BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P12956
         (609 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

1JEY-A nrPDB                                                         1251   0.0  
6ERG-A nrPDB                                                         1117   0.0  
5Y58-A nrPDB                                                           56   4e-08
5Y58-B nrPDB                                                           39   0.009
1S7Z-A nrPDB                                                           31   1.8  
5TXC-A nrPDB                                                           29   5.2  
4MB8-A nrPDB                                                           29   7.3  

>1JEY-A nrPDB
          Length = 609

 Score = 1251 bits (3237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 609/609 (100%), Positives = 609/609 (100%)

Query: 1   MSGWESYYKTEGDEEAEEEQEENLEASGDYKYSGRDSLIFLVDASKAMFESQSEDELTPF 60
           MSGWESYYKTEGDEEAEEEQEENLEASGDYKYSGRDSLIFLVDASKAMFESQSEDELTPF
Sbjct: 1   MSGWESYYKTEGDEEAEEEQEENLEASGDYKYSGRDSLIFLVDASKAMFESQSEDELTPF 60

Query: 61  DMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGAKRILELD 120
           DMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGAKRILELD
Sbjct: 61  DMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGAKRILELD 120

Query: 121 QFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDS 180
           QFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDS
Sbjct: 121 QFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDS 180

Query: 181 AKASRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEESSKLE 240
           AKASRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEESSKLE
Sbjct: 181 AKASRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEESSKLE 240

Query: 241 DLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKT 300
           DLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKT
Sbjct: 241 DLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKT 300

Query: 301 RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHH 360
           RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHH
Sbjct: 301 RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHH 360

Query: 361 YLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEEL 420
           YLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEEL
Sbjct: 361 YLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEEL 420

Query: 421 DDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQVGKMKAIVEKLRFTYRSDSFEN 480
           DDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQVGKMKAIVEKLRFTYRSDSFEN
Sbjct: 421 DDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQVGKMKAIVEKLRFTYRSDSFEN 480

Query: 481 PVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYPPDYNPEGKV 540
           PVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYPPDYNPEGKV
Sbjct: 481 PVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYPPDYNPEGKV 540

Query: 541 TKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFTVPMLKEACRAYGLKSGLKKQELL 600
           TKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFTVPMLKEACRAYGLKSGLKKQELL
Sbjct: 541 TKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFTVPMLKEACRAYGLKSGLKKQELL 600

Query: 601 EALTKHFQD 609
           EALTKHFQD
Sbjct: 601 EALTKHFQD 609


>6ERG-A nrPDB
          Length = 544

 Score = 1117 bits (2888), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 544/544 (100%), Positives = 544/544 (100%)

Query: 1   MSGWESYYKTEGDEEAEEEQEENLEASGDYKYSGRDSLIFLVDASKAMFESQSEDELTPF 60
           MSGWESYYKTEGDEEAEEEQEENLEASGDYKYSGRDSLIFLVDASKAMFESQSEDELTPF
Sbjct: 1   MSGWESYYKTEGDEEAEEEQEENLEASGDYKYSGRDSLIFLVDASKAMFESQSEDELTPF 60

Query: 61  DMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGAKRILELD 120
           DMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGAKRILELD
Sbjct: 61  DMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGAKRILELD 120

Query: 121 QFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDS 180
           QFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDS
Sbjct: 121 QFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDS 180

Query: 181 AKASRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEESSKLE 240
           AKASRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEESSKLE
Sbjct: 181 AKASRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEESSKLE 240

Query: 241 DLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKT 300
           DLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKT
Sbjct: 241 DLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKT 300

Query: 301 RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHH 360
           RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHH
Sbjct: 301 RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHH 360

Query: 361 YLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEEL 420
           YLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEEL
Sbjct: 361 YLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEEL 420

Query: 421 DDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQVGKMKAIVEKLRFTYRSDSFEN 480
           DDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQVGKMKAIVEKLRFTYRSDSFEN
Sbjct: 421 DDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQVGKMKAIVEKLRFTYRSDSFEN 480

Query: 481 PVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYPPDYNPEGKV 540
           PVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYPPDYNPEGKV
Sbjct: 481 PVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYPPDYNPEGKV 540

