BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P11373 (224 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3DD5-A nrPDB 399 e-112 4OYY-A nrPDB 235 1e-62 5AJH-A nrPDB 211 2e-55 1CUU-A nrPDB 207 4e-54 5X88-A nrPDB 195 1e-50 3QPD-A nrPDB 186 6e-48 4PSD-A nrPDB 98 3e-21 3AJA-A nrPDB 32 0.22 5WUT-A nrPDB 30 0.62 1BS9-A nrPDB 29 1.4 5YYC-A nrPDB 29 1.7 2IV0-A nrPDB 28 3.8 5Y3M-A nrPDB 27 5.1 4IAO-A nrPDB 27 6.3 3NTX-A nrPDB 27 6.4 5Y3K-A nrPDB 27 6.6 2HJH-A nrPDB 27 7.1 5H82-A nrPDB 27 7.3 >3DD5-A nrPDB Length = 201 Score = 399 bits (1026), Expect = e-112, Method: Compositional matrix adjust. Identities = 194/200 (97%), Positives = 197/200 (98%) Query: 25 VALETRQSSTRNELETGSSSACPKVIYIFARASTEPGNMGISAGPIVADALERIYGANNV 84 +A+ QSSTRNELETGSSSACPKVIYIFARASTEPGNMGISAGPIVADALERIYGAN+V Sbjct: 2 MAISDPQSSTRNELETGSSSACPKVIYIFARASTEPGNMGISAGPIVADALERIYGANDV 61 Query: 85 WVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAG 144 WVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAG Sbjct: 62 WVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAG 121 Query: 145 SISGLSTTIKNQIKGVVLFGYTKNLQNLGRIPNFETSKTEVYCDIADAVCYGTLFILPAH 204 SISGLSTTIKNQIKGVVLFGYTKNLQNLGRIPNFETSKTEVYCDIADAVCYGTLFILPAH Sbjct: 122 SISGLSTTIKNQIKGVVLFGYTKNLQNLGRIPNFETSKTEVYCDIADAVCYGTLFILPAH 181 Query: 205 FLYQTDAAVAAPRFLQARIG 224 FLYQTDAAVAAPRFLQARIG Sbjct: 182 FLYQTDAAVAAPRFLQARIG 201 >4OYY-A nrPDB Length = 194 Score = 235 bits (599), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 111/188 (59%), Positives = 139/188 (73%), Gaps = 2/188 (1%) Query: 36 NELETGSSSACPKVIYIFARASTEPGNMGISAGPIVADALERIYGANNVWVQGVGGPYLA 95 N LE+GS++ACP I IFAR STEPGNMGI+ GP +A+ LE N+W+QGVGGPY A Sbjct: 7 NGLESGSANACPDAILIFARGSTEPGNMGITVGPALANGLESHI--RNIWIQGVGGPYDA 64 Query: 96 DLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTTIKN 155 LA+NFLP GTS A I+E +RLF LAN KCPN +V+GGYSQG A++A ++S LS +K Sbjct: 65 ALATNFLPRGTSQANIDEGKRLFALANQKCPNTPVVAGGYSQGAALIAAAVSELSGAVKE 124 Query: 156 QIKGVVLFGYTKNLQNLGRIPNFETSKTEVYCDIADAVCYGTLFILPAHFLYQTDAAVAA 215 Q+KGV LFGYT+NLQN G IPN+ +T+V+C++ DAVC GTL I PAH Y +A A Sbjct: 125 QVKGVALFGYTQNLQNRGGIPNYPRERTKVFCNVGDAVCTGTLIITPAHLSYTIEARGEA 184 Query: 216 PRFLQARI 223 RFL+ RI Sbjct: 185 ARFLRDRI 192 >5AJH-A nrPDB Length = 226 Score = 211 bits (537), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 105/201 (52%), Positives = 136/201 (67%), Gaps = 4/201 (1%) Query: 22 ETGVALETRQ---SSTRNELETGSSSACPKVIYIFARASTEPGNMGISAGPIVADALERI 78 + ALE RQ S TRN+L G+S +CP VI+I+AR STE GN+G + GP VA LE Sbjct: 6 QDAAALEARQLGGSITRNDLANGNSGSCPGVIFIYARGSTESGNLG-TLGPRVASKLEAK 64 Query: 79 YGANNVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQG 138 YG N VW+QGVGG Y A L N LP GTSSAAI E F+ AN KCP+A +++GGYSQG Sbjct: 65 YGKNGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGHFSDANQKCPDAVLIAGGYSQG 124 Query: 139 TAVMAGSISGLSTTIKNQIKGVVLFGYTKNLQNLGRIPNFETSKTEVYCDIADAVCYGTL 