BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P11413 (515 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6E07-L nrPDB 1078 0.0 6D24-C nrPDB 480 e-136 4LGV-A nrPDB 269 2e-72 1E7Y-A nrPDB 255 3e-68 4A3W-A nrPDB 32 0.59 6MXO-A nrPDB 30 1.7 >6E07-L nrPDB Length = 515 Score = 1078 bits (2787), Expect = 0.0, Method: Compositional matrix adjust. Identities = 514/515 (99%), Positives = 514/515 (99%) Query: 1 MAEQVALSRTQVCGILREELFQGDAFHQSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGL 60 MAEQVALSRTQVCGILREELFQGDAFHQSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGL Sbjct: 1 MAEQVALSRTQVCGILREELFQGDAFHQSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGL 60 Query: 61 LPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQYDDAASYQR 120 LPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQYDDAASYQR Sbjct: 61 LPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQYDDAASYQR 120 Query: 121 LNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSS 180 LNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSS Sbjct: 121 LNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSS 180 Query: 181 DRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEP 240 DRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEP Sbjct: 181 DRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEP 240 Query: 241 FGTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQA 300 FGTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQA Sbjct: 241 FGTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQA 300 Query: 301 NNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGK 360 NNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGK Sbjct: 301 NNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGK 360 Query: 361 ALNERKAEVRLQFHDVAGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESEL 420 ALNERKAEVRLQFHDVAGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESEL Sbjct: 361 ALNERKAEVRLQFHDVAGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESEL 420 Query: 421 DLTYGNRYKNVKLPDAYERLILDVFCGSQMHFVRSDELREAWRIFTPLLHQIELEKPKPI 480 DLTYGNRYKNVKLPDAYERLILDVFCGSQMHFVRSDEL EAWRIFTPLLHQIELEKPKPI Sbjct: 421 DLTYGNRYKNVKLPDAYERLILDVFCGSQMHFVRSDELLEAWRIFTPLLHQIELEKPKPI 480 Query: 481 PYIYGSRGPTEADELMKRVGFQYEGTYKWVNPHKL 515 PYIYGSRGPTEADELMKRVGFQYEGTYKWVNPHKL Sbjct: 481 PYIYGSRGPTEADELMKRVGFQYEGTYKWVNPHKL 515 >6D24-C nrPDB Length = 541 Score = 480 bits (1235), Expect = e-136, Method: Compositional matrix adjust. Identities = 242/486 (49%), Positives = 327/486 (67%), Gaps = 18/486 (3%) Query: 28 QSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEP- 86 +S +++GASGDLAKKK +P ++ L+ +G+LP + I+GYARS T+ D+ K + Sbjct: 51 RSRALTIVVLGASGDLAKKKTFPALFQLYCNGMLPRDVNILGYARS--TMEDVEKWKKDT 108 Query: 87 ---FFKATPEEKLKLEDFFARNSYVAGQYDDAASYQRLNSHMNALHLGSQA-----NRLF 138 FF E + +F R SY+ G YD + RLN + + Q NRLF Sbjct: 109 LAGFFTRLDERGCHVGNFLRRISYMTGSYDRDEDFARLNERILRMEEAFQGPEKGGNRLF 168 Query: 139 YLALPPTVYEAVTKNIHESCMS--QIGWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQI 196 YLALPP+V+ V + + + M ++GW R+IVEKPFGRD ++S++LSN + LF E Q+ Sbjct: 169 