BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= P10768
(282 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
3FCX-A nrPDB 590 e-169
3I6Y-A nrPDB 327 2e-90
4B6G-A nrPDB 308 1e-84
3LS2-A nrPDB 304 2e-83
3E4D-A nrPDB 292 1e-79
1PV1-A nrPDB 200 7e-52
1F0N-A nrPDB 41 6e-04
3FCY-A nrPDB 40 0.001
4MQM-A nrPDB 40 0.001
3WLA-A nrPDB 40 0.002
3WYD-A nrPDB 37 0.007
6FKX-A nrPDB 36 0.018
4WJL-A nrPDB 36 0.021
4EB0-A nrPDB 35 0.025
5OLJ-A nrPDB 35 0.034
1RP1-A nrPDB 33 0.12
1Z68-A nrPDB 33 0.17
6GI5-A nrPDB 32 0.36
1W52-X nrPDB 31 0.52
2VHS-A nrPDB 31 0.55
3JWE-A nrPDB 30 0.88
3IL7-A nrPDB 30 1.0
5OQM-4 nrPDB 30 1.0
6GYM-4 nrPDB 30 1.1
1R88-A nrPDB 30 1.1
4TGL-A nrPDB 30 1.2
1HPL-A nrPDB 30 1.2
5YP1-A nrPDB 30 1.2
4V2I-A nrPDB 30 1.2
6QPR-A nrPDB 30 1.4
3KVN-X nrPDB 30 1.6
2OEL-A nrPDB 29 1.8
5THM-A nrPDB 29 2.4
1LPA-B nrPDB 29 2.8
3HWN-A nrPDB 28 3.0
1ETH-A nrPDB 28 3.1
2Y6V-A nrPDB 28 3.5
3OF9-A nrPDB 28 3.5
1ICF-A nrPDB 28 3.6
1CJL-A nrPDB 28 3.7
2PPL-A nrPDB 28 4.3
1K4Y-A nrPDB 28 5.9
1GPL-A nrPDB 27 6.6
6EOR-A nrPDB 27 6.9
2ECF-A nrPDB 27 6.9
1LLQ-A nrPDB 27 7.0
5I4H-A nrPDB 27 7.7
5FV4-A nrPDB 27 7.7
>3FCX-A nrPDB
Length = 282
Score = 590 bits (1520), Expect = e-169, Method: Compositional matrix adjust.
Identities = 281/282 (99%), Positives = 281/282 (99%)
Query: 1 MALKQISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQN 60
MALKQISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQN
Sbjct: 1 MALKQISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQN 60
Query: 61 FISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRM 120
FISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRM
Sbjct: 61 FISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRM 120
Query: 121 YSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVL 180
YSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVL
Sbjct: 121 YSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVL 180
Query: 181 CPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFI 240
CPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFI
Sbjct: 181 CPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFI 240
Query: 241 AACTEKKIPVVFRLQEGYDHSYYFIATFITDHIRHHAKYLNA 282
AACTEKKIPVVFRLQE YDHSYYFIATFITDHIRHHAKYLNA
Sbjct: 241 AACTEKKIPVVFRLQEDYDHSYYFIATFITDHIRHHAKYLNA 282
>3I6Y-A nrPDB
Length = 280
Score = 327 bits (839), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 155/283 (54%), Positives = 205/283 (72%), Gaps = 5/283 (1%)
Query: 1 MALKQISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPKAETG-KCPALYWLSGLTCTEQ 59
M+++ +SSNK FGG K + H S LNC M+FA+YLPP+A TG K P LYWLSGLTC+++
Sbjct: 2 MSIENLSSNKSFGGWHKQYSHVSNTLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDE 61
Query: 60 NFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYR 119
NF+ K+G + A+E G+ ++APDTSPRG + +DE +D G GAGFYV+AT+ PW +Y+
Sbjct: 62 NFMQKAGAQRLAAELGIAIVAPDTSPRGEGV-ADDEGYDLGQGAGFYVNATQAPWNRHYQ 120
Query: 120 MYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPV 179
MY YV ELP+LI + FPV +R +I GHSMGGHGAL AL+NP +Y+SVSAF+PI NPV
Sbjct: 121 MYDYVVNELPELIESMFPVSDKR-AIAGHSMGGHGALTIALRNPERYQSVSAFSPINNPV 179
