BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P14906 (663 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6N3Q-D nrPDB 1367 0.0 5AYL-A nrPDB 59 7e-09 3APQ-A nrPDB 59 9e-09 4WB7-A nrPDB 54 2e-07 4J80-A nrPDB 46 7e-05 3LZ8-A nrPDB 44 3e-04 2L6L-A nrPDB 41 0.002 2Y4T-A nrPDB 39 0.005 4IT5-A nrPDB 38 0.017 1FPO-A nrPDB 34 0.16 5Y88-T nrPDB 33 0.44 2IF2-A nrPDB 30 3.3 2BIF-A nrPDB 30 3.4 5T0C-AD nrPDB 30 3.7 4GO4-A nrPDB 30 4.2 6DXA-A nrPDB 30 4.2 3UO2-A nrPDB 30 5.0 5WVI-K nrPDB 29 7.4 >6N3Q-D nrPDB Length = 663 Score = 1367 bits (3537), Expect = 0.0, Method: Compositional matrix adjust. Identities = 663/663 (100%), Positives = 663/663 (100%) Query: 1 MPTNYEYDEASETWPSFILTGLLMVVGPMTLLQIYQIFFGANAEDGNSGKSKEFNEEVFK 60 MPTNYEYDEASETWPSFILTGLLMVVGPMTLLQIYQIFFGANAEDGNSGKSKEFNEEVFK Sbjct: 1 MPTNYEYDEASETWPSFILTGLLMVVGPMTLLQIYQIFFGANAEDGNSGKSKEFNEEVFK 60 Query: 61 NLNEEYTSDEIKQFRRKFDKNSNKKSKIWSRRNIIIIVGWILVAILLQRINSNDAIKDAA 120 NLNEEYTSDEIKQFRRKFDKNSNKKSKIWSRRNIIIIVGWILVAILLQRINSNDAIKDAA Sbjct: 61 NLNEEYTSDEIKQFRRKFDKNSNKKSKIWSRRNIIIIVGWILVAILLQRINSNDAIKDAA 120 Query: 121 TKLFDPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAY 180 TKLFDPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAY Sbjct: 121 TKLFDPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAY 180 Query: 181 ESLTDELVRQNYLKYGHPDGPQSTSHGIALPRFLVDGSASPLLVVCYVALLGLILPYFVS 240 ESLTDELVRQNYLKYGHPDGPQSTSHGIALPRFLVDGSASPLLVVCYVALLGLILPYFVS Sbjct: 181 ESLTDELVRQNYLKYGHPDGPQSTSHGIALPRFLVDGSASPLLVVCYVALLGLILPYFVS 240 Query: 241 RWWARTQSYTKKGIHNVTASNFVSNLVNYKPSEIVTTDLILHWLSFAHEFKQFFPDLQPT 300 RWWARTQSYTKKGIHNVTASNFVSNLVNYKPSEIVTTDLILHWLSFAHEFKQFFPDLQPT Sbjct: 241 RWWARTQSYTKKGIHNVTASNFVSNLVNYKPSEIVTTDLILHWLSFAHEFKQFFPDLQPT 300 Query: 301 DFEKLLQDHINRRDSGKLNNAKFRIVAKCHSLLHGLLDIACGFRNLDIALGAINTFKCIV 360 DFEKLLQDHINRRDSGKLNNAKFRIVAKCHSLLHGLLDIACGFRNLDIALGAINTFKCIV Sbjct: 301 DFEKLLQDHINRRDSGKLNNAKFRIVAKCHSLLHGLLDIACGFRNLDIALGAINTFKCIV 360 Query: 361 QAVPLTPNCQILQLPNVDKEHFITKTGDIHTLGKLFTLEDAKIGEVLGIKDQAKLNETLR 420 QAVPLTPNCQILQLPNVDKEHFITKTGDIHTLGKLFTLEDAKIGEVLGIKDQAKLNETLR Sbjct: 361 QAVPLTPNCQILQLPNVDKEHFITKTGDIHTLGKLFTLEDAKIGEVLGIKDQAKLNETLR 420 Query: 421 VASHIPNLKIIKADFLVPGENQVTPSSTPYISLKVLVRSAKQPLIPTSLIPEENLTEPQD 480 VASHIPNLKIIKADFLVPGENQVTPSSTPYISLKVLVRSAKQPLIPTSLIPEENLTEPQD Sbjct: 421 VASHIPNLKIIKADFLVPGENQVTPSSTPYISLKVLVRSAKQPLIPTSLIPEENLTEPQD 480 Query: 481 FESQRDPFAMMSKQPLVPYSFAPFFPTKRRGSWCCLVSSQKDGKILQTPIIIEKLSYKNL 540 FESQRDPFAMMSKQPLVPYSFAPFFPTKRRGSWCCLVSSQKDGKILQTPIIIEKLSYKNL Sbjct: 481 FESQRDPFAMMSKQPLVPYSFAPFFPTKRRGSWCCLVSSQKDGKILQTPIIIEKLSYKNL 540 Query: 541 NDDKDFFDKRIKMDLTKHEKFDINDWEIGTIKIPLGQPAPETVGDFFFRVIVKSTDYFTT 600 NDDKDFFDKRIKMDLTKHEKFDINDWEIGTIKIPLGQPAPETVGDFFFRVIVKSTDYFTT Sbjct: 541 NDDKDFFDKRIKMDLTKHEKFDINDWEIGTIKIPLGQPAPETVGDFFFRVIVKSTDYFTT 600 Query: 601 DLDITMNMKVRDSPAVEQVEVYSEEDDEYSTDDDETESDDESDASDYTDIDTDTEAEDDE 660 DLDITMNMKVRDSPAVEQVEVYSEEDDEYSTDDDETESDDESDASDYTDIDTDTEAEDDE Sbjct: 601 DLDITMNMKVRDSPAVEQVEVYSEEDDEYSTDDDETESDDESDASDYTDIDTDTEAEDDE 660 Query: 661 SPE 663 SPE Sbjct: 661 SPE 663 >5AYL-A nrPDB Length = 783 Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 29/70 (41%), Positives = 47/70 (67%), Gaps = 6/70 (8%) Query: 127 YEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYESLTDE 186 Y +LG+S +AS R+I+ A++KL++K HPDK P+ + + +++I +AYE L DE Sbjct: 27 YSLLGVSKTASSREIRQAFKKLALKLHPDK-----NPNNPNAHGD-FLKINRAYEVLKDE 80 Query: 187 LVRQNYLKYG 196 +R+ Y KYG Sbjct: 81 DLRKKYDKYG 90 >3APQ-A nrPDB Length = 210 Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 29/70 (41%), Positives = 47/70 (67%), Gaps = 6/70 (8%) Query: 127 YEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYESLTDE 186 Y +LG+S +AS R+I+ A++KL++K HPDK P+ + + +++I +AYE L DE Sbjct: 5 YSLLGVSKTASSREIRQAFKKLALKLHPDK-----NPNNPNAHGD-FLKINRAYEVLKDE 58 Query: 187 LVRQNYLKYG 196 +R+ Y KYG Sbjct: 59 DLRKKYDKYG 68 >4WB7-A nrPDB Length = 405 Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 7/72 (9%) Query: 125 DPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYESLT 184 D Y+ LG++ ASD +IK AYR+ ++++HPDK +++ EE + +I +AY+ L+ Sbjct: 3 DYYQTLGLARGASDEEIKRAYRRQALRYHPDK-------NKEPGAEEKFKEIAEAYDVLS 55 Query: 185 DELVRQNYLKYG 196 D R+ + +YG Sbjct: 56 DPRKREIFDRYG 67 >4J80-A nrPDB Length = 284 Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 7/72 (9%) Query: 125 DPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYESLT 184 D Y ILG+ +A+ +IK AY++L+ ++HPD ++ EE + +I +AY ++ Sbjct: 6 DYYAILGVPRNATQEEIKRAYKRLARQYHPDV-------NKSPEAEEKFKEINEAYAVMS 58 Query: 185 DELVRQNYLKYG 196 D R+ Y YG Sbjct: 59 DPEKRRIYDTYG 70 >3LZ8-A nrPDB Length = 329 Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 7/73 (9%) Query: 120 ATKLFDPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKA 179 A +L D Y ILG+ + + IK+AYR+L+ K+HPD +++ E + + +A Sbjct: 24 AMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDV-------SKENDAEAKFKDLAEA 76 Query: 180 YESLTDELVRQNY 192 +E L DE R Y Sbjct: 77 WEVLKDEQRRAEY 89 >2L6L-A nrPDB Length = 155 Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 38/68 (55%) Query: 125 DPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYESLT 184 D Y ILG SA+ D+K Y+KL + +HPDK + + + +++I +A++ L Sbjct: 11 DWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILG 70 Query: 185 DELVRQNY 192 +E ++ Y Sbjct: 71 NEETKREY 78 >2Y4T-A nrPDB Length = 450 Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 3/68 (4%) Query: 125 DPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYESLT 184 D Y+ILG+ +A ++I AYRKL++++HPD +EK E+ ++ I A E L+ Sbjct: 383 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQ---NEEEKKKAEKKFIDIAAAKEVLS 439 Query: 185 DELVRQNY 192 D +R+ + Sbjct: 440 DPEMRKKF 447 >4IT5-A nrPDB Length = 174 Score = 37.7 bits (86), Expect = 0.017, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 141 IKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYESLTDELVRQNYL 193 + S +R L +FHPD A D +++ QI AY++L D L R YL Sbjct: 23 LSSQFRALQKRFHPDNFATASERDRLMAVQQA-AQINDAYQTLKDPLRRAEYL 74 >1FPO-A nrPDB Length = 171 Score = 34.3 bits (77), Expect = 0.16, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 1/72 (1%) Query: 145 YRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYESLTDELVRQNYLKYGHPDGPQST 204 ++ L ++HPDK A G ++ + ++++ I +A+++L L+R YL H S Sbjct: 24 FQDLQRQYHPDKFASGSQAEQLAAVQQS-ATINQAWQTLRHPLMRAEYLLSLHGFDLASE 82 Query: 205 SHGIALPRFLVD 216 H + FL++ Sbjct: 83 QHTVRDTAFLME 94 >5Y88-T nrPDB Length = 283 Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 6/55 (10%) Query: 141 IKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYESLTDELVRQNYLKY 195 IK YR L++K+HPDK PD S++ + ++ ++ A LT+ VR +Y ++ Sbjct: 38 IKRKYRTLALKYHPDK-----HPDNPSIIHKFHL-LSTATNILTNADVRPHYDRW 86 >2IF2-A nrPDB Length = 204 Score = 30.0 bits (66), Expect = 3.3, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 13/144 (9%) Query: 44 EDGNSGKSKEFNEEVFKNLNEEYTSDEIKQFRRKFDKNSNKKSKIWSRRNIIIIVGWILV 103 E+GN + K+ + VFK+ + +EI R K K +K S + I+ +LV Sbjct: 60 EEGNIDR-KKLADIVFKDEEKLRKLEEITH--RALYKEIEKITKNLSEDTLFILEASLLV 116 Query: 104 AILLQRINSNDAIKDAATKLFDPYEIL---GISTSASDRDIKSAYRKLSVKFHPDKLAKG 160 D ++ PYE+ I S+ D + ++K K A Sbjct: 117 E------KGTYKNYDKLIVVYAPYEVCKERAIKRGMSEEDFERRWKKQMPIEEKVKYADY 170 Query: 161 LTPDEKSVMEETYVQITKAYESLT 184 + + S+ EETY Q+ K YE LT Sbjct: 171 VIDNSGSI-EETYKQVKKVYEELT 193 >2BIF-A nrPDB Length = 469 Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 8/130 (6%) Query: 130 LGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEE-TYVQITKAYESLTDELV 188 L + TS R I++A LSV P + K L + V EE TY +I Y L L Sbjct: 297 LKVFTSQMKRTIQTA-EALSV---PYEQFKVLNEIDAGVCEEMTYEEIQDHY-PLEFALR 351 Query: 189 RQNYLKYGHPDGPQSTSHGIAL-PRFLVDGSASPLLVVCYVALLGLILPYFVSRWWARTQ 247 Q+ +Y +P G L P + +LV+C+ A++ +L YF+ + A Sbjct: 352 DQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDK-AAEEL 410 Query: 248 SYTKKGIHNV 257 Y K +H V Sbjct: 411 PYLKCPLHTV 420 >5T0C-AD nrPDB Length = 418 Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 15/133 (11%) Query: 38 FFGANAEDGNS--GKSKEFNEEV-FKNLNEEYTSDEIKQFRRKFDKNSNKKSKIWSRRNI 94 F G ED + K+ +E+ F + EEY DE K +++F + +I S I Sbjct: 29 FLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQS---I 85 Query: 95 IIIVGWILVAILLQRINSNDAIKDAATKLFDPYEILGISTSASDRDIKSAYRKLSVKFHP 154 +++G L A ++ N AI + T IL S DR++ +++ H Sbjct: 86 PLVIGQFLEA-----VDQNTAIVGSTTGSNYYVRIL----STIDRELLKPNASVALHKHS 136 Query: 155 DKLAKGLTPDEKS 167 + L L P+ S Sbjct: 137 NALVDVLPPEADS 149 >4GO4-A nrPDB Length = 495 Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 28/54 (51%) Query: 124 FDPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQIT 177 DP +G TSA RD +Y ++++ LA G PD+K++ YV+ T Sbjct: 314 MDPETEMGPLTSALRRDRVLSYIDIAIEQGGKVLAGGKAPDDKALANGFYVEPT 367 >6DXA-A nrPDB Length = 396 Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 6/69 (8%) Query: 27 GPMTLLQIYQIFFGANAEDGNSGKSKEFNEEVFKNLNEEYTSDEIKQFRRKFDKNSNKKS 86 GP T+L I A N+ + + FK N E+ ++ ++FRR DK++ KK Sbjct: 20 GPATILAI------GTATPPNAVDQSSYPDYYFKITNSEHMTELKEKFRRMCDKSAIKKR 73 Query: 87 KIWSRRNII 95 ++ I+ Sbjct: 74 YMYLTEEIL 82 >3UO2-A nrPDB Length = 175 Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust. Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 9/53 (16%) Query: 141 IKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYESLTDELVRQNYL 193 ++ YR+L + HPD +G E + +AY +L D L R Y+ Sbjct: 27 LRKEYRQLQAQHHPDMAQQG---------SEQSSTLNQAYHTLKDPLRRSQYM 70 >5WVI-K nrPDB Length = 428 Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust. Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 12/106 (11%) Query: 62 LNEEYTSDEIKQFRRKFDKNSNKKSKIWSRRNIIIIVGWILVAILLQRINSNDAIKDAAT 121 L E+Y DE + +R+ + + +I S + +++G L+ I+ N I + T Sbjct: 63 LQEDYIKDEQRHLKRELKRAQEEVKRIQS---VPLVIGQ-----FLEPIDQNTGIVSSTT 114 Query: 122 KLFDPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKS 167 + IL S DR++ +++ H + L L PD S Sbjct: 115 GMSYVVRIL----STLDRELLKPSMSVALHRHSNALVDILPPDSDS 156 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6N3Q-D nrPDB 1372 0.0 2L6L-A nrPDB 106 3e-23 4J80-A nrPDB 102 4e-22 4WB7-A nrPDB 100 1e-21 3LZ8-A nrPDB 100 2e-21 3APQ-A nrPDB 92 9e-19 5AYL-A nrPDB 91 1e-18 Sequences not found previously or not previously below threshold: 2Y4T-A nrPDB 66 4e-11 1FPO-A nrPDB 48 1e-05 5Y88-T nrPDB 47 3e-05 4IT5-A nrPDB 44 3e-04 3UO2-A nrPDB 38 0.016 5T0C-AD nrPDB 34 0.19 2PF4-E nrPDB 34 0.26 3BVO-A nrPDB 33 0.27 1QU3-A nrPDB 33 0.42 5VGZ-D nrPDB 32 0.73 3CLR-C nrPDB 32 0.82 6FAI-l nrPDB 31 2.2 6DXA-A nrPDB 30 2.6 4F4Z-B nrPDB 30 3.1 2UVV-A nrPDB 30 3.1 3VE1-A nrPDB 29 5.7 2IF2-A nrPDB 29 6.2 6GMH-V nrPDB 28 9.6 >6N3Q-D nrPDB Length = 663 Score = 1372 bits (3552), Expect = 0.0, Method: Composition-based stats. Identities = 663/663 (100%), Positives = 663/663 (100%) Query: 1 MPTNYEYDEASETWPSFILTGLLMVVGPMTLLQIYQIFFGANAEDGNSGKSKEFNEEVFK 60 MPTNYEYDEASETWPSFILTGLLMVVGPMTLLQIYQIFFGANAEDGNSGKSKEFNEEVFK Sbjct: 1 MPTNYEYDEASETWPSFILTGLLMVVGPMTLLQIYQIFFGANAEDGNSGKSKEFNEEVFK 60 Query: 61 NLNEEYTSDEIKQFRRKFDKNSNKKSKIWSRRNIIIIVGWILVAILLQRINSNDAIKDAA 120 NLNEEYTSDEIKQFRRKFDKNSNKKSKIWSRRNIIIIVGWILVAILLQRINSNDAIKDAA Sbjct: 61 NLNEEYTSDEIKQFRRKFDKNSNKKSKIWSRRNIIIIVGWILVAILLQRINSNDAIKDAA 120 Query: 121 TKLFDPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAY 180 TKLFDPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAY Sbjct: 121 TKLFDPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAY 180 Query: 181 ESLTDELVRQNYLKYGHPDGPQSTSHGIALPRFLVDGSASPLLVVCYVALLGLILPYFVS 240 ESLTDELVRQNYLKYGHPDGPQSTSHGIALPRFLVDGSASPLLVVCYVALLGLILPYFVS Sbjct: 181 ESLTDELVRQNYLKYGHPDGPQSTSHGIALPRFLVDGSASPLLVVCYVALLGLILPYFVS 240 Query: 241 RWWARTQSYTKKGIHNVTASNFVSNLVNYKPSEIVTTDLILHWLSFAHEFKQFFPDLQPT 300 RWWARTQSYTKKGIHNVTASNFVSNLVNYKPSEIVTTDLILHWLSFAHEFKQFFPDLQPT Sbjct: 241 RWWARTQSYTKKGIHNVTASNFVSNLVNYKPSEIVTTDLILHWLSFAHEFKQFFPDLQPT 300 Query: 301 DFEKLLQDHINRRDSGKLNNAKFRIVAKCHSLLHGLLDIACGFRNLDIALGAINTFKCIV 360 DFEKLLQDHINRRDSGKLNNAKFRIVAKCHSLLHGLLDIACGFRNLDIALGAINTFKCIV Sbjct: 301 DFEKLLQDHINRRDSGKLNNAKFRIVAKCHSLLHGLLDIACGFRNLDIALGAINTFKCIV 360 Query: 361 QAVPLTPNCQILQLPNVDKEHFITKTGDIHTLGKLFTLEDAKIGEVLGIKDQAKLNETLR 420 QAVPLTPNCQILQLPNVDKEHFITKTGDIHTLGKLFTLEDAKIGEVLGIKDQAKLNETLR Sbjct: 361 QAVPLTPNCQILQLPNVDKEHFITKTGDIHTLGKLFTLEDAKIGEVLGIKDQAKLNETLR 420 Query: 421 VASHIPNLKIIKADFLVPGENQVTPSSTPYISLKVLVRSAKQPLIPTSLIPEENLTEPQD 