BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P14920 (347 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3CUK-A nrPDB 721 0.0 1VE9-A nrPDB 627 e-180 1C0L-A nrPDB 114 9e-26 1NG3-A nrPDB 34 0.11 5FMB-A nrPDB 32 0.33 1ZEJ-A nrPDB 30 1.3 5TUJ-C nrPDB 29 2.7 3MQG-A nrPDB 29 3.8 3DIN-C nrPDB 28 7.2 >3CUK-A nrPDB Length = 347 Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/347 (100%), Positives = 347/347 (100%) Query: 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPN 60 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPN Sbjct: 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPN 60 Query: 61 NPQEADWSQQTFDYLLSHVHSPNAENLGLFLISGYNLFHEAIPDPSWKDTVLGFRKLTPR 120 NPQEADWSQQTFDYLLSHVHSPNAENLGLFLISGYNLFHEAIPDPSWKDTVLGFRKLTPR Sbjct: 61 NPQEADWSQQTFDYLLSHVHSPNAENLGLFLISGYNLFHEAIPDPSWKDTVLGFRKLTPR 120 Query: 121 ELDMFPDYGYGWFHTSLILEGKNYLQWLTERLTERGVKFFQRKVESFEEVAREGADVIVN 180 ELDMFPDYGYGWFHTSLILEGKNYLQWLTERLTERGVKFFQRKVESFEEVAREGADVIVN Sbjct: 121 ELDMFPDYGYGWFHTSLILEGKNYLQWLTERLTERGVKFFQRKVESFEEVAREGADVIVN 180 Query: 181 CTGVWAGALQRDPLLQPGRGQIMKVDAPWMKHFILTHDPERGIYNSPYIIPGTQTVTLGG 240 CTGVWAGALQRDPLLQPGRGQIMKVDAPWMKHFILTHDPERGIYNSPYIIPGTQTVTLGG Sbjct: 181 CTGVWAGALQRDPLLQPGRGQIMKVDAPWMKHFILTHDPERGIYNSPYIIPGTQTVTLGG 240 Query: 241 IFQLGNWSELNNIQDHNTIWEGCCRLEPTLKNARIIGERTGFRPVRPQIRLEREQLRTGP 300 IFQLGNWSELNNIQDHNTIWEGCCRLEPTLKNARIIGERTGFRPVRPQIRLEREQLRTGP Sbjct: 241 IFQLGNWSELNNIQDHNTIWEGCCRLEPTLKNARIIGERTGFRPVRPQIRLEREQLRTGP 300 Query: 301 SNTEVIHNYGHGGYGLTIHWGCALEAAKLFGRILEEKKLSRMPPSHL 347 SNTEVIHNYGHGGYGLTIHWGCALEAAKLFGRILEEKKLSRMPPSHL Sbjct: 301 SNTEVIHNYGHGGYGLTIHWGCALEAAKLFGRILEEKKLSRMPPSHL 347 >1VE9-A nrPDB Length = 347 Score = 627 bits (1618), Expect = e-180, Method: Compositional matrix adjust. Identities = 294/347 (84%), Positives = 321/347 (92%) Query: 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPN 60 MRVVVIGAGVIGLSTALCIHERYHSVLQPLD+KVYADRFTP TTTDVAAGLWQPY S+P+ Sbjct: 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDVKVYADRFTPFTTTDVAAGLWQPYTSEPS 60 Query: 61 NPQEADWSQQTFDYLLSHVHSPNAENLGLFLISGYNLFHEAIPDPSWKDTVLGFRKLTPR 120 NPQEA+W+QQTF+YLLSH+ SPNA N+GL +SGYNLF EA+PDP WKD VLGFRKLTPR Sbjct: 61 NPQEANWNQQTFNYLLSHIGSPNAANMGLTPVSGYNLFREAVPDPYWKDMVLGFRKLTPR 120 Query: 121 ELDMFPDYGYGWFHTSLILEGKNYLQWLTERLTERGVKFFQRKVESFEEVAREGADVIVN 180 ELDMFPDY YGWF+TSLILEG+ YLQWLTERLTERGVKFF RKVESFEEVAR GADVI+N Sbjct: 121 ELDMFPDYRYGWFNTSLILEGRKYLQWLTERLTERGVKFFLRKVESFEEVARGGADVIIN 180 Query: 181 CTGVWAGALQRDPLLQPGRGQIMKVDAPWMKHFILTHDPERGIYNSPYIIPGTQTVTLGG 240 CTGVWAG LQ DPLLQPGRGQI+KVDAPW+K+FI+THD ERGIYNSPYIIPG Q VTLGG Sbjct: 181 CTGVWAGVLQPDPLLQPGRGQIIKVDAPWLKNFIITHDLERGIYNSPYIIPGLQAVTLGG 240 Query: 241 IFQLGNWSELNNIQDHNTIWEGCCRLEPTLKNARIIGERTGFRPVRPQIRLEREQLRTGP 300 