BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P10820 (554 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3NSJ-A nrPDB 1120 0.0 4A5W-B nrPDB 80 2e-15 3OJY-A nrPDB 67 2e-11 2RD7-A nrPDB 64 1e-10 6H03-D nrPDB 57 2e-08 6H03-G nrPDB 56 3e-08 6CXO-A nrPDB 56 5e-08 2QQH-A nrPDB 49 5e-06 3OJY-B nrPDB 48 9e-06 6NYT-A nrPDB 39 0.004 4RJ9-A nrPDB 39 0.005 5UE8-A nrPDB 39 0.006 5A52-A nrPDB 38 0.010 1UW4-B nrPDB 33 0.41 4NPK-A nrPDB 32 0.77 5A50-A nrPDB 32 0.95 4P42-A nrPDB 31 1.3 1YI7-A nrPDB 30 1.9 1HKT-A nrPDB 29 4.1 4DNL-A nrPDB 29 4.9 3PFQ-A nrPDB 28 7.3 >3NSJ-A nrPDB Length = 540 Score = 1120 bits (2896), Expect = 0.0, Method: Compositional matrix adjust. Identities = 533/534 (99%), Positives = 533/534 (99%) Query: 21 PCYTATRSECKQKHKFVPGVWMAGEGMDVTTLRRSGSFPVNTQRFLRPDRTCTLCKNSLM 80 PCYTATRSECKQKHKFVPGVWMAGEGMDVTTLRRSGSFPVNTQRFLRPDRTCTLCKNSLM Sbjct: 1 PCYTATRSECKQKHKFVPGVWMAGEGMDVTTLRRSGSFPVNTQRFLRPDRTCTLCKNSLM 60 Query: 81 RDATQRLPVAITHWRPHSSHCQRNVAAAKVHSTEGVAREAAANINNDWRVGLDVNPRPEA 140 RDATQRLPVAITHWRPHSSHCQRNVAAAKVHSTEGVAREAAANINNDWRVGLDVNPRPEA Sbjct: 61 RDATQRLPVAITHWRPHSSHCQRNVAAAKVHSTEGVAREAAANINNDWRVGLDVNPRPEA 120 Query: 141 NMRASVAGSHSKVANFAAEKTYQDQYNFNSDTVECRMYSFRLVQKPPLHLDFKKALRALP 200 NMRASVAGSHSKVANFAAEKTYQDQYNFNSDTVECRMYSFRLVQKPPLHLDFKKALRALP Sbjct: 121 NMRASVAGSHSKVANFAAEKTYQDQYNFNSDTVECRMYSFRLVQKPPLHLDFKKALRALP 180 Query: 201 RNFNSSTEHAYHRLISSYGTHFITAVDLGGRISVLTALRTCQLTLNGLTADEVGDCLNVE 260 RNFNSSTEHAYH LISSYGTHFITAVDLGGRISVLTALRTCQLTLNGLTADEVGDCLNVE Sbjct: 181 RNFNSSTEHAYHELISSYGTHFITAVDLGGRISVLTALRTCQLTLNGLTADEVGDCLNVE 240 Query: 261 AQVSIGAQASVSSEYKACEEKKKQHKMATSFHQTYRERHVEVLGGPLDSTHDLLFGNQAT 320 AQVSIGAQASVSSEYKACEEKKKQHKMATSFHQTYRERHVEVLGGPLDSTHDLLFGNQAT Sbjct: 241 AQVSIGAQASVSSEYKACEEKKKQHKMATSFHQTYRERHVEVLGGPLDSTHDLLFGNQAT 300 Query: 321 PEQFSTWTASLPSNPGLVDYSLEPLHTLLEEQNPKREALRQAISHYIMSRARWQNCSRPC 380 PEQFSTWTASLPSNPGLVDYSLEPLHTLLEEQNPKREALRQAISHYIMSRARWQNCSRPC Sbjct: 301 PEQFSTWTASLPSNPGLVDYSLEPLHTLLEEQNPKREALRQAISHYIMSRARWQNCSRPC 360 Query: 381 RSGQHKSSHDSCQCECQDSKVTNQDCCPRQRGLAHLVVSNFRAEHLWGDYTTATDAYLKV 440 RSGQHKSSHDSCQCECQDSKVTNQDCCPRQRGLAHLVVSNFRAEHLWGDYTTATDAYLKV Sbjct: 361 RSGQHKSSHDSCQCECQDSKVTNQDCCPRQRGLAHLVVSNFRAEHLWGDYTTATDAYLKV 420 Query: 441 FFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRSP 500 FFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRSP Sbjct: 421 FFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRSP 480 Query: 501 HSGFHEVTCELNHGRVKFSYHAKCLPHLTGGTCLEYAPQGLLGDPPGNRSGAVW 554 HSGFHEVTCELNHGRVKFSYHAKCLPHLTGGTCLEYAPQGLLGDPPGNRSGAVW Sbjct: 481 HSGFHEVTCELNHGRVKFSYHAKCLPHLTGGTCLEYAPQGLLGDPPGNRSGAVW 534 >4A5W-B nrPDB Length = 913 Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 72/266 (27%), Positives = 114/266 (42%), Gaps = 30/266 (11%) Query: 142 MRASVAGSHSKVANFAAEKTYQDQYNFNSDTVECRMYSFRLVQKPPLHLD--FKKALRAL 199 + ++ SH K ++F NF + + LHL F KAL L Sbjct: 278 FKQAIQASHKKDSSFIRIHKVMKVLNFTTKAKD-------------LHLSDVFLKALNHL 324 Query: 200 PRNFNSSTEHAYHRLISSYGTHFITAVDLGGRISVLTALRTCQLTLNGLTADEVGDCLNV 259 P +NS+ Y R+ +GTH+ T+ LGG +L + +L +GLT +E C+ + Sbjct: 325 PLEYNSA---LYSRIFDDFGTHYFTSGSLGGVYDLLYQFSSEELKNSGLTEEEAKHCVRI 381 Query: 260 EAQVSIGAQASVSSEYKACEEKKKQHKMATSFHQTYRERHVEVLGGPLDSTHDLLF--GN 317 E + + E++ C K K SF Q + + GG + L + G+ Sbjct: 382 ETKKRVLFAKKTKVEHR-CTTNKLSEKHEGSFIQGAEKSISLIRGGRSEYGAALAWEKGS 440 Query: 318 QATPEQ-FSTWTASLPSNPGLVDYSLEPLHTLLEE---QNPKREALRQAISHYIMSRARW 373 E+ FS W S+ NP ++D+ L P+ L+ KR LR+A+ Y A++ Sbjct: 441 SGLEEKTFSEWLESVKENPAVIDFELAPIVDLVRNIPCAVTKRNNLRKALQEYA---AKF 497 Query: 374 QNCS-RPC-RSGQHKSSHDSCQCECQ 397 C PC +G+ S C C CQ Sbjct: 498 DPCQCAPCPNNGRPTLSGTECLCVCQ 523 >3OJY-A nrPDB Length = 554 Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 66/285 (23%), Positives = 129/285 (45%), Gaps = 31/285 (10%) Query: 131 GLDVNPRPEAN-MRASVAGSHSKVANFAAE--KTYQDQYNFNSDTVECRMYSFRLVQKPP 187 G+ + P + + V SHS+ +F E K + ++ F + + F++ +K Sbjct: 219 GVTIGIGPAGSPLLVGVGVSHSQDTSFLNELNKYNEKKFIFTRIFTKVQTAHFKM-RKDD 277 Query: 188 