BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P14306 (219 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1WPX-B nrPDB 459 e-130 1BEH-A nrPDB 63 1e-10 1A44-A nrPDB 62 1e-10 1KN3-A nrPDB 62 2e-10 2IQX-A nrPDB 60 7e-10 6ENS-A nrPDB 60 1e-09 6GAW-Bb nrPDB 50 1e-06 2R77-A nrPDB 48 4e-06 1QOU-A nrPDB 47 7e-06 1WKP-A nrPDB 45 2e-05 3AXY-A nrPDB 42 2e-04 1WKO-A nrPDB 42 2e-04 5MRC-1 nrPDB 40 0.001 3J9M-6 nrPDB 35 0.020 4BEG-A nrPDB 35 0.037 4V6U-BB nrPDB 32 0.20 1FUX-A nrPDB 29 1.5 1LUR-A nrPDB 29 2.0 1YUM-A nrPDB 28 2.3 >1WPX-B nrPDB Length = 220 Score = 459 bits (1180), Expect = e-130, Method: Compositional matrix adjust. Identities = 219/219 (100%), Positives = 219/219 (100%) Query: 1 MNQAIDFAQASIDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSK 60 MNQAIDFAQASIDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSK Sbjct: 2 MNQAIDFAQASIDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSK 61 Query: 61 PQFQFTFNKQMQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLL 120 PQFQFTFNKQMQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLL Sbjct: 62 PQFQFTFNKQMQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLL 121 Query: 121 NEATHETSGATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFS 180 NEATHETSGATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFS Sbjct: 122 NEATHETSGATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFS 181 Query: 181 KIKDRPNWGYGTPATGVGKWAKENNLQLVASNFFYAETK 219 KIKDRPNWGYGTPATGVGKWAKENNLQLVASNFFYAETK Sbjct: 182 KIKDRPNWGYGTPATGVGKWAKENNLQLVASNFFYAETK 220 >1BEH-A nrPDB Length = 187 Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 32/148 (21%) Query: 25 IHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQANAYVPQ 84 + + QP L V Y+ +A +G L + +++P +++ Sbjct: 14 LQEVDEQPQHPLHVTYAGAAVDELGKVLTPTQVKNRPT-SISWDGL-------------D 59 Query: 85 DDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSN 144 L+TLV+TDPDAPS+ D K+ E+ H + ++N ++ S T Sbjct: 60 SGKLYTLVLTDPDAPSRKDPKYREWHHFL-----VVNMKGNDISSGT------------- 101 Query: 145 TLIEYMGPAPPKGSGPHRYVFLLYKQPK 172 L +Y+G PPKG+G HRYV+L+Y+Q + Sbjct: 102 VLSDYVGSGPPKGTGLHRYVWLVYEQDR 129 >1A44-A nrPDB Length = 185 Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 18/83 (21%) Query: 88 LFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSNTLI 147 L+TLV+TDPDAPS+ D K+ E+ H + ++K N L Sbjct: 62 LYTLVLTDPDAPSRKDPKYREWHHFLVVNMK------------------GNNISSGTVLS 103 Query: 148 EYMGPAPPKGSGPHRYVFLLYKQ 170 +Y+G PPKG+G HRYV+L+Y+Q Sbjct: 104 DYVGSGPPKGTGLHRYVWLVYEQ 126 >1KN3-A nrPDB Length = 183 Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 45/185 (24%) Query: 25 IHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQANAYVPQ 84 +H+ QP +L V Y+ + +G L + + +P +++ Sbjct: 10 LHEVDEQPQHLLRVTYTEAEVEELGQVLTPTQVKHRPG-SISWDGL-------------D 55 Query: 85 DDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSN 144 L+TL++TDPDAPS+ + E+ H + ++K +SG N Sbjct: 56 PGKLYTLILTDPDAPSRKKPVYREWHHFLVVNMK----GNDISSG--------------N 97 Query: 145 TLIEYMGPAPPKGSGPHRYVFLLYKQPK-------------GVDSSKFSKIKDRPNWGYG 191 L +Y+G PPKG+G HRYV+L+Y+Q K G KF R + G Sbjct: 98 VLSDYVGSGPPKGTGLHRYVWLVYQQDKPLRCDEPILTNRSGDHRGKFKTAAFRKKYHLG 157 Query: 192 TPATG 196 P