YLALPPSVFVGVCRGLSKGAMQKPELGWVRLIVEKPFGRDTETSEQLSNQLKPLFNERQV 228 Query: 197 YRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGII 256 +RIDHYLGKEMVQN++V RFANR+F +WN ++IACV +TFKE GTEGRGGYFD GII Sbjct: 229 FRIDHYLGKEMVQNIIVTRFANRVFSALWNSNSIACVQITFKEKIGTEGRGGYFDSIGII 288 Query: 257 RDVMQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEG 316 RDV+QNHL Q+L L+ MEKP S +++D+RDEKV+VL+ + VLGQY + DG Sbjct: 289 RDVIQNHLTQILSLLTMEKPRSLSAEDIRDEKVQVLRQVVPANPAECVLGQYTASADG-- 346 Query: 317 EATKGYLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGKALNERKAEVRLQFHDV 376 +T GYLDDP+VP+GS TFA + L+V N+RW GVPFI+R GKAL ER ++R+QF D Sbjct: 347 -STPGYLDDPSVPKGSHCPTFAVLRLHVNNDRWHGVPFIIRAGKALEERLLDIRIQFKDE 405 Query: 377 AGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESELDLTYGNRYKNVKLPDA 436 F + +RNELVIR QP+EA+Y K+ K PG+ + ++ELDLTY RY +V LPDA Sbjct: 406 IRP-FGESTQRNELVIRAQPSEAMYLKLTAKTPGLLNDTHQTELDLTYERRY-DVTLPDA 463 Query: 437 YERLILDVFCGSQMHFVRSDELREAWRIFTPLLHQIELEKPKPIPYIYGSRGPTEADELM 496 YE LI + G+ +FVR DEL AWRI+TPLLH I+ + K +PY GS GP EA E + Sbjct: 464 YESLIHEALLGNSTNFVRVDELDAAWRIYTPLLHAIDRGEVKVLPYAAGSCGPEEAQEFI 523 Query: 497 KRVGFQ 502 + G++ Sbjct: 524 RISGYK 529 >4LGV-A nrPDB Length = 490 Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 170/506 (33%), Positives = 259/506 (51%), Gaps = 67/506 (13%) Query: 24 DAFHQSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQ 83 D H SD + +I G +GDLA+K + ++ L R L I+G A +T+ + + Sbjct: 25 DDSHPSD--LLVIFGITGDLARKMTFRALYRLERREELEHP--IIGVASDDITLDQLLDR 80 Query: 84 SEPFFKATPE--EKLKLEDFFARNSYVAGQYDDAASYQRLNSHMNALHLGSQANRLFYLA 141 + KAT E + + R SY++G D Y L A +G + L+YL Sbjct: 81 AREAIKATGETFDDAVFDRLAGRLSYLSGDVTDTGLYSEL-----AEKIGGDSRPLYYLE 135 Query: 142 LPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRIDH 201 +PP+++ + +N+ ++ + + R+ VEKPFG DL+S+ L+ + ++ EDQI R+DH Sbjct: 136 MPPSLFAPIVENLAKADLLERA--RVAVEKPFGHDLESARDLNARLRAVLDEDQILRVDH 193 Query: 202 YLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDVMQ 261 +LGK+ V+ L LRFAN +W+RD+I+ + +T E FG E RG ++D G +RDV+Q Sbjct: 194 FLGKQPVEELQYLRFANNALAKLWDRDSISEIHITMAEDFGIEDRGKFYDAVGAVRDVVQ 253 Query: 262 NHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKG 321 NHLLQ+L LVAME P +DD+ D+K +V + + + + V GQY +G Sbjct: 254 NHLLQVLALVAMEPPVGAGADDLNDKKAEVFRAMPSLDPEHCVRGQY-----------RG 302 Query: 322 YLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGKALNERKAEVRLQFHDVAGDIF 381 Y + P V + STT T+ A+ ++N RW GVP LR GKAL + EVR+ H V G F Sbjct: 303 YTEVPGVAKDSTTETYVALRTEIDNWRWAGVPIFLRAGKALPHKVTEVRMFLHHVPGFSF 362 Query: 382 ---HQQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESELDLTYGNRYKNVKLPDA-- 436 + + N++V+R+ P+ PGM +L G+ + +V L + Sbjct: 363 LPNRRPPEPNQIVLRIDPD-----------PGMRL-----QLSAQVGDSWHDVHLDSSFA 406 Query: 437 ---------YERLILDVFCGSQMHFVRSDELREAWRIFTPLLHQIELEKPKPI-PYIYGS 486 YERL+ F G + F R D + E WRI P+ L+KP I Y GS Sbjct: 407 VDLGEPVRPYERLLYAAFNGDRQLFAREDAIEETWRIVQPV-----LDKPSRIHQYEQGS 461 Query: 487 RGPTEADELMKRVGFQYEGTYKWVNP 512 GP A L+ G + W P Sbjct: 462 WGPEAAQALV-------HGRHAWQQP 480 >1E7Y-A nrPDB Length = 485 Score = 255 bits (651), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 159/478 (33%), Positives = 240/478 (50%), Gaps = 16/478 (3%) Query: 33 IFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATP 92 + G +GDLAK+K+YP+++ L++ G L ++ IVG AR L + ++ K Sbjct: 7 LVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFT 66 Query: 93 EEKLKLEDFFARNSYVAGQYDDAASYQRLNSHMN--ALHLGSQANRLFYLALPPTVYEAV 150 +++ + E F SY A DAASY L + A NR+FY+++ P + + Sbjct: 67 DDQAQAEAFIEHFSYRAHDVTDAASYAVLKEAIEEAADKFDIDGNRIFYMSVAPRFFGTI 126 Query: 151 TKNI-HESCMSQIGWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRIDHYLGKEMVQ 209 K + E ++ G+NR+++EKPFG ++ L N + + F ++Q++RI+HYLGKEMVQ Sbjct: 127 AKYLKSEGLLADTGYNRLMIEKPFGTSYDTAAELQNDLENAFDDNQLFRINHYLGKEMVQ 186 Query: 210 NLMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDVMQNHLLQMLC 269 N+ LRF N IF WN+D I V +T E G E R GY+D G + D++QNH +Q++ Sbjct: 187 NIAALRFGNPIFDAAWNKDYIKNVQVTLSEVLGVEERAGYYDTAGALLDMIQNHTMQIVG 246 Query: 270 LVAMEKPASTNSDDVRDEK---VKVLKCISEVQANN-VVLGQYVGNPDGEGEATKGYLDD 325 +AMEKP S D+R K LK E + N V QY G+ K YL++ Sbjct: 247 WLAMEKPESFTDKDIRAAKNAAFNALKIYDEAEVNKYFVRAQYGA---GDSADFKPYLEE 303 Query: 326 PTVPRGSTTATFAAVVLYVENERWDGVPFILRCGKALNERKAEVRLQFHDVAGDI---FH 382 VP S TF A L + RW+GVPF +R GK L ++ V + F AG Sbjct: 304 LDVPADSKNNTFIAGELQFDLPRWEGVPFYVRSGKRLAAKQTRVDIVFK--AGTFNFGSE 361 Query: 383 QQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESELDLTYGNRYKNVKLPDAYERLIL 442 Q+ + L I + P A+ K+ K FN +L T + K P+ YER+I Sbjct: 362 QEAQEAVLSIIIDPKGAIELKLNAKSVEDAFNTRTIDLGWTVSDEDKK-NTPEPYERMIH 420 Query: 443 DVFCGSQMHFVRSDELREAWRIFTPLLHQIELEKPKPIPYIYGSRGPTEADELMKRVG 500 D G +F + + AW+ + +K Y GS GP +D+L+ G Sbjct: 421 DTMNGDGSNFADWNGVSIAWKFVDAISAVYTADKAPLETYKSGSMGPEASDKLLAANG 478 >4A3W-A nrPDB Length = 160 Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%) Query: 163 GWNRIIVEKPFG--RDLQSSDRLSNHISSLFRE----DQIYRIDHYLGKEMVQNLMVLRF 216 G N + E G R + S RL+ S L+RE + ++ I H LG + N V+RF Sbjct: 77 GMNFVFGEAELGGARAVLSVFRLTTADSELYRERVVKEAVHEIGHVLGLKHCSNNCVMRF 136 Query: 217 ANRI 220 +N + Sbjct: 137 SNSV 140 >6MXO-A nrPDB Length = 442 Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust. Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 1/34 (2%) Query: 479 PIPYIYG-SRGPTEADELMKRVGFQYEGTYKWVN 511 P YI G +GPT A+E +++ G + +G ++W++ Sbjct: 150 PSTYIEGLPQGPTTAEETVQKEGMRKQGLFQWLD 183 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6E07-L nrPDB 902 0.0 6D24-C nrPDB 703 0.0 1E7Y-A nrPDB 645 0.0 4LGV-A nrPDB 604 e-173 Sequences not found previously or not previously below threshold: 2A1T-A nrPDB 35 0.10 3MDE-A nrPDB 34 0.12 5NSS-F nrPDB 33 0.40 3IC7-A nrPDB 33 0.42 2C98-A nrPDB 32 0.43 2XYN-A nrPDB 32 0.69 1QE0-A nrPDB 31 1.0 4BAC-A nrPDB 31 1.5 1YW5-A nrPDB 31 1.6 CONVERGED! >6E07-L nrPDB Length = 515 Score = 902 bits (2332), Expect = 0.0, Method: Composition-based stats. Identities = 514/515 (99%), Positives = 514/515 (99%) Query: 1 MAEQVALSRTQVCGILREELFQGDAFHQSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGL 60 MAEQVALSRTQVCGILREELFQGDAFHQSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGL Sbjct: 1 