFMTHLQQVAVSGQA 768
           SQARFLLSK+NPS  + +M   G      +LTDDVSLQ FM HL+++AVS  A
Sbjct: 717 SQARFLLSKVNPSQTHNNMYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA 769


>3EH1-A nrPDB
          Length = 751

 Score =  611 bits (1575), Expect = e-175,   Method: Composition-based stats.
 Identities = 129/649 (19%), Positives = 254/649 (39%), Gaps = 104/649 (16%)

Query: 6   NEDINGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDELNVAPYNPVVCSGPHCKSIL 65
           N   +  R T    P T++  N   +P+G L  P ++  +L V   N +V     C++ +
Sbjct: 37  NCSPDSFRCTLTNIPQTQALLNKAKLPLGLLLHPFRDLTQLPVITSNTIV-RCRSCRTYI 95

Query: 66  NPYCVIDPRNSSWSCPICNSRNHLPPQYT------NLSQENMPLELQSTTIEYITNKPVT 119
           NP+     +   W C +C   N +P ++       +  + +   E+Q++T+E+I +    
Sbjct: 96  NPFVSFIDQ-RRWKCNLCYRVNDVPEEFMYNPLTRSYGEPHKRPEVQNSTVEFIASSDYM 154

Query: 120 V----PPIFFFVVDLTS---ETENLDSLKESIITSLSLLPPNAL--IGLITYGNVVQLHD 170
           +    P ++ FV+D++    E   L  L +S++ +L  LP ++   IG +T+ + +  ++
Sbjct: 155 LRPPQPAVYLFVLDVSHNAVEAGYLTILCQSLLENLDKLPGDSRTRIGFMTFDSTIHFYN 214

Query: 171 LSSETIDRCNVFRGDREYQLEALTEMLTGQKPTGPGGAASHLPNAMNKVTPFSLNRFFLP 230
           L            G  + Q+  ++++     PT         P+++       L   +  
Sbjct: 215 LQ----------EGLSQPQMLIVSDIDDVFLPT---------PDSL-------LVNLYES 248

Query: 231 LEQVEFKLNQLLENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYKNI---PARIILF 287
            E ++  LN L           P      R T SAL  A   LQ  +K +     R+ +F
Sbjct: 249 KELIKDLLNAL-----------PNMFTNTRETHSALGPA---LQAAFKLMSPTGGRVSVF 294

Query: 288 ASGPGTVAPGLIVNSELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDIFA 347
            +   ++  GL+ + E  +         +   QH   A  FY ++A   +     VD+F 
Sbjct: 295 QTQLPSLGAGLLQSREDPN-----QRSSTKVVQHLGPATDFYKKLALDCSGQQTAVDLFL 349

Query: 348 GCYDQIGMSEMKQLTDSTGGVLLLTDAFSTAIFKQSYLRLFAKDEEGYL--KMAFNGNMA 405
                  ++ +  ++  + G +    +F       S      KD + YL  K+ F   M 
Sbjct: 350 LSSQYSDLASLACMSKYSAGCIYYYPSFHYT-HNPSQAEKLQKDLKRYLTRKIGFEAVMR 408

Query: 406 VKTSKDLKVQGLIGHASAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIANT 465
           ++ +K L +    G+                  + +T    +A+++P   +A+   I  +
Sbjct: 409 IRCTKGLSMHTFHGN----------------FFVRSTDLLSLANINPDAGFAVQLSIEES 452

Query: 466 AANSNPMMSAPGSADRPHLAYTQFITTYQHSSGTNRIRVTTVANQLLPFGTPA--IAASF 523
             +++             L   Q    Y  S G  RIRV T+    LP  +    + A  
Sbjct: 453 LTDTS-------------LVCFQTALLYTSSKGERRIRVHTLC---LPVVSSLADVYAGV 496

Query: 524 DQEAAAVLMARIAVHKAETDDGADVIRWLDRTLIKLCQKYADYNKDDPQSFRLAP-NFSL 582
           D +AA  L+A +AV ++ +   +D    L   ++     Y     +   S  +AP +  L
Sbjct: 497 DVQAAICLLANMAVDRSVSSSLSDARDALVNAVVDSLSAYGSTVSNLQHSALMAPSSLKL 556