FQ+GNW+E+NNIQDHNTIWEGCCRLEPTLK+A+I+GE TGFRPVRPQ+RLEREQLR G Sbjct: 241 TFQVGNWNEINNIQDHNTIWEGCCRLEPTLKDAKIVGEYTGFRPVRPQVRLEREQLRFGS 300 Query: 301 SNTEVIHNYGHGGYGLTIHWGCALEAAKLFGRILEEKKLSRMPPSHL 347 SNTEVIHNYGHGGYGLTIHWGCALE AKLFG++LEE+ L MPPSHL Sbjct: 301 SNTEVIHNYGHGGYGLTIHWGCALEVAKLFGKVLEERNLLTMPPSHL 347 >1C0L-A nrPDB Length = 363 Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 99/357 (27%), Positives = 158/357 (44%), Gaps = 38/357 (10%) Query: 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPNN 61 RVVV+G+GVIGLS+AL + + +SV L + D + + A W P+++ + Sbjct: 8 RVVVLGSGVIGLSSALILARKGYSV-HILARDLPEDVSSQTFASPWAGANWTPFMTLTDG 66 Query: 62 PQEADWSQQTFDYLLSHVHSPNAENLGLFLISGYNLFHEAIPDPSWKDTVLGFRKLTPRE 121 P++A W + TF + V P + L + + + +KD +R L E Sbjct: 67 PRQAKWEESTFKKWVELV--PTGHAMWLKGTRRFAQNEDGLLGHWYKDITPNYRPLPSSE 124 Query: 122 LDMFPDYGYGWFHTSLILEGKNYLQWLTERLTERGVKFFQRKVESFEEVAREGADVIVNC 181 P G + +L + Y Q+L L + G F +R V S E+ A +GAD++VN Sbjct: 125 C---PPGAIGVTYDTLSVHAPKYCQYLARELQKLGATFERRTVTSLEQ-AFDGADLVVNA 180 Query: 182 TGVWAGALQ--RDPLLQPGRGQIMKVDAPWMKHFILTHDPERGIYNSPYIIPGTQTVTLG 239 TG+ A ++ D +P RGQ + V +P + + + DP Y P PG + V G Sbjct: 181 TGLGAKSIAGIDDQAAEPIRGQTVLVKSPCKRCTMDSSDPASPAYIIPR--PGGE-VICG 237 Query: 240 GIFQLGNWSELNNIQDHNTIWEGCCRLEPTLKN------ARIIGERTGFRPVR---PQIR 290 G + +G+W N + I + C RL+PT+ + ++ G RP R P++ Sbjct: 238 GTYGVGDWDLSVNPETVQRILKHCLRLDPTISSDGTIEGIEVLRHNVGLRPARRGGPRVE 297 Query: 291 LEREQL---RTGP--------------SNTEVIHNYGHGGYGLTIHWGCALEAAKLF 330 ER L RT ++H YG G WG A + A+L Sbjct: 298 AERIVLPLDRTKSPLSLGRGSARAAKEKEVTLVHAYGFSSAGYQQSWGAAEDVAQLV 354 >1NG3-A nrPDB Length = 390 Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust. Identities = 33/152 (21%), Positives = 67/152 (44%), Gaps = 20/152 (13%) Query: 175 ADVIVNCTGVWAGALQRDPLLQ----PGRGQIMKV---DAPWMKHFILTHDPERGIYNSP 227 A+ +V +GVW+G + L P +G+ + V D P K L HD Sbjct: 216 ANHVVVASGVWSGMFFKQLGLNNAFLPVKGECLSVWNDDIPLTK--TLYHD-------HC 266 Query: 228 YIIP-GTQTVTLGGIFQLGNWSELNNIQDHNTIWEGCCRLEPTLKNARIIGERTGFRPVR 286 YI+P + + +G + G+WSE ++ ++ + + P ++N ++ G +R Sbjct: 267 YIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKAKTMLPPIQNMKVDRFWAG---LR 323 Query: 287 PQIRLEREQLRTGPSNTEVIHNYGHGGYGLTI 318 P + + + P ++ ++ GH G+ + Sbjct: 324 PGTKDGKPYIGRHPEDSRILFAAGHFRNGILL 355 >5FMB-A nrPDB Length = 665 Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 242 FQLGNWSELNNIQDHNTIWEGCCRLEPTLK--NARIIGERTGFRPVRPQIRL 291 L N+S LN QD++T C L+ T+ N + G T F RP+ R Sbjct: 20 LDLPNFSALNRRQDNSTSSSAGCSLDQTVAPGNLTLCGNATLFTTFRPKARF 71 >1ZEJ-A nrPDB Length = 293 Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust. Identities = 14/33 (42%), Positives = 21/33 (63%) Query: 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIK 33 M+V VIGAG++G A+ I ++ VLQ + K Sbjct: 13 MKVFVIGAGLMGRGIAIAIASKHEVVLQDVSEK 45 >5TUJ-C nrPDB Length = 235 Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 11/79 (13%) Query: 141 GKNYLQWLTERLTERGVKFFQRKVESFEEVAREGADVIVNCTGVWAGALQRDPLLQPGRG 200 G Q E L + ++ F+ E+F+EV AD +V + V A +++P L Sbjct: 130 GTTSEQAAKEFLPKAKIRTFENNAEAFQEVVSGRADAMVTDSPVAAYYAKKNPGL----- 184 Query: 201 QIMKVDAPWMKHFILTHDP 219 ++ VD P+ TH+P Sbjct: 185 AVVVVDEPF------THEP 197 >3MQG-A nrPDB Length = 192 Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust. Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 160 FQRKVESFEEVAREGADVIVNCTGVWAGALQRDPLLQPGRGQIMKVDAP 208 +RK E + + R+GA + NCT V + R + G G ++ D P Sbjct: 94 IERKSEYRDTIVRQGATLGANCTVVCGATIGRYAFV--GAGAVVNKDVP 140 >3DIN-C nrPDB Length = 431 Score = 27.7 bits (60), Expect = 7.2, Method: Compositional matrix adjust. Identities = 11/24 (45%), Positives = 16/24 (66%) Query: 134 HTSLILEGKNYLQWLTERLTERGV 157 T +L G +L WL ER+TE+G+ Sbjct: 160 STMSMLAGTMFLLWLGERITEKGI 183 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1VE9-A nrPDB 640 0.0 3CUK-A nrPDB 640 0.0 1C0L-A nrPDB 472 e-134 Sequences not found previously or not previously below threshold: 1NG3-A nrPDB 45 3e-05 1PJ5-A nrPDB 39 0.002 5A7X-A nrPDB 39 0.004 6C0E-A nrPDB 35 0.051 5M99-B nrPDB 34 0.097 3TPL-A nrPDB 32 0.36 4R16-A nrPDB 32 0.41 2BXR-A nrPDB 31 0.86 5MOG-A nrPDB 31 0.88 4W7G-A nrPDB 31 0.90 2Y0D-A nrPDB 30 1.2 3RP7-A nrPDB 30 1.4 1ZEJ-A nrPDB 30 1.5 5XOY-A nrPDB 30 1.5 3IHG-A nrPDB 30 1.6 2YQU-A nrPDB 30 1.6 3KVE-A nrPDB 30 1.6 1F8S-A nrPDB 30 1.6 4NTC-A nrPDB 30 1.9 3QXB-A nrPDB 30 2.0 3CYM-A nrPDB 30 2.2 1REO-A nrPDB 29 2.7 4B1C-A nrPDB 29 2.8 2D4A-B nrPDB 29 4.6 2CVJ-A nrPDB 28 7.4 >1VE9-A nrPDB Length = 347 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 294/347 (84%), Positives = 321/347 (92%) Query: 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPN 60 MRVVVIGAGVIGLSTALCIHERYHSVLQPLD+KVYADRFTP TTTDVAAGLWQPY S+P+ Sbjct: 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDVKVYADRFTPFTTTDVAAGLWQPYTSEPS 60 Query: 61 NPQEADWSQQTFDYLLSHVHSPNAENLGLFLISGYNLFHEAIPDPSWKDTVLGFRKLTPR 120 NPQEA+W+QQTF+YLLSH+ SPNA N+GL +SGYNLF EA+PDP WKD VLGFRKLTPR Sbjct: 61 NPQEANWNQQTFNYLLSHIGSPNAANMGLTPVSGYNLFREAVPDPYWKDMVLGFRKLTPR 120 Query: 121 ELDMFPDYGYGWFHTSLILEGKNYLQWLTERLTERGVKFFQRKVESFEEVAREGADVIVN 180 ELDMFPDY YGWF+TSLILEG+ YLQWLTERLTERGVKFF RKVESFEEVAR GADVI+N Sbjct: 121 ELDMFPDYRYGWFNTSLILEGRKYLQWLTERLTERGVKFFLRKVESFEEVARGGADVIIN 180 Query: 181 CTGVWAGALQRDPLLQPGRGQIMKVDAPWMKHFILTHDPERGIYNSPYIIPGTQTVTLGG 240 CTGVWAG LQ DPLLQPGRGQI+KVDAPW+K+FI+THD ERGIYNSPYIIPG Q VTLGG Sbjct: 181 CTGVWAGVLQPDPLLQPGRGQIIKVDAPWLKNFIITHDLERGIYNSPYIIPGLQAVTLGG 240 Query: 241 IFQLGNWSELNNIQDHNTIWEGCCRLEPTLKNARIIGERTGFRPVRPQIRLEREQLRTGP 300 