Query: 180 LCPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNF 239
CPWG+KAF+ YLG D W+ YDA+ L+++ + L+DQG+ D FL + QL P+
Sbjct: 180 NCPWGQKAFTAYLGKDTDTWREYDASLLMRA-AKQYVPALVDQGEADNFLAE-QLKPEVL 237
Query: 240 IAACTEKKIPVVFRLQEGYDHSYYFIATFITDHIRHHAKYLNA 282
AA + P+ R EGYDHSYYFIA+FI DH+R H+ YLNA
Sbjct: 238 EAAASSNNYPLELRSHEGYDHSYYFIASFIEDHLRFHSNYLNA 280
>4B6G-A nrPDB
Length = 283
Score = 308 bits (790), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 147/279 (52%), Positives = 197/279 (70%), Gaps = 4/279 (1%)
Query: 2 ALKQISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQNF 61
A++ I ++ FGG Q+V+ H + L C+MKFAVYLP E +YWLSGLTCTEQNF
Sbjct: 8 AMELIEQHQIFGGSQQVWAHHAQTLQCEMKFAVYLPNNPENRPLGVIYWLSGLTCTEQNF 67
Query: 62 ISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMY 121
I+KSG+ + A+EH ++V+APDTSPRG + D+++D G AGFY++ATE PW NY+MY
Sbjct: 68 ITKSGFQRYAAEHQVIVVAPDTSPRGEQVPN-DDAYDLGQSAGFYLNATEQPWAANYQMY 126
Query: 122 SYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLC 181
Y+ ELP+LI +FP + +R SI GHSMGGHGAL+ AL+N +Y+SVSAF+PI +P L
Sbjct: 127 DYILNELPRLIEKHFPTNGKR-SIMGHSMGGHGALVLALRNQERYQSVSAFSPILSPSLV 185
Query: 182 PWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIA 241
PWG+KAF+ YLG D+ KW+ YDA L++ Q + IDQG +D+F L QL ++FI
Sbjct: 186 PWGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQ-GMRIDQGLEDEF-LPTQLRTEDFIE 243
Query: 242 ACTEKKIPVVFRLQEGYDHSYYFIATFITDHIRHHAKYL 280
C PV R +GYDHSYYFIA+FI +HI +HA +L
Sbjct: 244 TCRAANQPVDVRFHKGYDHSYYFIASFIGEHIAYHAAFL 282
>3LS2-A nrPDB
Length = 280
Score = 304 bits (779), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 148/282 (52%), Positives = 196/282 (69%), Gaps = 5/282 (1%)
Query: 3 LKQISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPKA-ETGKCPALYWLSGLTCTEQNF 61
L+ ISS K GG K + H +V +C M+FAV+LPP A E+ K P LYWLSGLTCT++NF
Sbjct: 2 LENISSVKVSGGWHKQYTHSAVSTHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDENF 61
Query: 62 ISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMY 121
+ K+G + A+E G+ ++APDTSPRG N+ ED S+DF GAGFYV+AT+ P+ T++ MY
Sbjct: 62 MQKAGAFKKAAELGIAIVAPDTSPRGDNVPNED-SYDFAQGAGFYVNATQAPYNTHFNMY 120
Query: 122 SYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLC 181
YV ELP LI +FPV + +I GHSMGGHGAL+ ALKNP Y S SAF+PI NP+ C
Sbjct: 121 DYVVNELPALIEQHFPVTSTK-AISGHSMGGHGALMIALKNPQDYVSASAFSPIVNPINC 179
Query: 182 PWGKKAFSGYLGTDQSKWKAYDATHLV-KSYPGSQLDILIDQGKDDQFLLDGQLLPDNFI 240
PWG KAF+GYLG D++ W YD+ L+ K+ + L +L+ QG D F LD QL P N +
Sbjct: 180 PWGVKAFTGYLGADKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNF-LDEQLKPQNLV 238
Query: 241 AACTEKKIPVVFRLQEGYDHSYYFIATFITDHIRHHAKYLNA 282
A +K P+ +Q GYDHSY+FI++FI H+ H +YL+A
Sbjct: 239 AVAKQKDYPLTLEMQTGYDHSYFFISSFIDQHLVFHHQYLSA 280
>3E4D-A nrPDB
Length = 278
Score = 292 bits (748), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 147/276 (53%), Positives = 183/276 (66%), Gaps = 4/276 (1%)
Query: 6 ISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQNFISKS 65
IS N FGG+Q VF H S L +M FAVY+PPKA CP +++LSGLTCT N + K
Sbjct: 5 ISQNTAFGGMQGVFSHQSETLKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHANVMEKG 64