Query: 541 TKRK 544
           TKRK
Sbjct: 541 TKRK 544


>5Y58-A nrPDB
          Length = 575

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 111/512 (21%), Positives = 199/512 (38%), Gaps = 71/512 (13%)

Query: 35  RDSLIFLVDASKAMFESQSEDEL-TPFDMSIQCIQSVYISKIISSDRDLLAVVFYGTEKD 93
            + ++F ++ S+ MF+  S+ E  +P    ++ +  +    +I+     +   FY   ++
Sbjct: 2   HEGILFCIELSETMFKESSDLEYKSPLLEILESLDELMSQLVITRPGTAIGCYFYYCNRE 61

Query: 94  KNSVNFKNIYVLQELDNPGAKRILEL------------DQFKGQQG----QKRFQDMMGH 137
                   ++ L++++    K++ +L            D F  QQ     Q R   +   
Sbjct: 62  DAKEGIYELFPLRDINATFMKKLNDLLEDLSSGRISLYDYFMFQQTGSEKQVRLSVLFTF 121

Query: 138 GSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPH-GNDSAKASRARTKAGDLRDT 196
             D  L E+           Q ++S+KR+ LFT+ D P    D  + +R R    DL D 
Sbjct: 122 MLDTFLEEIPG---------QKQLSNKRVFLFTDIDKPQEAQDIDERARLRRLTIDLFDN 172

Query: 197 GIFLDLMHL---KKPGGFDISLFYRDIISIA----EDEDLRVHFEESSKLEDLLRKVRAK 249
            +      +    KP  FD + FY DI+ +     E+  L   F+  S      + ++++
Sbjct: 173 KVNFATFFIGYADKP--FD-NEFYSDILQLGSHTNENTGLDSEFDGPSTKPIDAKYIKSR 229

Query: 250 ETRKRALSRLKLKL------NKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKT--- 300
             RK+ + R+  +         + ++ V  Y +          KL  E +E ++ +    
Sbjct: 230 ILRKKEVKRIMFQCPLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYE-HEDIRQEAYSK 288

Query: 301 RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETE---ELKRFDDPGLMLMGFKPLVLLK 357
           R F     G  +   T +   YG   I L   + +   E     D  L ++GF+     K
Sbjct: 289 RKFLNPITGEDVTGKTVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSS--K 346

Query: 358 KHHYLR---PSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALV 414
             HY      S F+ P+E+   GS    ++LL    +K+  A+     + N  P    L 
Sbjct: 347 SIHYFNNIDKSSFIVPDEAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLS 406

Query: 415 PQEEELDDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQ---VGKMKAIVE---- 467
           P         ++    GF L  +PF D+ RK P         E       MK + +    
Sbjct: 407 PSS-------VKDYNEGFYLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKVTQSIMG 459

Query: 468 --KLRFTYRSDSFENPVLQQHFRNLEALALDL 497
              LR  Y    F+NP+LQ+H++ L    L +
Sbjct: 460 YFNLRDGYNPSDFKNPLLQKHYKVLHDYLLQI 491


>5Y58-B nrPDB
          Length = 628

 Score = 38.5 bits (88), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 6/131 (4%)

Query: 322 YGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPEESLVIGSSTL 381
           YG+  ++L     ++      PGL L GF     L ++     S F+  +  L   S  +
Sbjct: 318 YGADYVVLPSVLVDQTVYESFPGLDLRGFLNREALPRYFLTSESSFITADTRLGCQSDLM 377

Query: 382 -FSALLIKCLEKEVAALCRYTPRRNIPPYFVALVP---QEEELDDQKIQVTPPGFQLVFL 437
            FSAL+   LE    A+ RY  +++      AL P   +   ++ +K  V      L  L
Sbjct: 378 AFSALVDVMLENRKIAVARYVSKKDSEVNMCALCPVLIEHSNINSEKKFVK--SLTLCRL 435

Query: 438 PFADDKRKMPF 448
           PFA+D+R   F
Sbjct: 436 PFAEDERVTDF 446


>1S7Z-A nrPDB
          Length = 117

 Score = 30.8 bits (68), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 192 DLRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEESSKLEDLLRKVRAKET 251
           D+RDT    D +H+       +  +Y DI S+   E + + FE+S  + D    +R  + 
Sbjct: 27  DIRDTDDLHDAIHMAADNA--VPHYYADIFSVMASEGIDLEFEDSGLMPDTKDVIRILQA 84

