BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P13500 (99 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1DOL-A nrPDB 159 2e-40 1NCV-A nrPDB 115 6e-27 1EOT-A nrPDB 108 5e-25 1ESR-A nrPDB 106 2e-24 2RA4-A nrPDB 103 2e-23 4ZKB-B nrPDB 58 1e-09 1EIG-A nrPDB 57 2e-09 2X6L-A nrPDB 55 7e-09 5WB2-B nrPDB 51 1e-07 1ZXT-A nrPDB 51 1e-07 2Q8R-E nrPDB 50 2e-07 5EKI-A nrPDB 50 2e-07 2Q8T-A nrPDB 50 2e-07 4ZLT-F nrPDB 50 2e-07 4XT3-B nrPDB 50 2e-07 2L4N-A nrPDB 50 3e-07 1G2S-A nrPDB 47 2e-06 4MHE-A nrPDB 47 2e-06 5YAM-A nrPDB 46 4e-06 5UIW-B nrPDB 45 5e-06 5LTL-A nrPDB 45 9e-06 2VXW-A nrPDB 44 1e-05 1EQT-A nrPDB 44 2e-05 1J9O-A nrPDB 42 4e-05 1NR4-A nrPDB 42 5e-05 2HCC-A nrPDB 42 6e-05 1G91-A nrPDB 41 1e-04 4OIK-A nrPDB 40 2e-04 2JYO-A nrPDB 40 2e-04 1HHV-A nrPDB 40 2e-04 4RWS-C nrPDB 40 3e-04 1HA6-A nrPDB 39 3e-04 5L7M-A nrPDB 35 0.006 2MP1-A nrPDB 34 0.018 4XDX-A nrPDB 31 0.14 5CBA-E nrPDB 30 0.19 6EHZ-A nrPDB 27 2.0 4LMQ-D nrPDB 27 2.1 2K04-A nrPDB 27 2.1 2N55-A nrPDB 25 7.1 >1DOL-A nrPDB Length = 77 Score = 159 bits (403), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 76/76 (100%), Positives = 76/76 (100%) Query: 24 QPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWV 83 QPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWV Sbjct: 2 QPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWV 61 Query: 84 QDSMDHLDKQTQTPKT 99 QDSMDHLDKQTQTPKT Sbjct: 62 QDSMDHLDKQTQTPKT 77 >1NCV-A nrPDB Length = 76 Score = 115 bits (287), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 54/75 (72%), Positives = 58/75 (77%) Query: 24 QPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWV 83 QP IN TCCY F N+KI QRL SYRR TSS CP+EAVIFKT + KEICADP QKWV Sbjct: 1 QPVGINTSTTCCYRFINKKIPKQRLESYRRTTSSHCPREAVIFKTKLDKEICADPTQKWV 60 Query: 84 QDSMDHLDKQTQTPK 98 QD M HLDK+TQTPK Sbjct: 61 QDFMKHLDKKTQTPK 75 >1EOT-A nrPDB Length = 74 Score = 108 bits (270), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 48/70 (68%), Positives = 60/70 (85%) Query: 29 NAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMD 88 + P TCC+N NRKI +QRL SYRRITS KCP++AVIFKT +AK+ICADPK+KWVQDSM Sbjct: 4 SVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMK 63 Query: 89 HLDKQTQTPK 98 +LD+++ TPK Sbjct: 64 YLDQKSPTPK 73 >1ESR-A nrPDB Length = 76 Score = 106 bits (265), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 47/75 (62%), Positives = 60/75 (80%) Query: 24 QPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWV 83 QPD+++ P+TCC+N NRKI +QRL SY RIT+ +CPKEAVIFKT KE+CADPK++WV Sbjct: 1 QPDSVSIPITCCFNVINRKIPIQRLESYTRITNIQCPKEAVIFKTQRGKEVCADPKERWV 60 Query: 84 QDSMDHLDKQTQTPK 98 +DSM HLD+ Q K Sbjct: 61 RDSMKHLDQIFQNLK 75 >2RA4-A nrPDB Length = 76 Score = 103 bits (256), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 46/76 (60%), Positives = 62/76 (81%), Gaps = 1/76 (1%) Query: 24 QPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWV 83 QPDA+N P TCC+ F+++KIS+QRL SY IT+S+CP++AVIF+T + KEICADPK+KWV Sbjct: 2 QPDALNVPSTCCFTFSSKKISLQRLKSYV-ITTSRCPQKAVIFRTKLGKEICADPKEKWV 60 Query: 84 QDSMDHLDKQTQTPKT 99 Q+ M HL ++ T KT Sbjct: 61 QNYMKHLGRKAHTLKT 76 >4ZKB-B nrPDB Length = 75 Score = 57.8 bits (138), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%) Query: 27 AINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDS 86 A + P CC+++T+R+I +A Y TSS+C K VIF T ++++CADP ++WVQ Sbjct: 3 AADTPTACCFSYTSRQIPQNFIADYFE-TSSQCSKPGVIFLTKRSRQVCADPSEEWVQKY 61 Query: 87 MDHLD 91 + L+ Sbjct: 62 VSDLE 66 >1EIG-A nrPDB Length = 73 Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 26/61 (42%), Positives = 36/61 (59%) Query: 31 PVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHL 90 P CC F +++I R+ SY+ + S C K VIF T ++ C DPKQ+WVQ M +L Sbjct: 4 PSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQSCGDPKQEWVQRYMKNL 63 Query: 91 D 91 D Sbjct: 64 D 64 >2X6L-A nrPDB Length = 69 Score = 55.1 bits (131), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 25 PDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQ 84 P + P CC+++T RK+ + Y TSS C + AV+F+T +K++CADP + WVQ Sbjct: 2 PMGSDPPTACCFSYTARKLPRNFVVDYYE-TSSLCSQPAVVFQTKRSKQVCADPSESWVQ 60 Query: 85 DSMDHLD 91 + + L+ Sbjct: 61 EYVYDLE 67 >5WB2-B nrPDB Length = 76 Score = 50.8 bits (120), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 3/69 (4%) Query: 25 PDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQ 84 P A +TC + KI V L Y++ +S C K A+I +T + CADPK++WV+ Sbjct: 3 PHANYCAITC--SKMTSKIPVALLIHYQQNQAS-CGKRAIILETRQHRLFCADPKEQWVK 