G Sbjct: 158 APVAG 162 >2IQX-A nrPDB Length = 187 Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 18/83 (21%) Query: 88 LFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSNTLI 147 L+TLV+TDPDAPS+ D K+ E+ H + ++N ++ S T L Sbjct: 63 LYTLVLTDPDAPSRKDPKFREWHHFL-----VVNMKGNDISSGT-------------VLS 104 Query: 148 EYMGPAPPKGSGPHRYVFLLYKQ 170 EY+G PPK +G HRYV+L+Y+Q Sbjct: 105 EYVGSGPPKDTGLHRYVWLVYEQ 127 >6ENS-A nrPDB Length = 193 Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 18/83 (21%) Query: 88 LFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSNTLI 147 L+TLV+TDPDAPS+ D K+ E+ H + ++N ++ S T L Sbjct: 69 LYTLVLTDPDAPSRKDPKFREWHHFL-----VVNMKGNDISSGT-------------VLS 110 Query: 148 EYMGPAPPKGSGPHRYVFLLYKQ 170 +Y+G PP G+G HRYV+L+Y+Q Sbjct: 111 DYVGSGPPSGTGLHRYVWLVYEQ 133 >6GAW-Bb nrPDB Length = 380 Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 42/164 (25%) Query: 19 GILEDVIHDTSFQPSGILAVEYSSS----APVAMGNTL-PTEKARSKPQFQFTFNKQMQK 73 G+ D+ H +F P L V Y+ PV GN + PTE A++ Sbjct: 156 GLYRDLFHGATFVPRVPLHVAYAVGEDDLMPVYHGNEVTPTEAAQA-------------- 201 Query: 74 SVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEF 133 P+ Y + L+TL++T+ D HL+E D + ++ G Sbjct: 202 --PEVT-YEADEGSLWTLLLTNLDG------------HLLEPDAEYVHWLVTNIPGNR-- 244 Query: 134 FASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSS 177 T+G T Y+ P P +GSG HR+ FLL+KQ K +D S Sbjct: 245 -----VTEGQET-CPYLPPFPARGSGFHRFAFLLFKQDKRIDFS 282 >2R77-A nrPDB Length = 205 Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 41/157 (26%), Positives = 63/157 (40%), Gaps = 26/157 (16%) Query: 11 SIDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQ 70 +I KK I+ V + + L + + + V GN L S P+ F+++ Sbjct: 21 TISELKKDRIIPHVFPNDKIDLNVDLFISFKAGKEVNHGNVLDIAGTGSVPR-NIKFSEE 79 Query: 71 MQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGA 130 P D F L M DPD PS+ E+ H V +K T E Sbjct: 80 ------------PPDGYCFVLFMVDPDYPSRLRPDGKEYIHWVVSGIK-----TKELIKG 122 Query: 131 TEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLL 167 T+ K T++ Y+GP+ KG+G HR F++ Sbjct: 123 TQ--------KNCVTILPYVGPSIKKGTGLHRISFII 151 >1QOU-A nrPDB Length = 181 Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 62/145 (42%), Gaps = 27/145 (18%) Query: 74 SVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEF 133 S P+ + FTL+MTDPD P +D E H + D+ T ++S E Sbjct: 55 STPRVEVHGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDI----PGTTDSSFGKE- 109 Query: 134 FASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNWGYGTP 193 ++ Y P P G HR+VFLL+KQ K + + R G+ T Sbjct: 110 ------------VVSYEMPRP--NIGIHRFVFLLFKQKKRGQAMLSPPVVCRD--GFNT- 152 Query: 194 ATGVGKWAKENNLQL-VASNFFYAE 217 K+ +EN L L VA+ FF + Sbjct: 153 ----RKFTQENELGLPVAAVFFNCQ 173 >1WKP-A nrPDB Length = 171 Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 19/84 (22%) Query: 87 DLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSNTL 146 + +TLVM DPD PS ++ E+ H + D+ T+G T F +E + Sbjct: 66 NFYTLVMVDPDVPSPSNPHLREYLHWLVTDIP-------ATTGTT--FGNE--------I 108 Query: 147 IEYMGPAPPKGSGPHRYVFLLYKQ 170 + Y P+P +G HR VF+L++Q Sbjct: 109 VSYENPSP--TAGIHRVVFILFRQ 130 >3AXY-A nrPDB Length = 170 Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 19/83 (22%) Query: 88 LFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSNTLI 147 +TLVM DPDAPS +D E+ H + D+ A+ F E ++ Sbjct: 66 FYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAAS---------FGQE--------VM 108 Query: 148 EYMGPAPPKGSGPHRYVFLLYKQ 170 Y P P G HR VF+L++Q Sbjct: 109 SYESPRPTMGI--HRLVFVLFQQ 129 >1WKO-A nrPDB Length = 180 Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 29/131 (22%) Query: 88 LFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSNTLI 147 FTLVM DPD P +D E H + ++ +AT F E ++ Sbjct: 70 FFTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDAT---------FGKE--------VV 112 Query: 148 EYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNWGYGTPATGVGKWAKENNLQ 207 Y P P G HR+VF+L++Q + F I R ++ K+A E +L Sbjct: 113 SYELPRP--SIGIHRFVFVLFRQKQ--RRVIFPNIPSRDHF-------NTRKFAVEYDLG 161 Query: 208 L-VASNFFYAE 217 L VA+ FF A+ Sbjct: 162 LPVAAVFFNAQ 172 >5MRC-1 nrPDB Length = 348 Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 31/145 (21%) Query: 47 AMGNTLPTEKARSKPQFQFTFNKQMQKSVP------------------QANAYVPQDDDL 88 A+ +TLPT R++ +F F+ + K + Q V + L Sbjct: 145 AIPDTLPTLVPRAEVNIKFPFSTGVNKWIEPGEFLSSNVTSMRPIFKIQEYELVNVEKQL 204 Query: 89 FTLVMTDPDAPSKTDHKW-SEFCH-LVECDLKLLNEATHETSGATEFFASEFNTKGSNTL 146 +T+++ +PD P ++ + + C+ LV +L T +F++ SN + Sbjct: 205 YTVLIVNPDVPDLSNDSFKTALCYGLVNINL---------TYNDNLIDPRKFHS--SNII 253 Query: 147 IEYMGPAPPKGSGPHRYVFLLYKQP 171 +Y+ P P K +G R+V +++QP Sbjct: 254 ADYLPPVPEKNAGKQRFVVWVFRQP 278 >3J9M-6 nrPDB Length = 380 Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust. Identities = 44/166 (26%), Positives = 67/166 (40%), Gaps = 42/166 (25%) Query: 18 HGILEDVIHDTSFQPSGILAVEYSSS----APVAMGNTL-PTEKARSKPQFQFTFNKQMQ 72 +G+ D+ H +F P L V Y+ PV GN + PTE A++ Sbjct: 155 YGLYRDLFHGATFVPRVPLHVAYAVGEDDLMPVYCGNEVTPTEAAQA------------- 201 Query: 73 KSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATE 132 P+ Y ++ L+TL++T D HL+E D + L+ G Sbjct: 202 ---PEVT-YEAEEGSLWTLLLTSLDG------------HLLEPDAEYLHWLLTNIPGN-- 243 Query: 133 FFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSK 178 Y+ P P +GSG HR FLL+KQ + +D S+ Sbjct: 244 ------RVAEGQVTCPYLPPFPARGSGIHRLAFLLFKQDQPIDFSE 283 >4BEG-A nrPDB Length = 178 Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 6/82 (7%) Query: 83 PQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKL-LNEATHETSGATEFFASEFNTK 141 P + F + + DPDAP+ S F H +L + E E Sbjct: 58 PSETRSFAVTVYDPDAPTL-----SGFWHWAVANLPANVTELPEGVGDGRELPGGALTLV 112 Query: 142 GSNTLIEYMGPAPPKGSGPHRY 163 + Y+G APP G G HRY Sbjct: 113 NDAGMRRYVGAAPPPGHGVHRY 134 >4V6U-BB nrPDB Length = 239 Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust. Identities = 30/136 (22%), Positives = 47/136 (34%), Gaps = 37/136 (27%) Query: 18 HGILEDVIHDTS------------------FQPSGILA---VEYSSSAPVAMGNTLPTEK 56 G++E+++HD P G+L + AP+A+GNTLP K Sbjct: 42 RGVVEEIMHDPGRTAPVARVKFENGIEKLIIAPEGLLVGQEIYIGPDAPIAVGNTLPLAK 101 Query: 57 ARSKPQFQFTFNKQMQKSVP-QANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVEC 115 P+ + +N + +P YV +V +PD L Sbjct: 102 I---PEGTYVYNIE---GIPGDGGKYVRAGGTYALVVSREPD---------KVIVQLPSG 146 Query: 116 DLKLLNEATHETSGAT 131 +LK N T G Sbjct: 147 ELKAFNPMCRATIGVV 162 >1FUX-A nrPDB Length = 166 Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 14/93 (15%) Query: 82 VPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLL------NEATHETSGATEFFA 135 VP+ F + + DPDAP+ + W + + L + T +GA + Sbjct: 41 VPEGTKSFAVTVYDPDAPTGSGW-WHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQG-R 98 Query: 136 SEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLY 168 ++F G + G PPKG PH Y F ++ Sbjct: 99 NDFGYAG------FGGACPPKGDKPHHYQFKVW 125 >1LUR-A nrPDB Length = 339 Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Query: 53 PTEKARSKPQ--FQFTFNKQMQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSE 108 PT RS F F KQ+++S A + D+DL T P PS WSE Sbjct: 204 PTGAIRSVTDTGFDFRSGKQLKESGKDAEELLDLDNDLVITKKTPPSTPSTYLRFWSE 261 >1YUM-A nrPDB Length = 242 Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 10/81 (12%) Query: 36 LAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQANAYVPQDDDLFTLVMTD 95 LA+ + A V P E R KP + ++ A + DD LF L+ D Sbjct: 77 LAMVERAVAGVERLTVDPRELQRDKPSYTI-------DTLESVRAELAADDQLFMLIGWD 129 Query: 96 PDAPSKTDHKWSEF---CHLV 113 T H+W CH+V Sbjct: 130 AFCGLPTWHRWEALLDHCHIV 150 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1WPX-B nrPDB 313 5e-86 1KN3-A nrPDB 162 2e-40 1BEH-A nrPDB 156 6e-39 1A44-A nrPDB 150 6e-37 2R77-A nrPDB 143 5e-35 1QOU-A nrPDB 143 7e-35 6ENS-A nrPDB 143 7e-35 2IQX-A nrPDB 141 2e-34 1WKO-A nrPDB 132 1e-31 6GAW-Bb nrPDB 128 2e-30 5MRC-1 nrPDB 115 1e-26 1WKP-A nrPDB 106 1e-23 3AXY-A nrPDB 102 2e-22 Sequences not found previously or not previously below threshold: 3J9M-6 nrPDB 100 8e-22 4BEG-A nrPDB 47 5e-06 6HIV-Ab nrPDB 43 1e-04 1FUX-A nrPDB 39 0.002 5ZJR-A nrPDB 32 0.20 2WMI-B nrPDB 29 1.8 >1WPX-B nrPDB Length = 220 Score = 313 bits (800), Expect = 5e-86, Method: Composition-based stats. Identities = 219/219 (100%), Positives = 219/219 (100%) Query: 1 MNQAIDFAQASIDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSK 60 MNQAIDFAQASIDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSK Sbjct: 2 MNQAIDFAQASIDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSK 61 Query: 61 PQFQFTFNKQMQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLL 120 PQFQFTFNKQMQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLL Sbjct: 62 PQFQFTFNKQMQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLL 121 Query: 121 NEATHETSGATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFS 180 NEATHETSGATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFS Sbjct: 122 NEATHETSGATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFS 181 Query: 181 KIKDRPNWGYGTPATGVGKWAKENNLQLVASNFFYAETK 219 KIKDRPNWGYGTPATGVGKWAKENNLQLVASNFFYAETK Sbjct: 182 KIKDRPNWGYGTPATGVGKWAKENNLQLVASNFFYAETK 220 >1KN3-A nrPDB Length = 183 Score = 162 bits (408), Expect = 2e-40, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 45/186 (24%) Query: 25 IHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQANAYVPQ 84 +H+ QP +L V Y+ + +G L + + +P +++ Sbjct: 10 LHEVDEQPQHLLRVTYTEAEVEELGQVLTPTQVKHRPG-SISWDGL-------------D 55 Query: 85 DDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSN 144 L+TL++TDPDAPS+ + E+ H + ++K + N Sbjct: 56 PGKLYTLILTDPDAPSRKKPVYREWHHFLVVNMKG------------------NDISSGN 97 Query: 145 