BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P14743 (455 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2P6F-A nrPDB 936 0.0 1IYL-A nrPDB 450 e-127 5T6E-A nrPDB 434 e-122 1RXT-A nrPDB 340 5e-94 4C2X-A nrPDB 336 1e-92 6FZ3-A nrPDB 336 1e-92 5AG6-A nrPDB 318 3e-87 6B1L-A nrPDB 308 2e-84 3ZGL-A nrPDB 31 1.3 4AS5-A nrPDB 30 1.9 1JAD-A nrPDB 30 2.8 >2P6F-A nrPDB Length = 455 Score = 936 bits (2419), Expect = 0.0, Method: Compositional matrix adjust. Identities = 455/455 (100%), Positives = 455/455 (100%) Query: 1 MSEEDKAKKLENLLKLLQLNNDDTSKFTQEQKKAMKDHKFWRTQPVKDFDEKVVEEGPID 60 MSEEDKAKKLENLLKLLQLNNDDTSKFTQEQKKAMKDHKFWRTQPVKDFDEKVVEEGPID Sbjct: 1 MSEEDKAKKLENLLKLLQLNNDDTSKFTQEQKKAMKDHKFWRTQPVKDFDEKVVEEGPID 60 Query: 61 KPKTPEDISDKPLPLLSSFEWCSIDVDNKKQLEDVFVLLNENYVEDRDAGFRFNYTKEFF 120 KPKTPEDISDKPLPLLSSFEWCSIDVDNKKQLEDVFVLLNENYVEDRDAGFRFNYTKEFF Sbjct: 61 KPKTPEDISDKPLPLLSSFEWCSIDVDNKKQLEDVFVLLNENYVEDRDAGFRFNYTKEFF 120 Query: 121 NWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSK 180 NWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSK Sbjct: 121 NWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSK 180 Query: 181 RLTPVLIKEITRRVNKCDIWHALYTAGIVLPAPVSTCRYTHRPLNWKKLYEVDFTGLPDG 240 RLTPVLIKEITRRVNKCDIWHALYTAGIVLPAPVSTCRYTHRPLNWKKLYEVDFTGLPDG Sbjct: 181 RLTPVLIKEITRRVNKCDIWHALYTAGIVLPAPVSTCRYTHRPLNWKKLYEVDFTGLPDG 240 Query: 241 HTEEDMIAENALPAKTKTAGLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIG 300 HTEEDMIAENALPAKTKTAGLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIG Sbjct: 241 HTEEDMIAENALPAKTKTAGLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIG 300 Query: 301 EESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIGYLYYYATDADFQ 360 EESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIGYLYYYATDADFQ Sbjct: 301 EESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIGYLYYYATDADFQ 360 Query: 361 FKDRFDPKATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGDGFL 420 FKDRFDPKATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGDGFL Sbjct: 361 FKDRFDPKATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGDGFL 420 Query: 421 NFYLFNYRAKPITGGLNPDNSNDIKRRSNVGVVML 455 NFYLFNYRAKPITGGLNPDNSNDIKRRSNVGVVML Sbjct: 421 NFYLFNYRAKPITGGLNPDNSNDIKRRSNVGVVML 455 >1IYL-A nrPDB Length = 392 Score = 450 bits (1158), Expect = e-127, Method: Compositional matrix adjust. Identities = 221/403 (54%), Positives = 287/403 (71%), Gaps = 14/403 (3%) Query: 56 EGPIDKPKTPEDISDKPLPLLSSFEWCSIDVDNKKQLEDVFVLLNENYVEDRDAGFRFNY 115 EGPIDK KTPED+ + PLPL+S FEW ++D+D+ QL++++ LL +NYVED DA FRF Y Sbjct: 1 EGPIDKLKTPEDVPNDPLPLISDFEWSTLDIDDNLQLDELYKLLYDNYVEDIDATFRFKY 60 Query: 116 TKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVT--LGVRGKQVPSVEINFLCV 173 + EFF WALK PGW+KDWH+GVRVK T KLVAFI+A PVT L K + SVEINFLC+ Sbjct: 61 SHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCI 120 Query: 174 HKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIVLPAPVSTCRYTHRPLNWKKLYEVD 233 HK+LR+KRL PVLIKEITRRVNK +IW ALYT G +LP P++TCRY HRP+NW KL++V Sbjct: 121 HKKLRNKRLAPVLIKEITRRVNKQNIWQALYTGGSILPTPLTTCRYQHRPINWSKLHDVG 180 Query: 234 FTGLPDGHTEEDMIAENALPAKTKTAGLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEE 293 F+ LP T+ M+A LP K GLR + +D+ V L +YQ RF+++Q+FT+EE Sbjct: 181 FSHLPPNQTKSSMVASYTLPNNPKLKGLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEE 240 Query: 294 FEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIGYLYYY 353 F+H +G + D V+ SYVVE +G ITD+FS+Y LPFT+L+N ++ +LGI YL+YY Sbjct: 241 FKHWMLGHDENS-DSNVVKSYVVEDENGIITDYFSYYLLPFTVLDNAQHDELGIAYLFYY 299 Query: 354 ATDADFQFKDRFDPKATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKF 413 A+D+ F+ K RL ELI DA I +K +DVFN LT QDNT FL D KF Sbjct: 300 ASDS-FE---------KPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKF 349 Query: 414 GPGDGFLNFYLFNYRAKPITGGLNPDNSNDIK-RRSNVGVVML 455 G GDGFLN+YLFNYR P+ GG++ ++ + S +GVV+L Sbjct: 350 GSGDGFLNYYLFNYRTFPMDGGIDKKTKEVVEDQTSGIGVVLL 392 >5T6E-A nrPDB Length = 411 Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust. Identities = 218/415 (52%), Positives = 287/415 (69%), Gaps = 9/415 (2%) Query: 42 RTQPVKDFDEKVVEEGPIDKPKTPEDISDKPLPLLSSFEWCSIDVDNKKQLEDVFVLLNE 101 +TQPV FDE + G K PE +S +P LL FEW ++D+ N+ +L++++ LL Sbjct: 5 QTQPVPRFDETSTDTGGPIKIIDPEKVSKEPDALLEGFEWATLDLTNETELQELWDLLTY 64 Query: 102 NYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVTLGVRGK 161 +YVED +A FRF Y++ F +WAL SPGWKK+WH+GVR +++KLVA I +P + VR + Sbjct: 65 HYVEDDNAMFRFRYSQSFLHWALMSPGWKKEWHVGVRATKSRKLVASICGVPTEINVRNQ 124 Query: 162 QVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIVLPAPVSTCRYTH 221 ++ VEINFLC+HK+LRSKRLTPVLIKEITRR I+ A+YTAG+VLP PVS+CRY H Sbjct: 125 KLKVVEINFLCIHKKLRSKRLTPVLIKEITRRCYLNGIYQAIYTAGVVLPTPVSSCRYYH 184 Query: 222 RPLNWKKLYEVDFTGLPDGHTEEDMIAENALPAKTKTAGLRKLKKEDIDQVFELFKRYQS 281 RPL+W KLYEV F+ LP G T+ I +N LP+ T T GLR ++ +DID V +L +RY S Sbjct: 185 RPLDWLKLYEVGFSPLPAGSTKARQITKNHLPSTTSTPGLRPMEPKDIDTVHDLLQRYLS 244 Query: 282 RFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDG-KITDFFSFYSLPFTILNNT 340 RF L Q FT+EE +H + + + +QV+++YVVE P+ KITDFFSFY+L T++ N Sbjct: 245 RFALNQAFTREEVDHWLVHKPET-VKEQVVWAYVVEDPETHKITDFFSFYNLESTVIQNP 303 Query: 341 KYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYDACILAKNANMDVFNALT 400 K+ ++ YLYYYAT+ F KALK RL L+ DA ILAK A+ DVFNALT Sbjct: 304 KHDNVRAAYLYYYATETAFT-------NNMKALKERLLMLMNDALILAKKAHFDVFNALT 356 Query: 401 SQDNTLFLDDLKFGPGDGFLNFYLFNYRAKPITGGLNPDNSNDIKRRSNVGVVML 455 DN LFL+ LKFG GDG L+FYL+NYR P+ GG+N N D KR VG+VML Sbjct: 357 LHDNPLFLEQLKFGAGDGQLHFYLYNYRTAPVPGGVNEKNLPDEKRMGGVGIVML 411 >1RXT-A nrPDB Length = 496 Score = 340 bits (873), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 179/423 (42%), Positives = 257/423 (60%), Gaps = 25/423 (5%) Query: 7 AKKLENLLKLLQLNNDDTSKFTQEQKKAMKDHKFWRTQPVKDFDEKVVEEGPIDKPKTPE 66 A++++ + K ++L + ++ + + ++FW TQPV E V GP++ K + Sbjct: 86 AERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFWDTQPVPKLGEVVNTHGPVEPDK--D 143 Query: 67 DISDKPLPLLSSFEWCSIDVDNKKQLEDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKS 126 +I +P L F W ++D+ ++ L++++ LLNENYVED D FRF+Y+ EF WAL+ Sbjct: 144 NIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRP 203 Query: 127 PGWKKDWHIGVRVKETQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVL 186 PGW WH GVRV ++KLV FISAIP + + + VEINFLCVHK+LRSKR+ PVL Sbjct: 204 PGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVL 263 Query: 187 IKEITRRVNKCDIWHALYTAGIVLPAPVSTCRYTHRPLNWKKLYEVDFTGLPDGHTEEDM 246 I+EITRRV+ I+ A+YTAG+VLP PV TCRY HR LN +KL EV F+ L T + Sbjct: 264 IREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRT 323 Query: 247 IAENALPAKTKTAGLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPL 306 + LP KTAGLR ++ +DI V +L RY +F L + ++EE EH F +E+ Sbjct: 324 MKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQEN--- 380 Query: 307 DKQVIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIGYLYYYATDADFQFKDRFD 366 +I ++VVE +G++TDF SFY+LP TI+N+ +K L Y +Y Sbjct: 381 ---IIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNV------------ 425 Query: 367 PKATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGDGFLNFYLFN 426 +T L +L+ DA +LAK DVFNAL +N FL+ LKFG GDG L +YL+N Sbjct: 426 -----HTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYN 480 Query: 427 YRA 429 ++ Sbjct: 481 WKC 483 >4C2X-A nrPDB Length = 410 Score = 336 bits (861), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 178/398 (44%), Positives = 242/398 (60%), Gaps = 25/398 (6%) Query: 32 KKAMKDHKFWRTQPVKDFDEKVVEEGPIDKPKTPEDISDKPLPLLSSFEWCSIDVDNKKQ 91 + A ++FW TQPV DE + G I+ K +++ +P L F W ++D+ + + Sbjct: 25 EAAKHRYQFWDTQPVPKLDEVITSHGAIEPDK--DNVRQEPYSLPQGFMWDTLDLSDAEV 82 Query: 92 LEDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISA 151 L++++ LLNENYVED D FRF+Y+ EF WAL+ PGW WH GVRV +KLV FISA Sbjct: 83 LKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNKKLVGFISA 142 Query: 152 IPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIVLP 211 IP + + VEINFLCVHK+LRSKR+ PVLI+EITRRVN I+ A+YTAG+VLP Sbjct: 143 IPANIRIYDSVKKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYTAGVVLP 202 Query: 212 APVSTCRYTHRPLNWKKLYEVDFTGLPDGHTEEDMIAENALPAKTKTAGLRKLKKEDIDQ 271 P++TCRY HR LN KKL EV F+ L