59 Query: 85 DSMDHLDKQ 93 D+M HLD+Q Sbjct: 60 DAMQHLDRQ 68 >1ZXT-A nrPDB Length = 76 Score = 50.8 bits (120), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 31 PVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHL 90 P +CCY F VQ L + TS CPK VI T ++ICADP + WV+ M L Sbjct: 8 PNSCCYGFQQHPPPVQILKEWYP-TSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRL 66 >2Q8R-E nrPDB Length = 66 Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 31 PVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQD 85 P CC+ +T KI QR+ Y T+S+C K ++F T +C +P KWVQD Sbjct: 5 PSECCFTYTTYKIPRQRIMDYYE-TNSQCSKPGIVFITKRGHSVCTNPSDKWVQD 58 >5EKI-A nrPDB Length = 79 Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 3/62 (4%) Query: 34 CCYNFTNRKISVQRLASYRRITSS-KCPKEAVIF--KTIVAKEICADPKQKWVQDSMDHL 90 CC ++ RKI + + SYR+ S C A++F + E+CADPK+ WVQ M HL Sbjct: 8 CCLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELWVQQLMQHL 67 Query: 91 DK 92 DK Sbjct: 68 DK 69 >2Q8T-A nrPDB Length = 74 Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 31 PVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQD 85 P CC+ +T KI QR+ Y T+S+C K ++F T +C +P KWVQD Sbjct: 13 PSECCFTYTTYKIPRQRIMDYYE-TNSQCSKPGIVFITKRGHSVCTNPSDKWVQD 66 >4ZLT-F nrPDB Length = 70 Score = 50.1 bits (118), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%) Query: 25 PDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQ 84 P + P CC++++ RKI Q + +Y TSS C + VIF T ++ICAD K+ WVQ Sbjct: 3 PYGADTPTACCFSYS-RKIPRQFIVAYFE-TSSLCSQPGVIFLTKRNRQICADSKETWVQ 60 Query: 85 DSMDHLD 91 + + L+ Sbjct: 61 EYITDLE 67 >4XT3-B nrPDB Length = 91 Score = 50.1 bits (118), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%) Query: 42 KISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQ 93 KI V L Y++ +S C K A+I +T + CADPK++WV+D+M HLD+Q Sbjct: 18 KIPVALLIHYQQNQAS-CGKRAIILETRQHRLFCADPKEQWVKDAMQHLDRQ 68 >2L4N-A nrPDB Length = 113 Score = 49.7 bits (117), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 3/62 (4%) Query: 34 CCYNFTNRKISVQRLASYRRITSS-KCPKEAVIF--KTIVAKEICADPKQKWVQDSMDHL 90 CC ++ RKI + + SYR+ S C A++F + E+CADPK+ WVQ M HL Sbjct: 8 CCLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELWVQQLMQHL 67 Query: 91 DK 92 DK Sbjct: 68 DK 69 >1G2S-A nrPDB Length = 71 Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 5/66 (7%) Query: 33 TCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDK 92 TCC+ ++++ + + SY TS+ C + AVIF T K++C P++KWVQ + L Sbjct: 9 TCCFQYSHKPLPWTWVRSYE-FTSNSCSQRAVIFTTKRGKKVCTHPRKKWVQKYISLL-- 65 Query: 93 QTQTPK 98 +TPK Sbjct: 66 --KTPK 69 >4MHE-A nrPDB Length = 70 Score = 46.6 bits (109), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Query: 34 CCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHL 90 CC +T+ +I + + Y TS +CPK VI T ++ICADP +KWVQ + L Sbjct: 11 CCLVYTSWQIPQKFIVDYSE-TSPQCPKPGVILLTKRGRQICADPNKKWVQKYISDL 66 >5YAM-A nrPDB Length = 69 Score = 45.8 bits (107), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 1/58 (1%) Query: 34 CCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLD 91 CC+ + + + + Y TSSKC AV+F T +++CA+P++KWVQ+ +++L+ Sbjct: 11 CCFAYLSLALPRAHVKEYF-YTSSKCSNLAVVFVTRRNRQVCANPEKKWVQEYINYLE 67 >5UIW-B nrPDB Length = 75 Score = 45.4 bits (106), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Query: 33 TCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLD 91 +CC+ + R + + Y TS KC AV+F T +++CA+P++KWV++ ++ L+ Sbjct: 10 SCCFAYIARPLPRAHIKEYF-YTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLE 67 >5LTL-A nrPDB Length = 100 Score = 44.7 bits (104), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Query: 25 PDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQ 84 P+ +N P TCC + + + + + YR+ + P A+IF T +E+C +P WVQ Sbjct: 8 PEWVNTPSTCCLKYYEKVLPRRLVVGYRKALNCHLP--AIIFVTKRNREVCTNPNDDWVQ 65 Query: 85 DSM 87 + + Sbjct: 66 EYI 68 >2VXW-A nrPDB Length = 69 Score = 44.3 bits (103), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Query: 34 CCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLD 91 CC+ + R + + Y TS KC AV+F T +++CA+P++KWV++ ++ L+ Sbjct: 11 CCFAYIARPLPRAHIKEYF-YTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLE 67 >1EQT-A nrPDB Length = 68 Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Query: 34 CCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLD 91 CC+ + R + + Y TS KC AV+F T +++CA+P++KWV++ ++ L+ Sbjct: 10 CCFAYIARPMPRAHIKEYF-YTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLE 66 >1J9O-A nrPDB Length = 93 Score = 42.4 bits (98), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 3/62 (4%) Query: 35 CYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQT 94 C + T +++ V R+ +Y T ++ AVIF T ++CADP+ WV+D + +D+++ Sbjct: 11 CVSLTTQRLPVSRIKTY---TITEGSLRAVIFITKRGLKVCADPQATWVRDVVRSMDRKS 67 Query: 95 QT 96 T Sbjct: 68 NT 69 >1NR4-A nrPDB Length = 71 Score = 42.0 bits (97), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 27 AINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDS 86 N CC + I +++L ++ + TS C ++A++F T+ + IC+DP K V+++ Sbjct: 3 GTNVGRECCLEYFKGAIPLRKLKTWYQ-TSEDCSRDAIVFVTVQGRAICSDPNNKRVKNA 61 Query: 87 MDHL 90 + +L Sbjct: 62 VKYL 65 >2HCC-A nrPDB Length = 66 Score = 42.0 bits (97), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 34 CCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHL 90 CC ++ ++ I + SY TSS+C K VIF T +++CA P VQD M L Sbjct: 6 CCTSYISQSIPCSLMKSYFE-TSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKL 61 >1G91-A nrPDB Length = 77 Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Query: 34 CCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQ 93 CC ++T R I L SY T+S+C K VIF T + CA+P K VQ M L Sbjct: 11 CCISYTPRSIPCSLLESYFE-TNSECSKPGVIFLTKKGRRFCANPSDKQVQVCMRMLKLD 69 Query: 94 TQ 95 T+ Sbjct: 70 TR 71 >4OIK-A nrPDB Length = 74 Score = 40.0 bits (92), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 34 CCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQ 84 CC++F ++I ++ + YR TSS C E +IFK KE CA WVQ Sbjct: 11 CCFSFAEQEIPLRAILCYRN-TSSICSNEGLIFKLKRGKEACALDTVGWVQ 60 >2JYO-A nrPDB Length = 70 Score = 40.0 bits (92), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 34 CCYNFTNRKISVQRLASY-RRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDK 92 CC +T+R + + + + R++ + C A+IF T +CA+PKQ WV+ + L K Sbjct: 6 CCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVRLLSK 65 Query: 93 QTQT 96 + + Sbjct: 66 KVKN 69 >1HHV-A nrPDB Length = 74 Score = 40.0 bits (92), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%) Query: 27 AINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDS 86 + + P CC + R + L+S+ TS C K VIF T +++CAD + WV+ Sbjct: 7 SWHRPDKCCLGYQKRPLPQVLLSSWY-PTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKL 65 Query: 87 MDHL 90 M L Sbjct: 66 MQQL 69 >4RWS-C nrPDB Length = 80 Score = 39.7 bits (91), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Query: 27 AINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDS 86 + + P CC + R + L+S+ TS C K VIF T +++CAD + WV+ Sbjct: 4 SCHRPDKCCLGYQKRPLPQVLLSSWY-PTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKL 62 Query: 87 MDHLDKQTQTP 97 M L + P Sbjct: 63 MQQLPVTARYP 73 >1HA6-A nrPDB Length = 70 Score = 39.3 bits (90), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Query: 34 CCYNFTNRKISVQRLASY-RRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHL 90 CC ++ + + + + R++ C A+IF T K +CADPKQ WV+ +++ L Sbjct: 6 CCLSYIQTPLPSRAIVGFTRQMADEACDINAIIFHTKKRKSVCADPKQNWVKRAVNLL 63 >5L7M-A nrPDB Length = 88 Score = 35.4 bits (80), Expect = 0.006, Method: Compositional matrix adjust. Identities = 13/39 (33%), Positives = 23/39 (58%) Query: 56 SSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQT 94 + CPK V+ T + K IC +P+ KW+Q + H+ ++ Sbjct: 35 GNGCPKTEVVIWTKMKKVICVNPRAKWLQRLLRHVQSKS 73 >2MP1-A nrPDB Length = 77 Score = 33.9 bits (76), Expect = 0.018, Method: Compositional matrix adjust. Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Query: 27 AINAPVTCCYNFTNRKISVQRLASYRRI-TSSKCPKEAVIFKTIVAKEICADPKQKWVQD 85 N CC + T + I + ++ + C AV+F T+ +++CA P Q WV+ Sbjct: 1 GTNDAEDCCLSVTQKPIPGYIVRNFHYLLIKDGCRVPAVVFTTLRGRQLCAPPDQPWVER 60 Query: 86 SMDHLDK 92 + L + Sbjct: 61 IIQRLQR 67 >4XDX-A nrPDB Length = 70 Score = 30.8 bits (68), Expect = 0.14, Method: Compositional matrix adjust. Identities = 12/42 (28%), Positives = 21/42 (50%) Query: 55 TSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQTQT 96 + C +I K +E+C DPK+ WVQ ++ K+ + Sbjct: 28 SGPHCANTEIIVKLSDGRELCLDPKENWVQRVVEKFLKRAEN 69 >5CBA-E nrPDB Length = 88 Score = 30.4 bits (67), Expect = 0.19, Method: Compositional matrix adjust. Identities = 11/41 (26%), Positives = 23/41 (56%) Query: 56 SSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQTQT 96 + CP++ +I +C DP+ +W+Q M+ L K++ + Sbjct: 36 GNGCPRKEIIVWKKNKSIVCVDPQAEWIQRMMEVLRKRSSS 76 >6EHZ-A nrPDB Length = 98 Score = 26.9 bits (58), Expect = 2.0, Method: Compositional matrix adjust. Identities = 7/17 (41%), Positives = 14/17 (82%) Query: 72 KEICADPKQKWVQDSMD 88 +++C DPK KW+Q+ ++ Sbjct: 47 RQVCIDPKLKWIQEYLE 63 >4LMQ-D nrPDB Length = 61 Score = 26.9 bits (58), Expect = 2.1, Method: Compositional matrix adjust. Identities = 7/17 (41%), Positives = 14/17 (82%) Query: 72 KEICADPKQKWVQDSMD 88 +++C DPK KW+Q+ ++ Sbjct: 40 RQVCIDPKLKWIQEYLE 56 >2K04-A nrPDB Length = 70 Score = 26.9 bits (58), Expect = 2.1, Method: Compositional matrix adjust. Identities = 7/17 (41%), Positives = 14/17 (82%) Query: 72 KEICADPKQKWVQDSMD 88 +++C DPK KW+Q+ ++ Sbjct: 49 RQVCIDPKLKWIQEYLE 65 >2N55-A nrPDB Length = 70 Score = 25.0 bits (53), Expect = 7.1, Method: Compositional matrix adjust. Identities = 7/17 (41%), Positives = 13/17 (76%) Query: 72 KEICADPKQKWVQDSMD 88 +++C DPK KW Q+ ++ Sbjct: 49 RQVCIDPKCKWCQEYLE 65 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1NCV-A nrPDB 108 4e-25 1DOL-A nrPDB 108 6e-25 1ESR-A nrPDB 105 3e-24 2RA4-A nrPDB 103 2e-23 1EOT-A nrPDB 97 2e-21 4ZKB-B nrPDB 96 4e-21 2X6L-A nrPDB 95 5e-21 4ZLT-F nrPDB 95 8e-21 2Q8R-E nrPDB 90 1e-19 2Q8T-A nrPDB 90 2e-19 4RWS-C nrPDB 90 3e-19 1HHV-A nrPDB 88 6e-19 5LTL-A nrPDB 87 2e-18 5YAM-A nrPDB 84 1e-17 1EIG-A nrPDB 84 1e-17 1EQT-A nrPDB 84 2e-17 5UIW-B nrPDB 83 2e-17 2VXW-A nrPDB 83 3e-17 1ZXT-A nrPDB 82 6e-17 4MHE-A nrPDB 82 6e-17 5WB2-B nrPDB 81 1e-16 1G91-A nrPDB 81 1e-16 1G2S-A nrPDB 80 1e-16 2JYO-A nrPDB 78 1e-15 1NR4-A nrPDB 77 2e-15 1HA6-A nrPDB 75 5e-15 2HCC-A nrPDB 75 5e-15 4XT3-B nrPDB 75 7e-15 1J9O-A nrPDB 73 3e-14 5EKI-A nrPDB 72 6e-14 2L4N-A nrPDB 70 2e-13 4OIK-A nrPDB 67 2e-12 Sequences not found previously or not previously below threshold: 2MP1-A nrPDB 63 4e-11 4XDX-A nrPDB 47 3e-06 5CBA-E nrPDB 37 0.001 5L7M-A nrPDB 37 0.002 6CWS-A nrPDB 37 0.003 6EHZ-A nrPDB 36 0.003 1ROD-A nrPDB 35 0.008 4LMQ-D nrPDB 34 0.015 2K04-A nrPDB 32 0.046 4HCS-A nrPDB 32 0.064 2N55-A nrPDB 32 0.073 2MGS-A nrPDB 30 0.18 1F9P-A nrPDB 30 0.19 1MI2-A nrPDB 30 0.27 1NAP-A nrPDB 30 0.34 1PLF-A nrPDB 28 0.72 1MSH-A nrPDB 28 0.84 2A6A-A nrPDB 28 1.1 1RJT-A nrPDB 26 3.0 1PFN-A nrPDB 26 4.1 1Y8C-A nrPDB 26 4.7 5OB5-A nrPDB 26 4.9 1LV9-A nrPDB 25 7.8 5ZDH-P nrPDB 25 9.0 >1NCV-A nrPDB Length = 76 Score = 108 bits (271), Expect = 4e-25, Method: Composition-based stats. Identities = 54/75 (72%), Positives = 58/75 (77%) Query: 24 QPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWV 83 QP IN TCCY F N+KI QRL SYRR TSS CP+EAVIFKT + KEICADP QKWV Sbjct: 1 QPVGINTSTTCCYRFINKKIPKQRLESYRRTTSSHCPREAVIFKTKLDKEICADPTQKWV 60 Query: 84 QDSMDHLDKQTQTPK 98 QD M HLDK+TQTPK Sbjct: 61 QDFMKHLDKKTQTPK 75 >1DOL-A nrPDB Length = 77 Score = 108 bits (269), Expect = 6e-25, Method: Composition-based stats. Identities = 76/76 (100%), Positives = 76/76 (100%) Query: 24 QPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWV 83 QPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWV Sbjct: 2 QPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWV 61 Query: 84 QDSMDHLDKQTQTPKT 99 QDSMDHLDKQTQTPKT Sbjct: 62 QDSMDHLDKQTQTPKT 77 >1ESR-A nrPDB Length = 76 Score = 105 bits (263), Expect = 3e-24, Method: Composition-based stats. Identities = 47/75 (62%), Positives = 60/75 (80%) Query: 24 QPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWV 83 QPD+++ P+TCC+N NRKI +QRL SY RIT+ +CPKEAVIFKT KE+CADPK++WV Sbjct: 1 QPDSVSIPITCCFNVINRKIPIQRLESYTRITNIQCPKEAVIFKTQRGKEVCADPKERWV 60 Query: 84 QDSMDHLDKQTQTPK 98 +DSM HLD+ Q K Sbjct: 61 RDSMKHLDQIFQNLK 75 >2RA4-A nrPDB Length = 76 Score = 103 bits (256), Expect = 2e-23, Method: Composition-based stats. Identities = 46/76 (60%), Positives = 62/76 (81%), Gaps = 1/76 (1%) Query: 24 QPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWV 83 QPDA+N P TCC+ F+++KIS+QRL SY IT+S+CP++AVIF+T + KEICADPK+KWV Sbjct: 2 QPDALNVPSTCCFTFSSKKISLQRLKSYV-ITTSRCPQKAVIFRTKLGKEICADPKEKWV 60 Query: 84 QDSMDHLDKQTQTPKT 99 Q+ M HL ++ T KT Sbjct: 61 QNYMKHLGRKAHTLKT 76 >1EOT-A nrPDB Length = 74 Score = 97.0 bits (240), Expect = 2e-21, Method: Composition-based stats. Identities = 48/71 (67%), Positives = 60/71 (84%) Query: 28 INAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSM 87 + P TCC+N NRKI +QRL SYRRITS KCP++AVIFKT +AK+ICADPK+KWVQDSM Sbjct: 3 ASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSM 62 Query: 88 DHLDKQTQTPK 98 +LD+++ TPK Sbjct: 63 KYLDQKSPTPK 73 >4ZKB-B nrPDB Length = 75 Score = 95.9 bits (237), Expect = 4e-21, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Query: 