Query: 583 YPQFTY-YLRRSQFLSVFNNSPDETAFYRHIFTREDTTNSLIMIQPTLT 630
           +P +    L++  F +  +   D+  +       +   + + MI P L 
Sbjct: 557 FPLYVLALLKQKAFRTGTSTRLDDRVYAMCQIKSQPLVHLMKMIHPNLY 605


>2NUP-B nrPDB
          Length = 753

 Score =  591 bits (1524), Expect = e-169,   Method: Composition-based stats.
 Identities = 140/709 (19%), Positives = 264/709 (37%), Gaps = 119/709 (16%)

Query: 2   DFET-NEDINGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDELNVAPYNPVVCSGPH 60
           D +  N +    R T    P T++  N   +P+G L  P K+  +L V   + +V     
Sbjct: 35  DIQKLNCNPELFRCTLTSIPQTQALLNKAKLPLGLLLHPFKDLVQLPVVTSSTIV-RCRS 93

Query: 61  CKSILNPYCVIDPRNSSWSCPICNSRNHLPPQY------TNLSQENMPLELQSTTIEYIT 114
           C++ +NP+     +   W C +C   N +P ++          + +   E+Q+ TIE++ 
Sbjct: 94  CRTYINPFVSFLDQ-RRWKCNLCYRVNDVPEEFLYNPLTRVYGEPHRRPEVQNATIEFMA 152

Query: 115 NKPVTV----PPIFFFVVDLTS---ETENLDSLKESIITSLSLLPPNAL--IGLITYGNV 165
                +    PP++ FV D++    ET  L+S+ +S++ +L LLP N    IG IT+ + 
Sbjct: 153 PSEYMLRPPQPPVYLFVFDVSHNAVETGYLNSVCQSLLDNLDLLPGNTRTKIGFITFDST 212

Query: 166 VQLHDLSSETIDRCNVFRGDREYQLEALTEMLTGQKPTGPGGAASHLPNAMNKVTPFSLN 225
           +  + L               + Q+  ++++     P                       
Sbjct: 213 IHFYGLQESL----------SQPQMLIVSDIEDVFIPMP--------------------- 241

Query: 226 RFFLPLEQVEFKLNQLLENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYKNI---PA 282
                 E +   LN+  E +     ++P        T SAL  A   LQ  +K +     
Sbjct: 242 ------ENLLVNLNESKELVQDLLKTLPQMFTKTLETQSALGPA---LQAAFKLMSPTGG 292

Query: 283 RIILFASGPGTVAPGLIVNSELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHT 342
           R+ +F +   T+  G +   E  +   S  DI      H   +  FY ++A   +     
Sbjct: 293 RMSVFQTQLPTLGVGALKPREEPNHRSSAKDI------HMTPSTDFYKKLALDCSGQQVA 346

Query: 343 VDIFAGCYDQIGMSEMKQLTDSTGGVLLLTDAFSTAIFKQSYLRLFAKDEEGYL--KMAF 400
           VD+F        ++ +  ++  + G +    ++         ++   K+ + YL  K+ F
Sbjct: 347 VDLFLLSGQYSDLASLGCISRYSAGSVYYYPSYHHQ-HNPVQVQKLQKELQRYLTRKIGF 405

Query: 401 NGNMAVKTSKDLKVQGLIGHASAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFF 460
              M ++ +K L +    G+                  + +T    + +++P   YA+  
Sbjct: 406 EAVMRIRCTKGLSIHTFHGN----------------FFVRSTDLLSLPNVNPDAGYAV-- 447

Query: 461 EIANTAANSNPMMSAPGSADRPHLAYTQFITTYQHSSGTNRIRVTTVANQLLPFGTPA-- 518
                       MS   S     L   Q    Y  S G  RIRV T+    LP  +    
Sbjct: 448 -----------QMSVEESLTDTQLVSFQSALLYTSSKGERRIRVHTLC---LPVVSTLND 493