198 A+ A S++ + I+ +I G VLFGYTKNLQN G+IP++ +T+V+C+ D VC G+L Sbjct: 125 AALAAASVTDVDAGIREKIAGAVLFGYTKNLQNRGKIPSYPEDRTKVFCNTGDLVCTGSL 184 Query: 199 FILPAHFLYQTDAAVAAPRFL 219 + H YQ+ A+ AAP FL Sbjct: 185 IVAAPHLAYQSAASGAAPEFL 205 >1CUU-A nrPDB Length = 214 Score = 207 bits (526), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 102/199 (51%), Positives = 134/199 (67%), Gaps = 3/199 (1%) Query: 27 LETRQ--SSTRNELETGSSSACPKVIYIFARASTEPGNMGISAGPIVADALERIYGANNV 84 LE RQ +TR++L G+S++C VI+I+AR STE GN+G + GP +A LE +G + V Sbjct: 10 LEARQLGRTTRDDLINGNSASCADVIFIYARGSTETGNLG-TLGPSIASNLESAFGKDGV 68 Query: 85 WVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAG 144 W+QGVGG Y A L N LP GTSSAAI E LF ANTKCP+A +++GGYSQG A+ A Sbjct: 69 WIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATLIAGGYSQGAALAAA 128 Query: 145 SISGLSTTIKNQIKGVVLFGYTKNLQNLGRIPNFETSKTEVYCDIADAVCYGTLFILPAH 204 SI L + I+++I G VLFGYTKNLQN GRIPN+ +T+V+C+ D VC G+L + H Sbjct: 129 SIEDLDSAIRDKIAGTVLFGYTKNLQNRGRIPNYPADRTKVFCNTGDLVCTGSLIVAAPH 188 Query: 205 FLYQTDAAVAAPRFLQARI 223 Y DA P FL ++ Sbjct: 189 LAYGPDARGPCPEFLIEKV 207 >5X88-A nrPDB Length = 199 Score = 195 bits (495), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 104/187 (55%), Positives = 122/187 (65%), Gaps = 6/187 (3%) Query: 25 VALETRQ--SSTRNELETGSSSACPKVIYIFARASTEPGNMGISAGPIVADALERIYGAN 82 VA+E RQ N+L G C + +IFAR STEPG MGI+ GP D L R + Sbjct: 3 VAVEKRQIFGPGDNDLRDGP---CKDITFIFARGSTEPGLMGITVGPDTCDELNREF-RG 58 Query: 83 NVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVM 142 V QGVG Y A LA NFLP GT+ AAI+EA LF LA+TKCPN IV GGYSQG AVM Sbjct: 59 RVACQGVGPRYEASLAGNFLPRGTTQAAIDEAAELFNLAHTKCPNTQIVGGGYSQGAAVM 118 Query: 143 AGSISGLSTTIKNQIKGVVLFGYTKNLQNLGRIPNFETSKTEVYCDIADAVCYGTLFILP 202 G+I GLS +K+QIKGVVL+G T+N Q+ GRIPNF T KT + C+ D VC GTL + Sbjct: 119 HGAIPGLSNAVKDQIKGVVLYGDTRNEQDGGRIPNFPTDKTNIICNPGDLVCDGTLILTA 178 Query: 203 AHFLYQT 209 AHF Y T Sbjct: 179 AHFTYGT 185 >3QPD-A nrPDB Length = 187 Score = 186 bits (473), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 97/184 (52%), Positives = 123/184 (66%), Gaps = 4/184 (2%) Query: 36 NELETGSSSACPKVIYIFARASTEPGNMGISAGPIVADALERIYGANNVWVQGVGGPYLA 95 +EL G C + +IFARASTEPG +GIS GP V + L ++ + +V QGVG Y A Sbjct: 5 DELRDGP---CKPITFIFARASTEPGLLGISTGPAVCNRL-KLARSGDVACQGVGPRYTA 60 Query: 96 DLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTTIKN 155 DL SN LP+GTS AAI EA+ LF A +KCP+ IV+GGYSQGTAVM G+I LS +++ Sbjct: 61 DLPSNALPEGTSQAAIAEAQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSADVQD 120 Query: 156 QIKGVVLFGYTKNLQNLGRIPNFETSKTEVYCDIADAVCYGTLFILPAHFLYQTDAAVAA 215 +IKGVVLFGYT+N Q G+I NF K +VYC + D VC GTL + P HF Y +D A+ Sbjct: 121 KIKGVVLFGYTRNAQERGQIANFPKDKVKVYCAVGDLVCLGTLIVAPPHFSYLSDTGDAS 180 Query: 216 PRFL 219 L Sbjct: 181 DFLL 184 >4PSD-A nrPDB Length = 254 Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 64/173 (36%), Positives = 92/173 (53%), Gaps = 14/173 (8%) Query: 46 CPKVIYIFARASTEPGNMGISAGPIVADALERIYGANNVWVQGVGGPYLADLASNFLPDG 105 C V +FAR + +PGN+G+ GP D+L+ G+ + V+GV PY A + +FL G Sbjct: 79 CGDVTVLFARGTCDPGNVGVLVGPWFFDSLQTALGSRTLGVKGV--PYPASV-QDFL-SG 134 Query: 106 TSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFG- 164 + IN A ++ ++ + CPN +V GGYSQG+ V+ + S L ++I VVLFG Sbjct: 135 SVQNGINMANQIKSVLQS-CPNTKLVLGGYSQGSMVVHNAASNLDAATMSKISAVVLFGD 193 Query: 165 --YTKNLQNLGRIPNFETSKTEVYCDIADAVCYGTLFILPAHFLYQTDAAVAA 215 Y K + NF+ +KT V C D +C G IL H Y DA AA Sbjct: 194 PYYGK------PVANFDAAKTLVVCHDGDNICQGGDIILLPHLTYAEDADTAA 240 >3AJA-A nrPDB Length = 302 Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust. Identities = 38/163 (23%), Positives = 64/163 (39%), Gaps = 27/163 (16%) Query: 34 TRNELETGSSSACPKVIYIFARASTE---------PGNMGISAGPIVADALERIYGANNV 84 TR S+ CP V+ + + E P +S ++ L +G + + Sbjct: 26 TRKPRPEFQSADCPDVMMVSIPGTWESSPTDDPFNPTQFPLSLMSNISKPLAEQFGPDRL 85 Query: 85 WVQGVGGPYLADLASNFLPDGTSSAAINEAR--------RLFTLANTKCPNAAIVSGGYS 136 V PY A + F D + N++R + T N +CP + V G+S Sbjct: 86 QVYTT--PYTAQFHNPFAAD--KQMSYNDSRAEGMRTTVKAMTDMNDRCPLTSYVIAGFS 141 Query: 137 QGTAVMAGSI-----SGLSTTIKNQIKGVVLFGYTKNLQNLGR 174 QG AV+AG I +G ++ + GV L + +G+ Sbjct: 142 QG-AVIAGDIASDIGNGRGPVDEDLVLGVTLIADGRRQMGVGQ 183 >5WUT-A nrPDB Length = 235 Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 9/88 (10%) Query: 80 GANNVWVQGVGGPYLADLASNF-LPDGTSSAAI-NEARRLFTLANTKCPNAAIVSGGYSQ 137 G VW + G L NF L DG + N R+L+T N K N +V + Sbjct: 4 GKKLVWEEHFNGKELDTKNWNFELGDGCPNCGWGNSERQLYTKTNHKMENGKLVITAKKE 63 Query: 138 GTAVMAGSISGLSTTIKNQIKGVVLFGY 165 GT ST I Q K +GY Sbjct: 64 GTQYT-------STRITTQGKKEFQYGY 84 >1BS9-A nrPDB Length = 207 Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 34/146 (23%) Query: 109 AAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISG--------------LSTTIK 154 AA+ A F N++CP+ IV GYSQG +M ++ G LS++ Sbjct: 66 AAVASAVNSF---NSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAV 122 Query: 155 NQIKGVVLFG---------YTKNLQNLG----RIPNFET---SKTEVYCDIADAVCYGTL 198 N +K + G Y G R F +K + YCD +D C Sbjct: 123 NMVKAAIFMGDPMFRAGLSYEVGTCAAGGFDQRPAGFSCPSAAKIKSYCDASDPYCCNGS 182 Query: 199 FILPAHFLYQTDAAVAAPRFLQARIG 224 H Y ++ A F+++++G Sbjct: 183 NAA-THQGYGSEYGSQALAFVKSKLG 207 >5YYC-A nrPDB Length = 369 Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust. Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Query: 38 LETGSSSACPKVIYIFARASTEPGNMGISAGPIVADALERIYGANNVWVQGV 89 LE S + P ++I + T G +G+ + D + +Y NN+ V+G+ Sbjct: 117 LEVASEAESPIKVHI--KTETGMGRVGVQTKEELLDVMTPLYHHNNIEVEGI 166 >2IV0-A nrPDB Length = 412 Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 26/65 (40%), Gaps = 6/65 (9%) Query: 71 VADALERIYGANNVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAAI 130 V DA G VW Q G L N+LPD T + AI E R K P Sbjct: 49 VLDAAADKIGKEVVWFQVYAGEDAYKLYGNYLPDDTLN-AIKEFR-----VALKGPLTTP 