480 VASHIPNLKIIKADFLVPGENQVTPSSTPYISLKVLVRSAKQPLIPTSLIPEENLTEPQD Sbjct: 421 VASHIPNLKIIKADFLVPGENQVTPSSTPYISLKVLVRSAKQPLIPTSLIPEENLTEPQD 480 Query: 481 FESQRDPFAMMSKQPLVPYSFAPFFPTKRRGSWCCLVSSQKDGKILQTPIIIEKLSYKNL 540 FESQRDPFAMMSKQPLVPYSFAPFFPTKRRGSWCCLVSSQKDGKILQTPIIIEKLSYKNL Sbjct: 481 FESQRDPFAMMSKQPLVPYSFAPFFPTKRRGSWCCLVSSQKDGKILQTPIIIEKLSYKNL 540 Query: 541 NDDKDFFDKRIKMDLTKHEKFDINDWEIGTIKIPLGQPAPETVGDFFFRVIVKSTDYFTT 600 NDDKDFFDKRIKMDLTKHEKFDINDWEIGTIKIPLGQPAPETVGDFFFRVIVKSTDYFTT Sbjct: 541 NDDKDFFDKRIKMDLTKHEKFDINDWEIGTIKIPLGQPAPETVGDFFFRVIVKSTDYFTT 600 Query: 601 DLDITMNMKVRDSPAVEQVEVYSEEDDEYSTDDDETESDDESDASDYTDIDTDTEAEDDE 660 DLDITMNMKVRDSPAVEQVEVYSEEDDEYSTDDDETESDDESDASDYTDIDTDTEAEDDE Sbjct: 601 DLDITMNMKVRDSPAVEQVEVYSEEDDEYSTDDDETESDDESDASDYTDIDTDTEAEDDE 660 Query: 661 SPE 663 SPE Sbjct: 661 SPE 663 >2L6L-A nrPDB Length = 155 Score = 106 bits (265), Expect = 3e-23, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 38/73 (52%) Query: 121 TKLFDPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAY 180 D Y ILG SA+ D+K Y+KL + +HPDK + + + +++I +A+ Sbjct: 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAW 66 Query: 181 ESLTDELVRQNYL 193 + L +E ++ Y Sbjct: 67 KILGNEETKREYD 79 >4J80-A nrPDB Length = 284 Score = 102 bits (255), Expect = 4e-22, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 7/73 (9%) Query: 124 FDPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYESL 183 D Y ILG+ +A+ +IK AY++L+ ++HPD ++ EE + +I +AY + Sbjct: 5 KDYYAILGVPRNATQEEIKRAYKRLARQYHPDV-------NKSPEAEEKFKEINEAYAVM 57 Query: 184 TDELVRQNYLKYG 196 +D R+ Y YG Sbjct: 58 SDPEKRRIYDTYG 70 >4WB7-A nrPDB Length = 405 Score = 100 bits (250), Expect = 1e-21, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 7/73 (9%) Query: 124 FDPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYESL 183 D Y+ LG++ ASD +IK AYR+ ++++HPDK +++ EE + +I +AY+ L Sbjct: 2 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDK-------NKEPGAEEKFKEIAEAYDVL 54 Query: 184 TDELVRQNYLKYG 196 +D R+ + +YG Sbjct: 55 SDPRKREIFDRYG 67 >3LZ8-A nrPDB Length = 329 Score = 100 bits (249), Expect = 2e-21, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 8/83 (9%) Query: 120 ATKLFDPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKA 179 A +L D Y ILG+ + + IK+AYR+L+ K+HPD +++ E + + +A Sbjct: 24 AMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDV-------SKENDAEAKFKDLAEA 76 Query: 180 YESLTDELVRQNYLK-YGHPDGP 201 +E L DE R Y + + H + P Sbjct: 77 WEVLKDEQRRAEYDQLWQHRNDP 99 >3APQ-A nrPDB Length = 210 Score = 91.7 bits (226), Expect = 9e-19, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 6/74 (8%) Query: 123 LFDPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYES 182 + + Y +LG+S +AS R+I+ A++KL++K HPDK P+ + + +++I +AYE Sbjct: 1 IQNFYSLLGVSKTASSREIRQAFKKLALKLHPDK-----NPNNPNAHGD-FLKINRAYEV 54 Query: 183 LTDELVRQNYLKYG 196 L DE +R+ Y KYG Sbjct: 55 LKDEDLRKKYDKYG 68 >5AYL-A nrPDB Length = 783 Score = 91.3 bits (225), Expect = 1e-18, Method: Composition-based stats. Identities = 29/72 (40%), Positives = 48/72 (66%), Gaps = 