Query: 252 R 252
           R
Sbjct: 85  R 85


>5TXC-A nrPDB
          Length = 705

 Score = 29.3 bits (64), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 13/27 (48%), Positives = 18/27 (66%)

Query: 508 LPKVEAMNKRLGSLVDEFKELVYPPDY 534
           LPKVE +  R  + ++ F +LV PPDY
Sbjct: 399 LPKVERLTLRNRNGIEVFSDLVLPPDY 425


>4MB8-A nrPDB
          Length = 304

 Score = 28.9 bits (63), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 3/68 (4%)

Query: 480 NPVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYPPDYNPEGK 539
           +P +Q+   +++ L+L  +   + ++++LP +   N  +  +    KE V  P  NP GK
Sbjct: 232 SPSVQKTLYDIQVLSLSRVPEIEDMEISLPNIHYFNIDMSKMGLINKEEVLLPLDNPYGK 291

Query: 540 VT---KRK 544
           +T   KRK
Sbjct: 292 ITGTVKRK 299


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

1JEY-A nrPDB                                                         1006   0.0  
6ERG-A nrPDB                                                          880   0.0  
5Y58-A nrPDB                                                          589   e-168

Sequences not found previously or not previously below threshold:

6ERF-B nrPDB                                                           51   1e-06
5Y58-B nrPDB                                                           50   2e-06
1A8L-A nrPDB                                                           34   0.28 
1S7Z-A nrPDB                                                           33   0.39 
2AEV-A nrPDB                                                           32   0.63 
5TXC-A nrPDB                                                           31   1.5  
2FKN-A nrPDB                                                           30   3.3  
1TXK-A nrPDB                                                           29   8.5  
2F9G-A nrPDB                                                           29   8.6  

>1JEY-A nrPDB
          Length = 609

 Score = 1006 bits (2602), Expect = 0.0,   Method: Composition-based stats.
 Identities = 609/609 (100%), Positives = 609/609 (100%)

Query: 1   MSGWESYYKTEGDEEAEEEQEENLEASGDYKYSGRDSLIFLVDASKAMFESQSEDELTPF 60
           MSGWESYYKTEGDEEAEEEQEENLEASGDYKYSGRDSLIFLVDASKAMFESQSEDELTPF
Sbjct: 1   MSGWESYYKTEGDEEAEEEQEENLEASGDYKYSGRDSLIFLVDASKAMFESQSEDELTPF 60

Query: 61  DMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGAKRILELD 120
           DMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGAKRILELD
Sbjct: 61  DMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGAKRILELD 120

Query: 121 QFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDS 180
           QFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDS
Sbjct: 121 QFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDS 180

Query: 181 AKASRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEESSKLE 240
           AKASRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEESSKLE
Sbjct: 181 AKASRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEESSKLE 240

Query: 241 DLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKT 300
           DLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKT
Sbjct: 241 DLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKT 300

Query: 301 RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHH 360
           RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHH
Sbjct: 301 RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHH 360

Query: 361 YLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEEL 420
           YLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEEL
Sbjct: 361 YLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEEL 420

Query: 421 DDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQVGKMKAIVEKLRFTYRSDSFEN 480
           DDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQVGKMKAIVEKLRFTYRSDSFEN
Sbjct: 421 DDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQVGKMKAIVEKLRFTYRSDSFEN 480

Query: 481 PVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYPPDYNPEGKV 540
           PVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYPPDYNPEGKV
Sbjct: 481 PVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYPPDYNPEGKV 540

Query: 541 TKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFTVPMLKEACRAYGLKSGLKKQELL 600
           TKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFTVPMLKEACRAYGLKSGLKKQELL
Sbjct: 541 TKRKHDNEGSGSKRPKVEYSEEELKTHISKGTLGKFTVPMLKEACRAYGLKSGLKKQELL 600

Query: 601 EALTKHFQD 609
           EALTKHFQD
Sbjct: 601 EALTKHFQD 609


>6ERG-A nrPDB
          Length = 544

 Score =  880 bits (2274), Expect = 0.0,   Method: Composition-based stats.
 Identities = 544/544 (100%), Positives = 544/544 (100%)