FQ+GNW+E+NNIQDHNTIWEGCCRLEPTLK+A+I+GE TGFRPVRPQ+RLEREQLR G Sbjct: 241 TFQVGNWNEINNIQDHNTIWEGCCRLEPTLKDAKIVGEYTGFRPVRPQVRLEREQLRFGS 300 Query: 301 SNTEVIHNYGHGGYGLTIHWGCALEAAKLFGRILEEKKLSRMPPSHL 347 SNTEVIHNYGHGGYGLTIHWGCALE AKLFG++LEE+ L MPPSHL Sbjct: 301 SNTEVIHNYGHGGYGLTIHWGCALEVAKLFGKVLEERNLLTMPPSHL 347 >3CUK-A nrPDB Length = 347 Score = 640 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 347/347 (100%), Positives = 347/347 (100%) Query: 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPN 60 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPN Sbjct: 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPN 60 Query: 61 NPQEADWSQQTFDYLLSHVHSPNAENLGLFLISGYNLFHEAIPDPSWKDTVLGFRKLTPR 120 NPQEADWSQQTFDYLLSHVHSPNAENLGLFLISGYNLFHEAIPDPSWKDTVLGFRKLTPR Sbjct: 61 NPQEADWSQQTFDYLLSHVHSPNAENLGLFLISGYNLFHEAIPDPSWKDTVLGFRKLTPR 120 Query: 121 ELDMFPDYGYGWFHTSLILEGKNYLQWLTERLTERGVKFFQRKVESFEEVAREGADVIVN 180 ELDMFPDYGYGWFHTSLILEGKNYLQWLTERLTERGVKFFQRKVESFEEVAREGADVIVN Sbjct: 121 ELDMFPDYGYGWFHTSLILEGKNYLQWLTERLTERGVKFFQRKVESFEEVAREGADVIVN 180 Query: 181 CTGVWAGALQRDPLLQPGRGQIMKVDAPWMKHFILTHDPERGIYNSPYIIPGTQTVTLGG 240 CTGVWAGALQRDPLLQPGRGQIMKVDAPWMKHFILTHDPERGIYNSPYIIPGTQTVTLGG Sbjct: 181 CTGVWAGALQRDPLLQPGRGQIMKVDAPWMKHFILTHDPERGIYNSPYIIPGTQTVTLGG 240 Query: 241 IFQLGNWSELNNIQDHNTIWEGCCRLEPTLKNARIIGERTGFRPVRPQIRLEREQLRTGP 300 IFQLGNWSELNNIQDHNTIWEGCCRLEPTLKNARIIGERTGFRPVRPQIRLEREQLRTGP Sbjct: 241 IFQLGNWSELNNIQDHNTIWEGCCRLEPTLKNARIIGERTGFRPVRPQIRLEREQLRTGP 300 Query: 301 SNTEVIHNYGHGGYGLTIHWGCALEAAKLFGRILEEKKLSRMPPSHL 347 SNTEVIHNYGHGGYGLTIHWGCALEAAKLFGRILEEKKLSRMPPSHL Sbjct: 301 SNTEVIHNYGHGGYGLTIHWGCALEAAKLFGRILEEKKLSRMPPSHL 347 >1C0L-A nrPDB Length = 363 Score = 472 bits (1215), Expect = e-134, Method: Composition-based stats. Identities = 99/362 (27%), Positives = 159/362 (43%), Gaps = 38/362 (10%) Query: 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPNN 61 RVVV+G+GVIGLS+AL + + +SV L + D + + A W P+++ + Sbjct: 8 RVVVLGSGVIGLSSALILARKGYSV-HILARDLPEDVSSQTFASPWAGANWTPFMTLTDG 66 Query: 62 PQEADWSQQTFDYLLSHVHSPNAENLGLFLISGYNLFHEAIPDPSWKDTVLGFRKLTPRE 121 P++A W + TF + V P + L + + + +KD +R L E Sbjct: 67 PRQAKWEESTFKKWVELV--PTGHAMWLKGTRRFAQNEDGLLGHWYKDITPNYRPLPSSE 124 Query: 122 LDMFPDYGYGWFHTSLILEGKNYLQWLTERLTERGVKFFQRKVESFEEVAREGADVIVNC 181 P G + +L + Y Q+L L + G F +R V S E+ A +GAD++VN Sbjct: 125 C---PPGAIGVTYDTLSVHAPKYCQYLARELQKLGATFERRTVTSLEQ-AFDGADLVVNA 180 Query: 182 TGVWAGALQ--RDPLLQPGRGQIMKVDAPWMKHFILTHDPERGIYNSPYIIPGTQTVTLG 239 TG+ A ++ D +P RGQ + V +P + + + DP Y P PG + V G Sbjct: 181 TGLGAKSIAGIDDQAAEPIRGQTVLVKSPCKRCTMDSSDPASPAYIIPR--PGGE-VICG 237 Query: 240 GIFQLGNWSELNNIQDHNTIWEGCCRLEPTLKN------ARIIGERTGFRPVR---PQIR 290 G + +G+W N + I + C RL+PT+ + ++ G RP R P++ Sbjct: 238 