102 Query: 131 VSGGY 135 V GGY Sbjct: 103 VGGGY 107 >5Y3M-A nrPDB Length = 801 Score = 27.3 bits (59), Expect = 5.1, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 15/109 (13%) Query: 78 IYGANNVWVQGVGGPYLADLASNFLPDGTSSAAI-NEARRLFTLANTKCPNAAIVSGGYS 136 +Y W +G+G + DL+ NFL D + I N+ +L L +S Y Sbjct: 275 LYKLEKDWFRGLGRLQVLDLSENFLYDYITKTTIFNDLTQLRRLN---------LSFNYH 325 Query: 137 QGTAV----MAGSISGLSTTIKNQIKGVVLFGYTK-NLQNLGRIPNFET 180 + + +A S L + K + G+ T LQ+L R+P ++ Sbjct: 326 KKVSFAHLHLASSFGSLVSLEKLDMHGIFFRSLTNITLQSLTRLPKLQS 374 >4IAO-A nrPDB Length = 492 Score = 26.9 bits (58), Expect = 6.3, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Query: 147 SGLSTTIKN-QIKGVVLFGYTKNLQNLGRIPNFETSK-TEVYCDIADAVCYGTLFILPAH 204 S L + IK Q+KG +L YT+N+ NL T K + + A A C + LP Sbjct: 253 SPLHSFIKMLQMKGKLLRNYTQNIDNLESYAGISTDKLVQCHGSFATATCVTCHWNLPGE 312 Query: 205 FLYQTDAAVAAP 216 ++ + P Sbjct: 313 RIFNKIRNLELP 324 >3NTX-A nrPDB Length = 341 Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust. Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%) Query: 123 TKCPNAAIVSGGYSQGTAV-MAGSISGLSTTIK 154 T+C + ++ GGY+ G A+ AG ISG T++ Sbjct: 274 TQCISGSVNMGGYATGNALAQAGVISGFDMTVE 306 >5Y3K-A nrPDB Length = 802 Score = 26.9 bits (58), Expect = 6.6, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 13/107 (12%) Query: 78 IYGANNVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQ 137 +Y N W +G+G + DL+ NFL D I + + LA + N +S Y + Sbjct: 275 LYQLNPRWFRGLGNLTVLDLSENFLYD-----CITKTKAFQGLAQLRRLN---LSFNYHK 326 Query: 138 GTA----VMAGSISGLSTTIKNQIKGVVLFGYT-KNLQNLGRIPNFE 179 + +A S L + + + G+ + K LQ L R+P + Sbjct: 327 KVSFAHLTLAPSFGSLLSLQELDMHGIFFRSLSQKTLQPLARLPMLQ 373 >2HJH-A nrPDB Length = 354 Score = 26.9 bits (58), Expect = 7.1, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Query: 147 SGLSTTIKN-QIKGVVLFGYTKNLQNLGRIPNFETSK-TEVYCDIADAVCYGTLFILPAH 204 S L + IK Q+KG +L YT+N+ NL T K + + A A C + LP Sbjct: 115 SPLHSFIKMLQMKGKLLRNYTQNIDNLESYAGISTDKLVQCHGSFATATCVTCHWNLPGE 174 Query: 205 FLYQTDAAVAAP 216 ++ + P Sbjct: 175 RIFNKIRNLELP 186 >5H82-A nrPDB Length = 389 Score = 26.9 bits (58), Expect = 7.3, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Query: 41 GSSSACPKVIYIFARASTEPGNMGISAGPIVADALERIYGA 81 G CPKVIY A ++ N G + D +RIYG Sbjct: 128 GLEPYCPKVIYTDGTAFSDENNT--VYGDVSGDGEDRIYGG 166 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3DD5-A nrPDB 314 2e-86 1CUU-A nrPDB 286 3e-78 5X88-A nrPDB 280 3e-76 4OYY-A nrPDB 280 4e-76 5AJH-A nrPDB 279 7e-76 3QPD-A nrPDB 259 9e-70 4PSD-A nrPDB 207 3e-54 Sequences not found previously or not previously below threshold: 3AJA-A nrPDB 42 3e-04 1BS9-A nrPDB 42 3e-04 2IV0-A nrPDB 32 0.31 3WCH-A nrPDB 30 0.62 1FJ2-A nrPDB 30 0.74 3A2B-A nrPDB 28 2.9 3LM6-A nrPDB 28 3.7 6HAQ-A nrPDB 27 5.5 5YL7-A nrPDB 27 8.5 >3DD5-A nrPDB Length = 201 Score = 314 bits (804), Expect = 2e-86, Method: Composition-based