TLIEYMGPAPPKGSGPHRYVFLLYKQPK-------------GVDSSKFSKIKDRPNWGYG 191 L +Y+G PPKG+G HRYV+L+Y+Q K G KF R + G Sbjct: 98 VLSDYVGSGPPKGTGLHRYVWLVYQQDKPLRCDEPILTNRSGDHRGKFKTAAFRKKYHLG 157 Query: 192 TPATGV 197 P G Sbjct: 158 APVAGT 163 >1BEH-A nrPDB Length = 187 Score = 156 bits (394), Expect = 6e-39, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 45/186 (24%) Query: 25 IHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQANAYVPQ 84 + + QP L V Y+ +A +G L + +++P +++ Sbjct: 14 LQEVDEQPQHPLHVTYAGAAVDELGKVLTPTQVKNRPT-SISWDGL-------------D 59 Query: 85 DDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSN 144 L+TLV+TDPDAPS+ D K+ E+ H + ++K ++ S T Sbjct: 60 SGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKG-----NDISSGT------------- 101 Query: 145 TLIEYMGPAPPKGSGPHRYVFLLYKQPK-------------GVDSSKFSKIKDRPNWGYG 191 L +Y+G PPKG+G HRYV+L+Y+Q + G KF R + Sbjct: 102 VLSDYVGSGPPKGTGLHRYVWLVYEQDRPLKCDEPILSNRSGDHRGKFKVASFRKKYELR 161 Query: 192 TPATGV 197 P G Sbjct: 162 APVAGT 167 >1A44-A nrPDB Length = 185 Score = 150 bits (377), Expect = 6e-37, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 45/186 (24%) Query: 25 IHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQANAYVPQ 84 + + +P L V+Y + +G L + +++P T++ Sbjct: 13 LQEVDERPQHPLQVKYGGAEVDELGKVLTPTQVKNRPT-SITWDGL-------------D 58 Query: 85 DDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSN 144 L+TLV+TDPDAPS+ D K+ E+ H + ++K N Sbjct: 59 PGKLYTLVLTDPDAPSRKDPKYREWHHFLVVNMKG------------------NNISSGT 100 Query: 145 TLIEYMGPAPPKGSGPHRYVFLLYKQP-------------KGVDSSKFSKIKDRPNWGYG 191 L +Y+G PPKG+G HRYV+L+Y+Q G KF R + G Sbjct: 101 VLSDYVGSGPPKGTGLHRYVWLVYEQEGPLKCDEPILSNRSGDHRGKFKVASFRKKYELG 160 Query: 192 TPATGV 197 P G Sbjct: 161 APVAGT 166 >2R77-A nrPDB Length = 205 Score = 143 bits (360), Expect = 5e-35, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 70/187 (37%), Gaps = 42/187 (22%) Query: 11 SIDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQ 70 +I KK I+ V + + L + + + V GN L S P+ F+++ Sbjct: 21 TISELKKDRIIPHVFPNDKIDLNVDLFISFKAGKEVNHGNVLDIAGTGSVPR-NIKFSEE 79 Query: 71 MQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGA 130 P D F L M DPD PS+ E+ H V +K T E Sbjct: 80 ------------PPDGYCFVLFMVDPDYPSRLRPDGKEYIHWVVSGIK-----TKELIKG 122 Query: 131 TEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLL----------------YKQPKGV 174 T+ K T++ Y+GP+ KG+G HR F++ YK K + Sbjct: 123 TQ--------KNCVTILPYVGPSIKKGTGLHRISFIISLIKEEDKDNITGLPHYKGEKYI 174 Query: 175 DSSKFSK 181 KF+ Sbjct: 175 TRVKFNN 181 >1QOU-A nrPDB Length = 181 Score = 143 bits (359), Expect = 7e-35, Method: Composition-based stats. Identities = 53/214 (24%), Positives = 82/214 (38%), Gaps = 47/214 (21%) Query: 8 AQASIDSYKKHGILEDVIHDTSFQPSGILAVEYSSS---APVAMGNTLPTEKARSKPQFQ 64 A+ S D ++ DV+ F + ++V Y+S+ V G+ L Sbjct: 3 AKVSSDPLVIGRVIGDVV--DHFTSTVKMSVIYNSNNSIKHVYNGHELFPSAV------- 53 Query: 65 FTFNKQMQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEAT 124 S P+ + FTL+MTDPD P +D E H + D+ T Sbjct: 54 --------TSTPRVEVHGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPG----T 101 Query: 125 HETSGATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKD 184 ++S E ++ Y P P G HR+VFLL+KQ K + + Sbjct: 