LHLD--FKKALRALPRNFNSSTEHAYHRLISSYGTHFITAVDLGGRISVLTALRTCQLTL 245 + LD ++L LP +N Y + I+ YGTH+IT+ +GG + + ++ Sbjct: 278 IMLDEGMLQSLMELPDQYNYGM---YAKFINDYGTHYITSGSMGGIYEYILVIDKAKMES 334 Query: 246 NGLTADEVGDC------LNVEAQVSIGAQASVSSEYKACEEKKKQHKMATSFHQTYRERH 299 G+T+ ++ C + E ++++G S K K ++ + A + E Sbjct: 335 LGITSRDITTCFGGSLGIQYEDKINVGGGLSGDHCKKFGGGKTERARKAMAV-----EDI 389 Query: 300 VEVLGGPLDSTHDLLFGNQATPEQFSTWTASLPSNPGLVDYSLEPLHTLLEEQN-----P 354 + + G L N++T + +W SL NP ++D+ ++P+H +L + Sbjct: 390 ISRVRGGSSGWSGGLAQNRSTI-TYRSWGRSLKYNPVVIDFEMQPIHEVLRHTSLGPLEA 448 Query: 355 KREALRQAISHYIMSRARWQNC-SRPC-RSGQHKSSHDSCQCECQ 397 KR+ LR+A+ Y+M + C PC +G SC+C+C+ Sbjct: 449 KRQNLRRALDQYLM---EFNACRCGPCFNNGVPILEGTSCRCQCR 490 >2RD7-A nrPDB Length = 367 Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 57/256 (22%), Positives = 117/256 (45%), Gaps = 30/256 (11%) Query: 131 GLDVNPRPEAN-MRASVAGSHSKVANFAAE--KTYQDQYNFNSDTVECRMYSFRLVQKPP 187 G+ + P + + V SHS+ +F E K + ++ F + + F++ +K Sbjct: 124 GVTIGIGPAGSPLLVGVGVSHSQDTSFLNELNKYNEKKFIFTRIFTKVQTAHFKM-RKDD 182 Query: 188 LHLD--FKKALRALPRNFNSSTEHAYHRLISSYGTHFITAVDLGGRISVLTALRTCQLTL 245 + LD ++L LP +N Y + I+ YGTH+IT+ +GG + + ++ Sbjct: 183 IMLDEGMLQSLMELPDQYNYGM---YAKFINDYGTHYITSGSMGGIYEYILVIDKAKMES 239 Query: 246 NGLTADEVGDC------LNVEAQVSIGAQASVS--SEYKACEEKKKQHKMATSFHQTYRE 297 G+T+ ++ C + E ++++G S ++ + ++ + MA E Sbjct: 240 LGITSRDITTCFGGSLGIQYEDKINVGGGLSGDHCKKFGGGKTERARKAMAV-------E 292 Query: 298 RHVEVLGGPLDSTHDLLFGNQATPEQFSTWTASLPSNPGLVDYSLEPLHTLLEEQN---- 353 + + G L N++T + +W SL NP ++D+ ++P+H +L + Sbjct: 293 DIISRVRGGSSGWSGGLAQNRSTI-TYRSWGRSLKYNPVVIDFEMQPIHEVLRHTSLGPL 351 Query: 354 -PKREALRQAISHYIM 368 KR+ LR+A+ Y+M Sbjct: 352 EAKRQNLRRALDQYLM 367 >6H03-D nrPDB Length = 821 Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 21/215 (9%) Query: 192 FKKALRALPRNFNSSTEHAYHRLISSYGTHFITAVDLGGRISVLTALRTCQLTLNGLTAD 251 F K L LP ++ S AY RLI YGTH++ + LGG VL + + +L N + Sbjct: 254 FWKELSHLPSLYDYS---AYRRLIDQYGTHYLQSGSLGGEYRVLFYVDSEKLKQNDFNSV 310 Query: 252 EVGDCLNVEAQVSIGAQASVSSEYKACEEKKKQHKMATSFHQTYRERHVEVLGGPLDSTH 311 E C S G V C+E + K A+ + GG Sbjct: 311 EEKKC------KSSGWHFVVKFSSHGCKELENALKAASGTQNNVLRGEPFIRGGGAGFIS 364 Query: 312 DLLFGNQATP----EQFSTWTASLPSNPGLVDYSLEPLHTLLEE---QNPKREALRQAIS 364 L + P ++S W S+ + P ++ L PL+ L++E + K+ L+ A+ Sbjct: 365 GLSYLELDNPAGNKRRYSAWAESVTNLPQVIKQKLTPLYELVKEVPCASVKKLYLKWALE 424 Query: 365 HYIMSRARWQNC-SRPCRSGQHKSSHDS-CQCECQ 397 Y+ + C RPC++G + + C C C+ Sbjct: 425 EYL---DEFDPCHCRPCQNGGLATVEGTHCLCHCK 456 >6H03-G nrPDB Length = 538 Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 14/191 (7%) Query: 188 LHLDFKKALRALPRNFNSSTEHAYHRLISSYGTHFITAVDLGGRISVLTALRTCQLTLNG 247 L F ++ALP + Y + +YGTH+ ++ LGG ++ L + G Sbjct: 294 LTTTFVDDIKALPTTYEKG---EYFAFLETYGTHYSSSGSLGGLYELIYVLDKASMKRKG 350 Query: 248 LTADEVGDCLNVEAQVSIG-AQASVSSEYKACEEKKKQHKMATSF-HQTYRERHVEVLGG 305 + ++ CL VS+ ++ SV +E+ + K+ A + + + V ++ G Sbjct: 351 VELKDIKRCLGYHLDVSLAFSEISVGAEFNKDDCVKRGEGRAVNITSENLIDDVVSLIRG 410 Query: 306 -----PLDSTHDLLFGNQATPEQFSTWTASLPSNPGLVDYSLEPLHTL----LEEQNPKR 356 + LL G F W +S+ P L+ L P++ L ++ + K+ Sbjct: 411 GTRKYAFELKEKLLRGTVIDVTDFVNWASSINDAPVLISQKLSPIYNLVPVKMKNAHLKK 470 Query: 357 EALRQAISHYI 367 + L +AI YI Sbjct: 471 QNLERAIEDYI 481 >6CXO-A nrPDB Length = 529 Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 67/318 (21%), Positives = 128/318 (40%), Gaps = 40/318 (12%) Query: 114 EGVAREAAANINNDWRVGLDVNPRPEANM-RASVAGSHSKVANFAAE--------KTYQD 164 + + RE +N N D+ + PE S A SK + +A+ K ++ Sbjct: 202 KAINREKTSNFNADFALKFSATEVPEKGAGEVSPAEHSSKPTDISAKFKFSYFMGKNFRR 261 Query: 165 QYNFNSDTVECRMYSFRLVQ---------KPPLHLDFKKALRALPRNFNSSTEHAYHRLI 215 ++ S + + ++ +VQ L F ++ALP ++ Y + Sbjct: 262 LSSYFSQSKKMFVHLRGVVQLGRFVMRNRDVVLRSTFLDDVKALPTSYEKG---EYFGFL 318 Query: 216 SSYGTHFITAVDLGGRISVLTALRTCQLTLNGLTADEVGDCLNVEAQVSIGAQ-----AS 270 +YGTH+ T+ LGG+ ++ L + G+ ++V CL + I Q AS Sbjct: 319 ETYGTHYSTSGSLGGQYEIVYVLDKASMKEKGVDLNDVKHCLGFNMDLRIPLQDDLKDAS 378 Query: 271 VSSEYKA--CEEKKKQHKMATSFHQTYRERHVEVLGGPLDST----HDLLFGNQATPE-Q 323 V++ A C + + + + + GG + +L G++ + Sbjct: 379 VTASVNADGCIKTDNGKTVDITRDNIIDDVISFIRGGTREQAILLKEKILRGDKTFDKTD 438 Query: 324 FSTWTASLPSNPGLVDYSLEPLHTL----LEEQNPKREALRQAISHYIMSRARWQNCSRP 379 F+ W +SL + P L+ + P++ L +++ K++ L +A+ YI + C P Sbjct: 439 FANWASSLANAPALISQRMSPIYNLIPLKIKDAYIKKQNLEKAVEDYI-DEFSTKRCY-P 496 Query: 380 CRSGQHKSSHDS-CQCEC 396 C +G D C C C Sbjct: 497 CLNGGTIILLDGQCLCSC 514 >2QQH-A nrPDB Length = 334 Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 50/239 (20%), Positives = 98/239 (41%), Gaps = 44/239 (18%) Query: 142 MRASVAGSHSKVANFAAE--KTYQDQYNFNSDTVECRMYSFRLVQKPPLHLD--FKKALR 197 + V SHS+ +F E K + ++ F + + F++ +K + LD ++L Sbjct: 131 LLVGVGVSHSQDTSFLNELNKYNEKKFIFTRIFTKVQTAHFKM-RKDDIMLDEGMLQSLM 189 Query: 198 ALPRNFNSSTEHAYHRLISSYGTHFITAVDLGGRISVLTALRTCQLTLNGLTADEVGDCL 257 LP +N Y + I+ YGTH+IT+ +GG + L ++ + +G Sbjct: 190 ELPDQYNYGM---YAKFINDYGTHYITSGSMGGIYEYI-------LVIDKAKMESLGXXX 239 Query: 258 NVEAQVSIGAQASVSSEYKACEEKKKQHKMATSFHQTYRERHVEVLGGPLDSTHDLLFGN 317 A+ +++ E + + Q N Sbjct: 240 XXXXXXXXXARKAMAVEDIISRVRGGSSGWSGGLAQ-----------------------N 276 Query: 318 QATPEQFSTWTASLPSNPGLVDYSLEPLHTLLEEQN-----PKREALRQAISHYIMSRA 371 ++T + +W SL NP ++D+ ++P+H +L + KR+ LR+A+ Y+M+ A Sbjct: 277 RSTI-TYRSWGRSLKYNPVVIDFEMQPIHEVLRHTSLGPLEAKRQNLRRALDQYLMAAA 334 >3OJY-B nrPDB Length = 537 Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 42/197 (21%), Positives = 76/197 (38%), Gaps = 31/197 (15%) Query: 188 LHLDFKKALRALPRNFNSSTEHAYHRLISSYGTHFITAVDLGGRISVLTALRTCQLTLNG 247 LH +F + ++ LP ++ Y L +GTH+IT LGG + + Sbjct: 259 LHYEFLQRVKRLPLEYSYG---EYRDLFRDFGTHYITEAVLGGIYEYTLVMNKEAMERGD 315 Query: 248 LTADEVGDC-------------LNVEAQVSIGAQASVSSEYKACEEKKKQHKMATSFHQT 294 T + V C + V VS+G + +E K ++ K+ M Sbjct: 316 YTLNNVHACAKNDFKIGGAIEEVYVSLGVSVGKCRGILNEIK---DRNKRDTMVEDLV-- 370 Query: 295 YRERHVEVLGGPLDSTHDLLFGNQATPEQFSTWTASLPSNPGLVDYSLEPLHTLLEEQN- 353 V V GG + L + T + W ++ NP ++ +EPL+ L+ + Sbjct: 371 -----VLVRGGASEHITTLAYQELPTADLMQEWGDAVQYNPAIIKVKVEPLYELVTATDF 425 Query: 354 ----PKREALRQAISHY 366 R+ ++QA+ + Sbjct: 426 AYSSTVRQNMKQALEEF 442 >6NYT-A nrPDB Length = 148 Score = 39.3 bits (90), Expect = 0.004, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 429 DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDAD 485 D T ++D Y+ V G + RT ++ N NP W + FE ++ ++V+VWD D Sbjct: 33 DKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFE--CHNSSDRIKVRVWDED 87 >4RJ9-A nrPDB Length = 165 Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 3/65 (4%) Query: 433 ATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDL 492 ++D Y+ V G Q+ +T V+ NP W D++ + P+R++V+D D + DD Sbjct: 26 SSDPYVIVRMGKQKLKTRVIKKTTNPEWNDELTLS--IEDPAVPVRLEVYDKD-TFIDDA 82 Query: 493 LGSCD 497 +G+ + Sbjct: 83 MGNAE 87 >5UE8-A nrPDB Length = 961 Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 429 DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDAD 485 D T ++D Y+ V G + RT ++ N NP W + FE ++ ++V+VWD D Sbjct: 177 DKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFE--CHNSSDRIKVRVWDED 231 >5A52-A nrPDB Length = 168 Score = 38.1 bits (87), Expect = 0.010, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Query: 432 TATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDD 491 +++D Y+ V G Q+ +T VV ++ NP W D + + P+++ V+D D DD Sbjct: 24 SSSDPYIVVHCGKQKLKTRVVKHSVNPEWNDDLTLS--VTDPNLPIKLTVYDYDLLSADD 81 Query: 492 LLGSCD 497 +G + Sbjct: 82 KMGEAE 87 >1UW4-B nrPDB Length = 248 Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust. Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 6/115 (5%) Query: 60 VNTQRFLRPDRTCTLCKNSLMRDATQRLPVAITHWRPHSSHCQRNVAAAKVHSTEGVARE 119 V T++ LR R ++ ++D + I + + +S HC N+ A V E V Sbjct: 19 VTTEKVLRQMRKLP-WQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIH 77 Query: 120 AAANINNDWRVGLDVNPRPEANMR----ASVAGSHSKVANFAAEKTYQDQYNFNS 170 + D R+G++VN +P+ N R A G + ++ Y+F S Sbjct: 78 VVDGVLEDIRLGMEVN-QPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTS 131 >4NPK-A nrPDB Length = 299 Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Query: 425 HLWGDYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLS-TGGPLRVQVWD 483 +L G +D Y + G Q F++ V+ N +P+W + +E ++ G L ++++D Sbjct: 42 YLKGLVKGKSDPYGIIRVGNQIFQSRVIKENLSPKWNEV--YEALVYEHPGQELEIELFD 99 Query: 484 ADYGWDDDLLGSC 496 D DD LGS Sbjct: 100 EDPD-KDDFLGSL 111 >5A50-A nrPDB Length = 177 Score = 31.6 bits (70), Expect = 0.95, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 432 TATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDD 491 +++D Y+ V G Q+ +T V+ + NP W + + + + + + V+D D DD Sbjct: 36 SSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTLS--VTDSNLTVLLTVYDHDMFSKDD 93 Query: 492 LLGSCD 497 +G + Sbjct: 94 KMGDAE 99 >4P42-A nrPDB Length = 474 Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Query: 425 HLWGDYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLS-TGGPLRVQVWD 483 +L G +D Y + G Q F++ V+ N +P+W + +E ++ G L ++++D Sbjct: 215 YLKGLVKGKSDPYGIIRVGNQIFQSRVIKENLSPKWNEV--YEALVYEHPGQELEIELFD 272 Query: 484 ADYGWDDDLLGSC 496 D DD LGS Sbjct: 273 EDPD-KDDFLGSL 284 >1YI7-A nrPDB Length = 542 Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 24/51 (47%) Query: 132 LDVNPRPEANMRASVAGSHSKVANFAAEKTYQDQYNFNSDTVECRMYSFRL 182 +D PR + SV K+ EKTY ++ NF+SD + S R+ Sbjct: 298 VDNWPRVVGGKQGSVNVEAPKIPEVKWEKTYDEKDNFDSDKLNINFQSLRI 348 >1HKT-A nrPDB Length = 106 Score = 29.3 bits (64), Expect = 4.1, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%) Query: 192 FKKALRALPRNFNSSTEHAYHRLISSYGTHFITAVDLGG 230 F K L LP N+ + ++ R ++ YG H IT++D GG Sbjct: 41 FAKEL--LPLNYKHNNMASFIRQLNMYGFHKITSIDNGG 77 >4DNL-A nrPDB Length = 140 Score = 29.3 bits (64), Expect = 4.9, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 7/67 (10%) Query: 448 RTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCD-------RSP 500 +T + + NP+W + F+ L V++WD D +D +GS + P Sbjct: 58 KTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP 117 Query: 501 HSGFHEV 507 SG++++ Sbjct: 118 ASGWYKL 124 >3PFQ-A nrPDB Length = 674 Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust. Identities = 13/48 (27%), Positives = 23/48 (47%) Query: 448 RTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGS 495 +T + ++ NP W + F+ L V++WD D +D +GS Sbjct: 212 KTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGS 259 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3NSJ-A nrPDB 937 0.0 3OJY-A nrPDB 288 5e-78 6CXO-A nrPDB 279 2e-75 2RD7-A nrPDB 263 2e-70 4A5W-B nrPDB 242 2e-64 6H03-G nrPDB 228 5e-60 2QQH-A nrPDB 226 2e-59 6H03-D nrPDB 209 2e-54 3OJY-B nrPDB 200 1e-51 Sequences not found previously or not previously below threshold: 5UE8-A nrPDB 40 0.002 6NYT-A nrPDB 40 0.002 4RJ9-A nrPDB 40 0.003 5A52-A nrPDB 39 0.007 3QR1-A nrPDB 33 0.35 3X0V-A nrPDB 33 0.36 5A50-A nrPDB 32 0.77 1HKT-A nrPDB 32 0.80 4P42-A nrPDB 30 2.3 4NPK-A nrPDB 30 2.3 4DNL-A nrPDB 30 2.8 3QR0-A nrPDB 29 6.9 5OYI-3 nrPDB 29 7.4 4IV1-C nrPDB 29 8.8 CONVERGED! >3NSJ-A nrPDB Length = 540 Score = 937 bits (2423), Expect = 0.0, Method: Composition-based stats. Identities = 533/534 (99%), Positives = 533/534 (99%) Query: 21 PCYTATRSECKQKHKFVPGVWMAGEGMDVTTLRRSGSFPVNTQRFLRPDRTCTLCKNSLM 80 PCYTATRSECKQKHKFVPGVWMAGEGMDVTTLRRSGSFPVNTQRFLRPDRTCTLCKNSLM Sbjct: 1 PCYTATRSECKQKHKFVPGVWMAGEGMDVTTLRRSGSFPVNTQRFLRPDRTCTLCKNSLM 60 Query: 81 RDATQRLPVAITHWRPHSSHCQRNVAAAKVHSTEGVAREAAANINNDWRVGLDVNPRPEA 140 RDATQRLPVAITHWRPHSSHCQRNVAAAKVHSTEGVAREAAANINNDWRVGLDVNPRPEA Sbjct: 61 RDATQRLPVAITHWRPHSSHCQRNVAAAKVHSTEGVAREAAANINNDWRVGLDVNPRPEA 120 Query: 141 NMRASVAGSHSKVANFAAEKTYQDQYNFNSDTVECRMYSFRLVQKPPLHLDFKKALRALP 200 NMRASVAGSHSKVANFAAEKTYQDQYNFNSDTVECRMYSFRLVQKPPLHLDFKKALRALP Sbjct: 121 NMRASVAGSHSKVANFAAEKTYQDQYNFNSDTVECRMYSFRLVQKPPLHLDFKKALRALP 180 Query: 201 RNFNSSTEHAYHRLISSYGTHFITAVDLGGRISVLTALRTCQLTLNGLTADEVGDCLNVE 260 RNFNSSTEHAYH LISSYGTHFITAVDLGGRISVLTALRTCQLTLNGLTADEVGDCLNVE Sbjct: 181 RNFNSSTEHAYHELISSYGTHFITAVDLGGRISVLTALRTCQLTLNGLTADEVGDCLNVE 240 Query: 261 AQVSIGAQASVSSEYKACEEKKKQHKMATSFHQTYRERHVEVLGGPLDSTHDLLFGNQAT 320 AQVSIGAQASVSSEYKACEEKKKQHKMATSFHQTYRERHVEVLGGPLDSTHDLLFGNQAT Sbjct: 241 