Query: 519 IAASFDQEAAAVLMARIAVHKAETDDGADVIRWLDRTLIKLCQKYADYNKDDPQSFRLAP 578
           +    D +A + L+A +AV ++ T   +D    L   +I     Y      + Q   + P
Sbjct: 494 VFLGADVQAISGLLANMAVDRSMTASLSDARDALVNAVIDSLSAYRSSVLSNQQPGLMVP 553

Query: 579 -NFSLYPQFTY-YLRRSQFLSVFNNSPDETAFYRHIFTREDTTNSLIMIQPTLT------ 630
            +  L+P F    L++  F +  N   DE  F       +     ++   P+L       
Sbjct: 554 FSLRLFPLFVLALLKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLS 613

Query: 631 ---SFSMEDD--PQPVLLDSI--SVKPNTILLLDTFFFILIYHGEQIAQ 672
              + ++ D   PQP +L      +  +   L+D    ++++ G+   Q
Sbjct: 614 DEGALNISDRTIPQPPILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCTQ 662


>3EH2-A nrPDB
          Length = 766

 Score =  461 bits (1187), Expect = e-130,   Method: Composition-based stats.
 Identities = 120/709 (16%), Positives = 234/709 (33%), Gaps = 115/709 (16%)

Query: 4   ETNEDINGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDELNVAPY-------NPVVC 56
           + N     +R T    P T   A    VP+  +  PL        +PY        P+ C
Sbjct: 38  QGNASPRYIRCTSYNIPCTSDMAKQAQVPLAAVIKPLARLPPEEASPYVVDHGESGPLRC 97

Query: 57  SGPHCKSILNPYCVIDPRNSSWSCPICNSRNHLPPQY--------TNLSQENMP-LELQS 107
           +   CK+ + P+         + C  C+  N +PPQY          +   + P L L S
Sbjct: 98  N--RCKAYMCPFMQFIEGGRRFQCCFCSCINDVPPQYFQHLDHTGKRVDAYDRPELSLGS 155

Query: 108 ----TTIEYITNKPVTVPPIFFFVVDLTSE---TENLDSLKESIITSLSLLPPNA----- 155
                T++Y  N     PP F F++D++     T  +  L E + + L  LP        
Sbjct: 156 YEFLATVDYCKNNKFPSPPAFIFMIDVSYNAIRTGLVRLLCEELKSLLDFLPREGGAEES 215

Query: 156 --LIGLITYGNVVQLHDLSSETIDRCNVFRGDREYQLEALTEMLTGQKPTGPGGAASHLP 213
              +G +TY  V+  +++ S             + Q+  ++++                 
Sbjct: 216 AIRVGFVTYNKVLHFYNVKSSL----------AQPQMMVVSDVADM-------------- 251

Query: 214 NAMNKVTPFSLNRFFLPLEQVEFKLNQLLENLSPDQWSVPAGHRPLRATGSALNIASLLL 273
                     L+ F + + +    +  LL+ + P+ ++       +        + +L  
Sbjct: 252 ------FVPLLDGFLVNVNESRAVITSLLDQI-PEMFADTRETETVFVPVIQAGMEALKA 304

Query: 274 QGCYKNIPARIILFASG-PGTVAPGLIVNSELKDPLRSHHDIDSDHAQH-YKKACKFYNQ 331
             C      ++ LF +  P   APG + N +          I++D  +  ++     Y  
Sbjct: 305 AEC----AGKLFLFHTSLPIAEAPGKLKNRD------DRKLINTDKEKTLFQPQTGAYQT 354

Query: 332 IAQRVAANGHTVDIFAGCYDQIGMSEMKQLTDSTGGVLLLTDAFSTAIFKQSYLRLFAKD 391
           +A+   A G  VD+F      + ++ +  +   TGG +    +F     ++ +L    +D
Sbjct: 355 LAKECVAQGCCVDLFLFPNQYVDVATLSVVPQLTGGSVYKYASFQVENDQERFLSDLRRD 414

Query: 392 EEGYLKMAFNGNMAVKTSKDLKVQGLIGHASAVKKTDANNISESEIGIGATSTWKMASLS 451
            +    + F+  M V+TS  ++     G       TD                 ++A L 
Sbjct: 415 VQKV--VGFDAVMRVRTSTGIRAVDFFGAFYMSNTTDV----------------ELAGLD 456