102 TDSSFGKE-------------VVSYEMPRP--NIGIHRFVFLLFKQKKRGQAMLSPPVVC 146 Query: 185 RPNWGYGTPATGVGKWAKENNLQL-VASNFFYAE 217 R + K+ +EN L L VA+ FF + Sbjct: 147 RDGF-------NTRKFTQENELGLPVAAVFFNCQ 173 >6ENS-A nrPDB Length = 193 Score = 143 bits (359), Expect = 7e-35, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 45/189 (23%) Query: 22 EDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQANAY 81 + + P L V+Y+ +G L + ++P +++ Sbjct: 17 PLCLQEVDEPPQHALRVDYAGVTVDELGKVLTPTQVMNRPS-SISWDGL----------- 64 Query: 82 VPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTK 141 L+TLV+TDPDAPS+ D K+ E+ H + ++K ++ S T Sbjct: 65 --DPGKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKG-----NDISSGT---------- 107 Query: 142 GSNTLIEYMGPAPPKGSGPHRYVFLLYKQPK-------------GVDSSKFSKIKDRPNW 188 L +Y+G PP G+G HRYV+L+Y+Q + G + KF R + Sbjct: 108 ---VLSDYVGSGPPSGTGLHRYVWLVYEQEQPLSCDEPILSNKSGDNRGKFKVETFRKKY 164 Query: 189 GYGTPATGV 197 G P G Sbjct: 165 NLGAPVAGT 173 >2IQX-A nrPDB Length = 187 Score = 141 bits (354), Expect = 2e-34, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 76/186 (40%), Gaps = 45/186 (24%) Query: 25 IHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQANAYVPQ 84 + + P L V+Y +G L + ++P +++ Sbjct: 14 LQEVDEPPQHALRVDYGGVTVDELGKVLTPTQVMNRPS-SISWDGL-------------D 59 Query: 85 DDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSN 144 L+TLV+TDPDAPS+ D K+ E+ H + ++K ++ S T Sbjct: 60 PGKLYTLVLTDPDAPSRKDPKFREWHHFLVVNMKG-----NDISSGT------------- 101 Query: 145 TLIEYMGPAPPKGSGPHRYVFLLYKQPK-------------GVDSSKFSKIKDRPNWGYG 191 L EY+G PPK +G HRYV+L+Y+Q + G + KF + R + G Sbjct: 102 VLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSGDNRGKFKVEEFRKKYHLG 161 Query: 192 TPATGV 197 P G Sbjct: 162 APVAGT 167 >1WKO-A nrPDB Length = 180 Score = 132 bits (332), Expect = 1e-31, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 82/207 (39%), Gaps = 47/207 (22%) Query: 12 IDSYKKHGILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQM 71 I+ ++ DV+ F P+ + V Y+ V+ G+ L SKP+ + Sbjct: 12 IEPLIMGRVVGDVL--DFFTPTTKMNVSYNK-KQVSNGHELFPSSVSSKPRVEI------ 62 Query: 72 QKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGAT 131 + FTLVM DPD P +D E H + ++ +AT Sbjct: 63 ---------HGGDLRSFFTLVMIDPDVPGPSDPFLKEHLHWIVTNIPGTTDAT------- 106 Query: 132 EFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNWGYG 191 F E ++ Y P P G HR+VF+L++Q + F I R ++ Sbjct: 107 --FGKE--------VVSYELPRP--SIGIHRFVFVLFRQKQR--RVIFPNIPSRDHF--- 149 Query: 192 TPATGVGKWAKENNLQL-VASNFFYAE 217 K+A E +L L VA+ FF A+ Sbjct: 150 ----NTRKFAVEYDLGLPVAAVFFNAQ 172 >6GAW-Bb nrPDB Length = 380 Score = 128 bits (320), Expect = 2e-30, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 63/163 (38%), Gaps = 40/163 (24%) Query: 19 GILEDVIHDTSFQPSGILAVEYSSS----APVAMGNTLPTEKARSKPQFQFTFNKQMQKS 74 G+ D+ H +F P L V Y+ PV GN + +A P+ Sbjct: 156 GLYRDLFHGATFVPRVPLHVAYAVGEDDLMPVYHGNEVTPTEAAQAPEVT---------- 205 Query: 75 VPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFF 134 Y + L+TL++T+ D HL+E D + ++ G Sbjct: 206 ------YEADEGSLWTLLLTNLDG------------HLLEPDAEYVHWLVTNIPGNRVTE 247 Query: 135 ASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSS 177 E Y+ P P +GSG HR+ FLL+KQ K +D S Sbjct: 248 GQET--------CPYLPPFPARGSGFHRFAFLLFKQDKRIDFS 282 >5MRC-1 nrPDB Length = 348 Score = 115 bits (288), Expect = 1e-26, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 77/189 (40%), Gaps = 28/189 (14%) Query: 47 AMGNTLPTEKARSKPQFQFTFNKQMQKSVP------------------QANAYVPQDDDL 88 A+ +TLPT R++ +F F+ + K + Q V + L Sbjct: 145 AIPDTLPTLVPRAEVNIKFPFSTGVNKWIEPGEFLSSNVTSMRPIFKIQEYELVNVEKQL 204 Query: 89 FTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSNTLIE 148 +T+++ +PD P ++ + ++ + T +F++ SN + + Sbjct: 205 YTVLIVNPDVPDLSNDSFKTALCYGLVNI-------NLTYNDNLIDPRKFHS--SNIIAD 255 Query: 149 YMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNWGYGTPATGVGKWAKENNLQL 208 Y+ P P K +G R+V +++QP D + + + + ++ K+ NL Sbjct: 256 YLPPVPEKNAGKQRFVVWVFRQPLIEDK-QGPNMLEIDRKELSRDDFDIRQFTKKYNLTA 314 Query: 209 VASNFFYAE 217 + ++ + +E Sbjct: 315 IGAHIWRSE 323 >1WKP-A nrPDB Length = 171 Score = 106 bits (263), Expect = 1e-23, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 75/200 (37%), Gaps = 48/200 (24%) Query: 19 GILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQA 78 ++ DV+ F S L V Y V G L + ++KP+ + Sbjct: 16 RVVGDVL--DPFNRSITLKVTY-GQREVTNGLNLRPSQVQNKPRVEIG------------ 60 Query: 79 NAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEF 138 + +TLVM DPD PS ++ E+ H + D+ Sbjct: 61 ---GEDLRNFYTLVMVDPDVPSPSNPHLREYLHWLVTDIPATT----------------- 100 Query: 139 NTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNWGYGTPATGVG 198 T N ++ Y P+P +G HR VF+L++Q + P W Sbjct: 101 GTTFGNEIVSYENPSPT--AGIHRVVFILFRQ-------LGRQTVYAPGWRQN---FNTR 148 Query: 199 KWAKENNLQL-VASNFFYAE 217 ++A+ NL L VA+ F+ ++ Sbjct: 149 EFAEIYNLGLPVAAVFYNSQ 168 >3AXY-A nrPDB Length = 170 Score = 102 bits (252), Expect = 2e-22, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 72/200 (36%), Gaps = 48/200 (24%) Query: 19 GILEDVIHDTSFQPSGILAVEYSSSAPVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQA 78 ++ DV+ +F S L V Y S V+ G L +P + Sbjct: 15 RVVGDVL--DAFVRSTNLKVTY-GSKTVSNGLELKPSMVTHQP---------------RV 56 Query: 79 NAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEF 138 +TLVM DPDAPS +D E+ H + D+ A+ F E Sbjct: 57 EVGGNDMRTFYTLVMVDPDAPSPSDPNLREYLHWLVTDIPGTTAAS---------FGQE- 106 Query: 139 NTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNWGYGTPATGVG 198 ++ Y P P G HR VF+L++Q + P W Sbjct: 107 -------VMSYESPRPTM--GIHRLVFVLFQQ-------LGRQTVYAPGWRQN---FNTK 147 Query: 199 KWAKENNLQL-VASNFFYAE 217 +A+ NL VA+ +F ++ Sbjct: 148 DFAELYNLGSPVAAVYFNSQ 167 >3J9M-6 nrPDB Length = 380 Score = 99.7 bits (246), Expect = 8e-22, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 68/206 (33%), Gaps = 44/206 (21%) Query: 18 HGILEDVIHDTSFQPSGILAVEYSSS----APVAMGNTLPTEKARSKPQFQFTFNKQMQK 73 +G+ D+ H +F P L V Y+ PV GN + +A P+ + + Sbjct: 155 YGLYRDLFHGATFVPRVPLHVAYAVGEDDLMPVYCGNEVTPTEAAQAPEVTYEAEEGSLW 214 Query: 74 SVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEF 133 ++ + HL+E D + L+ G Sbjct: 215 TLLLTSLDG----------------------------HLLEPDAEYLHWLLTNIPGNRVA 246 Query: 134 FASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNWGYGTP 193 Y+ P P +GSG HR FLL+KQ + +D S + P + Sbjct: 247 EGQ--------VTCPYLPPFPARGSGIHRLAFLLFKQDQPIDFS--EDARPSPCYQLAQR 296 