6/72 (8%) Query: 125 DPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYESLT 184 + Y +LG+S +AS R+I+ A++KL++K HPDK P+ + + +++I +AYE L Sbjct: 25 NFYSLLGVSKTASSREIRQAFKKLALKLHPDK-----NPNNPNAHGD-FLKINRAYEVLK 78 Query: 185 DELVRQNYLKYG 196 DE +R+ Y KYG Sbjct: 79 DEDLRKKYDKYG 90 >2Y4T-A nrPDB Length = 450 Score = 66.2 bits (160), Expect = 4e-11, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 3/70 (4%) Query: 124 FDPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYESL 183 D Y+ILG+ +A ++I AYRKL++++HPD +EK E+ ++ I A E L Sbjct: 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQ---NEEEKKKAEKKFIDIAAAKEVL 438 Query: 184 TDELVRQNYL 193 +D +R+ + Sbjct: 439 SDPEMRKKFD 448 >1FPO-A nrPDB Length = 171 Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 3/94 (3%) Query: 125 DPYEILGIST--SASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYES 182 D + + G+ + + ++ L ++HPDK A G E+ + I +A+++ Sbjct: 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQA-EQLAAVQQSATINQAWQT 60 Query: 183 LTDELVRQNYLKYGHPDGPQSTSHGIALPRFLVD 216 L L+R YL H S H + FL++ Sbjct: 61 LRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLME 94 >5Y88-T nrPDB Length = 283 Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 13/87 (14%) Query: 116 IKDAATKLFDPYEILGISTS-------ASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSV 168 ++D + + Y++L + T IK YR L++K+HPDK Sbjct: 6 LEDVINQRLNLYDVLELPTPLDVHTIYDDLPQIKRKYRTLALKYHPDKHPDN------PS 59 Query: 169 MEETYVQITKAYESLTDELVRQNYLKY 195 + + ++ A LT+ VR +Y ++ Sbjct: 60 IIHKFHLLSTATNILTNADVRPHYDRW 86 >4IT5-A nrPDB Length = 174 Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%) Query: 125 DPYEILGISTS--ASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYES 182 + +E+ G+ + S +R L +FHPD A D + + QI AY++ Sbjct: 5 NYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRL-MAVQQAAQINDAYQT 63 Query: 183 LTDELVRQNYL 193 L D L R YL Sbjct: 64 LKDPLRRAEYL 74 >3UO2-A nrPDB Length = 175 Score = 37.7 bits (86), Expect = 0.016, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 9/58 (15%) Query: 135 SASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYESLTDELVRQNY 192 + ++ YR+L + HPD +G + +AY +L D L R Y Sbjct: 21 TIDQSRLRKEYRQLQAQHHPDMAQQGSEQSST---------LNQAYHTLKDPLRRSQY 69 >5T0C-AD nrPDB Length = 418 Score = 34.3 bits (77), Expect = 0.19, Method: Composition-based stats. Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 19/148 (12%) Query: 23 LMVVGPMTLLQIYQIFFGANAEDGNS--GKSKEFNEEV-FKNLNEEYTSDEIKQFRRKFD 79 L V P T L F G ED + K+ +E+ F + EEY DE K +++F Sbjct: 18 LSVSRPQTGLS----FLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFL 73 Query: 80 KNSNKKSKIWSRRNIIIIVGWILVAILLQRINSNDAIKDAATKLFDPYEILGISTSASDR 139 + +I S I +++G L A ++ N AI + T IL S DR Sbjct: 74 HAQEEVKRIQS---IPLVIGQFLEA-----VDQNTAIVGSTTGSNYYVRIL----STIDR 121 Query: 140 DIKSAYRKLSVKFHPDKLAKGLTPDEKS 167 ++ +++ H + L L P+ S Sbjct: 122 ELLKPNASVALHKHSNALVDVLPPEADS 149 >2PF4-E nrPDB Length = 174 Score = 33.9 bits (76), Expect = 0.26, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 22/86 (25%) Query: 117 