AQVSIGAQASVSSEYKACEEKKKQHKMATSFHQTYRERHVEVLGGPLDSTHDLLFGNQAT 300 Query: 321 PEQFSTWTASLPSNPGLVDYSLEPLHTLLEEQNPKREALRQAISHYIMSRARWQNCSRPC 380 PEQFSTWTASLPSNPGLVDYSLEPLHTLLEEQNPKREALRQAISHYIMSRARWQNCSRPC Sbjct: 301 PEQFSTWTASLPSNPGLVDYSLEPLHTLLEEQNPKREALRQAISHYIMSRARWQNCSRPC 360 Query: 381 RSGQHKSSHDSCQCECQDSKVTNQDCCPRQRGLAHLVVSNFRAEHLWGDYTTATDAYLKV 440 RSGQHKSSHDSCQCECQDSKVTNQDCCPRQRGLAHLVVSNFRAEHLWGDYTTATDAYLKV Sbjct: 361 RSGQHKSSHDSCQCECQDSKVTNQDCCPRQRGLAHLVVSNFRAEHLWGDYTTATDAYLKV 420 Query: 441 FFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRSP 500 FFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRSP Sbjct: 421 FFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRSP 480 Query: 501 HSGFHEVTCELNHGRVKFSYHAKCLPHLTGGTCLEYAPQGLLGDPPGNRSGAVW 554 HSGFHEVTCELNHGRVKFSYHAKCLPHLTGGTCLEYAPQGLLGDPPGNRSGAVW Sbjct: 481 HSGFHEVTCELNHGRVKFSYHAKCLPHLTGGTCLEYAPQGLLGDPPGNRSGAVW 534 >3OJY-A nrPDB Length = 554 Score = 288 bits (737), Expect = 5e-78, Method: Composition-based stats. Identities = 66/287 (22%), Positives = 129/287 (44%), Gaps = 31/287 (10%) Query: 129 RVGLDVNPRPEAN-MRASVAGSHSKVANFAAE--KTYQDQYNFNSDTVECRMYSFRLVQK 185 G+ + P + + V SHS+ +F E K + ++ F + + F++ +K Sbjct: 217 SFGVTIGIGPAGSPLLVGVGVSHSQDTSFLNELNKYNEKKFIFTRIFTKVQTAHFKM-RK 275 Query: 186 PPLHLD--FKKALRALPRNFNSSTEHAYHRLISSYGTHFITAVDLGGRISVLTALRTCQL 243 + LD ++L LP +N Y + I+ YGTH+IT+ +GG + + ++ Sbjct: 276 DDIMLDEGMLQSLMELPDQYNYGM---YAKFINDYGTHYITSGSMGGIYEYILVIDKAKM 332 Query: 244 TLNGLTADEVGDC------LNVEAQVSIGAQASVSSEYKACEEKKKQHKMATSFHQTYRE 297 G+T+ ++ C + E ++++G S K K ++ + A + E Sbjct: 333 ESLGITSRDITTCFGGSLGIQYEDKINVGGGLSGDHCKKFGGGKTERARKAMAV-----E 387 Query: 298 RHVEVLGGPLDSTHDLLFGNQATPEQFSTWTASLPSNPGLVDYSLEPLHTLLEEQN---- 353 + + G L N++T + +W SL NP ++D+ ++P+H +L + Sbjct: 388 DIISRVRGGSSGWSGGLAQNRSTI-TYRSWGRSLKYNPVVIDFEMQPIHEVLRHTSLGPL 446 Query: 354 -PKREALRQAISHYIMSRARWQNC-SRPC-RSGQHKSSHDSCQCECQ 397 KR+ LR+A+ Y+M + C PC +G SC+C+C+ Sbjct: 447 EAKRQNLRRALDQYLM---EFNACRCGPCFNNGVPILEGTSCRCQCR 490 >6CXO-A nrPDB Length = 529 Score = 279 bits (713), Expect = 2e-75, Method: Composition-based stats. Identities = 66/318 (20%), Positives = 127/318 (39%), Gaps = 40/318 (12%) Query: 114 EGVAREAAANINNDWRVGLDVNPRPEANM-RASVAGSHSKVANFAAE--------KTYQD 164 + + RE +N N D+ + PE S A SK + +A+ K ++ Sbjct: 202 KAINREKTSNFNADFALKFSATEVPEKGAGEVSPAEHSSKPTDISAKFKFSYFMGKNFRR 261 Query: 165 QYNFNSDTVECRMYSFRLVQ---------KPPLHLDFKKALRALPRNFNSSTEHAYHRLI 215 ++ S + + ++ +VQ L F ++ALP ++ Y + Sbjct: 262 LSSYFSQSKKMFVHLRGVVQLGRFVMRNRDVVLRSTFLDDVKALPTSYEKG---EYFGFL 318 Query: 216 SSYGTHFITAVDLGGRISVLTALRTCQLTLNGLTADEVGDCLNVEAQVSIGAQ-----AS 270 +YGTH+ T+ LGG+ ++ L + G+ ++V CL + I Q AS Sbjct: 319 ETYGTHYSTSGSLGGQYEIVYVLDKASMKEKGVDLNDVKHCLGFNMDLRIPLQDDLKDAS 378 Query: 271 VSSEYK--ACEEKKKQHKMATSFHQTYRERHVEVLGGPLDST----HDLLFGNQATPE-Q 323 V++ C + + + + + GG + +L G++ + Sbjct: 379 VTASVNADGCIKTDNGKTVDITRDNIIDDVISFIRGGTREQAILLKEKILRGDKTFDKTD 438 Query: 324 FSTWTASLPSNPGLVDYSLEPLHTL----LEEQNPKREALRQAISHYIMSRARWQNCSRP 379 F+ W +SL + P L+ + P++ L +++ K++ L +A+ YI + C P Sbjct: 439 FANWASSLANAPALISQRMSPIYNLIPLKIKDAYIKKQNLEKAVEDYI-DEFSTKRCY-P 496 Query: 380 CRSGQHKSSHDS-CQCEC 396 C +G D C C C Sbjct: 497 CLNGGTIILLDGQCLCSC 514 >2RD7-A nrPDB Length = 367 Score = 263 bits (671), Expect = 2e-70, Method: Composition-based stats. Identities = 58/256 (22%), Positives = 116/256 (45%), Gaps = 26/256 (10%) Query: 129 RVGLDVNPRPEAN-MRASVAGSHSKVANFAAE--KTYQDQYNFNSDTVECRMYSFRLVQK 185 G+ + P + + V SHS+ +F E K + ++ F + + F++ +K Sbjct: 122 SFGVTIGIGPAGSPLLVGVGVSHSQDTSFLNELNKYNEKKFIFTRIFTKVQTAHFKM-RK 180 Query: 186 PPLHLD--FKKALRALPRNFNSSTEHAYHRLISSYGTHFITAVDLGGRISVLTALRTCQL 243 + LD ++L LP +N Y + I+ YGTH+IT+ +GG + + ++ Sbjct: 181 DDIMLDEGMLQSLMELPDQYNYGM---YAKFINDYGTHYITSGSMGGIYEYILVIDKAKM 237 Query: 244 TLNGLTADEVGDC------LNVEAQVSIGAQASVSSEYKACEEKKKQHKMATSFHQTYRE 297 G+T+ ++ C + E ++++G S K K ++ + A + E Sbjct: 238 ESLGITSRDITTCFGGSLGIQYEDKINVGGGLSGDHCKKFGGGKTERARKAMAV-----E 292 Query: 298 RHVEVLGGPLDSTHDLLFGNQATPEQFSTWTASLPSNPGLVDYSLEPLHTLLEEQN---- 