MAEQVALSRTQVCGILREELFQGDAFHQSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGL 60 Query: 61 LPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQYDDAASYQR 120 LPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQYDDAASYQR Sbjct: 61 LPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQYDDAASYQR 120 Query: 121 LNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSS 180 LNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSS Sbjct: 121 LNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSS 180 Query: 181 DRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEP 240 DRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEP Sbjct: 181 DRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEP 240 Query: 241 FGTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQA 300 FGTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQA Sbjct: 241 FGTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQA 300 Query: 301 NNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGK 360 NNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGK Sbjct: 301 NNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGK 360 Query: 361 ALNERKAEVRLQFHDVAGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESEL 420 ALNERKAEVRLQFHDVAGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESEL Sbjct: 361 ALNERKAEVRLQFHDVAGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESEL 420 Query: 421 DLTYGNRYKNVKLPDAYERLILDVFCGSQMHFVRSDELREAWRIFTPLLHQIELEKPKPI 480 DLTYGNRYKNVKLPDAYERLILDVFCGSQMHFVRSDEL EAWRIFTPLLHQIELEKPKPI Sbjct: 421 DLTYGNRYKNVKLPDAYERLILDVFCGSQMHFVRSDELLEAWRIFTPLLHQIELEKPKPI 480 Query: 481 PYIYGSRGPTEADELMKRVGFQYEGTYKWVNPHKL 515 PYIYGSRGPTEADELMKRVGFQYEGTYKWVNPHKL Sbjct: 481 PYIYGSRGPTEADELMKRVGFQYEGTYKWVNPHKL 515 >6D24-C nrPDB Length = 541 Score = 703 bits (1814), Expect = 0.0, Method: Composition-based stats. Identities = 242/486 (49%), Positives = 327/486 (67%), Gaps = 18/486 (3%) Query: 28 QSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEP- 86 +S +++GASGDLAKKK +P ++ L+ +G+LP + I+GYARS T+ D+ K + Sbjct: 51 RSRALTIVVLGASGDLAKKKTFPALFQLYCNGMLPRDVNILGYARS--TMEDVEKWKKDT 108 Query: 87 ---FFKATPEEKLKLEDFFARNSYVAGQYDDAASYQRLNSHMNALHLGSQA-----NRLF 138 FF E + +F R SY+ G YD + RLN + + Q NRLF Sbjct: 109 LAGFFTRLDERGCHVGNFLRRISYMTGSYDRDEDFARLNERILRMEEAFQGPEKGGNRLF 168 Query: 139 YLALPPTVYEAVTKNIHESCMS--QIGWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQI 196 YLALPP+V+ V + + + M ++GW R+IVEKPFGRD ++S++LSN + LF E Q+ Sbjct: 169 YLALPPSVFVGVCRGLSKGAMQKPELGWVRLIVEKPFGRDTETSEQLSNQLKPLFNERQV 228 Query: 197 YRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGII 256 +RIDHYLGKEMVQN++V RFANR+F +WN ++IACV +TFKE GTEGRGGYFD GII Sbjct: 229 FRIDHYLGKEMVQNIIVTRFANRVFSALWNSNSIACVQITFKEKIGTEGRGGYFDSIGII 288 Query: 257 RDVMQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEG 316 RDV+QNHL Q+L L+ MEKP S +++D+RDEKV+VL+ + VLGQY + DG Sbjct: 289 RDVIQNHLTQILSLLTMEKPRSLSAEDIRDEKVQVLRQVVPANPAECVLGQYTASADG-- 346 Query: 317 EATKGYLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGKALNERKAEVRLQFHDV 376 +T GYLDDP+VP+GS TFA + L+V N+RW GVPFI+R GKAL ER ++R+QF D Sbjct: 347 -STPGYLDDPSVPKGSHCPTFAVLRLHVNNDRWHGVPFIIRAGKALEERLLDIRIQFKDE 405 Query: 377 AGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESELDLTYGNRYKNVKLPDA 436 F + +RNELVIR QP+EA+Y K+ K PG+ + ++ELDLTY RY +V LPDA Sbjct: 406 IRP-FGESTQRNELVIRAQPSEAMYLKLTAKTPGLLNDTHQTELDLTYERRY-DVTLPDA 463 Query: 437 YERLILDVFCGSQMHFVRSDELREAWRIFTPLLHQIELEKPKPIPYIYGSRGPTEADELM 496 YE LI + G+ +FVR DEL AWRI+TPLLH I+ + K +PY GS GP EA E + Sbjct: 464 YESLIHEALLGNSTNFVRVDELDAAWRIYTPLLHAIDRGEVKVLPYAAGSCGPEEAQEFI 523 Query: 497 KRVGFQ 502 + G++ Sbjct: 524 RISGYK 529 >1E7Y-A nrPDB Length = 485 Score = 645 bits (1663), Expect = 0.0, Method: Composition-based stats. Identities = 159/478 (33%), Positives = 240/478 (50%), Gaps = 16/478 (3%) Query: 33 IFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATP 92 + G +GDLAK+K+YP+++ L++ G L ++ IVG AR L + ++ K Sbjct: 7 LVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFT 66 Query: 93 EEKLKLEDFFARNSYVAGQYDDAASYQRLNSHMN--ALHLGSQANRLFYLALPPTVYEAV 150 +++ + E F SY A DAASY L + A NR+FY+++ P + + Sbjct: 67 DDQAQAEAFIEHFSYRAHDVTDAASYAVLKEAIEEAADKFDIDGNRIFYMSVAPRFFGTI 126 Query: 151 TKNI-HESCMSQIGWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRIDHYLGKEMVQ 209 K + E ++ G+NR+++EKPFG ++ L N + + F ++Q++RI+HYLGKEMVQ Sbjct: 127 AKYLKSEGLLADTGYNRLMIEKPFGTSYDTAAELQNDLENAFDDNQLFRINHYLGKEMVQ 186 Query: 210 NLMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDVMQNHLLQMLC 269 N+ LRF N IF WN+D I V +T E G E R GY+D G + D++QNH +Q++ Sbjct: 187 NIAALRFGNPIFDAAWNKDYIKNVQVTLSEVLGVEERAGYYDTAGALLDMIQNHTMQIVG 246 Query: 270 LVAMEKPASTNSDDVRDEK---VKVLKCISEVQANN-VVLGQYVGNPDGEGEATKGYLDD 325 +AMEKP S D+R K LK E + N V QY G+ K YL++ Sbjct: 247 WLAMEKPESFTDKDIRAAKNAAFNALKIYDEAEVNKYFVRAQYGA---GDSADFKPYLEE 303 Query: 326 PTVPRGSTTATFAAVVLYVENERWDGVPFILRCGKALNERKAEVRLQFHDVAGDI---FH 382 VP S TF A L + RW+GVPF +R GK L ++ V + F AG Sbjct: 304 LDVPADSKNNTFIAGELQFDLPRWEGVPFYVRSGKRLAAKQTRVDIVFK--AGTFNFGSE 361 Query: 383 QQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESELDLTYGNRYKNVKLPDAYERLIL 442 Q+ + L I + P A+ K+ K FN +L T + K P+ YER+I Sbjct: 362 QEAQEAVLSIIIDPKGAIELKLNAKSVEDAFNTRTIDLGWTVSDEDKK-NTPEPYERMIH 420 Query: 443 DVFCGSQMHFVRSDELREAWRIFTPLLHQIELEKPKPIPYIYGSRGPTEADELMKRVG 500 D G +F + + AW+ + +K Y GS GP +D+L+ G Sbjct: 421 DTMNGDGSNFADWNGVSIAWKFVDAISAVYTADKAPLETYKSGSMGPEASDKLLAANG 478 >4LGV-A nrPDB Length = 490 Score = 604 bits (1558), Expect = e-173, Method: Composition-based stats. Identities = 170/506 (33%), Positives = 258/506 (50%), Gaps = 67/506 (13%) Query: 24 DAFHQSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQ 83 D H SD + +I G +GDLA+K + ++ L R L I+G A +T+ + + Sbjct: 25 DDSHPSD--LLVIFGITGDLARKMTFRALYRLERREELEHP--IIGVASDDITLDQLLDR 80 Query: 84 SEPFFKATPE--EKLKLEDFFARNSYVAGQYDDAASYQRLNSHMNALHLGSQANRLFYLA 141 + KAT E + + R SY++G D Y L A +G + L+YL Sbjct: 81 AREAIKATGETFDDAVFDRLAGRLSYLSGDVTDTGLYSEL-----AEKIGGDSRPLYYLE 135 Query: 142 LPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRIDH 201 +PP+++ + +N+ ++ + + R+ VEKPFG DL+S+ L+ + ++ EDQI R+DH Sbjct: 136 MPPSLFAPIVENLAKADLLERA--RVAVEKPFGHDLESARDLNARLRAVLDEDQILRVDH 193 Query: 202 YLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDVMQ 261 +LGK+ V+ L LRFAN +W+RD+I+ + +T E FG E RG ++D G +RDV+Q Sbjct: 194 FLGKQPVEELQYLRFANNALAKLWDRDSISEIHITMAEDFGIEDRGKFYDAVGAVRDVVQ 253 Query: 262 NHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKG 321 NHLLQ+L LVAME P +DD+ D+K +V + + + + V GQY +G Sbjct: 254 NHLLQVLALVAMEPPVGAGADDLNDKKAEVFRAMPSLDPEHCVRGQY-----------RG 302 Query: 322 YLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGKALNERKAEVRLQFHDVAGDIF 381 Y + P V + STT T+ A+ ++N RW GVP LR GKAL + EVR+ H V G F Sbjct: 303 YTEVPGVAKDSTTETYVALRTEIDNWRWAGVPIFLRAGKALPHKVTEVRMFLHHVPGFSF 362 Query: 382 ---HQQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESELDLTYGNRYKNVKLPD--- 435 + + N++V+R+ P+ PGM +L G+ + +V L Sbjct: 363 LPNRRPPEPNQIVLRIDPD-----------PGMRL-----QLSAQVGDSWHDVHLDSSFA 406 Query: 436 --------AYERLILDVFCGSQMHFVRSDELREAWRIFTPLLHQIELEKPKPI-PYIYGS 486 YERL+ F G + F R D + E WRI P+ L+KP I Y GS Sbjct: 407 VDLGEPVRPYERLLYAAFNGDRQLFAREDAIEETWRIVQPV-----LDKPSRIHQYEQGS 461 Query: 487 RGPTEADELMKRVGFQYEGTYKWVNP 512 GP A L+ G + W P Sbjct: 462 WGPEAAQALV-------HGRHAWQQP 480 >2A1T-A nrPDB Length = 421 Score = 34.7 bits (78), Expect = 0.10, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 25/149 (16%) Query: 68 VGYARSRLTVADIRKQSEPFF-KATPEEKLKLEDFFARNSYVAGQYDDAASYQRLNSHMN 126 VG A+ L A F K E + S++ + R++ Sbjct: 289 VGLAQRALDEATKYALERKTFGKLLVEHQA--------ISFMLAEMAMKVELARMSYQRA 340 Query: 127 ALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSSDRLSNH 186 A + S +Y ++ + + + +G N E P Sbjct: 341 AWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYP-------------- 386 Query: 187 ISSLFREDQIYRIDHYLGKEMVQNLMVLR 215 + L R+ +IY+I Y G +Q L+V R Sbjct: 387 VEKLMRDAKIYQI--YEGTSQIQRLIVAR 413 >3MDE-A nrPDB Length = 385 Score = 34.3 bits (77), Expect = 0.12, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 44/139 (31%), Gaps = 19/139 (13%) Query: 80 IRKQSEPFFKATPEEKLKLEDFFAR---NSYVAGQYDDAASYQRLNSHMNALHLGSQANR 136 + +++ E+ A S++ RL+ A + S Sbjct: 256 LAQRALDEATKYALERKTFGKLLAEHQGISFLLADMAMKVELARLSYQRAAWEIDSGRRN 315 Query: 137 LFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQI 196 +Y ++ + + + G N E P + L R+ +I Sbjct: 316 TYYASIAKAYAADIANQLATDAVQVFGGNGFNTEYP--------------VEKLMRDAKI 361 Query: 197 YRIDHYLGKEMVQNLMVLR 215 Y+I Y G +Q +++ R Sbjct: 362 YQI--YEGTAQIQRIIIAR 378 >5NSS-F nrPDB Length = 295 Score = 32.8 bits (73), Expect = 0.40, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 39/118 (33%), Gaps = 14/118 (11%) Query: 305 LGQYVGNPDGEGEATKGYLDDPT-----------VPRGSTTATFAAVVLYVENERWDGVP 353 + +Y N GE + L+ + + T A L+ + RW G P Sbjct: 21 MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQG-P 79 Query: 354 FILRCGKALNERKAEVRLQFHDVAGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPGM 411 FI ALNE + L F AG Q + R ++ + P M Sbjct: 80 FISLNCAALNENLLDSEL-FGHEAGAFTGAQKRHPGRFERAD-GGTLFLDELATAPMM 135 >3IC7-A nrPDB Length = 126 Score = 32.8 bits (73), Expect = 0.42, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 38/105 (36%), Gaps = 3/105 (2%) Query: 279 TNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFA 338 +N+ + ++ + L+ + ++++LGQY +G + + Y V + ++ Sbjct: 1 SNAMNFKESRAIYLQIADRI-CDDILLGQY--EEEGRIPSVREYASIVEVNANTVMRSYE 57 Query: 339 AVVLYVENERWDGVPFILRCGKALNERKAEVRLQFHDVAGDIFHQ 383 + G+ F + G + + G F Q Sbjct: 58 YLQSQEVIYNKRGIGFFVASGAKMLIHSLRKEQFLKEEVGSFFRQ 102 >2C98-A nrPDB Length = 265 Score = 32.4 bits (72), Expect = 0.43, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 39/118 (33%), Gaps = 14/118 (11%) Query: 305 LGQYVGNPDGEGEATKGYLDDPT-----------VPRGSTTATFAAVVLYVENERWDGVP 353 + +Y N GE + L+ + + T A L+ + RW G P Sbjct: 1 MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQG-P 59 Query: 354 FILRCGKALNERKAEVRLQFHDVAGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPGM 411 FI ALNE + L F AG Q + R ++ + P M Sbjct: 60 FISLNCAALNENLLDSEL-FGHEAGAFTGAQKRHPGRFERAD-GGTLFLDELATAPMM 115 >2XYN-A nrPDB Length = 292 Score = 32.0 bits (71), Expect = 0.69, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 220 IFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKP 276 ++ +W + ++ + T KE T + E +++++ +L+Q+L + +E P Sbjct: 48 VYVGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPP 102 >1QE0-A nrPDB Length = 420 Score = 31.2 bits (69), Expect = 1.0, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 19/43 (44%) Query: 321 GYLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGKALN 363 Y +DP + RG T A L ++N +DG L G N Sbjct: 248 PYTEDPNLVRGLDYYTHTAFELMMDNPNYDGAITTLCGGGRYN 290 >4BAC-A nrPDB Length = 396 Score = 30.9 bits (68), Expect = 1.5, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 50/161 (31%), Gaps = 32/161 (19%) Query: 353 PFILRCGKALNERKAEV-RLQFHDVAGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPGM 411 P+ + G + + +++ RL + G + K +L+ VQ T P + Sbjct: 215 PYHPQSGSKVERKNSDIKRLLTKLLVG----RPTKWYDLLPVVQ-----LALNNTYSPVL 265 Query: 412 FFNPEESELDLTYGNRYKNVKLPDAYERLILDVFCGSQMHFVRSDELREAWRIFTPLLHQ 471 + P + + + P A + R +EL I T L H Sbjct: 266 KYTPHQLLFGI-------DSNTPFA---------NQDTLDLTREEELSLLQEIRTSLYH- 308 Query: 472 IELEKPKPIPYIYGSRGPTEADELMKRVGFQYEGTYKWVNP 512 P P S P + +RV +W P Sbjct: 309 -----PSTPPASSRSWSPVVGQLVQERVARPASLRPRWHKP 344 >1YW5-A nrPDB Length = 177 Score = 30.9 bits (68), Expect = 1.6, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 5/69 (7%) Query: 142 LPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQS-----SDRLSNHISSLFREDQI 196 LPP V+++ ++ N + P+G D + + +N L ED Sbjct: 8 LPPNWTIRVSRSHNKEYFLNQSTNESSWDPPYGTDKEVLNAYIAKFKNNGYKPLVNEDGQ 67 Query: 197 YRIDHYLGK 205 R+ H L K Sbjct: 68 VRVSHLLIK 76 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.306 0.128 0.336 Lambda K H 0.267 0.0397 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,614,828 Number of Sequences: 36641 Number of extensions: 720068 Number of successful extensions: 1773 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 1727 Number of HSP's gapped (non-prelim): 21 length of query: 515 length of database: 10,336,785 effective HSP length: 101 effective length of query: 414 effective length of database: 6,636,044 effective search space: 2747322216 effective search space used: 2747322216 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 61 (28.2 bits)