27 AINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDS 86 A + P CC+++T+R+I +A Y TSS+C K VIF T ++++CADP ++WVQ Sbjct: 3 AADTPTACCFSYTSRQIPQNFIADYFE-TSSQCSKPGVIFLTKRSRQVCADPSEEWVQKY 61 Query: 87 MDHLDKQT 94 + L+ Sbjct: 62 VSDLELSA 69 >2X6L-A nrPDB Length = 69 Score = 95.1 bits (235), Expect = 5e-21, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%) Query: 25 PDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQ 84 P + P CC+++T RK+ + Y TSS C + AV+F+T +K++CADP + WVQ Sbjct: 2 PMGSDPPTACCFSYTARKLPRNFVVDYYE-TSSLCSQPAVVFQTKRSKQVCADPSESWVQ 60 Query: 85 DSMDHLD 91 + + L+ Sbjct: 61 EYVYDLE 67 >4ZLT-F nrPDB Length = 70 Score = 94.7 bits (234), Expect = 8e-21, Method: Composition-based stats. Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%) Query: 25 PDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQ 84 P + P CC+++ +RKI Q + +Y TSS C + VIF T ++ICAD K+ WVQ Sbjct: 3 PYGADTPTACCFSY-SRKIPRQFIVAYFE-TSSLCSQPGVIFLTKRNRQICADSKETWVQ 60 Query: 85 DSMDHLDKQT 94 + + L+ Sbjct: 61 EYITDLELNA 70 >2Q8R-E nrPDB Length = 66 Score = 90.5 bits (223), Expect = 1e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 27 AINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDS 86 P CC+ +T KI QR+ Y T+S+C K ++F T +C +P KWVQD Sbjct: 1 GPYHPSECCFTYTTYKIPRQRIMDYYE-TNSQCSKPGIVFITKRGHSVCTNPSDKWVQDY 59 Query: 87 MDHLD 91 + + Sbjct: 60 IKDMK 64 >2Q8T-A nrPDB Length = 74 Score = 90.1 bits (222), Expect = 2e-19, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 27 AINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDS 86 P CC+ +T KI QR+ Y T+S+C K ++F T +C +P KWVQD Sbjct: 9 GPYHPSECCFTYTTYKIPRQRIMDYYE-TNSQCSKPGIVFITKRGHSVCTNPSDKWVQDY 67 Query: 87 MDHLD 91 + + Sbjct: 68 IKDMK 72 >4RWS-C nrPDB Length = 80 Score = 89.7 bits (221), Expect = 3e-19, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Query: 27 AINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDS 86 + + P CC + R + L+S+ TS C K VIF T +++CAD + WV+ Sbjct: 4 SCHRPDKCCLGYQKRPLPQVLLSSWY-PTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKL 62 Query: 87 MDHLDKQTQTP 97 M L + P Sbjct: 63 MQQLPVTARYP 73 >1HHV-A nrPDB Length = 74 Score = 88.2 bits (217), Expect = 6e-19, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 27 AINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDS 86 + + P CC + R + L+S+ TS C K VIF T +++CAD + WV+ Sbjct: 7 SWHRPDKCCLGYQKRPLPQVLLSSWY-PTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKL 65 Query: 87 MDHLDKQTQ 95 M L + Sbjct: 66 MQQLPVTAR 74 >5LTL-A nrPDB Length = 100 Score = 87.0 bits (214), Expect = 2e-18, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Query: 25 PDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQ 84 P+ +N P TCC + + + + + YR+ + C A+IF T +E+C +P WVQ Sbjct: 8 PEWVNTPSTCCLKYYEKVLPRRLVVGYRKALN--CHLPAIIFVTKRNREVCTNPNDDWVQ 65 Query: 85 DSMDH 89 + + Sbjct: 66 EYIKD 70 >5YAM-A nrPDB Length = 69 Score = 84.3 bits (207), Expect = 1e-17, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Query: 25 PDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQ 84 P + CC+ + + + + Y TSSKC AV+F T +++CA+P++KWVQ Sbjct: 3 PYGSDT-TPCCFAYLSLALPRAHVKEYF-YTSSKCSNLAVVFVTRRNRQVCANPEKKWVQ 60 Query: 85 DSMDHLD 91 + +++L+ Sbjct: 61 EYINYLE 67 >1EIG-A nrPDB Length = 73 Score = 83.9 bits (206), Expect = 1e-17, Method: Composition-based stats. Identities = 26/66 (39%), Positives = 38/66 (57%) Query: 30 APVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDH 89 P CC F +++I R+ SY+ + S C K VIF T ++ C DPKQ+WVQ M + Sbjct: 3 IPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQSCGDPKQEWVQRYMKN 62 Query: 90 LDKQTQ 95 LD + + Sbjct: 63 LDAKQK 68 >1EQT-A nrPDB Length = 68 Score = 83.5 bits (205), Expect = 2e-17, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%) Query: 32 VTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLD 91 CC+ + R + + Y TS KC AV+F T +++CA+P++KWV++ ++ L+ Sbjct: 8 TPCCFAYIARPMPRAHIKEYF-YTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLE 66 >5UIW-B nrPDB Length = 75 Score = 83.2 bits (204), Expect = 2e-17, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 1/59 (1%) Query: 33 TCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLD 91 +CC+ + R + + Y TS KC AV+F T +++CA+P++KWV++ ++ L+ Sbjct: 10 SCCFAYIARPLPRAHIKEYF-YTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLE 67 >2VXW-A nrPDB Length = 69 Score = 82.8 bits (203), Expect = 3e-17, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%) Query: 