GTYGVGDWDLSVNPETVQRILKHCLRLDPTISSDGTIEGIEVLRHNVGLRPARRGGPRVE 297 Query: 291 LEREQL---RTGP--------------SNTEVIHNYGHGGYGLTIHWGCALEAAKLFGRI 333 ER L RT ++H YG G WG A + A+L Sbjct: 298 AERIVLPLDRTKSPLSLGRGSARAAKEKEVTLVHAYGFSSAGYQQSWGAAEDVAQLVDEA 357 Query: 334 LE 335 + Sbjct: 358 FQ 359 >1NG3-A nrPDB Length = 390 Score = 45.5 bits (106), Expect = 3e-05, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 15/117 (12%) Query: 175 ADVIVNCTGVWAGA----LQRDPLLQPGRGQIMKV---DAPWMKHFILTHDPERGIYNSP 227 A+ +V +GVW+G L + P +G+ + V D P K H Y P Sbjct: 216 ANHVVVASGVWSGMFFKQLGLNNAFLPVKGECLSVWNDDIPLTKTLYHDH-----CYIVP 270 Query: 228 YIIPGTQTVTLGGIFQLGNWSELNNIQDHNTIWEGCCRLEPTLKNARIIGERTGFRP 284 + + +G + G+WSE ++ ++ + + P ++N ++ G RP Sbjct: 271 RK---SGRLVVGATMKPGDWSETPDLGGLESVMKKAKTMLPPIQNMKVDRFWAGLRP 324 >1PJ5-A nrPDB Length = 830 Score = 39.3 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 49/221 (22%) Query: 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPNN 61 R+V+IGAG++G + A + R + + LD P +T A GL + ++P+ Sbjct: 6 RIVIIGAGIVGTNLADELVTRGWNNITVLDQ---GPLNMPGGSTSHAPGL--VFQTNPSK 60 Query: 62 PQEADWSQQTFDYLLSHVHSPNAENLGLFLISGYNL---FHEAIPDPSWKDT--VLGF-- 114 A +++ T + LLS +S +N A + D LG+ Sbjct: 61 TM-ASFAKYTVEKLLSLTED---------GVSCFNQVGGLEVATTETRLADLKRKLGYAA 110 Query: 115 ------RKLTPRELDMFPD--------YGYGWFHTSLILEGKNYLQWLTERLTERGVKFF 160 R L+P E G L + +Q L +R GV + Sbjct: 111 AWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARA-VQLLIKRTESAGVTYR 169 Query: 161 -QRKVESFEEVA--------REG---ADVIVNCTGVWAGAL 189 V E+ +G AD++V+C G W + Sbjct: 170 GSTTVTGIEQSGGRVTGVQTADGVIPADIVVSCAGFWGAKI 210 >5A7X-A nrPDB Length = 313 Score = 38.5 bits (88), Expect = 0.004, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 58/155 (37%), Gaps = 15/155 (9%) Query: 177 VIVNCTGVWAGALQRDPLLQPGRGQIMKVDAPWMKHFILTHDPERGIYNSPYIIPGTQTV 236 V++NCTG L + +K+ + + + +P G P I+ T + Sbjct: 150 VVINCTGAGHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSG--GDPEIV--THSF 205 Query: 237 TLGGIF------QLGNWSELNNIQDHNTIWEGCCRLEPTLKNARIIGERTGFRPVRPQIR 290 GG F QL W++ + + CR++ + + +G+ P+R QIR Sbjct: 206 NCGGEFFYCNSTQLFTWNDTRKLNNTGRNITLPCRIKQIINMWQEVGKAMYAPPIRGQIR 265 Query: 291 LEREQ-----LRTGPSNTEVIHNYGHGGYGLTIHW 320 R G +T + GG + +W Sbjct: 266 CSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNW 300 >6C0E-A nrPDB Length = 419 Score = 35.1 bits (79), Expect = 0.051, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 64/171 (37%), Gaps = 23/171 (13%) Query: 89 LFLISGYNLFHEAIPDPSWKDTVLGFRKLTPRELDMFPDYGYGWFHTSLILEGKNYLQWL 148 L I +N + +P D V+ FR+ E D++ G W + E K +Q+L Sbjct: 131 LRPIRYFNGVPSPVREPWKTDMVI-FRE--NSE-DIY--AGIEWQADT--PEAKKVIQFL 182 Query: 149 TERLTERGVKFFQRKVESFEEVAREGADVIVNCTGVWAGALQRDPLLQPGRGQIMKVDAP 208 T+ + + ++F + + V+REG +V +A R + +G