Query: 194 ATGVGKWAKENNLQLVAS--NFFYAE 217 + K++ + + +FF Sbjct: 297 TFRTFDFYKKHQETMTPAGLSFFQCR 322 >4BEG-A nrPDB Length = 178 Score = 47.3 bits (110), Expect = 5e-06, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 42/120 (35%), Gaps = 7/120 (5%) Query: 51 TLPTEKARSKPQFQFTFNKQMQKSVPQANAYV-PQDDDLFTLVMTDPDAPSKTDHKWSEF 109 ++ + + PQ + PQ P + F + + DPDAP+ + F Sbjct: 25 SITDGQPLATPQVSGIMGAGGADASPQLRWSGFPSETRSFAVTVYDPDAPTLSG-----F 79 Query: 110 CHLVECDLKL-LNEATHETSGATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLY 168 H +L + E E + Y+G APP G G HRY ++ Sbjct: 80 WHWAVANLPANVTELPEGVGDGRELPGGALTLVNDAGMRRYVGAAPPPGHGVHRYYVAVH 139 >6HIV-Ab nrPDB Length = 507 Score = 42.7 bits (98), Expect = 1e-04, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 50/145 (34%), Gaps = 23/145 (15%) Query: 49 GNTLPTEKARSKPQFQF---TFNKQMQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHK 105 GN + + P F K+V + D+ +TL++ PD P + Sbjct: 207 GNYIELADLQHPPSIFFLDTVSATGQGKAVEKDATEEGSDEVWYTLIIASPDYPFRVPAS 266 Query: 106 WSE------FCHLVECDLKLLNEATHETSGATEFFASE--------------FNTKGSNT 145 F + + +LK +T +E + K + Sbjct: 267 VDASTQRGFFLNYMMSNLKGGGNSTVLEEYESEQRQNNQKRQHLEELVRNPAPIAKEGDV 326 Query: 146 LIEYMGPAPPKGSGPHRYVFLLYKQ 170 ++ Y P P + +G R++ +L+KQ Sbjct: 327 IVSYTPPLPTEDAGTTRHICMLFKQ 351 >1FUX-A nrPDB Length = 166 Score = 38.8 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 37/103 (35%), Gaps = 8/103 (7%) Query: 69 KQMQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETS 128 + S + VP+ F + + DPDAP+ S + H ++ + Sbjct: 28 EGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPT-----GSGWWHWTVVNIPATVTYLPVDA 82 Query: 129 G---ATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLY 168 G T+ + + G PPKG PH Y F ++ Sbjct: 83 GRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVW 125 >5ZJR-A nrPDB Length = 84 Score = 31.9 bits (70), Expect = 0.20, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 1/59 (1%) Query: 150 MGPAPPKGSGPHRYVFLLYKQPKGVDSSKFSKIKDRPNWGYGTPATGVGKWAKENNLQL 208 +GP P G H + + + K SKF ++ + + + +W NLQL Sbjct: 1 VGPCTP-NPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQL 58 >2WMI-B nrPDB Length = 606 Score = 28.8 bits (62), Expect = 1.8, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 28/79 (35%), Gaps = 1/79 (1%) Query: 47 AMGNTLPTEKARSKPQFQFTFNKQMQKSVPQANAYVPQDDDLFTLVMTDPDAPSKTDHKW 106 + A + Q + ++ +P D +T++ PD K D Sbjct: 34 EHPLLMMPLYANGEEFNQGKYTFWGGDTLTGKWENIPDDLKPYTVIQLHPDDLPKRDGAA 93 Query: 107 SE-FCHLVECDLKLLNEAT 124 + + H++E K +N T Sbjct: 94 RDFYEHMLEEAAKYVNPKT 112 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.302 0.107 0.258 Lambda K H 0.267 0.0326 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,673,362 Number of Sequences: 36641 Number of extensions: 237516 Number of successful extensions: 470 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 389 Number of HSP's gapped (non-prelim): 38 length of query: 219 length of database: 10,336,785 effective HSP length: 93 effective length of query: 126 effective length of database: 6,929,172 effective search space: 873075672 effective search space used: 873075672 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.5 bits) S2: 56 (26.5 bits)