T + + LP TKT+GLR ++ +DI Sbjct: 203 KPIATCRYWHRSLNPKKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTSGLRPMEPKDIKS 262 Query: 272 VFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFYS 331 V EL Y +F L + +EE H F+ E +I ++VVE P+GK+TDF SFY+ Sbjct: 263 VRELINTYLKQFHLAPVMDEEEVAHWFLPRE------HIIDTFVVESPNGKLTDFLSFYT 316 Query: 332 LPFTILNNTKYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYDACILAKNA 391 LP T++++ +K L Y +Y +T L +L+ DA ILAK+ Sbjct: 317 LPSTVMHHPAHKSLKAAYSFY-----------------NIHTETPLLDLMSDALILAKSK 359 Query: 392 NMDVFNALTSQDNTLFLDDLKFGPGDGFLNFYLFNYRA 429 DVFNAL +N FL+ LKFG GDG L +YL+N+R Sbjct: 360 GFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWRC 397 >6FZ3-A nrPDB Length = 403 Score = 336 bits (861), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 176/394 (44%), Positives = 243/394 (61%), Gaps = 25/394 (6%) Query: 36 KDHKFWRTQPVKDFDEKVVEEGPIDKPKTPEDISDKPLPLLSSFEWCSIDVDNKKQLEDV 95 + ++FW TQPV E V GP++ K ++I +P L F W ++D+ ++ L+++ Sbjct: 22 RSYQFWDTQPVPKLGEVVNTHGPVEPDK--DNIRQEPYTLPQGFTWDALDLGDRGVLKEL 79 Query: 96 FVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVT 155 + LLNENYVED D FRF+Y+ EF WAL+ PGW WH GVRV ++KLV FISAIP Sbjct: 80 YTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPAN 139 Query: 156 LGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIVLPAPVS 215 + + + VEINFLCVHK+LRSKR+ PVLI+EITRRV+ I+ A+YTAG+VLP PV Sbjct: 140 IHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVG 199 Query: 216 TCRYTHRPLNWKKLYEVDFTGLPDGHTEEDMIAENALPAKTKTAGLRKLKKEDIDQVFEL 275 TCRY HR LN +KL EV F+ L T + + LP KTAGLR ++ +DI V +L Sbjct: 200 TCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQL 259 Query: 276 FKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFT 335 RY +F L + ++EE EH F +E+ +I ++VVE +G++TDF SFY+LP T Sbjct: 260 LTRYLKQFHLTPVMSQEEVEHWFYPQEN------IIDTFVVENANGEVTDFLSFYTLPST 313 Query: 336 ILNNTKYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYDACILAKNANMDV 395 I+N+ +K L Y +Y +T L +L+ DA +LAK DV Sbjct: 314 IMNHPTHKSLKAAYSFYNVHT-----------------QTPLLDLMSDALVLAKMKGFDV 356 Query: 396 FNALTSQDNTLFLDDLKFGPGDGFLNFYLFNYRA 429 FNAL +N FL+ LKFG GDG L +YL+N++ Sbjct: 357 FNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKC 390 >5AG6-A nrPDB Length = 438 Score = 318 bits (815), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 172/419 (41%), Positives = 244/419 (58%), Gaps = 53/419 (12%) Query: 38 HKFWRTQPV---KDFDEKVVEEGPIDKPKTPEDISDKPLPLLSSFEWCSIDVDNKKQLED 94 H FW TQPV +D EK+V GP+D+PKT DI ++P P+ S+FEW + +++ + Sbjct: 29 HAFWSTQPVPQTEDETEKIVFAGPMDEPKTVADIPEEPYPIASTFEWWTPNMEAADDIHA 88 Query: 95 VFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPV 154 ++ LL +NYVED D+ FRFNY++EF WAL P + DWH+ VR K +KL+AFI+ +PV Sbjct: 89 IYELLRDNYVEDDDSMFRFNYSEEFLQWALCPPNYIPDWHVAVRRKADKKLLAFIAGVPV 148 Query: 155 TLGVRGKQVPSV---------------------EINFLCVHKQLRSKRLTPVLIKEITRR 193 TL + + V EINFLCVHKQLR KRL P+LIKE TRR Sbjct: 149 TLRMGTPKYMKVKAQEKGEGEEAAKYDEPRHICEINFLCVHKQLREKRLAPILIKEATRR 208 Query: 194 VNKCDIWHALYTAGIVLPAPVSTCRYTHRPLNWKKLYEVDFTGLPDGHTE----EDMIAE 249 VN+ ++W A+YTAG++LP P ++ +Y HR LN +KL E+ F+G+P + + M+ Sbjct: 209 VNRTNVWQAVYTAGVLLPTPYASGQYFHRSLNPEKLVEIRFSGIPAQYQKFQNPMAMLKR 268 Query: 250 N-ALPAKTKTAGLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDK 308 N LP+ K +GLR++K D+ QV + Y F++ +F+ E H LP D Sbjct: 269 NYQLPSAPKNSGLREMKPSDVPQVRRILMNYLDSFDVGPVFSDAEISHYL-----LPRDG 323 Query: 309 QVIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIGYLYYYATDADFQFKDRFDPK 368 V+F+YVVE D K+TDFFSFY +P T++ N+ Y L Y++YYA Sbjct: 324 -VVFTYVVEN-DKKVTDFFSFYRIPSTVIGNSNYNLLNAAYVHYYA-------------- 367 Query: 369 ATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGDGFLNFYLFNY 427 A L +LI D I+A + DV N + DN F++ LKFG GDG L +Y +N+ Sbjct: 368 ---ATSIPLHQLILDLLIVAHSRGFDVCNMVEILDNRSFVEQLKFGAGDGHLRYYFYNW 423 >6B1L-A nrPDB Length = 405 Score = 308 bits (790), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 174/398 (43%), Positives = 227/398 (57%), Gaps = 32/398 (8%) Query: 37 DHKFWRTQPV----KDFDEKVVEEGPIDKPKTPEDISDKPLPLLSSFEWCSIDVDNKKQL 92 D+KFW TQPV +F+E V E P ED+ L + W DV ++K Sbjct: 22 DYKFWYTQPVPKINDEFNESVNE--PFISDNKVEDVRKDEYKLPPGYSWYVCDVKDEKDR 79 Query: 93 EDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAI 152 +++ LL +NYVED D FRFNY+ EF WAL SP + K WHIGV+ + KL+ FISAI Sbjct: 80 SEIYTLLTDNYVEDDDNIFRFNYSAEFLLWALTSPNYLKTWHIGVKYDASNKLIGFISAI 139 Query: 153 PVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIVLPA 212 P + + + + E+NFLCVHK LRSKRL PVLIKEITRR+N +IW A+YTAG+ LP Sbjct: 140 PTDICIHKRTIKMAEVNFLCVHKTLRSKRLAPVLIKEITRRINLENIWQAIYTAGVYLPK 199 Query: 213 PVSTCRYTHRPLNWKKLYEVDFTGLPDGHTEEDMIAENALPAKTKTAGLRKLKKEDIDQV 272 PVS RY HR +N KKL E+ F+ L T I + +R +KK+D++ V Sbjct: 200 PVSDARYYHRSINVKKLIEIGFSSLNSRLTMSRAIKLYRVEDTLNIKNMRLMKKKDVEGV 259 Query: 273 FELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFYSL 332 +L Y +F L +FTKEE H F LP++ VI++YV E+ +GKI D SFYSL Sbjct: 260 HKLLGSYLEQFNLYAVFTKEEIAHWF-----LPIE-NVIYTYVNEE-NGKIKDMISFYSL 312 Query: 333 PFTILNNTKYKDLGIGYLYY-YATDADFQFKDRFDPKATKALKTRLCELIYDACILAKNA 391 P IL N KY L Y +Y T A F+ +L+ DA +LAK Sbjct: 313 PSQILGNDKYSTLNAAYSFYNVTTTATFK------------------QLMQDAILLAKRN 354 Query: 392 NMDVFNALTSQDNTLFLDDLKFGPGDGFLNFYLFNYRA 429 N DVFNAL N +DLKFG GDG L +YL+N++ Sbjct: 355 NFDVFNALEVMQNKSVFEDLKFGEGDGSLKYYLYNWKC 392 >3ZGL-A nrPDB Length = 332 Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Query: 288 IFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGI 347 I+ + E HN +SL + + E PDG I FS + + + N K +DL + Sbjct: 49 IYVRHEVVHNRYVVDSLRERGAIFIEQISEVPDGAIL-IFSAHGVSQAVRNEAKSRDLTV 107 >4AS5-A nrPDB Length = 277 Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 11/68 (16%) Query: 296 HNFIGEESLPLDKQVIF----SYVVEQPDGKITDF---FSFYSLPFTILNNTKYKDLGIG 348 H+FIGEES+ ++ +F ++V++ DG T+F F F ++ L N K++ G Sbjct: 65 HSFIGEESVAAGEKTVFTEQPTWVIDPIDGT-TNFVHRFPFVAVSIGFLVN---KEMEFG 120 Query: 349 YLYYYATD 356 +Y D Sbjct: 121 IVYSCVED 128 >1JAD-A nrPDB Length = 251 Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust. Identities = 34/160 (21%), Positives = 67/160 (41%), Gaps = 24/160 (15%) Query: 132 DWHIGVRVKETQKLVAFISAIPVTLGVRGKQVP-------SVEINFLCVHKQLRSKRLTP 184 ++H G+R ++ Q A +T R KQ+ S E N + K+L +KRL Sbjct: 93 EYHDGIRRRKEQH--ATEQTAKITELAREKQIAELKALKESSESNIKDIKKKLEAKRLDR 150 Query: 185 VLI-----------KEITRRVNKCDIWHALYTAGIVLPAPVSTCRYTHRPLNWKKLYEVD 233 + + + + + +N I + T ++ T RY + L K+ + Sbjct: 151 IQVMMRSTSDKAAQERLKKEINNSHIQEVVQTIKLLTE---KTARYQQK-LEEKQAENLR 206 Query: 234 FTGLPDGHTEEDMIAENALPAKTKTAGLRKLKKEDIDQVF 273 +G +++ +AE KT T ++++ K + +VF Sbjct: 207 AIQEKEGQLQQEAVAEYEEKLKTLTVEVQEMVKNYMKEVF 246 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2P6F-A nrPDB 718 0.0 1RXT-A nrPDB 680 0.0 6FZ3-A nrPDB 635 0.0 5T6E-A nrPDB 630 0.0 4C2X-A nrPDB 625 e-180 1IYL-A nrPDB 590 e-169 6B1L-A nrPDB 547 e-156 5AG6-A nrPDB 534 e-152 Sequences not found previously or not previously below threshold: 1QB4-A nrPDB 32 0.45 2CJU-H nrPDB 31 0.90 4UOQ-A nrPDB 30 1.6 1VHS-A nrPDB 30 2.0 1WR2-A nrPDB 30 2.5 2P82-A nrPDB 29 3.4 3VSH-B nrPDB 29 4.7 4EO2-A nrPDB 29 5.6 2MCP-H nrPDB 29 6.1 4JIE-A nrPDB 28 7.6 CONVERGED! >2P6F-A nrPDB Length = 455 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 455/455 (100%), Positives = 455/455 (100%) Query: 1 MSEEDKAKKLENLLKLLQLNNDDTSKFTQEQKKAMKDHKFWRTQPVKDFDEKVVEEGPID 60 MSEEDKAKKLENLLKLLQLNNDDTSKFTQEQKKAMKDHKFWRTQPVKDFDEKVVEEGPID Sbjct: 1 MSEEDKAKKLENLLKLLQLNNDDTSKFTQEQKKAMKDHKFWRTQPVKDFDEKVVEEGPID 60 Query: 61 KPKTPEDISDKPLPLLSSFEWCSIDVDNKKQLEDVFVLLNENYVEDRDAGFRFNYTKEFF 120 KPKTPEDISDKPLPLLSSFEWCSIDVDNKKQLEDVFVLLNENYVEDRDAGFRFNYTKEFF Sbjct: 61 KPKTPEDISDKPLPLLSSFEWCSIDVDNKKQLEDVFVLLNENYVEDRDAGFRFNYTKEFF 120 Query: 121 NWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSK 180 NWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSK Sbjct: 121 NWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSK 180 Query: 181 RLTPVLIKEITRRVNKCDIWHALYTAGIVLPAPVSTCRYTHRPLNWKKLYEVDFTGLPDG 240 RLTPVLIKEITRRVNKCDIWHALYTAGIVLPAPVSTCRYTHRPLNWKKLYEVDFTGLPDG Sbjct: 181 RLTPVLIKEITRRVNKCDIWHALYTAGIVLPAPVSTCRYTHRPLNWKKLYEVDFTGLPDG 240 Query: 241 HTEEDMIAENALPAKTKTAGLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIG 300 HTEEDMIAENALPAKTKTAGLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIG Sbjct: 241 HTEEDMIAENALPAKTKTAGLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIG 300 Query: 301 EESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIGYLYYYATDADFQ 360 EESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIGYLYYYATDADFQ Sbjct: 301 EESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIGYLYYYATDADFQ 360 Query: 361 FKDRFDPKATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGDGFL 420 FKDRFDPKATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGDGFL Sbjct: 361 FKDRFDPKATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGDGFL 420 Query: 421 NFYLFNYRAKPITGGLNPDNSNDIKRRSNVGVVML 455 NFYLFNYRAKPITGGLNPDNSNDIKRRSNVGVVML Sbjct: 421 NFYLFNYRAKPITGGLNPDNSNDIKRRSNVGVVML 455 >1RXT-A nrPDB Length = 496 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 179/426 (42%), Positives = 257/426 (60%), Gaps = 25/426 (5%) Query: 7 AKKLENLLKLLQLNNDDTSKFTQEQKKAMKDHKFWRTQPVKDFDEKVVEEGPIDKPKTPE 66 A++++ + K ++L + ++ + + ++FW TQPV E V GP++ K + Sbjct: 86 AERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFWDTQPVPKLGEVVNTHGPVEPDK--D 143 Query: 67 DISDKPLPLLSSFEWCSIDVDNKKQLEDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKS 126 +I +P L F W ++D+ ++ L++++ LLNENYVED D FRF+Y+ EF WAL+ Sbjct: 144 NIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRP 203 Query: 127 PGWKKDWHIGVRVKETQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVL 186 PGW WH GVRV ++KLV FISAIP + + + VEINFLCVHK+LRSKR+ PVL Sbjct: 204 PGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVL 263 Query: 187 IKEITRRVNKCDIWHALYTAGIVLPAPVSTCRYTHRPLNWKKLYEVDFTGLPDGHTEEDM 246 I+EITRRV+ I+ A+YTAG+VLP PV TCRY HR LN +KL EV F+ L T + Sbjct: 264 IREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRT 323 Query: 247 IAENALPAKTKTAGLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPL 306 + LP KTAGLR ++ +DI V +L RY +F L + ++EE EH F +E Sbjct: 324 MKLYRLPETPKTAGLRPMETKDIPVVHQLLTRYLKQFHLTPVMSQEEVEHWFYPQE---- 379 Query: 307 DKQVIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIGYLYYYATDADFQFKDRFD 366 +I ++VVE +G++TDF SFY+LP TI+N+ +K L Y +Y Sbjct: 380 --NIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNV------------ 425 Query: 367 PKATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGDGFLNFYLFN 426 +T L +L+ DA +LAK DVFNAL +N FL+ LKFG GDG L +YL+N Sbjct: 426 -----HTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYN 480 Query: 427 YRAKPI 432 ++ + Sbjct: 481 WKCPSM 486 >6FZ3-A nrPDB Length = 403 Score = 635 bits (1637), Expect = 0.0, Method: Composition-based stats. Identities = 176/397 (44%), Positives = 243/397 (61%), Gaps = 25/397 (6%) Query: 36 KDHKFWRTQPVKDFDEKVVEEGPIDKPKTPEDISDKPLPLLSSFEWCSIDVDNKKQLEDV 95 + ++FW TQPV E V GP++ K ++I +P L F W ++D+ ++ L+++ Sbjct: 22 RSYQFWDTQPVPKLGEVVNTHGPVEPDK--DNIRQEPYTLPQGFTWDALDLGDRGVLKEL 79 Query: 96 FVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVT 155 + LLNENYVED D FRF+Y+ EF WAL+ PGW WH GVRV ++KLV FISAIP Sbjct: 80 YTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPAN 139 Query: 156 LGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIVLPAPVS 215 + + + VEINFLCVHK+LRSKR+ PVLI+EITRRV+ I+ A+YTAG+VLP PV Sbjct: 140 IHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVG 199 Query: 216 TCRYTHRPLNWKKLYEVDFTGLPDGHTEEDMIAENALPAKTKTAGLRKLKKEDIDQVFEL 275 TCRY HR LN +KL EV F+ L T + + LP KTAGLR ++ +DI V +L Sbjct: 200 TCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMETKDIPVVHQL 259 Query: 276 FKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFT 335 RY +F L + ++EE EH F +E +I ++VVE +G++TDF SFY+LP T Sbjct: 260 LTRYLKQFHLTPVMSQEEVEHWFYPQE------NIIDTFVVENANGEVTDFLSFYTLPST 313 Query: 336 ILNNTKYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYDACILAKNANMDV 395 I+N+ +K L Y +Y +T L +L+ DA +LAK DV Sbjct: 314 IMNHPTHKSLKAAYSFYNV-----------------HTQTPLLDLMSDALVLAKMKGFDV 356 Query: 396 FNALTSQDNTLFLDDLKFGPGDGFLNFYLFNYRAKPI 432 FNAL +N FL+ LKFG GDG L +YL+N++ + Sbjct: 357 FNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSM 393 >5T6E-A nrPDB Length = 411 Score = 630 bits (1626), Expect = 0.0, Method: Composition-based stats. Identities = 218/415 (52%), Positives = 287/415 (69%), Gaps = 9/415 (2%) Query: 42 RTQPVKDFDEKVVEEGPIDKPKTPEDISDKPLPLLSSFEWCSIDVDNKKQLEDVFVLLNE 101 +TQPV FDE + G K PE +S +P LL FEW ++D+ N+ +L++++ LL Sbjct: 5 QTQPVPRFDETSTDTGGPIKIIDPEKVSKEPDALLEGFEWATLDLTNETELQELWDLLTY 64 Query: 102 NYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVTLGVRGK 161 +YVED +A FRF Y++ F +WAL SPGWKK+WH+GVR +++KLVA I +P + VR + Sbjct: 65 HYVEDDNAMFRFRYSQSFLHWALMSPGWKKEWHVGVRATKSRKLVASICGVPTEINVRNQ 124 Query: 162 QVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIVLPAPVSTCRYTH 221 ++ VEINFLC+HK+LRSKRLTPVLIKEITRR I+ A+YTAG+VLP PVS+CRY H Sbjct: 125 KLKVVEINFLCIHKKLRSKRLTPVLIKEITRRCYLNGIYQAIYTAGVVLPTPVSSCRYYH 184 Query: 222 RPLNWKKLYEVDFTGLPDGHTEEDMIAENALPAKTKTAGLRKLKKEDIDQVFELFKRYQS 281 RPL+W KLYEV F+ LP G T+ I +N LP+ T T GLR ++ +DID V +L +RY S Sbjct: 185 RPLDWLKLYEVGFSPLPAGSTKARQITKNHLPSTTSTPGLRPMEPKDIDTVHDLLQRYLS 244 Query: 282 RFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDG-KITDFFSFYSLPFTILNNT 340 RF L Q FT+EE +H + + + +QV+++YVVE P+ KITDFFSFY+L T++ N Sbjct: 245 RFALNQAFTREEVDHWLVHKPET-VKEQVVWAYVVEDPETHKITDFFSFYNLESTVIQNP 303 Query: 341 KYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYDACILAKNANMDVFNALT 400 K+ ++ YLYYYAT+ F KALK RL L+ DA ILAK A+ DVFNALT Sbjct: 304 KHDNVRAAYLYYYATETAFT-------NNMKALKERLLMLMNDALILAKKAHFDVFNALT 356 Query: 401 SQDNTLFLDDLKFGPGDGFLNFYLFNYRAKPITGGLNPDNSNDIKRRSNVGVVML 455 DN LFL+ LKFG GDG L+FYL+NYR P+ GG+N N D KR VG+VML Sbjct: 357 LHDNPLFLEQLKFGAGDGQLHFYLYNYRTAPVPGGVNEKNLPDEKRMGGVGIVML 411 >4C2X-A nrPDB Length = 410 Score = 625 bits (1613), Expect = e-180, Method: Composition-based stats. Identities = 178/406 (43%), Positives = 242/406 (59%), Gaps = 27/406 (6%) Query: 24 TSKFTQEQKKAMKDHKFWRTQPVKDFDEKVVEEGPIDKPKTPEDISDKPLPLLSSFEWCS 83 + A ++FW TQPV DE + G I+ K +++ +P L F W + Sbjct: 19 QGP--HMDEAAKHRYQFWDTQPVPKLDEVITSHGAIEPDK--DNVRQEPYSLPQGFMWDT 74 Query: 84 IDVDNKKQLEDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQ 143 +D+ + + L++++ LLNENYVED D FRF+Y+ EF WAL+ PGW WH GVRV + Sbjct: 75 LDLSDAEVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNK 134 Query: 144 KLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHAL 203 KLV FISAIP + + VEINFLCVHK+LRSKR+ PVLI+EITRRVN I+ A+ Sbjct: 135 KLVGFISAIPANIRIYDSVKKMVEINFLCVHKKLRSKRVAPVLIREITRRVNLEGIFQAV 194 Query: 204 YTAGIVLPAPVSTCRYTHRPLNWKKLYEVDFTGLPDGHTEEDMIAENALPAKTKTAGLRK 263 YTAG+VLP P++TCRY HR LN KKL EV F+ L T + + LP TKT+GLR Sbjct: 195 YTAGVVLPKPIATCRYWHRSLNPKKLVEVKFSHLSRNMTLQRTMKLYRLPDVTKTSGLRP 254 Query: 264 LKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKI 323 ++ +DI V EL Y +F L + +EE H F+ E +I ++VVE P+GK+ Sbjct: 255 MEPKDIKSVRELINTYLKQFHLAPVMDEEEVAHWFLPRE------HIIDTFVVESPNGKL 308 Query: 324 TDFFSFYSLPFTILNNTKYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYD 383 TDF SFY+LP T++++ +K L Y +Y +T L +L+ D Sbjct: 309 TDFLSFYTLPSTVMHHPAHKSLKAAYSFYN-----------------IHTETPLLDLMSD 351 Query: 384 ACILAKNANMDVFNALTSQDNTLFLDDLKFGPGDGFLNFYLFNYRA 429 A ILAK+ DVFNAL +N FL+ LKFG GDG L +YL+N+R Sbjct: 352 ALILAKSKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWRC 397 >1IYL-A nrPDB Length = 392 Score = 590 bits (1521), Expect = e-169, Method: Composition-based stats. Identities = 220/403 (54%), Positives = 285/403 (70%), Gaps = 14/403 (3%) Query: 56 EGPIDKPKTPEDISDKPLPLLSSFEWCSIDVDNKKQLEDVFVLLNENYVEDRDAGFRFNY 115 EGPIDK KTPED+ + PLPL+S FEW ++D+D+ QL++++ LL +NYVED DA FRF Y Sbjct: 1 EGPIDKLKTPEDVPNDPLPLISDFEWSTLDIDDNLQLDELYKLLYDNYVEDIDATFRFKY 60 Query: 116 TKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVT--LGVRGKQVPSVEINFLCV 173 + EFF WALK PGW+KDWH+GVRVK T KLVAFI+A PVT L K + SVEINFLC+ Sbjct: 61 SHEFFQWALKPPGWRKDWHVGVRVKSTGKLVAFIAATPVTFKLNKSNKVIDSVEINFLCI 120 Query: 174 HKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIVLPAPVSTCRYTHRPLNWKKLYEVD 233 HK+LR+KRL PVLIKEITRRVNK +IW ALYT G +LP P++TCRY HRP+NW KL++V Sbjct: 121 HKKLRNKRLAPVLIKEITRRVNKQNIWQALYTGGSILPTPLTTCRYQHRPINWSKLHDVG 180 Query: 234 FTGLPDGHTEEDMIAENALPAKTKTAGLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEE 293 F+ LP T+ M+A LP K GLR + +D+ V L +YQ RF+++Q+FT+EE Sbjct: 181 FSHLPPNQTKSSMVASYTLPNNPKLKGLRPMTGKDVSTVLSLLYKYQERFDIVQLFTEEE 240 Query: 294 FEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIGYLYYY 353 F+H +G + D V+ SYVVE +G ITD+FS+Y LPFT+L+N ++ +LGI YL+YY Sbjct: 241 FKHWMLGHDENS-DSNVVKSYVVEDENGIITDYFSYYLLPFTVLDNAQHDELGIAYLFYY 299 Query: 354 ATDADFQFKDRFDPKATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKF 413 A+D+ K RL ELI DA I +K +DVFN LT QDNT FL D KF Sbjct: 300 ASDS----------FEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQDNTYFLKDCKF 349 Query: 414 GPGDGFLNFYLFNYRAKPITGGLNPDNSNDIK-RRSNVGVVML 455 G GDGFLN+YLFNYR P+ GG++ ++ + S +GVV+L Sbjct: 350 GSGDGFLNYYLFNYRTFPMDGGIDKKTKEVVEDQTSGIGVVLL 392 >6B1L-A nrPDB Length = 405 Score = 547 bits (1410), Expect = e-156, Method: Composition-based stats. Identities = 171/398 (42%), Positives = 221/398 (55%), Gaps = 30/398 (7%) Query: 37 DHKFWRTQPVKD----FDEKVVEEGPIDKPKTPEDISDKPLPLLSSFEWCSIDVDNKKQL 92 D+KFW TQPV F+E V E P ED+ L + W DV ++K Sbjct: 22 DYKFWYTQPVPKINDEFNESVNE--PFISDNKVEDVRKDEYKLPPGYSWYVCDVKDEKDR 79 Query: 93 EDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAI 152 +++ LL +NYVED D FRFNY+ EF WAL SP + K WHIGV+ + KL+ FISAI Sbjct: 80 SEIYTLLTDNYVEDDDNIFRFNYSAEFLLWALTSPNYLKTWHIGVKYDASNKLIGFISAI 139 Query: 153 PVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIVLPA 212 P + + + + E+NFLCVHK LRSKRL PVLIKEITRR+N +IW A+YTAG+ LP Sbjct: 140 PTDICIHKRTIKMAEVNFLCVHKTLRSKRLAPVLIKEITRRINLENIWQAIYTAGVYLPK 199 Query: 213 PVSTCRYTHRPLNWKKLYEVDFTGLPDGHTEEDMIAENALPAKTKTAGLRKLKKEDIDQV 272 PVS RY HR +N KKL E+ F+ L T I + +R +KK+D++ V Sbjct: 200 PVSDARYYHRSINVKKLIEIGFSSLNSRLTMSRAIKLYRVEDTLNIKNMRLMKKKDVEGV 259 Query: 273 FELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFYSL 332 +L Y +F L +FTKEE H F+ E VI++YV E+ +GKI D SFYSL Sbjct: 260 HKLLGSYLEQFNLYAVFTKEEIAHWFLPIE------NVIYTYVNEE-NGKIKDMISFYSL 312 Query: 333 PFTILNNTKYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYDACILAKNAN 392 P IL N KY L Y +Y T +L+ DA +LAK N Sbjct: 313 PSQILGNDKYSTLNAAYSFYNVTTTAT-----------------FKQLMQDAILLAKRNN 355 Query: 393 MDVFNALTSQDNTLFLDDLKFGPGDGFLNFYLFNYRAK 430 DVFNAL N +DLKFG GDG L +YL+N++ Sbjct: 356 FDVFNALEVMQNKSVFEDLKFGEGDGSLKYYLYNWKCA 393 >5AG6-A nrPDB Length = 438 Score = 534 bits (1375), Expect = e-152, Method: Composition-based stats. Identities = 168/419 (40%), Positives = 241/419 (57%), Gaps = 53/419 (12%) Query: 38 HKFWRTQPVK---DFDEKVVEEGPIDKPKTPEDISDKPLPLLSSFEWCSIDVDNKKQLED 94 H FW TQPV D EK+V GP+D+PKT DI ++P P+ S+FEW + +++ + Sbjct: 29 HAFWSTQPVPQTEDETEKIVFAGPMDEPKTVADIPEEPYPIASTFEWWTPNMEAADDIHA 88 Query: 95 VFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPV 154 ++ LL +NYVED D+ FRFNY++EF WAL P + DWH+ VR K +KL+AFI+ +PV Sbjct: 89 IYELLRDNYVEDDDSMFRFNYSEEFLQWALCPPNYIPDWHVAVRRKADKKLLAFIAGVPV 148 Query: 155 TLGVRGKQVPSV---------------------EINFLCVHKQLRSKRLTPVLIKEITRR 193 TL + + V EINFLCVHKQLR KRL P+LIKE TRR Sbjct: 149 TLRMGTPKYMKVKAQEKGEGEEAAKYDEPRHICEINFLCVHKQLREKRLAPILIKEATRR 208 Query: 194 VNKCDIWHALYTAGIVLPAPVSTCRYTHRPLNWKKLYEVDFTGLPDGHTE----EDMIAE 249 VN+ ++W A+YTAG++LP P ++ +Y HR LN +KL E+ F+G+P + + M+ Sbjct: 209 VNRTNVWQAVYTAGVLLPTPYASGQYFHRSLNPEKLVEIRFSGIPAQYQKFQNPMAMLKR 268 Query: 250 -NALPAKTKTAGLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDK 308 LP+ K +GLR++K D+ QV + Y F++ +F+ E H + + Sbjct: 269 NYQLPSAPKNSGLREMKPSDVPQVRRILMNYLDSFDVGPVFSDAEISHYLLPRDG----- 323 Query: 309 QVIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIGYLYYYATDADFQFKDRFDPK 368 V+F+YVVE D K+TDFFSFY +P T++ N+ Y L Y++YYA Sbjct: 324 -VVFTYVVEN-DKKVTDFFSFYRIPSTVIGNSNYNLLNAAYVHYYA-------------- 367 Query: 369 ATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGDGFLNFYLFNY 427 A L +LI D I+A + DV N + DN F++ LKFG GDG L +Y +N+ Sbjct: 368 ---ATSIPLHQLILDLLIVAHSRGFDVCNMVEILDNRSFVEQLKFGAGDGHLRYYFYNW 423 >1QB4-A nrPDB Length = 883 Score = 32.4 bits (72), Expect = 0.45, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 5/84 (5%) Query: 138 RVKETQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKC 197 + E+ L ++A P + R