IMK Sbjct: 183 TKEMGVKKIRFPEHCGIGVKPVSREGTTRLVKAAIQYAIDNDRSTVTLVHKGNIMKFTEG 242 Query: 209 WMKHFILTHDPERGIYNSPYIIPGTQTVTLGGIFQLGNWSELNNIQDHNTI 259 K + Y G + +Q G W E N + I Sbjct: 243 AFKDW---------GYQVARDSFGAKE------YQGGPWMEFKNPKTGKQI 278 >5M99-B nrPDB Length = 505 Score = 33.9 bits (76), Expect = 0.097, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 47/148 (31%), Gaps = 34/148 (22%) Query: 18 CIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPY-----LSDPNNPQEADWSQQTF 72 +HE V+ L I +D P V PY +S ++ + W + Sbjct: 82 VLHENGIKVIMDLVINHTSDEH-PWFKDAVENTTSSPYWDYYIMSLEDHSGQDHWHWKIN 140 Query: 73 DYLLSHVHSPNAENLGLFLISGYN---LFHEA---------IPDPSWKDTVLGFRKLTPR 120 + + F + GYN L H++ I D V GFR + Sbjct: 141 SK---------GQKVWYFGLFGYNMPDLNHDSQKVREEVKKIVDFWISKGVDGFRIDAAK 191 Query: 121 ELDMFPDYGYGWFHTSLILEGKNYLQWL 148 + YGW I E Y +W Sbjct: 192 HI-------YGWSWDDGIQESAEYFEWF 212 >3TPL-A nrPDB Length = 433 Score = 32.0 bits (71), Expect = 0.36, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 40/139 (28%), Gaps = 37/139 (26%) Query: 11 IGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPNNP-------- 62 +G + +H Y L + + P T A L +S P+ P Sbjct: 80 VGAAPHPFLHRYYQRQLSSTYRDLRKGVYVPYTQGAWAGELGTDLVSIPHGPNVTVRANI 139 Query: 63 -----------QEADWS-----------------QQTFDYLLSHVHSPNAENLGLFLISG 94 ++W + FD L+ H PN +L L +G Sbjct: 140 AAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCG-AG 198 Query: 95 YNLFHEAIPDPSWKDTVLG 113 + L + ++G Sbjct: 199 FPLNQSEVLASVGGSMIIG 217 >4R16-A nrPDB Length = 418 Score = 32.0 bits (71), Expect = 0.41, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 16/27 (59%) Query: 1 MRVVVIGAGVIGLSTALCIHERYHSVL 27 MR+ V+G G IGL TA+ + V+ Sbjct: 1 MRIAVLGLGYIGLPTAIMFASSGYDVV 27 >2BXR-A nrPDB Length = 527 Score = 30.8 bits (68), Expect = 0.86, Method: Composition-based stats. Identities = 14/31 (45%), Positives = 16/31 (51%) Query: 3 VVVIGAGVIGLSTALCIHERYHSVLQPLDIK 33 VVVIG G+ GLS A + E SVL Sbjct: 16 VVVIGGGISGLSAAKLLTEYGVSVLVLEARD 46 >5MOG-A nrPDB Length = 497 Score = 30.8 bits (68), Expect = 0.88, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKV 34 ++VV+ GAG+ GLSTA + + H + V Sbjct: 18 LQVVIAGAGLAGLSTAKYLADAGHKPILLEARDV 51 >4W7G-A nrPDB Length = 552 Score = 30.8 bits (68), Expect = 0.90, Method: Composition-based stats. Identities = 37/155 (23%), Positives = 58/155 (37%), Gaps = 11/155 (7%) Query: 83 NAENLGLFLISGYNLFHEAIPDPSWKDTVLGFRKLTPRELDMFPDYGYGWFHTSLILEGK 142 N E+ + G L EA+PDP VL + +D G T L +E Sbjct: 361 NGEDGQINGEDGSTLVEEALPDPEGSTVVLYEEAVQDPTMDALQLAGRNTHSTHLEVETI 420 Query: 143 NYLQWLTERLTERGVKFFQRKVESFEEVAREGADVIVNCTGVWAGALQRDPLLQP-GRGQ 201 + +L ++L Q++ ES E AR A V+ G + D +P G+ Sbjct: 421 DTQAFLAQQLKVLEA-LRQKEEESSRESARRKAHKKVDDDRHLVGGIGDDTGRRPTVEGK 479 Query: 202 