Query: 452 PYHSYAIFFEIANTAANSNPMMSAPGSADRPHLAYTQFITTYQHSSGTNRIRVTTVANQL 511
              +  + F+  +     +              A  Q    Y   +G  R+R+  +A   
Sbjct: 457 GDKTVTVEFKHDDRLNEESG-------------ALLQCALLYTSCAGQRRLRIHNLALNC 503

Query: 512 LPFGTPAIAASFDQEAAAVLMARIAVHKAETDDGADVIRWLDRTLIKLCQKYADYNKDDP 571
                     + + +     MA+ A           V   L     ++   Y        
Sbjct: 504 CTQLADL-YRNCETDTLINYMAKFAYRGVLNSPVKAVRDTLITQCAQILACYRKNCASPS 562

Query: 572 QSFRLA--PNFSLYPQFT-YYLRRSQFLSVFNNSPDETAFYRHIFTREDTTNSLIMIQPT 628
            + +L       L P +    L+          + D+ A+ R + T  D T + +   P 
Sbjct: 563 SAGQLILPECMKLLPVYLNCVLKSDVLQPGAEVTTDDRAYVRQLVTSMDVTETNVFFYPR 622

Query: 629 LTSFSME-----DDPQPVLLDSISVKPNTILLLDTFFFILIYHGEQIAQ 672
           L   +        +P  V      +    I LL+    + ++ G  + Q
Sbjct: 623 LLPLTKSPVESTTEPPAVRASEERLSNGDIYLLENGLNLFLWVGASVQQ 671


>5KYW-B nrPDB
          Length = 770

 Score =  459 bits (1181), Expect = e-129,   Method: Composition-based stats.
 Identities = 119/662 (17%), Positives = 222/662 (33%), Gaps = 112/662 (16%)

Query: 4   ETNEDINGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDE-------LNVAPYNPVVC 56
           + N     +R T   FP T   A    +P+  +  P             +N     PV C
Sbjct: 42  QGNASPRFIRCTTYCFPCTSDMAKQAQIPLAAVIKPFATIPSNESPLYLVNHGESGPVRC 101

Query: 57  SGPHCKSILNPYCVIDPRNSSWSCPICNSRNHLPPQY--------TNLSQENMPLELQST 108
           +   CK+ + P+         + C  CN  N +PP Y          L     P EL   
Sbjct: 102 N--RCKAYMCPFMQFIEGGRRYQCGFCNCVNDVPPFYFQHLDHIGRRLDHYEKP-ELSLG 158

Query: 109 TIEYITN------KPVTVPPIFFFVVDLTSET---ENLDSLKESIITSLSLLPPNA---- 155
           + EY+             PP F F++D++        +  + E + T L  +P       
Sbjct: 159 SYEYVATLDYCRKSKPPNPPAFIFMIDVSYSNIKNGLVKLICEELKTMLEKIPKEEQEET 218

Query: 156 ---LIGLITYGNVVQLHDLSSETIDRCNVFRGDREYQLEALTEMLTGQKPTGPGGAASHL 212
               +G ITY  V+   ++ S             + Q+  +T+                 
Sbjct: 219 SAIRVGFITYNKVLHFFNVKSNL----------AQPQMMVVTD----------------- 251

Query: 213 PNAMNKVTPFSLNRFFLPLEQVEFKLNQLLENLSPDQWSVPAGHRPLRATGSALNIASLL 272
              + +V    L+ F +  ++ +  ++ LL+ + PD ++    +  + A      + +L 
Sbjct: 252 ---VGEVFVPLLDGFLVNYQESQSVIHNLLDQI-PDMFADSNENETVFAPVIQAGMEALK 307

Query: 273 LQGCYKNIPARIILFASG-PGTVAPGLIVNSELKDPLRSHHDIDSDHAQ-HYKKACKFYN 330
              C    P ++ +F S  P   APG + N + K        +++D  +  ++     Y+
Sbjct: 308 AADC----PGKLFIFHSSLPTAEAPGKLKNRDDK------KLVNTDKEKILFQPQTNVYD 357