Query: 1   MSGWESYYKTEGDEEAEEEQEENLEASGDYKYSGRDSLIFLVDASKAMFESQSEDELTPF 60
           MSGWESYYKTEGDEEAEEEQEENLEASGDYKYSGRDSLIFLVDASKAMFESQSEDELTPF
Sbjct: 1   MSGWESYYKTEGDEEAEEEQEENLEASGDYKYSGRDSLIFLVDASKAMFESQSEDELTPF 60

Query: 61  DMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGAKRILELD 120
           DMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGAKRILELD
Sbjct: 61  DMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGAKRILELD 120

Query: 121 QFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDS 180
           QFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDS
Sbjct: 121 QFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPHGNDS 180

Query: 181 AKASRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEESSKLE 240
           AKASRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEESSKLE
Sbjct: 181 AKASRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEESSKLE 240

Query: 241 DLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKT 300
           DLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKT
Sbjct: 241 DLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKT 300

Query: 301 RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHH 360
           RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHH
Sbjct: 301 RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHH 360

Query: 361 YLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEEL 420
           YLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEEL
Sbjct: 361 YLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEEL 420

Query: 421 DDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQVGKMKAIVEKLRFTYRSDSFEN 480
           DDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQVGKMKAIVEKLRFTYRSDSFEN
Sbjct: 421 DDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQVGKMKAIVEKLRFTYRSDSFEN 480

Query: 481 PVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYPPDYNPEGKV 540
           PVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYPPDYNPEGKV
Sbjct: 481 PVLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSLVDEFKELVYPPDYNPEGKV 540

Query: 541 TKRK 544
           TKRK
Sbjct: 541 TKRK 544


>5Y58-A nrPDB
          Length = 575

 Score =  589 bits (1518), Expect = e-168,   Method: Composition-based stats.
 Identities = 111/512 (21%), Positives = 199/512 (38%), Gaps = 71/512 (13%)

Query: 35  RDSLIFLVDASKAMFESQSEDEL-TPFDMSIQCIQSVYISKIISSDRDLLAVVFYGTEKD 93
            + ++F ++ S+ MF+  S+ E  +P    ++ +  +    +I+     +   FY   ++
Sbjct: 2   HEGILFCIELSETMFKESSDLEYKSPLLEILESLDELMSQLVITRPGTAIGCYFYYCNRE 61

Query: 94  KNSVNFKNIYVLQELDNPGAKRILEL------------DQFKGQQG----QKRFQDMMGH 137
                   ++ L++++    K++ +L            D F  QQ     Q R   +   
Sbjct: 62  DAKEGIYELFPLRDINATFMKKLNDLLEDLSSGRISLYDYFMFQQTGSEKQVRLSVLFTF 121

Query: 138 GSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTNEDNPH-GNDSAKASRARTKAGDLRDT 196
             D  L E+           Q ++S+KR+ LFT+ D P    D  + +R R    DL D 
Sbjct: 122 MLDTFLEEIPG---------QKQLSNKRVFLFTDIDKPQEAQDIDERARLRRLTIDLFDN 172

Query: 197 GIFLDLMHL---KKPGGFDISLFYRDIISIA----EDEDLRVHFEESSKLEDLLRKVRAK 249
            +      +    KP  FD + FY DI+ +     E+  L   F+  S      + ++++
Sbjct: 173 KVNFATFFIGYADKP--FD-NEFYSDILQLGSHTNENTGLDSEFDGPSTKPIDAKYIKSR 229

Query: 250 ETRKRALSRLKLKL------NKDIVISVGIYNLVQKALKPPPIKLYRETNEPVKTKT--- 300
             RK+ + R+  +         + ++ V  Y +          KL  E +E ++ +    
Sbjct: 230 ILRKKEVKRIMFQCPLILDEKTNFIVGVKGYTMYTHEKAGVRYKLVYE-HEDIRQEAYSK 288

Query: 301 RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETE---ELKRFDDPGLMLMGFKPLVLLK 357
           R F     G  +   T +   YG   I L   + +   E     D  L ++GF+     K
Sbjct: 289 RKFLNPITGEDVTGKTVKVYPYGDLDINLSDSQDQIVMEAYTQKDAFLKIIGFRSSS--K 346