IMKVDAPWMKHF----ILTHDP-----ERGIYNSP 227 +++ P + + D ER Y SP Sbjct: 480 VLEHIGPVQFNMGGIQVDADDMVQRLKERQAYGSP 514 >2Y0D-A nrPDB Length = 478 Score = 30.4 bits (67), Expect = 1.2, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Query: 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIK 33 M + +IG+G +GL T C+ + H V LD+ Sbjct: 9 MNLTIIGSGKVGLVTGACLADIGHDVF-CLDVD 40 >3RP7-A nrPDB Length = 407 Score = 30.1 bits (66), Expect = 1.4, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 26/157 (16%) Query: 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQ------- 53 M+ +VIGAG+ GLS A+ + + +D VY + A +W Sbjct: 24 MKAIVIGAGIGGLSAAVALKQSG------IDCDVYEAV-KEIKPVGAAISVWPNGVKCMA 76 Query: 54 -----PYLSDPNNP--QEADWSQQTFDYLLSHVHSPNAENLGLF--LISGYNLFHEAIPD 104 + P + A ++ + + +P E G +S L E + D Sbjct: 77 HLGMGDIMETFGGPLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQRE-MLD 135 Query: 105 PSWKDTVLGFRKLTPRELDMFPDYGYGWFHTSLILEG 141 +D+V +++T + D WF G Sbjct: 136 YWGRDSVQFGKRVT--RCEEDADGVTVWFTDGSSASG 170 >1ZEJ-A nrPDB Length = 293 Score = 30.1 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 21/36 (58%) Query: 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYA 36 M+V VIGAG++G A+ I ++ VLQ + K Sbjct: 13 MKVFVIGAGLMGRGIAIAIASKHEVVLQDVSEKALE 48 >5XOY-A nrPDB Length = 373 Score = 30.1 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 5/49 (10%) Query: 264 CRLEPTLKNARIIGERTGFRPVRPQIRLE---REQLRTGPSNTEVIHNY 309 RL P L I T + P P I LE RE GP +T + + Sbjct: 247 LRLPPRLPPEEAIRHLTAYAP--PTIELEFFGREVPYQGPKDTPLTRAF 293 >3IHG-A nrPDB Length = 535 Score = 30.1 bits (66), Expect = 1.6, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 18/25 (72%) Query: 3 VVVIGAGVIGLSTALCIHERYHSVL 27 V+V+GAG+ GLSTA+ + + VL Sbjct: 8 VLVVGAGLGGLSTAMFLARQGVRVL 32 >2YQU-A nrPDB Length = 455 Score = 30.1 bits (66), Expect = 1.6, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Query: 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAG 50 R++V+G GVIGL + H V+ + Y DR P +V+ Sbjct: 169 RLIVVGGGVIGLELGVVWHRLGAEVI----VLEYMDRILPTMDLEVSRA 213 >3KVE-A nrPDB Length = 486 Score = 30.1 bits (66), Expect = 1.6, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 15/24 (62%) Query: 3 VVVIGAGVIGLSTALCIHERYHSV 26 VVV+GAG+ GLS A + H V Sbjct: 36 VVVVGAGMSGLSAAYVLAGAGHKV 59 >1F8S-A nrPDB Length = 498 Score = 30.1 bits (66), Expect = 1.6, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 17/36 (47%) Query: 3 VVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADR 38 VV++GAG+ GLS A + H V + R Sbjct: 36 VVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGR 71 >4NTC-A nrPDB Length = 335 Score = 29.7 bits (65), Expect = 1.9, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Query: 3 VVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTP 41 V++IGAG