Query: 331 QIAQRVAANGHTVDIFAGCYDQIGMSEMKQLTDSTGGVLLLTDAFSTAIFKQSYLRLFAK 390
            +A+   A+G +V +F      + ++ +  +   TGG L   + F   + +Q +L     
Sbjct: 358 SLAKDCVAHGCSVTLFLFPSQYVDVASLGLVPQLTGGTLYKYNNFQMHLDRQQFLNDLRN 417

Query: 391 DEEGYLKMAFNGNMAVKTSKDLKVQGLIGHASAVKKTDANNISESEIGIGATSTWKMASL 450
           D E   K+ F+  M V+TS   +     G       TD                 +MA++
Sbjct: 418 DIEK--KIGFDAIMRVRTSTGFRATDFFGGILMNNTTDV----------------EMAAI 459

Query: 451 SPYHSYAIFFEIANTAANSNPMMSAPGSADRPHLAYTQFITTYQHSSGTNRIRVTTVANQ 510
               +  + F+  +  +  +              A  Q    Y   SG  R+R+  +   
Sbjct: 460 DCDKAVTVEFKHDDKLSEDSG-------------ALIQCAVLYTTISGQRRLRIHNLGLN 506

Query: 511 LLPFGTPAIAASFDQEAAAVLMARIAVHKAETDDGADVIRWLDRTLIKLCQKYAD--YNK 568
                      S + +A     A+ A           +   L      +   Y     + 
Sbjct: 507 CSSQLADL-YKSCETDALINFFAKSAFKAVLHQPLKVIREILVNQTAHMLACYRKNCASP 565

Query: 569 DDPQSFRLAPNFSLYPQFT-YYLRRSQFLSVFNNSPDETAFYRHIFTREDTTNSLIMIQP 627
                  L  +  + P +    L+    LS    S DE A+ R +       +S +   P
Sbjct: 566 SAASQLILPDSMKVLPVYMNCLLKNCVLLSRPEISTDERAYQRQLVMTMGVADSQLFFYP 625

Query: 628 TL 629
            L
Sbjct: 626 QL 627


>1PD0-A nrPDB
          Length = 810

 Score =  330 bits (845), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 114/655 (17%), Positives = 213/655 (32%), Gaps = 99/655 (15%)

Query: 5   TNEDINGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKE-YDELNVAPYNP--VVCSGPHC 61
           +N   + +R T N  P   S    + +P G +  P +  YD+++  P N   ++     C
Sbjct: 59  SNASPDYIRSTLNAVPKNSSLLKKSKLPFGLVIRPYQHLYDDIDPPPLNEDGLIVRCRRC 118

Query: 62  KSILNPYCVIDPRNSSWSCPICNSRNHLPPQYTNLSQENMPL------ELQSTTIEYITN 115
           +S +NP+     +   W C  C   N +P Q  + S  N P       E++   +EY+  
Sbjct: 119 RSYMNPFVTFIEQGRRWRCNFCRLANDVPMQ-MDQSDPNDPKSRYDRNEIKCAVMEYMAP 177

Query: 116 KPVTV----PPIFFFVVDLTSETENLDSLKESIIT---SLSLLPPN---ALIGLITYGNV 165
           K  T+    P  + F++D++  +     L  +I T   +L  +P +     I ++   N 
Sbjct: 178 KEYTLRQPPPATYCFLIDVSQSSIKSGLLATTINTLLQNLDSIPNHDERTRISILCVDNA 237

Query: 166 VQLHDLSSETIDRCNVFRGDREYQLEALTEMLTGQKPTGPGGAASHLPNAMNKVTPFSLN 225
           +    +    +D  N      +  +  + ++     P                      N
Sbjct: 238 IHYFKIP---LDSENNEESADQINMMDIADLEEPFLPRP--------------------N 274

Query: 226 RFFLPLEQVEFKLNQLLENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYKNIPARII 285
              + L+     +  LL  +       P   +    T  AL  A          +  +II
Sbjct: 275 SMVVSLKACRQNIETLLTKI-------PQIFQSNLITNFALGPALKSAYHLIGGVGGKII 327