Query: 358 KHHYLR---PSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALV 414
             HY      S F+ P+E+   GS    ++LL    +K+  A+     + N  P    L 
Sbjct: 347 SIHYFNNIDKSSFIVPDEAKYEGSIRTLASLLKILRKKDKIAILWGKLKSNSHPSLYTLS 406

Query: 415 PQEEELDDQKIQVTPPGFQLVFLPFADDKRKMPFTEKIMATPEQ---VGKMKAIVE---- 467
           P         ++    GF L  +PF D+ RK P         E       MK + +    
Sbjct: 407 PSS-------VKDYNEGFYLYRVPFLDEIRKFPSLLSYDDGSEHKLDYDNMKKVTQSIMG 459

Query: 468 --KLRFTYRSDSFENPVLQQHFRNLEALALDL 497
              LR  Y    F+NP+LQ+H++ L    L +
Sbjct: 460 YFNLRDGYNPSDFKNPLLQKHYKVLHDYLLQI 491


>6ERF-B nrPDB
          Length = 572

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 94/526 (17%), Positives = 190/526 (36%), Gaps = 63/526 (11%)

Query: 22  ENLEASGDYKYSGRDSLIFLVDASKAMFESQSEDELTPFDMSIQCIQSVYISKIISSDRD 81
           ENL   G  +   + +++  +D    M  S    E +PF+ + + I      ++ + ++D
Sbjct: 12  ENLYFQG-VRSGNKAAVVLCMDVGFTMSNSIPGIE-SPFEQAKKVITMFVQRQVFAENKD 69

Query: 82  LLAVVFYGTEKDKNSVN----FKNIYVLQELDNPGAKRILELDQFKGQQG--QKRFQDMM 135
            +A+V +GT+   N ++    ++NI V + L  P    + +++  K Q G  Q  F D +
Sbjct: 70  EIALVLFGTDGTDNPLSGGDQYQNITVHRHLMLPDFDLLEDIES-KIQPGSQQADFLDAL 128

Query: 136 GHGSDYSLSEVLWVC-----ANLFSDVQFKMSHKRIMLFTNEDN----------PHGNDS 180
               D    E +          +F+D+  + S  ++ +  +             P     
Sbjct: 129 IVSMDVIQHETIGKKFEKRHIEIFTDLSSRFSKSQLDIIIHSLKKCDISLQFFLPFSLGK 188

Query: 181 AKASRARTKAGD----LRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEES 236
              S  R   GD    L   G    L  + +     + +    +IS+  ++ L   +  S
Sbjct: 189 EDGSGDR---GDGPFRLGGHGPSFPLKGITEQQKEGLEIVKMVMISLEGEDGLDEIYSFS 245

Query: 237 SKLEDLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLYRET---N 293
             L  L   V  K  R       +L +  ++ I +  Y  + +        +        
Sbjct: 246 ESLRKLC--VFKKIERHSIHWPCRLTIGSNLSIRIAAYKSILQERVKKTWTVVDAKTLKK 303

Query: 294 EPVKTKT-RTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEETEEL-KRFDDPGLMLMGFK 351
           E ++ +T    N      +L  D  +   YGS  +   K + E++  + +     ++GF 
Sbjct: 304 EDIQKETVYCLNDDDETEVLKEDIIQGFRYGSDIVPFSKVDEEQMKYKSEGKCFSVLGFC 363

Query: 352 PLVLLKKHHYLRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFV 411
               +++  ++   +           ++   S+L+    + ++ A+ RY   +   P   
Sbjct: 364 KSSQVQRRFFMGNQVLKVFAARDDEAAAVALSSLIHALDDLDMVAIVRYAYDKRANPQVG 423

Query: 412 ALVPQEEELDDQKIQVTPPGFQLVFLPFADDKRKMPFT-----EKIMATPEQVGKMKAI- 465
              P         I+        V LPF +D R+  F+     +K   T  Q+  + A+ 
Sbjct: 424 VAFPH--------IKHNYECLVYVQLPFMEDLRQYMFSSLKNSKKYAPTEAQLNAVDALI 475