32 VTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLD 91 CC+ + R + + Y TS KC AV+F T +++CA+P++KWV++ ++ L+ Sbjct: 9 SACCFAYIARPLPRAHIKEYF-YTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLE 67 >1ZXT-A nrPDB Length = 76 Score = 81.6 bits (200), Expect = 6e-17, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 28 INAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSM 87 P +CCY F VQ L + TS CPK VI T ++ICADP + WV+ M Sbjct: 5 SYTPNSCCYGFQQHPPPVQILKEWY-PTSPACPKPGVILLTKRGRQICADPSKNWVRQLM 63 Query: 88 DHLD 91 L Sbjct: 64 QRLP 67 >4MHE-A nrPDB Length = 70 Score = 81.6 bits (200), Expect = 6e-17, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Query: 34 CCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQ 93 CC +T+ +I + + Y TS +CPK VI T ++ICADP +KWVQ + L Sbjct: 11 CCLVYTSWQIPQKFIVDYSE-TSPQCPKPGVILLTKRGRQICADPNKKWVQKYISDLKLN 69 Query: 94 T 94 Sbjct: 70 A 70 >5WB2-B nrPDB Length = 76 Score = 80.9 bits (198), Expect = 1e-16, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 3/70 (4%) Query: 25 PDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQ 84 P A +TC + KI V L Y++ +S C K A+I +T + CADPK++WV+ Sbjct: 3 PHANYCAITC--SKMTSKIPVALLIHYQQNQAS-CGKRAIILETRQHRLFCADPKEQWVK 59 Query: 85 DSMDHLDKQT 94 D+M HLD+Q Sbjct: 60 DAMQHLDRQA 69 >1G91-A nrPDB Length = 77 Score = 80.9 bits (198), Expect = 1e-16, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Query: 30 APVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDH 89 CC ++T R I L SY T+S+C K VIF T + CA+P K VQ M Sbjct: 7 TSADCCISYTPRSIPCSLLESYFE-TNSECSKPGVIFLTKKGRRFCANPSDKQVQVCMRM 65 Query: 90 LDKQTQ 95 L T+ Sbjct: 66 LKLDTR 71 >1G2S-A nrPDB Length = 71 Score = 80.5 bits (197), Expect = 1e-16, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 5/72 (6%) Query: 27 AINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDS 86 + TCC+ ++++ + + SY TS+ C + AVIF T K++C P++KWVQ Sbjct: 3 GSDISKTCCFQYSHKPLPWTWVRSY-EFTSNSCSQRAVIFTTKRGKKVCTHPRKKWVQKY 61 Query: 87 MDHLDKQTQTPK 98 + L +TPK Sbjct: 62 ISLL----KTPK 69 >2JYO-A nrPDB Length = 70 Score = 77.8 bits (190), Expect = 1e-15, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 34 CCYNFTNRKISVQRLASY-RRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDK 92 CC +T+R + + + + R++ + C A+IF T +CA+PKQ WV+ + L K Sbjct: 6 CCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVRLLSK 65 Query: 93 QTQT 96 + + Sbjct: 66 KVKN 69 >1NR4-A nrPDB Length = 71 Score = 76.6 bits (187), Expect = 2e-15, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Query: 27 AINAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDS 86 N CC + I +++L ++ + TS C ++A++F T+ + IC+DP K V+++ Sbjct: 3 GTNVGRECCLEYFKGAIPLRKLKTWYQ-TSEDCSRDAIVFVTVQGRAICSDPNNKRVKNA 61 Query: 87 MDHL 90 + +L Sbjct: 62 VKYL 65 >1HA6-A nrPDB Length = 70 Score = 75.5 bits (184), Expect = 5e-15, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 34 CCYNFTNRKISVQRLASY-RRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDK 92 CC ++ + + + + R++ C A+IF T K +CADPKQ WV+ +++ L Sbjct: 6 CCLSYIQTPLPSRAIVGFTRQMADEACDINAIIFHTKKRKSVCADPKQNWVKRAVNLLSL 65 Query: 93 QTQ 95 + + Sbjct: 66 RVK 68 >2HCC-A nrPDB Length = 66 Score = 75.5 bits (184), Expect = 5e-15, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Query: 29 NAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMD 88 + CC ++ ++ I + SY TSS+C K VIF T +++CA P VQD M Sbjct: 1 HFAADCCTSYISQSIPCSLMKSYFE-TSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMK 59 Query: 89 HLD 91 L Sbjct: 60 KLK 62 >4XT3-B nrPDB Length = 91 Score = 75.1 bits (183), Expect = 7e-15, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 3/67 (4%) Query: 28 INAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSM 87 +TC + KI V L Y++ +S C K A+I +T + CADPK++WV+D+M Sbjct: 6 TKCNITC--SKMTSKIPVALLIHYQQNQAS-CGKRAIILETRQHRLFCADPKEQWVKDAM 62 Query: 88 DHLDKQT 94 HLD+Q Sbjct: 63 QHLDRQA 69 >1J9O-A nrPDB Length = 93 Score = 73.1 bits (178), Expect = 3e-14, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 3/62 (4%) Query: 35 CYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQT 94 C + T +++ V R+ +Y T ++ AVIF T ++CADP+ WV+D + +D+++ Sbjct: 11 CVSLTTQRLPVSRIKTY---TITEGSLRAVIFITKRGLKVCADPQATWVRDVVRSMDRKS 67 Query: 95 QT 96 T Sbjct: 68 NT 69 >5EKI-A nrPDB Length = 79 Score = 72.0 bits (175), Expect = 6e-14, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 3/63 (4%) Query: 34 CCYNFTNRKISVQRLASYRRITSS-KCPKEAVIFKTIV--AKEICADPKQKWVQDSMDHL 90 CC ++ RKI + + SYR+ S C A++F E+CADPK+ WVQ M HL Sbjct: 8 CCLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELWVQQLMQHL 67 Query: 91 DKQ 93 DK Sbjct: 68 DKT 70 >2L4N-A nrPDB Length = 113 Score = 70.1 bits (170), Expect = 2e-13, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 3/63 (4%) Query: 34 CCYNFTNRKISVQRLASYRRITSS-KCPKEAVIFKTIV--AKEICADPKQKWVQDSMDHL 90 CC ++ RKI + + SYR+ S C A++F E+CADPK+ WVQ M HL Sbjct: 8 CCLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELWVQQLMQHL 67 Query: 91 DKQ 93 DK Sbjct: 68 DKT 70 >4OIK-A nrPDB Length = 74 Score = 66.6 bits (161), Expect = 2e-12, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Query: 32 VTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHL 90 CC++F ++I ++ + YR TSS C E +IFK KE CA WVQ L Sbjct: 9 SRCCFSFAEQEIPLRAILCYRN-TSSICSNEGLIFKLKRGKEACALDTVGWVQRHRKML 66 >2MP1-A nrPDB Length = 77 Score = 62.7 bits (151), Expect = 4e-11, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 1/73 (1%) Query: 27 AINAPVTCCYNFTNRKISVQRLASY-RRITSSKCPKEAVIFKTIVAKEICADPKQKWVQD 85 N CC + T + I + ++ + C AV+F T+ +++CA P Q WV+ Sbjct: 1 GTNDAEDCCLSVTQKPIPGYIVRNFHYLLIKDGCRVPAVVFTTLRGRQLCAPPDQPWVER 60 Query: 86 SMDHLDKQTQTPK 98 + L + + K Sbjct: 61 IIQRLQRTSAKMK 73 >4XDX-A nrPDB Length = 70 Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 35 CYNFTNRKISVQRLASYRRITS-SKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQ 93 C ++ + + R I S C +I K +E+C DPK+ WVQ ++ K+ Sbjct: 7 CIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPKENWVQRVVEKFLKR 66 Query: 94 TQT 96 + Sbjct: 67 AEN 69 >5CBA-E nrPDB Length = 88 Score = 37.3 bits (85), Expect = 0.001, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 35 CYNFTNRKISVQRLASYR-RITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQ 93 C ++ I + + + + CP++ +I +C DP+ +W+Q M+ L K+ Sbjct: 14 CVQESSVFIPRRFIDRIQILPRGNGCPRKEIIVWKKNKSIVCVDPQAEWIQRMMEVLRKR 73 Query: 94 TQT 96 + + Sbjct: 74 SSS 76 >5L7M-A nrPDB Length = 88 Score = 36.6 bits (83), Expect = 0.002, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 23/38 (60%) Query: 57 SKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQT 94 + CPK V+ T + K IC +P+ KW+Q + H+ ++ Sbjct: 36 NGCPKTEVVIWTKMKKVICVNPRAKWLQRLLRHVQSKS 73 >6CWS-A nrPDB Length = 108 Score = 36.6 bits (83), Expect = 0.003, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 4/62 (6%) Query: 30 APVTCCYN---FTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDS 86 +CC +R++ + + C AVI + IC P V+ Sbjct: 7 IASSCCTEVSHHISRRLLERVNMCRIQRADGDCDLAAVILHVKR-RRICVSPHNHTVKQW 65 Query: 87 MD 88 M Sbjct: 66 MK 67 >6EHZ-A nrPDB Length = 98 Score = 36.2 bits (82), Expect = 0.003, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 25/55 (45%) Query: 34 CCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMD 88 C F I+ + + + + C + V +++C DPK KW+Q+ ++ Sbjct: 9 CPCRFFESHIARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKLKWIQEYLE 63 >1ROD-A nrPDB Length = 72 Score = 35.0 bits (79), Expect = 0.008, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 1/57 (1%) Query: 35 CYNFTNRKISVQRLASYRRITS-SKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHL 90 C ++ + + R I S C +I K +E+C DP V+ ++ + Sbjct: 9 CIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPASPIVKKIIEKM 65 >4LMQ-D nrPDB Length = 61 Score = 33.9 bits (76), Expect = 0.015, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 25/55 (45%) Query: 34 CCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMD 88 C F ++ + + + + C + V +++C DPK KW+Q+ ++ Sbjct: 2 CPCRFFESHVARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKLKWIQEYLE 56 >2K04-A nrPDB Length = 70 Score = 32.3 bits (72), Expect = 0.046, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 25/55 (45%) Query: 34 CCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMD 88 C F ++ + + + + C + V +++C DPK KW+Q+ ++ Sbjct: 11 CPCRFFESHVARANVKHLKILNTPNCACQIVARLKNNNRQVCIDPKLKWIQEYLE 65 >4HCS-A nrPDB Length = 81 Score = 31.9 bits (71), Expect = 0.064, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 1/68 (1%) Query: 29 NAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMD 88 N P C T ++ Y ++ C K V+F + C DP W+ + + Sbjct: 10 NRPGVCFKVLTTKEPKANIKRCYNLPKTNNCLK-CVLFVDASNRMKCIDPNASWLAERLY 68 Query: 89 HLDKQTQT 96 L ++ T Sbjct: 69 RLKEKGVT 76 >2N55-A nrPDB Length = 70 Score = 31.5 bits (70), Expect = 0.073, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 24/55 (43%) Query: 34 CCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMD 88 C F ++ + + + + C + V +++C DPK KW Q+ ++ Sbjct: 11 CPCRFFESHVARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKCKWCQEYLE 65 >2MGS-A nrPDB Length = 78 Score = 30.4 bits (67), Expect = 0.18, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 17/34 (50%) Query: 57 SKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHL 90 +C K V+ KEIC DP+ +++ + + Sbjct: 37 PQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 70 >1F9P-A nrPDB Length = 85 Score = 30.4 bits (67), Expect = 0.19, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 14/32 (43%) Query: 57 SKCPKEAVIFKTIVAKEICADPKQKWVQDSMD 88 + C + VI ++IC DP ++ + Sbjct: 44 THCNQVEVIATLKDGRKICLDPDAPRIKKIVQ 75 >1MI2-A nrPDB Length = 73 Score = 30.0 bits (66), Expect = 0.27, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 17/39 (43%) Query: 57 SKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHLDKQTQ 95 C + VI +++C DP+ VQ + + + + Sbjct: 33 PHCAQTEVIATLKGGQKVCLDPEAPLVQKIIQKILNKGK 71 >1NAP-A nrPDB Length = 70 Score = 29.6 bits (65), Expect = 0.34, Method: Composition-based stats. Identities = 7/32 (21%), Positives = 14/32 (43%) Query: 57 SKCPKEAVIFKTIVAKEICADPKQKWVQDSMD 88 + C + VI ++IC DP ++ + Sbjct: 29 THCNQVEVIATLKDGRKICLDPDAPRIKKIVQ 60 >1PLF-A nrPDB Length = 72 Score = 28.5 bits (62), Expect = 0.72, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 17/56 (30%) Query: 35 CYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHL 90 C T+ + CP +I ++IC D + + + L Sbjct: 14 CLKTTSGINPRHISSLEVIGAGLHCPSPQLIATLKTGRKICLDQQNPLYKKIIKRL 69 >1MSH-A nrPDB Length = 72 Score = 28.1 bits (61), Expect = 0.84, Method: Composition-based stats. Identities = 7/56 (12%), Positives = 17/56 (30%) Query: 35 CYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHL 90 C + + C + VI ++ C +P V+ ++ + Sbjct: 11 CLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKM 66 >2A6A-A nrPDB Length = 218 Score = 27.7 bits (60), Expect = 1.1, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 4/37 (10%) Query: 43 ISVQRLASYRRITSSKCPKEAVIFKTIVAKE---ICA 76 I V L S+ +T+ CP + V+ A++ CA Sbjct: 98 IPVAPLNSF-EMTAKSCPADGVVLVARRARKGYHYCA 133 >1RJT-A nrPDB Length = 73 Score = 26.2 bits (56), Expect = 3.0, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Query: 56 SSKCPKEAVIFKTIVAK-EICADPKQKWVQDSMDHLDKQ 93 S+ C K VI K + C +PK K + + ++++ Sbjct: 33 SNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKKVERK 71 >1PFN-A nrPDB Length = 68 Score = 25.8 bits (55), Expect = 4.1, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 18/56 (32%) Query: 35 CYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHL 90 C T++ + CP +I ++IC D + + + L Sbjct: 10 CVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQAPLYKKIIKKL 65 >1Y8C-A nrPDB Length = 246 Score = 25.8 bits (55), Expect = 4.7, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%) Query: 32 VTCCYNFTNRKISVQRLASYRRITSSKCPKEAV-IF 66 +TCC + TN I L Y + S+ + V IF Sbjct: 105 ITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF 140 >5OB5-A nrPDB Length = 63 Score = 25.8 bits (55), Expect = 4.9, Method: Composition-based stats. Identities = 6/34 (17%), Positives = 14/34 (41%) Query: 57 SKCPKEAVIFKTIVAKEICADPKQKWVQDSMDHL 90 C + VI ++ C +P V+ ++ + Sbjct: 28 PHCAQTEVIATLKNGQKACLNPASPMVKKIIEKM 61 >1LV9-A nrPDB Length = 77 Score = 25.0 bits (53), Expect = 7.8, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 35 CYNFTNRKI-SVQRLASYRRITSSKCPKEAVIFK-TIVAKEICADPKQKWVQDSMDHLDK 92 C + +N+ + S CP+ +I ++ C +P+ K +++ + + K Sbjct: 11 CISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPESKAIKNLLKAVSK 70 Query: 93 Q 93 + Sbjct: 71 E 71 >5ZDH-P nrPDB Length = 112 Score = 24.6 bits (52), Expect = 9.0, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 10/16 (62%) Query: 66 FKTIVAKEICADPKQK 81 F T +++CADP K Sbjct: 61 FLTSYQRQMCADPTVK 76 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.137 0.443 Lambda K H 0.267 0.0419 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,869,359 Number of Sequences: 36641 Number of extensions: 126847 Number of successful extensions: 368 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 233 Number of HSP's gapped (non-prelim): 97 length of query: 99 length of database: 10,336,785 effective HSP length: 67 effective length of query: 32 effective length of database: 7,881,838 effective search space: 252218816 effective search space used: 252218816 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 52 (24.6 bits)