KDAATKLFDPYEILGISTSA--SDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYV 174 ++ + +L D +LG+ SA + ++ AY K +FHPDK EE Sbjct: 7 REESLQLMD---LLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----------EEKMK 53 Query: 175 QITKAYESLTDELVRQNYLKYGH-PD 199 ++ Y+ + D +KY H PD Sbjct: 54 KMNTLYKKMEDG------VKYAHQPD 73 >3BVO-A nrPDB Length = 207 Score = 33.5 bits (75), Expect = 0.27, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 12/90 (13%) Query: 124 FDPYEILGISTS--ASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYE 181 D + ++ + S ++ Y++L HPD ++ + EK E+ + AY+ Sbjct: 43 RDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQR-SQTEKDFSEKHSTLVNDAYK 101 Query: 182 SLTDELVRQNYLKYGHPDGPQSTSHGIALP 211 +L L R YL HGI +P Sbjct: 102 TLLAPLSRGLYLL---------KLHGIEIP 122 >1QU3-A nrPDB Length = 917 Score = 33.1 bits (74), Expect = 0.42, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 12/115 (10%) Query: 145 YRKLSVKFHPDKLAKGLTPDEKSVMEETYVQITKAYESLTDELVRQNYLKYGHPDGPQST 204 Y K + D +G P+++ ++E + + +++L + ++ + P Sbjct: 3 YEKTLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62 Query: 205 SH-GIALPRFLVDGSASPLLVVCYVALLGLILPYFVSRWWAR----TQSYTKKGI 254 H G AL + L D +V Y + G PY V W Q+ TKKG+ Sbjct: 63 LHMGHALNKILKD------FIVRYKTMQGFYAPY-VPGWDTHGLPIEQALTKKGV 110 >5VGZ-D nrPDB Length = 107 Score = 32.3 bits (72), Expect = 0.73, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 13/115 (11%) Query: 50 KSKEFNEEV-FKNLNEEYTSDEIKQFRRKFDKNSNKKSKIWSRRNIIIIVGWILVAILLQ 108 + K+ +E+ F + EEY DE K +++F + +I S I +++G L A Sbjct: 5 RYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQS---IPLVIGQFLEA---- 57 Query: 109 RINSNDAIKDAATKLFDPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTP 163 ++ N AI + T IL S DR++ +++ H + L L P Sbjct: 58 -VDQNTAIVGSTTGSNYYVRIL----STIDRELLKPNASVALHKHSNALVDVLPP 107 >3CLR-C nrPDB Length = 264 Score = 31.9 bits (71), Expect = 0.82, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%) Query: 109 RINSNDAIKDAATKLFDPYEILGISTSASDRDIKSAYRKLSVKFHPDKLAKGLTPDEKSV 168 R S IK AATK + + I SA+D + ++ + P+K + S Sbjct: 190 RYASLRGIKQAATKPIEEVSLADIGLSANDVGAAQSMSRVRRMYIPEKGRATMIEGTISE 249 Query: 169 MEETYVQITKAYE 181 +QI ++ Sbjct: 250 QAAKIIQIINEFK 262 >6FAI-l nrPDB Length = 425 Score = 30.8 bits (68), Expect = 2.2, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%) Query: 615 AVEQVE--VYSEEDDEYSTDDDETESD--DESDASDYTDIDTDTEAEDDESPE 663 AVE + VY+ +DD S D+ E E+ D S+ +Y D + D E+ +D+S + Sbjct: 343 AVESMRNAVYNSDDD-MSNDEAEEENGEGDYSEEDEYYDSELDNESSEDDSED 394 Score = 29.6 bits (65), Expect = 4.7, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%) Query: 622 YSEEDDEYSTD-DDETESDDESDASD 646 YSEED+ Y ++ D+E+ DD DA + Sbjct: 372 YSEEDEYYDSELDNESSEDDSEDAQE 397 >6DXA-A nrPDB Length = 396 Score = 30.4 bits (67), Expect = 2.6, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 6/69 (8%) Query: 27 GPMTLLQIYQIFFGANAEDGNSGKSKEFNEEVFKNLNEEYTSDEIKQFRRKFDKNSNKKS 86 GP T+L I A N+ + + FK N E+ ++ ++FRR DK++ KK Sbjct: 20 GPATILAI------GTATPPNAVDQSSYPDYYFKITNSEHMTELKEKFRRMCDKSAIKKR 73 Query: 87 KIWSRRNII 95 ++ I+ Sbjct: 74 YMYLTEEIL 