Query: 466 -----------VEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEP 500
                       + L   + +    NP  Q+ F+ L   AL   EP
Sbjct: 476 DSMSLAKKDEKTDTLEDLFPTTKIPNPRFQRLFQCLLHRALHPREP 521


>5Y58-B nrPDB
          Length = 628

 Score = 50.5 bits (119), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 81/472 (17%), Positives = 151/472 (31%), Gaps = 69/472 (14%)

Query: 36  DSLIFLVDASKAMFESQSEDELTPFDMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKN 95
           +S  F+VD S +M ++ +  +   +        ++      S   D ++         +N
Sbjct: 3   ESTTFIVDVSPSMMKNNNVSKSMAYLEY-----TLLNKSKKSRKTDWISCYLANCPVSEN 57

Query: 96  SVNFKNIYVLQELDNPGAKR-----ILELDQFKGQQGQKRFQDMMGHGSDYSLSEVLWVC 150
           S    N++ +Q    P         I  L Q+  Q       D    G    +  +L V 
Sbjct: 58  SQEIPNVFQIQSFLAPVTTTATIGFIKRLKQYCDQHSH----DSSNEGLQSMIQCLLVVS 113

Query: 151 ANLFSDVQFKMSHKRIMLFTNEDNPHGNDSAKASRARTKAGDLRDTGIFLDLMHLKKPGG 210
            ++    Q +   K+I++FT  DN    D            DL    +   ++ +     
Sbjct: 114 LDIKQQFQARKILKQIVVFT--DNLDDLDITDEE------IDLLTEELSTRIILIDCGKD 165

Query: 211 FDISLFYRDIISIAED---------EDLRVHFEESSKLEDLLRKVRAKETR--------- 252
                   + + + E           +L V     +       +V + E R         
Sbjct: 166 TQEERKKSNWLKLVEAIPNSRIYNMNELLVEITSPATSVVKPVRVFSGELRLGADILSTQ 225

Query: 253 -----------------------KRALSRLKLKLNKDIVISVGIYNLVQKALKPPPIKLY 289
                                   +A+S L  K   ++  S                +++
Sbjct: 226 TSNPSGSMQDENCLCIKVEAFPATKAVSGLNRKTAVEVEDSQK-KERYVGVKSIIEYEIH 284

Query: 290 RETNEPVKTKTRTFNTSTGGLLLPSDTK-RSQIYGSRQIILEKEETEELKRFDDPGLMLM 348
            E N+   ++     +S   + +  D+  ++  YG+  ++L     ++      PGL L 
Sbjct: 285 NEGNKKNVSEDDQSGSSYIPVTISKDSVTKAYRYGADYVVLPSVLVDQTVYESFPGLDLR 344

Query: 349 GFKPLVLLKKHHYLRPSLFVYPEESL-VIGSSTLFSALLIKCLEKEVAALCRYTPRRNIP 407
           GF     L ++     S F+  +  L        FSAL+   LE    A+ RY  +++  
Sbjct: 345 GFLNREALPRYFLTSESSFITADTRLGCQSDLMAFSALVDVMLENRKIAVARYVSKKDSE 404

Query: 408 PYFVALVPQE-EELDDQKIQVTPPGFQLVFLPFADDKR--KMPFTEKIMATP 456
               AL P   E  +    +       L  LPFA+D+R    P       T 
Sbjct: 405 VNMCALCPVLIEHSNINSEKKFVKSLTLCRLPFAEDERVTDFPKLLDRTTTS 456


>1A8L-A nrPDB
          Length = 226

 Score = 33.5 bits (75), Expect = 0.28,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 3/81 (3%)

Query: 150 CANLFSDVQF--KMSHKRIMLFTNEDNPHGNDSAKASRA-RTKAGDLRDTGIFLDLMHLK 206
           C  L   VQ   +++ K      + D P G + AK  R  R  A  +   G    + +  
Sbjct: 38  CDQLKQLVQELSELTDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQDGKDFGVRYFG 97

Query: 207 KPGGFDISLFYRDIISIAEDE 227
            P G + + F  DI+ ++ +E
Sbjct: 98  LPAGHEFAAFLEDIVDVSREE 118


>1S7Z-A nrPDB
          Length = 117

 Score = 33.1 bits (74), Expect = 0.39,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 192 DLRDTGIFLDLMHLKKPGGFDISLFYRDIISIAEDEDLRVHFEESSKLEDLLRKVRAKET 251
           D+RDT    D +H+       +  +Y DI S+   E + + FE+S  + D    +R  + 
Sbjct: 27  DIRDTDDLHDAIHMAADNA--VPHYYADIFSVMASEGIDLEFEDSGLMPDTKDVIRILQA 84