353 + + G L N++T + +W SL NP ++D+ ++P+H +L + Sbjct: 293 DIISRVRGGSSGWSGGLAQNRSTI-TYRSWGRSLKYNPVVIDFEMQPIHEVLRHTSLGPL 351 Query: 354 -PKREALRQAISHYIM 368 KR+ LR+A+ Y+M Sbjct: 352 EAKRQNLRRALDQYLM 367 >4A5W-B nrPDB Length = 913 Score = 242 bits (618), Expect = 2e-64, Method: Composition-based stats. Identities = 74/293 (25%), Positives = 120/293 (40%), Gaps = 32/293 (10%) Query: 128 WRVGLDVNPRPEANMRASVAGSHSKVANFAAEKTYQDQYNFNSDTVECRMYSFRLVQKPP 187 + N + + ++ SH K ++F NF + Sbjct: 264 YSSKRSENINHNSAFKQAIQASHKKDSSFIRIHKVMKVLNFTTKAK-------------D 310 Query: 188 LHLD--FKKALRALPRNFNSSTEHAYHRLISSYGTHFITAVDLGGRISVLTALRTCQLTL 245 LHL F KAL LP +NS+ Y R+ +GTH+ T+ LGG +L + +L Sbjct: 311 LHLSDVFLKALNHLPLEYNSAL---YSRIFDDFGTHYFTSGSLGGVYDLLYQFSSEELKN 367 Query: 246 NGLTADEVGDCLNVEAQVSIGAQASVSSEYKACEEKKKQHKMATSFHQTYRERHVEVLGG 305 +GLT +E C+ +E + + E++ C K K SF Q + + GG Sbjct: 368 SGLTEEEAKHCVRIETKKRVLFAKKTKVEHR-CTTNKLSEKHEGSFIQGAEKSISLIRGG 426 Query: 306 PLDSTHDLLFGNQAT---PEQFSTWTASLPSNPGLVDYSLEPLHTLLEE---QNPKREAL 359 + L + ++ + FS W S+ NP ++D+ L P+ L+ KR L Sbjct: 427 RSEYGAALAWEKGSSGLEEKTFSEWLESVKENPAVIDFELAPIVDLVRNIPCAVTKRNNL 486 Query: 360 RQAISHYIMSRARWQNC-SRPC-RSGQHKSSHDSCQCECQDSKVTNQDCCPRQ 410 R+A+ Y A++ C PC +G+ S C C CQ T + C +Q Sbjct: 487 RKALQEY---AAKFDPCQCAPCPNNGRPTLSGTECLCVCQSG--TYGENCEKQ 534 >6H03-G nrPDB Length = 538 Score = 228 bits (581), Expect = 5e-60, Method: Composition-based stats. Identities = 61/316 (19%), Positives = 123/316 (38%), Gaps = 33/316 (10%) Query: 109 KVHSTEGVAREAAANINNDWRVGLDVNPR-------PEANMRASVAGSHSKVANFAAEKT 161 ++ + + + +E +N N + E S+ G S +++ +T Sbjct: 199 QIEAFKSIIQEKTSNFNAAISLKFTPTETNKAEQCCEETASSISLHGKGSFRFSYSKNET 258 Query: 162 YQDQYNFNSDTVECRMYSFRLV---------QKPPLHLDFKKALRALPRNFNSSTEHAYH 212 YQ +++S + ++ + + L F ++ALP + Y Sbjct: 259 YQLFLSYSSKKEKMFLHVKGEIHLGRFVMRNRDVVLTTTFVDDIKALPTTYEKG---EYF 315 Query: 213 RLISSYGTHFITAVDLGGRISVLTALRTCQLTLNGLTADEVGDCLNVEAQVSIGA-QASV 271 + +YGTH+ ++ LGG ++ L + G+ ++ CL VS+ + SV Sbjct: 316 AFLETYGTHYSSSGSLGGLYELIYVLDKASMKRKGVELKDIKRCLGYHLDVSLAFSEISV 375 Query: 272 SSEYKACEEKKKQHKMATSF-HQTYRERHVEVLGGP-----LDSTHDLLFGNQATPEQFS 325 +E+ + K+ A + + + V ++ G + LL G F Sbjct: 376 GAEFNKDDCVKRGEGRAVNITSENLIDDVVSLIRGGTRKYAFELKEKLLRGTVIDVTDFV 435 Query: 326 TWTASLPSNPGLVDYSLEPLHTLL----EEQNPKREALRQAISHYIMSRARWQNCSRPCR 381 W +S+ P L+ L P++ L+ + + K++ L +AI YI + + C C+ Sbjct: 436 NWASSINDAPVLISQKLSPIYNLVPVKMKNAHLKKQNLERAIEDYI-NEFSVRKCHT-CQ 493 Query: 382 SGQHKSSHDS-CQCEC 396 +G D C C C Sbjct: 494 NGGTVILMDGKCLCAC 509 >2QQH-A nrPDB Length = 334 Score = 226 bits (575), Expect = 2e-59, Method: Composition-based stats. Identities = 53/253 (20%), Positives = 100/253 (39%), Gaps = 45/253 (17%) Query: 129 RVGLDVNPRPEAN-MRASVAGSHSKVANFAAE--KTYQDQYNFNSDTVECRMYSFRLVQK 185 G+ + P + + V SHS+ +F E K + ++ F + + F++ +K Sbjct: 117 SFGVTIGIGPAGSPLLVGVGVSHSQDTSFLNELNKYNEKKFIFTRIFTKVQTAHFKM-RK 175 Query: 186 PPLHLD--FKKALRALPRNFNSSTEHAYHRLISSYGTHFITAVDLGGRISVLTALRTCQL 243 + LD ++L LP +N Y + I+ YGTH+IT+ +GG + + ++ Sbjct: 176 DDIMLDEGMLQSLMELPDQYNYGM---YAKFINDYGTHYITSGSMGGIYEYILVIDKAKM 232 Query: 244 TLNGLTADEVGDCLNVEAQVSIGAQASVSSEYKACEEKKKQHKMATSFHQTYRERHVEVL 303 G + MA E + + Sbjct: 233 ESLGX-----------------------XXXXXXXXXXXARKAMAV-------EDIISRV 262 Query: 304 GGPLDSTHDLLFGNQATPEQFSTWTASLPSNPGLVDYSLEPLHTLLEEQN-----PKREA 358 G L N++T + +W SL NP ++D+ ++P+H +L + KR+ Sbjct: 263 RGGSSGWSGGLAQNRSTI-TYRSWGRSLKYNPVVIDFEMQPIHEVLRHTSLGPLEAKRQN 321 Query: 359 LRQAISHYIMSRA 371 LR+A+ Y+M+ A Sbjct: 322 LRRALDQYLMAAA 334 >6H03-D nrPDB Length = 821 Score = 209 bits (532), Expect = 2e-54, Method: Composition-based stats. Identities = 61/255 (23%), Positives = 96/255 (37%), Gaps = 23/255 (9%) Query: 154 ANFAAEKTYQDQYNFNSDTVECRMYSFRLVQKPPLHLD--FKKALRALPRNFNSSTEHAY 211 + E Y + F L L F K L LP ++ S AY Sbjct: 214 TSHTNEIHKGKSYQLLVVENTVEVAQFINNNPEFLQLAEPFWKELSHLPSLYDYS---AY 270 Query: 212 HRLISSYGTHFITAVDLGGRISVLTALRTCQLTLNGLTADEVGDCLNVEAQVSIGAQASV 271 RLI YGTH++ + LGG VL + + +L N + E C S G V Sbjct: 271 