Query: 286 LFASGPGTVAPGLIVNSELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDI 345
           + +     +  G +        + +      + AQ       FY       +    TVD+
Sbjct: 328 VVSGTLPNLGIGKLQRRNESGVVNT----SKETAQLLSCQDSFYKNFTIDCSKVQITVDL 383

Query: 346 FAGCYDQIGMSEMKQLTDSTGGVLLLTDAFSTAIFKQSYLRLFAKDEEGYLKMAF--NGN 403
           F    D + ++ +  L+  T G       FS      + +  F+ +   ++ M F     
Sbjct: 384 FLASEDYMDVASLSNLSRFTAGQTHFYPGFSGK--NPNDIVKFSTEFAKHISMDFCMETV 441

Query: 404 MAVKTSKDLKVQGLIGHASAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIA 463
           M  + S  L++    GH                    ++     +++    SY     + 
Sbjct: 442 MRARGSTGLRMSRFYGH----------------FFNRSSDLCAFSTMPRDQSYLFEVNVD 485

Query: 464 NTAANSNPMMSAPGSADRPHLAYTQFITTYQHSSGTNRIRVTTVANQLLPFGTPA--IAA 521
            +                    Y Q       ++   RIR+ T+A   +P       + A
Sbjct: 486 ESIM--------------ADYCYVQVAVLLSLNNSQRRIRIITLA---MPTTESLAEVYA 528

Query: 522 SFDQEAAAVLMARIAVHKAETDDGADVIRWLDRTLIKLCQKYAD----YNKDDPQSFRLA 577
           S DQ A A      AV KA      D    +++++  +   Y       N       RL 
Sbjct: 529 SADQLAIASFYNSKAVEKALNSSLDDARVLINKSVQDILATYKKEIVVSNTAGGAPLRLC 588

Query: 578 PNFSLYPQFTYYL-RRSQFLSVFNNSPDETAFYRHIFTREDTTNSLIMIQPTLTS 631
            N  ++P   + L +   F S    S D  A   +          +  I P + S
Sbjct: 589 ANLRMFPLLMHSLTKHMAFRSGIVPS-DHRASALNNLESLPLKYLIKNIYPDVYS 642


>1M2V-B nrPDB
          Length = 926

 Score =  324 bits (829), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 114/655 (17%), Positives = 213/655 (32%), Gaps = 99/655 (15%)

Query: 5   TNEDINGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKE-YDELNVAPYNP--VVCSGPHC 61
           +N   + +R T N  P   S    + +P G +  P +  YD+++  P N   ++     C
Sbjct: 175 SNASPDYIRSTLNAVPKNSSLLKKSKLPFGLVIRPYQHLYDDIDPPPLNEDGLIVRCRRC 234

Query: 62  KSILNPYCVIDPRNSSWSCPICNSRNHLPPQYTNLSQENMPL------ELQSTTIEYITN 115
           +S +NP+     +   W C  C   N +P Q  + S  N P       E++   +EY+  
Sbjct: 235 RSYMNPFVTFIEQGRRWRCNFCRLANDVPMQ-MDQSDPNDPKSRYDRNEIKCAVMEYMAP 293

Query: 116 KPVTV----PPIFFFVVDLTSETENLDSLKESIIT---SLSLLPPN---ALIGLITYGNV 165
           K  T+    P  + F++D++  +     L  +I T   +L  +P +     I ++   N 
Sbjct: 294 KEYTLRQPPPATYCFLIDVSQSSIKSGLLATTINTLLQNLDSIPNHDERTRISILCVDNA 353

Query: 166 VQLHDLSSETIDRCNVFRGDREYQLEALTEMLTGQKPTGPGGAASHLPNAMNKVTPFSLN 225
           +    +    +D  N      +  +  + ++     P                      N
Sbjct: 354 IHYFKIP---LDSENNEESADQINMMDIADLEEPFLPRP--------------------N 390

Query: 226 RFFLPLEQVEFKLNQLLENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYKNIPARII 285
              + L+     +  LL  +       P   +    T  AL  A          +  +II
Sbjct: 391 SMVVSLKACRQNIETLLTKI-------PQIFQSNLITNFALGPALKSAYHLIGGVGGKII 443