Query: 252 R 252
           R
Sbjct: 85  R 85


>2AEV-A nrPDB
          Length = 374

 Score = 32.4 bits (72), Expect = 0.63,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 19/112 (16%)

Query: 448 FTEKIMATP---------EQVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLM 498
            T+K+M  P         E V K+   +E  +F   +   + P+L   +R L+   L+ +
Sbjct: 205 STDKLMEGPRGGLLAGKKELVDKI--YIEGTKFGLEA---QPPLLAGIYRALKNFNLERI 259

Query: 499 EP--EQAVDLTLPKVEAMNKRLGSLVDEFKELVYPPDYNPEGKVTKRKHDNE 548
               E+A +  L K+E +NK L + +D+   +VY  +  P G V KR + ++
Sbjct: 260 RKAFERAKNFDLSKIEKLNKELKA-IDDNINIVY--ERTPTGFVIKRVYKDD 308


>5TXC-A nrPDB
          Length = 705

 Score = 31.2 bits (69), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/27 (48%), Positives = 18/27 (66%)

Query: 508 LPKVEAMNKRLGSLVDEFKELVYPPDY 534
           LPKVE +  R  + ++ F +LV PPDY
Sbjct: 399 LPKVERLTLRNRNGIEVFSDLVLPPDY 425


>2FKN-A nrPDB
          Length = 552

 Score = 30.1 bits (66), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 6/76 (7%)

Query: 175 PHGNDSAKASRARTKAGDLR------DTGIFLDLMHLKKPGGFDISLFYRDIISIAEDED 228
           P G    +A R R    +L            ++ M   +  G  +  +  +I  +A+DE 
Sbjct: 272 PEGYSLDEADRLRQDTPELYVRLAKQSMKKHVEAMLAFQQKGSIVFDYGNNIRQVAKDEG 331

Query: 229 LRVHFEESSKLEDLLR 244
           L   F+    +   +R
Sbjct: 332 LENAFDFPGFVPAYIR 347


>1TXK-A nrPDB
          Length = 498

 Score = 28.5 bits (62), Expect = 8.5,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 12/110 (10%)

Query: 159 FKMSHKRIMLFT-NEDNPHGNDSAKASRARTKAGDLRDTGIFLDLMHLKKPGG---FDIS 214
            +M+ K  + F+ +ED  H  D+A   + R   GD++ + +      +++P G   F + 
Sbjct: 356 KEMNFKYTITFSRDEDKLHAPDNAWVQQTRRSTGDVKQSNL------IRQPDGTIAFVVD 409

Query: 215 LFYRDIISIAEDEDLRVHFEESSKLEDLLRKVRAKETRK--RALSRLKLK 262
               ++  + ED  +          E +   VR     K  R + R+K+K
Sbjct: 410 FTGAEMKKLPEDTPVTAQTSIGDNGEIVESTVRYNPVTKGWRLVMRVKVK 459


>2F9G-A nrPDB
          Length = 353

 Score = 28.5 bits (62), Expect = 8.6,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 34/78 (43%), Gaps = 8/78 (10%)

Query: 56  ELTPFDMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGAKR 115
           ++ PFD  +  ++++   KI+   +    +  +  ++  +  NF  +Y++QEL      R
Sbjct: 43  KIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHR 102

Query: 116 ILE--------LDQFKGQ 125
           ++         +  F  Q
Sbjct: 103 VISTQMLSDDHIQYFIYQ 120


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.313    0.131    0.345 

Lambda     K      H
   0.267   0.0403    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,041,466
Number of Sequences: 36641
Number of extensions: 930570
Number of successful extensions: 2708
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 2677
Number of HSP's gapped (non-prelim): 30
length of query: 609
length of database: 10,336,785
effective HSP length: 103
effective length of query: 506
effective length of database: 6,562,762
effective search space: 3320757572
effective search space used: 3320757572
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 62 (28.5 bits)