RRLIDQYGTHYLQSGSLGGEYRVLFYVDSEKLKQNDFNSVEEKKC------KSSGWHFVV 324 Query: 272 SSEYKACEEKKKQHKMATSFHQTYRERHVEVLGGPLDSTHDLLFGNQATP----EQFSTW 327 C+E + K A+ + GG L + P ++S W Sbjct: 325 KFSSHGCKELENALKAASGTQNNVLRGEPFIRGGGAGFISGLSYLELDNPAGNKRRYSAW 384 Query: 328 TASLPSNPGLVDYSLEPLHTLLEE---QNPKREALRQAISHYIMSRARWQNC-SRPCRSG 383 S+ + P ++ L PL+ L++E + K+ L+ A+ Y+ + C RPC++G Sbjct: 385 AESVTNLPQVIKQKLTPLYELVKEVPCASVKKLYLKWALEEYL---DEFDPCHCRPCQNG 441 Query: 384 QHKS-SHDSCQCECQ 397 + C C C+ Sbjct: 442 GLATVEGTHCLCHCK 456 >3OJY-B nrPDB Length = 537 Score = 200 bits (508), Expect = 1e-51, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 104/289 (35%), Gaps = 39/289 (13%) Query: 131 GLDVNPRPEANMRASVAGSHSKVANFAA--EKTYQDQYNFNSDTVECRMYSFRL-VQKPP 187 G + ++ + ++ ++ + F + + ++L + Sbjct: 199 GFSFGFKIPGIFELGISSQSDRGKHYIRRTKRFSHTKSVFLHARSDLEVAHYKLKPRSLM 258 Query: 188 LHLDFKKALRALPRNFNSSTEHAYHRLISSYGTHFITAVDLGGRISVLTALRTCQLTLNG 247 LH +F + ++ LP ++ Y L +GTH+IT LGG + + Sbjct: 259 LHYEFLQRVKRLPLEYSYG---EYRDLFRDFGTHYITEAVLGGIYEYTLVMNKEAMERGD 315 Query: 248 LTADEVGDC-------------LNVEAQVSIGAQASVSSEYKACEEKKKQHKMATSFHQT 294 T + V C + V VS+G + +E K ++ K+ M Sbjct: 316 YTLNNVHACAKNDFKIGGAIEEVYVSLGVSVGKCRGILNEIK---DRNKRDTMVEDL--- 369 Query: 295 YRERHVEVLGGPLDSTHDLLFGNQATPEQFSTWTASLPSNPGLVDYSLEPLHTLLEEQ-- 352 V V GG + L + T + W ++ NP ++ +EPL+ L+ Sbjct: 370 ----VVLVRGGASEHITTLAYQELPTADLMQEWGDAVQYNPAIIKVKVEPLYELVTATDF 425 Query: 353 ---NPKREALRQAISHYIMSRARWQNC-SRPCR-SGQHKSSHDSCQCEC 396 + R+ ++QA+ + + +C PC+ +G C C C Sbjct: 426 AYSSTVRQNMKQALEEF---QKEVSSCHCAPCQGNGVPVLKGSRCDCIC 471 >5UE8-A nrPDB Length = 961 Score = 40.5 bits (93), Expect = 0.002, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 429 DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDAD 485 D T ++D Y+ V G + RT ++ N NP W + FE ++ ++V+VWD D Sbjct: 177 DKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFE--CHNSSDRIKVRVWDED 231 >6NYT-A nrPDB Length = 148 Score = 40.1 bits (92), Expect = 0.002, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%) Query: 429 DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDAD 485 D T ++D Y+ V G + RT ++ N NP W + FE ++ ++V+VWD D Sbjct: 33 DKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFE--CHNSSDRIKVRVWDED 87 >4RJ9-A nrPDB Length = 165 Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 3/65 (4%) Query: 433 ATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDL 492 ++D Y+ V G Q+ +T V+ NP W D++ + P+R++V+D D + DD Sbjct: 26 SSDPYVIVRMGKQKLKTRVIKKTTNPEWNDELTLS--IEDPAVPVRLEVYDKD-TFIDDA 82 Query: 493 LGSCD 497 +G+ + Sbjct: 83 MGNAE 87 >5A52-A nrPDB Length = 168 Score = 38.5 bits (88), Expect = 0.007, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%) Query: 432 TATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDD 491 +++D Y+ V G Q+ +T VV ++ NP W D + + P+++ V+D D DD Sbjct: 24 SSSDPYIVVHCGKQKLKTRVVKHSVNPEWNDDLTLS--VTDPNLPIKLTVYDYDLLSADD 81 Query: 492 LLGSCD 497 +G + Sbjct: 82 KMGEAE 87 >3QR1-A nrPDB Length = 813 Score = 33.1 bits (74), Expect = 0.35, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 38/121 (31%), Gaps = 4/121 (3%) Query: 230 GRISVLTA-LRTCQLTLNGLTADEVGDCLNVEAQVSIGAQASVSSEYKACEEKKKQHKMA 288 G L L T ++ N + + CL+ + ++ + A Sbjct: 153 GEWEKLYFRLTTVEMEKNKIPVKSIQKCLSKDKDDRTRVAKAIEKIGWPSGKNDAIEIKA 212 Query: 289 TSFHQTYRERHVEVLGGPLDSTHDLLFGNQATPEQ--FSTWTASLPSNPGLVDYSLEPLH 346 F ++ + ++ L N+ F + + +P L +L PL+ Sbjct: 213 FDFDTFFKFYLSLLERSEIEGIFKELSQNKGNITTVMFRDFLNDMQRHPSLHK-TLFPLY 271 Query: 347 T 347 T Sbjct: 272 T 272 >3X0V-A nrPDB Length = 541 Score = 32.8 bits (73), Expect = 0.36, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 45/127 (35%), Gaps = 21/127 (16%) Query: 349 LEEQNPKREALRQAISHYIMSRARWQNCSRP---CRSGQHKSSHDSCQCECQDSKVTNQD 405 +E QN QA S ++ + N ++P C G D+ Sbjct: 192 METQNTGTNLFDQAFSESVIDSFDFDNPTKPEWYCIEGGTSLLVDA-------------- 237 Query: 406 CCPRQRGLAHLVVSNFRAEHLWGDYTTATDAYLKVFFGGQEFRT-GVVWNNNNPRWTDKM 464 + L H V +N R E + D D + V GG+++ V+N D+M Sbjct: 238 ---MKETLVHKVQNNKRVEAISIDLDAPDDGNMSVKIGGKDYSGYSTVFNTTALGCLDRM 294 