GLSTA + + H+ + D VY + T Sbjct: 17 VLIIGAGPAGLSTATGLARQLHTAV-VFDSGVYRNAKTQ 54 >3QXB-A nrPDB Length = 316 Score = 29.7 bits (65), Expect = 2.0, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 34/109 (31%), Gaps = 7/109 (6%) Query: 95 YNLFHEAIPDPSWKDTVLGFRKLTPRELDMFPDYGYGWFHTSLILEGKNYLQWLTERLTE 154 Y + + DP W D R + + L N+ T L Sbjct: 51 YVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIESTFGGLASYTYNHFLAPTLELQS 110 Query: 155 RGVKFFQRKVESFEEVAREGADVIVNCTGVWAGALQRDPLLQPGRGQIM 203 G + +R ++ A + V TG+ G+ L P R + + Sbjct: 111 LGYQHLKRAIDM-------TAAMEVPATGMPFGSYSAADALNPARREEI 152 >3CYM-A nrPDB Length = 440 Score = 29.7 bits (65), Expect = 2.2, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 29/92 (31%), Gaps = 3/92 (3%) Query: 90 FLISGYNLFHEAIPDPSWKDTVLGFRKLTPRELDMFPDYGYGWFHTSLILEGKNYLQWLT 149 + Y I WK+ + L P E D G H S ++ Sbjct: 298 KMFERYAPIQRKIKPSMWKNIIQDALALPPSEWPDV-DGGAARRHESQSASAPKSIRVWK 356 Query: 150 ERLTERGVKF--FQRKVESFEEVAREGADVIV 179 ER ER ++ V E R ++++ Sbjct: 357 ERYPERLQVLNRVRKAVSQIAEDTRTPVEIVI 388 >1REO-A nrPDB Length = 486 Score = 29.3 bits (64), Expect = 2.7, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 15/24 (62%) Query: 3 VVVIGAGVIGLSTALCIHERYHSV 26 VVV+GAG+ GLS A + H V Sbjct: 36 VVVVGAGMSGLSAAYVLSGAGHQV 59 >4B1C-A nrPDB Length = 375 Score = 29.3 bits (64), Expect = 2.8, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 17/52 (32%) Query: 11 IGLSTALCIHERYHSVLQPLDIKVYADRFTPLTTTDVAAGLWQPYLSDPNNP 62 +G + +H Y L + + P T L +S P+ P Sbjct: 46 VGAAPHPFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGELGTDLVSIPHGP 97 >2D4A-B nrPDB Length = 308 Score = 28.5 bits (62), Expect = 4.6, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 18/30 (60%) Query: 3 VVVIGAGVIGLSTALCIHERYHSVLQPLDI 32 + ++GAG +G++TA+ + R + L + Sbjct: 2 ITILGAGKVGMATAVMLMMRGYDDLLLIAR 31 >2CVJ-A nrPDB Length = 180 Score = 27.7 bits (60), Expect = 7.4, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 14/25 (56%) Query: 3 VVVIGAGVIGLSTALCIHERYHSVL 27 V+V+G G GLS AL + VL Sbjct: 4 VIVVGGGPSGLSAALFLARAGLKVL 28 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.132 0.381 Lambda K H 0.267 0.0402 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,538,521 Number of Sequences: 36641 Number of extensions: 598747 Number of successful extensions: 1947 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 21 Number of HSP's that attempted gapping in prelim test: 1902 Number of HSP's gapped (non-prelim): 50 length of query: 347 length of database: 10,336,785 effective HSP length: 98 effective length of query: 249 effective length of database: 6,745,967 effective search space: 1679745783 effective search space used: 1679745783 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 59 (27.4 bits)