stats. Identities = 194/201 (96%), Positives = 197/201 (98%) Query: 24 GVALETRQSSTRNELETGSSSACPKVIYIFARASTEPGNMGISAGPIVADALERIYGANN 83 +A+ QSSTRNELETGSSSACPKVIYIFARASTEPGNMGISAGPIVADALERIYGAN+ Sbjct: 1 AMAISDPQSSTRNELETGSSSACPKVIYIFARASTEPGNMGISAGPIVADALERIYGAND 60 Query: 84 VWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMA 143 VWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMA Sbjct: 61 VWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMA 120 Query: 144 GSISGLSTTIKNQIKGVVLFGYTKNLQNLGRIPNFETSKTEVYCDIADAVCYGTLFILPA 203 GSISGLSTTIKNQIKGVVLFGYTKNLQNLGRIPNFETSKTEVYCDIADAVCYGTLFILPA Sbjct: 121 GSISGLSTTIKNQIKGVVLFGYTKNLQNLGRIPNFETSKTEVYCDIADAVCYGTLFILPA 180 Query: 204 HFLYQTDAAVAAPRFLQARIG 224 HFLYQTDAAVAAPRFLQARIG Sbjct: 181 HFLYQTDAAVAAPRFLQARIG 201 >1CUU-A nrPDB Length = 214 Score = 286 bits (733), Expect = 3e-78, Method: Composition-based stats. Identities = 102/202 (50%), Positives = 134/202 (66%), Gaps = 3/202 (1%) Query: 24 GVALETRQ--SSTRNELETGSSSACPKVIYIFARASTEPGNMGISAGPIVADALERIYGA 81 LE RQ +TR++L G+S++C VI+I+AR STE GN+G + GP +A LE +G Sbjct: 7 AQELEARQLGRTTRDDLINGNSASCADVIFIYARGSTETGNLG-TLGPSIASNLESAFGK 65 Query: 82 NNVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAV 141 + VW+QGVGG Y A L N LP GTSSAAI E LF ANTKCP+A +++GGYSQG A+ Sbjct: 66 DGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGLFQQANTKCPDATLIAGGYSQGAAL 125 Query: 142 MAGSISGLSTTIKNQIKGVVLFGYTKNLQNLGRIPNFETSKTEVYCDIADAVCYGTLFIL 201 A SI L + I+++I G VLFGYTKNLQN GRIPN+ +T+V+C+ D VC G+L + Sbjct: 126 AAASIEDLDSAIRDKIAGTVLFGYTKNLQNRGRIPNYPADRTKVFCNTGDLVCTGSLIVA 185 Query: 202 PAHFLYQTDAAVAAPRFLQARI 223 H Y DA P FL ++ Sbjct: 186 APHLAYGPDARGPCPEFLIEKV 207 >5X88-A nrPDB Length = 199 Score = 280 bits (716), Expect = 3e-76, Method: Composition-based stats. Identities = 107/201 (53%), Positives = 128/201 (63%), Gaps = 7/201 (3%) Query: 25 VALETRQ--SSTRNELETGSSSACPKVIYIFARASTEPGNMGISAGPIVADALERIYGAN 82 VA+E RQ N+L G C + +IFAR STEPG MGI+ GP D L R + Sbjct: 3 VAVEKRQIFGPGDNDLRDGP---CKDITFIFARGSTEPGLMGITVGPDTCDELNREF-RG 58 Query: 83 NVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVM 142 V QGVG Y A LA NFLP GT+ AAI+EA LF LA+TKCPN IV GGYSQG AVM Sbjct: 59 RVACQGVGPRYEASLAGNFLPRGTTQAAIDEAAELFNLAHTKCPNTQIVGGGYSQGAAVM 118 Query: 143 AGSISGLSTTIKNQIKGVVLFGYTKNLQNLGRIPNFETSKTEVYCDIADAVCYGTLFILP 202 G+I GLS +K+QIKGVVL+G T+N Q+ GRIPNF T KT + C+ D VC GTL + Sbjct: 119 HGAIPGLSNAVKDQIKGVVLYGDTRNEQDGGRIPNFPTDKTNIICNPGDLVCDGTLILTA 178 Query: 203 AHFLYQTDAAVAAPRFLQARI 223 AHF Y T A +L+ R+ Sbjct: 179 AHFTYGTRVRGAVD-WLEDRL 198 >4OYY-A nrPDB Length = 194 Score = 280 bits (715), Expect = 4e-76, Method: Composition-based stats. Identities = 111/192 (57%), Positives = 140/192 (72%), Gaps = 2/192 (1%) Query: 32 SSTRNELETGSSSACPKVIYIFARASTEPGNMGISAGPIVADALERIYGANNVWVQGVGG 91 + N LE+GS++ACP I IFAR STEPGNMGI+ GP +A+ LE N+W+QGVGG Sbjct: 3 