82 >4F4Z-B nrPDB Length = 361 Score = 30.0 bits (66), Expect = 3.1, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 17/100 (17%) Query: 52 KEFNEEV-FKNLNEEY--TSDEIKQFRRKFDKNSNKKSKIWSRRNIIIIVGWILVAILLQ 108 +E++E++ +++E Y SD+++ +R ++ K+KI + I + VG Sbjct: 93 REYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVG--------- 143 Query: 109 RINSNDAIKDAATKLFDPYEILGISTSASDRDIKSAYRKL 148 I+ N A + P I D ++K R+L Sbjct: 144 -ISKNKVFAKIAADMAKPNGI----KVIDDEEVKRLIREL 178 >2UVV-A nrPDB Length = 358 Score = 30.0 bits (66), Expect = 3.1, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 17/100 (17%) Query: 52 KEFNEEV-FKNLNEEY--TSDEIKQFRRKFDKNSNKKSKIWSRRNIIIIVGWILVAILLQ 108 +E++E++ +++E Y SD+++ +R ++ K+KI + I + VG Sbjct: 99 REYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVG--------- 149 Query: 109 RINSNDAIKDAATKLFDPYEILGISTSASDRDIKSAYRKL 148 I+ N A + P I D ++K R+L Sbjct: 150 -ISKNKVFAKIAADMAKPNGI----KVIDDEEVKRLIREL 184 >3VE1-A nrPDB Length = 658 Score = 29.3 bits (64), Expect = 5.7, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 52/121 (42%), Gaps = 18/121 (14%) Query: 537 YKNLNDDKDFFDKRIKMDLTKHEKFDINDWEIGTIKIPLGQPAPETVGDFFFRVIVKSTD 596 YK+ +KDF +K+IK + + + E + ++P +VI K Sbjct: 108 YKHAASEKDFSNKKIK---SGDDGYIFYHGEKPSRQLPASG-----------KVIYKGVW 153 Query: 597 YFTTDLDITMNMKVRDSPAVEQVEVYS----EEDDEYSTDDDETESDDESDASDYTDIDT 652 +F TD + + P+ +Q + YS + +EYS ++ T DD ++++ Sbjct: 154 HFVTDTKKGQDFREIIQPSKKQGDRYSGFSGDGSEEYSNKNESTLKDDHEGYGFTSNLEV 213 Query: 653 D 653 D Sbjct: 214 D 214 >2IF2-A nrPDB Length = 204 Score = 29.3 bits (64), Expect = 6.2, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 13/144 (9%) Query: 44 EDGNSGKSKEFNEEVFKNLNEEYTSDEIKQFRRKFDKNSNKKSKIWSRRNIIIIVGWILV 103 E+GN + K+ + VFK+ + +EI R K K +K S + I+ +LV Sbjct: 60 EEGNIDR-KKLADIVFKDEEKLRKLEEITH--RALYKEIEKITKNLSEDTLFILEASLLV 116 Query: 104 AILLQRINSNDAIKDAATKLFDPYEIL---GISTSASDRDIKSAYRKLSVKFHPDKLAKG 160 D ++ PYE+ I S+ D + ++K + Sbjct: 117 E------KGTYKNYDKLIVVYAPYEVCKERAIKRGMSEEDFERRWKKQ-MPIEEKVKYAD 169 Query: 161 LTPDEKSVMEETYVQITKAYESLT 184 D +EETY Q+ K YE LT Sbjct: 170 YVIDNSGSIEETYKQVKKVYEELT 193 >6GMH-V nrPDB Length = 613 Score = 28.5 bits (62), Expect = 9.6, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 626 DDEYSTDDDETESDDESDASDYTDIDTDTEAEDD 659 +DE+S + E E D +ASD + D +ED+ Sbjct: 492 EDEHSGSESEREEGDRDEASDKSGSGEDESSEDE 525 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.317 0.135 0.393 Lambda K H 0.267 0.0412 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,812,108 Number of Sequences: 36641 Number of extensions: 1223578 Number of successful extensions: 4616 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 67 Number of HSP's that attempted gapping in prelim test: 3884 Number of HSP's gapped (non-prelim): 540 length of query: 663 length of database: 10,336,785 effective HSP length: 103 effective length of query: 560 effective length of database: 6,562,762 effective search space: 3675146720 effective search space used: 3675146720 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 62 (28.5 bits)