Query: 465 DFENVLL 471 D + L Sbjct: 295 DLRGLNL 301 >5A50-A nrPDB Length = 177 Score = 32.0 bits (71), Expect = 0.77, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 432 TATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDD 491 +++D Y+ V G Q+ +T V+ + NP W + + + + + + V+D D DD Sbjct: 36 SSSDPYVVVKMGKQKLKTRVINKDVNPEWNEDLTLS--VTDSNLTVLLTVYDHDMFSKDD 93 Query: 492 LLGSCD 497 +G + Sbjct: 94 KMGDAE 99 >1HKT-A nrPDB Length = 106 Score = 32.0 bits (71), Expect = 0.80, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Query: 192 FKKALRALPRNFNSSTEHAYHRLISSYGTHFITAVDLGGR 231 F K L LP N+ + ++ R ++ YG H IT++D GG Sbjct: 41 FAKEL--LPLNYKHNNMASFIRQLNMYGFHKITSIDNGGL 78 >4P42-A nrPDB Length = 474 Score = 30.5 bits (67), Expect = 2.3, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Query: 425 HLWGDYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDA 484 +L G +D Y + G Q F++ V+ N +P+W + + V G L ++++D Sbjct: 215 YLKGLVKGKSDPYGIIRVGNQIFQSRVIKENLSPKWNEVYE-ALVYEHPGQELEIELFDE 273 Query: 485 DYGWDDDLLGS 495 D DD LGS Sbjct: 274 DPD-KDDFLGS 283 >4NPK-A nrPDB Length = 299 Score = 30.5 bits (67), Expect = 2.3, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Query: 425 HLWGDYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDA 484 +L G +D Y + G Q F++ V+ N +P+W + + V G L ++++D Sbjct: 42 YLKGLVKGKSDPYGIIRVGNQIFQSRVIKENLSPKWNEVYE-ALVYEHPGQELEIELFDE 100 Query: 485 DYGWDDDLLGS 495 D DD LGS Sbjct: 101 DPD-KDDFLGS 110 >4DNL-A nrPDB Length = 140 Score = 30.1 bits (66), Expect = 2.8, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 7/67 (10%) Query: 448 RTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDLLGSCD-------RSP 500 +T + + NP+W + F+ L V++WD D +D +GS + P Sbjct: 58 KTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP 117 Query: 501 HSGFHEV 507 SG++++ Sbjct: 118 ASGWYKL 124 >3QR0-A nrPDB Length = 816 Score = 28.5 bits (62), Expect = 6.9, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 38/121 (31%), Gaps = 4/121 (3%) Query: 230 GRISVLTA-LRTCQLTLNGLTADEVGDCLNVEAQVSIGAQASVSSEYKACEEKKKQHKMA 288 G L L T ++ N + + CL+ + ++ + A Sbjct: 153 GEWEKLYFRLTTVEMEKNKIPVKAIQKCLSKDKDDRARISKALEKIGWPSGKNDAIDLKA 212 Query: 289 TSFHQTYRERHVEVLGGPLDSTHDLLFGNQATPEQ--FSTWTASLPSNPGLVDYSLEPLH 346 F ++ + ++ L N+ F + + +P L +L PL+ Sbjct: 213 FDFDTFFKFYLALLERSEIEGIFKELSKNKGNITTVMFRDFLNDMQRHPSLHK-TLFPLY 271 Query: 347 T 347 T Sbjct: 272 T 272 >5OYI-3 nrPDB Length = 221 Score = 28.5 bits (62), Expect = 7.4, Method: Composition-based stats. Identities = 14/102 (13%), Positives = 30/102 (29%), Gaps = 2/102 (1%) Query: 195 ALRALPRNFNSSTEHAYHRLISSYGTHFITAVDLGGRISVLTALRTCQLTLNGLTADEVG 254 A + + + S Y + + HF+ + + A + T +E Sbjct: 82 AAKHMSNTYLSGIAQYYTQYSGTINLHFMFTGSTDSKARYMVAYIPPGVETPPDTPEEAA 141 Query: 255 DCLNVE--AQVSIGAQASVSSEYKACEEKKKQHKMATSFHQT 294 C++ E ++ S+ A T+ Q Sbjct: 142 HCIHAEWDTGLNSKFTFSIPYVSAADYAYTASDTAETTNVQG 183 >4IV1-C nrPDB Length = 221 Score = 28.5 bits (62), Expect = 8.8, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 4/100 (4%) Query: 176 RMYSFRLVQKPPLHLDFKKALRALPRNFNSSTEHAYHRLISSYGTHFITAVDLGGRISVL 235 R RL+ K + L A + + + S Y + + HF+ + + Sbjct: 67 RTDEQRLLAKFDVSL----AAKHMSNTYLSGIAQYYAQYSGTINLHFMFTGSTDSKARYM 122 Query: 236 TALRTCQLTLNGLTADEVGDCLNVEAQVSIGAQASVSSEY 275 A + T ++ C++ E + ++ + S Y Sbjct: 123 VAYVPPGVETPPDTPEKAAHCIHAEWDTGLNSKFTFSIPY 162 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.315 0.131 0.402 Lambda K H 0.267 0.0399 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,033,284 Number of Sequences: 36641 Number of extensions: 979193 Number of successful extensions: 2241 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 30 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 2147 Number of HSP's gapped (non-prelim): 52 length of query: 554 length of database: 10,336,785 effective HSP length: 102 effective length of query: 452 effective length of database: 6,599,403 effective search space: 2982930156 effective search space used: 2982930156 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 62 (28.5 bits)