GAIENGLESGSANACPDAILIFARGSTEPGNMGITVGPALANGLESHI--RNIWIQGVGG 60 Query: 92 PYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLST 151 PY A LA+NFLP GTS A I+E +RLF LAN KCPN +V+GGYSQG A++A ++S LS Sbjct: 61 PYDAALATNFLPRGTSQANIDEGKRLFALANQKCPNTPVVAGGYSQGAALIAAAVSELSG 120 Query: 152 TIKNQIKGVVLFGYTKNLQNLGRIPNFETSKTEVYCDIADAVCYGTLFILPAHFLYQTDA 211 +K Q+KGV LFGYT+NLQN G IPN+ +T+V+C++ DAVC GTL I PAH Y +A Sbjct: 121 AVKEQVKGVALFGYTQNLQNRGGIPNYPRERTKVFCNVGDAVCTGTLIITPAHLSYTIEA 180 Query: 212 AVAAPRFLQARI 223 A RFL+ RI Sbjct: 181 RGEAARFLRDRI 192 >5AJH-A nrPDB Length = 226 Score = 279 bits (713), Expect = 7e-76, Method: Composition-based stats. Identities = 105/204 (51%), Positives = 137/204 (67%), Gaps = 4/204 (1%) Query: 22 ETGVALETRQ---SSTRNELETGSSSACPKVIYIFARASTEPGNMGISAGPIVADALERI 78 + ALE RQ S TRN+L G+S +CP VI+I+AR STE GN+G + GP VA LE Sbjct: 6 QDAAALEARQLGGSITRNDLANGNSGSCPGVIFIYARGSTESGNLG-TLGPRVASKLEAK 64 Query: 79 YGANNVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQG 138 YG N VW+QGVGG Y A L N LP GTSSAAI E F+ AN KCP+A +++GGYSQG Sbjct: 65 YGKNGVWIQGVGGAYRATLGDNALPRGTSSAAIREMLGHFSDANQKCPDAVLIAGGYSQG 124 Query: 139 TAVMAGSISGLSTTIKNQIKGVVLFGYTKNLQNLGRIPNFETSKTEVYCDIADAVCYGTL 198 A+ A S++ + I+ +I G VLFGYTKNLQN G+IP++ +T+V+C+ D VC G+L Sbjct: 125 AALAAASVTDVDAGIREKIAGAVLFGYTKNLQNRGKIPSYPEDRTKVFCNTGDLVCTGSL 184 Query: 199 FILPAHFLYQTDAAVAAPRFLQAR 222 + H YQ+ A+ AAP FL + Sbjct: 185 IVAAPHLAYQSAASGAAPEFLIQK 208 >3QPD-A nrPDB Length = 187 Score = 259 bits (661), Expect = 9e-70, Method: Composition-based stats. Identities = 97/187 (51%), Positives = 124/187 (66%), Gaps = 4/187 (2%) Query: 33 STRNELETGSSSACPKVIYIFARASTEPGNMGISAGPIVADALERIYGANNVWVQGVGGP 92 + +EL G C + +IFARASTEPG +GIS GP V + L ++ + +V QGVG Sbjct: 2 TGGDELRDGP---CKPITFIFARASTEPGLLGISTGPAVCNRL-KLARSGDVACQGVGPR 57 Query: 93 YLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTT 152 Y ADL SN LP+GTS AAI EA+ LF A +KCP+ IV+GGYSQGTAVM G+I LS Sbjct: 58 YTADLPSNALPEGTSQAAIAEAQGLFEQAVSKCPDTQIVAGGYSQGTAVMNGAIKRLSAD 117 Query: 153 IKNQIKGVVLFGYTKNLQNLGRIPNFETSKTEVYCDIADAVCYGTLFILPAHFLYQTDAA 212 ++++IKGVVLFGYT+N Q G+I NF K +VYC + D VC GTL + P HF Y +D Sbjct: 118 VQDKIKGVVLFGYTRNAQERGQIANFPKDKVKVYCAVGDLVCLGTLIVAPPHFSYLSDTG 177 Query: 213 VAAPRFL 219 A+ L Sbjct: 178 DASDFLL 184 >4PSD-A nrPDB Length = 254 Score = 207 bits (527), Expect = 3e-54, Method: Composition-based stats. Identities = 76/227 (33%), Positives = 112/227 (49%), Gaps = 27/227 (11%) Query: 2 KFLS----VLSLAITLAAAAPV--EVETGVALETRQSSTRNELETGSSSACPKVIYIFAR 55 +FLS V+ + T+ AA + + E A S T N+ C V +FAR Sbjct: 36 EFLSELAKVMPIGDTITAACDLISDGEDAAASLFGISETEND-------PCGDVTVLFAR 88 Query: 56 ASTEPGNMGISAGPIVADALERIYGANNVWVQGVGGPYLADLASNFLPDGTSSAAINEAR 115 + +PGN+G+ GP D+L+ G+ + V+GV PY A + +FL G+ IN A Sbjct: 89 GTCDPGNVGVLVGPWFFDSLQTALGSRTLGVKGV--PYPASV-QDFL-SGSVQNGINMAN 144 Query: 116 RLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLFG---YTKNLQNL 