Query: 286 LFASGPGTVAPGLIVNSELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDI 345
           + +     +  G +        + +      + AQ       FY       +    TVD+
Sbjct: 444 VVSGTLPNLGIGKLQRRNESGVVNT----SKETAQLLSCQDSFYKNFTIDCSKVQITVDL 499

Query: 346 FAGCYDQIGMSEMKQLTDSTGGVLLLTDAFSTAIFKQSYLRLFAKDEEGYLKMAF--NGN 403
           F    D + ++ +  L+  T G       FS      + +  F+ +   ++ M F     
Sbjct: 500 FLASEDYMDVASLSNLSRFTAGQTHFYPGFSGK--NPNDIVKFSTEFAKHISMDFCMETV 557

Query: 404 MAVKTSKDLKVQGLIGHASAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIA 463
           M  + S  L++    GH                    ++     +++    SY     + 
Sbjct: 558 MRARGSTGLRMSRFYGH----------------FFNRSSDLCAFSTMPRDQSYLFEVNVD 601

Query: 464 NTAANSNPMMSAPGSADRPHLAYTQFITTYQHSSGTNRIRVTTVANQLLPFGTPA--IAA 521
            +                    Y Q       ++   RIR+ T+A   +P       + A
Sbjct: 602 ESIM--------------ADYCYVQVAVLLSLNNSQRRIRIITLA---MPTTESLAEVYA 644

Query: 522 SFDQEAAAVLMARIAVHKAETDDGADVIRWLDRTLIKLCQKYAD----YNKDDPQSFRLA 577
           S DQ A A      AV KA      D    +++++  +   Y       N       RL 
Sbjct: 645 SADQLAIASFYNSKAVEKALNSSLDDARVLINKSVQDILATYKKEIVVSNTAGGAPLRLC 704

Query: 578 PNFSLYPQFTYYL-RRSQFLSVFNNSPDETAFYRHIFTREDTTNSLIMIQPTLTS 631
            N  ++P   + L +   F S    S D  A   +          +  I P + S
Sbjct: 705 ANLRMFPLLMHSLTKHMAFRSGIVPS-DHRASALNNLESLPLKYLIKNIYPDVYS 758


>3CZE-A nrPDB
          Length = 644

 Score = 30.2 bits (66), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 663 LIYHGEQIAQWRKAGYQDDPQYADFKALLEEPKLEAA 699
           LIY G+++A     GY+DDP        L  P ++  
Sbjct: 489 LIYMGDELAMVNDPGYRDDPHRQHEGRWLHRPAMDWQ 525


>1SKZ-A nrPDB
          Length = 119

 Score = 29.8 bits (65), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 4/31 (12%)

Query: 56 CSGPHCKSILNPYCVIDPRNSSWSCPICNSR 86
          CSG  C+    P+     + S + C  C  R
Sbjct: 28 CSGVRCRVH-CPHGF---QRSRYGCEFCKCR 54


>3L5K-A nrPDB
          Length = 250

 Score = 29.0 bits (63), Expect = 7.0,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 16/86 (18%)

Query: 628 TLTSFSMEDDPQPV---LLDSISVKPNTILLLDTFFFILIYHGEQIAQWRKAGYQDDPQY 684
            L   SM   PQPV   + D   +  +T  L    F  +    ++   W           
Sbjct: 17  NLYFQSMAAPPQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSW----------- 65

Query: 685 ADFKALLEEPK-LEAAELLVDRFPLP 709
            D K+L+   K LEAA++++D   LP
Sbjct: 66  -DVKSLVMGKKALEAAQIIIDVLQLP 90


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.310    0.121    0.309 

Lambda     K      H
   0.267   0.0366    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,476,086
Number of Sequences: 36641
Number of extensions: 969285
Number of successful extensions: 2440
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2337
Number of HSP's gapped (non-prelim): 31
length of query: 768
length of database: 10,336,785
effective HSP length: 105
effective length of query: 663
effective length of database: 6,489,480
effective search space: 4302525240
effective search space used: 4302525240
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 63 (29.0 bits)