VE+N C+ KQL +K + ++ RR+ + Sbjct: 124 KAVESLSLELVLTAHPTEITRRTLIHKMVEVN-ACL-KQLDNKDIADYEHNQLMRRL-RQ 180 Query: 198 DIWHALYTAGI--VLPAPVSTCRY 219 I + +T I + P+PV ++ Sbjct: 181 LIAQSWHTDEIRKLRPSPVDEAKW 204 >2CJU-H nrPDB Length = 121 Score = 31.2 bits (69), Expect = 0.90, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Query: 113 FNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVTLGVR---GKQVPSVEIN 169 F +T + NW + PG +W + +R K + +++ + + + +E+N Sbjct: 27 FTFTNYYMNWVRQPPGKALEWLVSIRNKANGYTTDYSASVKGRFTISRDNSQSILYLEMN 86 Query: 170 FL 171 L Sbjct: 87 NL 88 >4UOQ-A nrPDB Length = 695 Score = 30.4 bits (67), Expect = 1.6, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 11/69 (15%) Query: 30 EQKKAMKDHKFWRTQPVKDFDEKVVEEGPIDKPKTPEDISDKPLPLLSS----------F 79 W QP+ D K+ + + PED+ D+ + L+ F Sbjct: 1 MSASTQHRAHRW-PQPLPGNDRKIWFGADYNPDQWPEDVQDEDIRLMKQAGVNIVSLAIF 59 Query: 80 EWCSIDVDN 88 W +I+ + Sbjct: 60 SWANIETSD 68 >1VHS-A nrPDB Length = 175 Score = 30.1 bits (66), Expect = 2.0, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 31/87 (35%), Gaps = 15/87 (17%) Query: 261 LRKLKKEDIDQVFELFKRYQSRFELIQ---IFTKEEFEHNFIGE-ESLPLDKQVIFSYVV 316 LR + D++ V ++ + + T E+ F G ES PL YV Sbjct: 5 LRLAEHRDLEAVVAIYNSTIASRMVTADTEPVTPEDRMEWFSGHTESRPL-------YVA 57 Query: 317 EQPDGKITDFFSFYSLPFTILNNTKYK 343 E +G + + SF T Y Sbjct: 58 EDENGNVAAWISF----ETFYGRPAYN 80 >1WR2-A nrPDB Length = 238 Score = 29.7 bits (65), Expect = 2.5, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 26/71 (36%), Gaps = 11/71 (15%) Query: 229 LYEVDFTGLPDGHTEEDMIAENALPAKTKTAGLRKLKKEDIDQVFELFKR---------- 278 L +V F +P + + + A AG R + DID + ++ + Sbjct: 148 LKDVTFRLVPITEKDARKM-IQEIKAYPILAGARGEEPADIDAIVDMLLKVSKLVDDLKD 206 Query: 279 YQSRFELIQIF 289 Y +L +F Sbjct: 207 YIKEMDLNPVF 217 >2P82-A nrPDB Length = 355 Score = 29.3 bits (64), Expect = 3.4, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 1/85 (1%) Query: 298 FIGEESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIGYLYYYATDA 357 F+G+E + LD ++V + +G + D +F+ L N D + ++ + Sbjct: 266 FLGDELIFLDPHTTQTFVDTEENGTVNDQ-TFHCLQSPQRMNILNLDPSVALGFFCKEEK 324 Query: 358 DFQFKDRFDPKATKALKTRLCELIY 382 DF K R+ EL+ Sbjct: 325 DFDNWCSLVQKEILKENLRMFELVQ 349 >3VSH-B nrPDB Length = 312 Score = 28.9 bits (63), Expect = 4.7, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 24/42 (57%), Gaps = 2/42 (4%) Query: 60 DKPKTPEDISDKPLPLLSSFEWCS--IDVDNKKQLEDVFVLL 99 ++P PED+S + ++ ++W I++ + + +VF LL Sbjct: 200 EEPTIPEDMSKEYPATMAGYQWDIRMIELMRQGKTSEVFKLL 241 >4EO2-A nrPDB Length = 583 Score = 28.5 bits (62), Expect = 5.6, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 4/88 (4%) Query: 329 FYSLPFTILNNTKYKDLGIGY-LYYYATDADFQFKDRFDPKATKALKTRLCELIYDACIL 387 FY+ PF + NT + + Y+ + +F F+ + K + +L+ D Sbjct: 9 FYNTPFNNMQNTLHFNSNEERDAYFNSKFDVHEFTSTFNYRNMKGVLRVTIDLVSDRSCF 68 Query: 388 AKNANMDVFNALTSQDNT---LFLDDLK 412 + ++ Q N LF+ D++ Sbjct: 69 EQLMGVNYCQVQYIQSNRVEYLFVTDIQ 96 >2MCP-H nrPDB Length = 222 Score = 28.5 bits (62), Expect = 6.1, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 18/40 (45%) Query: 113 FNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAI 152 F ++ + W + PG + +W R K + + +++ Sbjct: 27 FTFSDFYMEWVRQPPGKRLEWIAASRNKGNKYTTEYSASV 66 >4JIE-A nrPDB Length = 503 Score = 28.1 bits (61), Expect = 7.6, Method: Composition-based stats. Identities = 6/26 (23%), Positives = 11/26 (42%) Query: 122 WALKSPGWKKDWHIGVRVKETQKLVA 147 W L ++ DWH+G + + Sbjct: 349 WNLTPTSYQDDWHVGFAYERNGVPIG 374 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.132 0.376 Lambda K H 0.267 0.0402 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,301,900 Number of Sequences: 36641 Number of extensions: 785430 Number of successful extensions: 1993 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 1924 Number of HSP's gapped (non-prelim): 39 length of query: 455 length of database: 10,336,785 effective HSP length: 100 effective length of query: 355 effective length of database: 6,672,685 effective search space: 2368803175 effective search space used: 2368803175 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 61 (28.1 bits)