172 ++ ++ + CPN +V GGYSQG+ V+ + S L ++I VVLFG Y K Sbjct: 145 QIKSVLQS-CPNTKLVLGGYSQGSMVVHNAASNLDAATMSKISAVVLFGDPYYGK----- 198 Query: 173 GRIPNFETSKTEVYCDIADAVCYGTLFILPAHFLYQTDAAVAAPRFL 219 + NF+ +KT V C D +C G IL H Y DA AA + Sbjct: 199 -PVANFDAAKTLVVCHDGDNICQGGDIILLPHLTYAEDADTAAAFVV 244 >3AJA-A nrPDB Length = 302 Score = 41.6 bits (96), Expect = 3e-04, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 55/151 (36%), Gaps = 21/151 (13%) Query: 43 SSACPKVIYIFARASTE---------PGNMGISAGPIVADALERIYGANNVWVQGVGGPY 93 S+ CP V+ + + E P +S ++ L +G + + Q PY Sbjct: 35 SADCPDVMMVSIPGTWESSPTDDPFNPTQFPLSLMSNISKPLAEQFGPDRL--QVYTTPY 92 Query: 94 LADLASNFLPDGTSSAAINEARRL------FTLANTKCPNAAIVSGGYSQGTAVMAGSIS 147 A + F D S + A + T N +CP + V G+SQG + S Sbjct: 93 TAQFHNPFAADKQMSYNDSRAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIAS 152 Query: 148 GLSTTI----KNQIKGVVLFGYTKNLQNLGR 174 + ++ + GV L + +G+ Sbjct: 153 DIGNGRGPVDEDLVLGVTLIADGRRQMGVGQ 183 >1BS9-A nrPDB Length = 207 Score = 41.6 bits (96), Expect = 3e-04, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 62/190 (32%), Gaps = 45/190 (23%) Query: 79 YGANNVWVQGVGGPYLADLA--------------SNFLPDGTSSAAINEARRLFTLANTK 124 YG+++ V GV Y A + + I N++ Sbjct: 19 YGSSSTVVNGVLSAYPGSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQ 78 Query: 125 CPNAAIVSGGYSQGTAVMAGSISG--------------LSTTIKNQIKGVVLFGY----- 165 CP+ IV GYSQG +M ++ G LS++ N +K + G Sbjct: 79 CPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPMFRA 138 Query: 166 -----------TKNLQNLGRIPNFETSKTEVYCDIADAVCYGTLFILPAHFLYQTDAAVA 214 Q +K + YCD +D C H Y ++ Sbjct: 139 GLSYEVGTCAAGGFDQRPAGFSCPSAAKIKSYCDASDPYCCNGS-NAATHQGYGSEYGSQ 197 Query: 215 APRFLQARIG 224 A F+++++G Sbjct: 198 ALAFVKSKLG 207 >2IV0-A nrPDB Length = 412 Score = 31.6 bits (70), Expect = 0.31, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 6/66 (9%) Query: 70 IVADALERIYGANNVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAA 129 V DA G VW Q G L N+LPD T AI E F +A K P Sbjct: 48 RVLDAAADKIGKEVVWFQVYAGEDAYKLYGNYLPDDTL-NAIKE----FRVA-LKGPLTT 101 Query: 130 IVSGGY 135 V GGY Sbjct: 102 PVGGGY 107 >3WCH-A nrPDB Length = 360 Score = 30.5 bits (67), Expect = 0.62, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 40/125 (32%), Gaps = 9/125 (7%) Query: 70 IVADALERIYGANNVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCPNAA 129 I+ D LE G W Q V Y+ L LP+ A+ L T A P+ Sbjct: 206 IIRDYLEDQQGGREFWPQEVWSRYVKKLGDFALPE-NIDLAVQCLNELITNALHHIPDVI 264 Query: 130 IVSGGYSQGTAVMAGSISG------LSTTIKNQ--IKGVVLFGYTKNLQNLGRIPNFETS 181 + +I L+ NQ KG VL + + + N Sbjct: 265 TYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVLIRLGQAVTLMMDATNMPAV 324 Query: 182 KTEVY 186 K +Y Sbjct: 325 KAIIY 329 >1FJ2-A nrPDB Length = 232 Score = 30.1 bits (66), Expect = 0.74, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 8/91 (8%) Query: 104 DGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSISGLSTTIKNQIKGVVLF 163 G AA N + P+ I+ GG+SQG A+ + T + ++ GV Sbjct: 89 SGIKQAAENIKALIDQEVKNGIPSNRIILGGFSQGGALSLYTA----LTTQQKLAGVTAL 144 Query: 164 GY---TKNLQNLGRIPNFETSKTEVYCDIAD 191 + G I + + C D Sbjct: 145 SCWLPLRASFPQGPIGGANRDISILQCH-GD 174 >3A2B-A nrPDB Length = 398 Score = 28.1 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 8/73 (10%), Positives = 18/73 (24%), Gaps = 4/73 (5%) Query: 143 AGSISGLSTTIKNQIKGVVLFGYTKNLQNLGRIPNFETSKTEVYCDIADAVCYGTLFILP 202 SI + V+ +G+ ++ ++ C G + Sbjct: 137 HASIID---GSRLSFSKVIKYGHNNMEDLRAKLSRLPEDSAKLICTDGIFSMEG-DIVNL 192 Query: 203 AHFLYQTDAAVAA 215 + AA Sbjct: 193 PELTSIANEFDAA 205 >3LM6-A nrPDB Length = 346 Score = 27.8 bits (60), Expect = 3.7, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 26/130 (20%) Query: 17 APVEVETGVALETRQSSTRNELETGSSSACPKVIYIFARASTEPGNMGISAGPIVADALE 76 A V A+ Q+ ++ + + + T+P +MG + P AD ++ Sbjct: 161 ATSTVTGSGAVVISQTPGDIQITSATVGKVSDL------GITDPFDMGSAMAPAAADTIK 214 Query: 77 RIYGANNVW-----------VQGVGGPYLAD-LASNFLPDGTSSAAINEARRLFTLANTK 124 + + N + GVG P + D L + P GT + ++T Sbjct: 215 QHFKDLNRTADDYDLILTGDLSGVGSPIVKDILKEDGYPVGTKHD--DCGLLIYT----- 267 Query: 125 CPNAAIVSGG 134 P+ + +GG Sbjct: 268 -PDQQVFAGG 276 >6HAQ-A nrPDB Length = 229 Score = 27.4 bits (59), Expect = 5.5, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 53/160 (33%), Gaps = 8/160 (5%) Query: 9 LAITLAAAAPVEVETGVALETRQSSTRNELE--TGSSSACPKVIYIFARASTEPGNMGIS 66 L T+AA + +E + E+ L G + K F + + + G + S Sbjct: 65 LTATVAAGSQIEFQWTTWPESHHGPLITYLAPCNGDCATVDKTTLKFVKIAAQ-GLIDGS 123 Query: 67 AGPIVADALERIYGANNVWVQGVGGPYLADLASNFLPDGTSSAAINEARRLFTLANTKCP 126 P V E I N V + Y N++ A + +C Sbjct: 124 NPPGVWADDEMIANNNTATVT-IPASYA---PGNYVLRHEIIALHSAGNLNGAQNYPQCF 179 Query: 127 NAAIVSGGYSQGTAVMAGSI-SGLSTTIKNQIKGVVLFGY 165 N I GG +QG+ S+ IK I + GY Sbjct: 180 NIQITGGGSAQGSGTAGTSLYKNTDPGIKFDIYSDLSGGY 219 >5YL7-A nrPDB Length = 347 Score = 26.6 bits (57), Expect = 8.5, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Query: 90 GGPYLADLASNF--LPDGTSSAAINEARRLFTLANTKCPNAAIVSGGYSQGTAVMAGSIS 147 G Y ++ SN G + + N++ + + N+ + S GYSQGT++ A ++ Sbjct: 229 GRAYYSNYGSNIDVAAPGGAQSFANDSEGVLSTYNSGSSTPSSDSYGYSQGTSMAAPHVA 288 Query: 148 GLSTTIKN 155 G++ IK Sbjct: 289 GVAALIKQ 296 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.131 0.348 Lambda K H 0.267 0.0396 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,329,796 Number of Sequences: 36641 Number of extensions: 251300 Number of successful extensions: 723 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 686 Number of HSP's gapped (non-prelim): 41 length of query: 224 length of database: 10,336,785 effective HSP length: 93 effective length of query: 131 effective length of database: 6,929,172 effective search space: 907721532 effective search space used: 907721532 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 57 (26.6 bits)