Query: 66 GYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVT 125
Y + ASE GLVV+ PDTSPRG ++ E +W G GAGFY+DATE+PW +Y+MYSYVT
Sbjct: 65 EYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVT 124
Query: 126 EELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGK 185
EELP LI +F D R SIFGHSMGGHGA+ ALKNP ++KS SAFAPI P W +
Sbjct: 125 EELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVAPSSADWSE 184
Query: 186 KAFSGYLGTDQSKWKAYDATHLVKSYPGSQL-DILIDQGKDDQFLLDGQLLPDNFIAACT 244
A YLG D++ W+ YDA LV+ G++ + LIDQGK D FL G L P F A
Sbjct: 185 PALEKYLGADRAAWRRYDACSLVED--GARFPEFLIDQGKADSFLEKG-LRPWLFEEAIK 241
Query: 245 EKKIPVVFRLQEGYDHSYYFIATFITDHIRHHAKYL 280
I + R+ + YDHSYYFI+TF+ DH++ HA+ L
Sbjct: 242 GTDIGLTLRMHDRYDHSYYFISTFMDDHLKWHAERL 277
>1PV1-A nrPDB
Length = 299
Score = 200 bits (508), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 115/297 (38%), Positives = 170/297 (57%), Gaps = 20/297 (6%)
Query: 3 LKQISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPK------AETGKCPALYWLSGLTC 56
+K + GG H+S M +YLP + P +++LSGLTC
Sbjct: 1 MKVVKEFSVCGGRLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTC 60
Query: 57 TEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDE-SWDFGTGAGFYVDATEDPWK 115
T N K+ + A ++G ++ PDTSPRG + + E SWDFG GAGFY++AT++P+
Sbjct: 61 TPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYA 120
Query: 116 TNYRMYSYVTEELPQLINANFPVDPQ-------RMSIFGHSMGGHGALICALK--NPGKY 166
+Y+MY Y+ +ELPQ ++++F + ++I GHSMGG+GA+ LK + +Y
Sbjct: 121 QHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRY 180
Query: 167 KSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLD-ILIDQGKD 225
KS SAFAPI NP PWG+KAF GYLG ++++W+AYD L+K+ D ILI G
Sbjct: 181 KSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDS 240
Query: 226 DQFLLDGQLLPDNFIAA--CTEKKIPVVFRLQEGYDHSYYFIATFITDHIRHHAKYL 280
D F L+ L P+ + A T + V + G+DHSYYF++TF+ +H HA+ L
Sbjct: 241 DPF-LEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYFVSTFVPEHAEFHARNL 296
>1F0N-A nrPDB
Length = 285
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 118 YRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICN 177
Y+ +++T ELPQ ++AN V P + G SM G A+I A +P ++ + + + +
Sbjct: 95 YKWETFLTSELPQWLSANRAVKPTGSAAIGLSMAGSSAMILAAYHPQQFIYAGSLSALLD 154
Query: 178 P 178
P
Sbjct: 155 P 155
>3FCY-A nrPDB
Length = 346
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 21/148 (14%)
Query: 33 AVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKG 92
A Y+ PK E GK PAL G + ++ K Y + G V+A D +G
Sbjct: 97 AKYIKPKTE-GKHPALIRFHGYSSNSGDWNDKLNYVAA----GFTVVAMDVRGQGG---- 147
Query: 93 EDESWDFG-----TGAGFYVDATEDPWKTNYRMYSYVTEELPQL--INANFP-VDPQRMS 144
+S D G T G + +D + ++ ++ + QL I N P VD R+
Sbjct: 148 --QSQDVGGVTGNTLNGHIIRGLDD--DADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVG 203
Query: 145 IFGHSMGGHGALICALKNPGKYKSVSAF 172
+ G S GG +L CA P K VS +
Sbjct: 204 VMGPSQGGGLSLACAALEPRVRKVVSEY 231
>4MQM-A nrPDB
Length = 304
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 63/164 (38%), Gaps = 18/164 (10%)
Query: 100 GTGAGFYVDATEDPWKTNYRMYSY-----VTEELPQLINANFPVDPQRMSIFGHSMGGHG 154
G + FY D + P ++N + Y+Y +T E+P + AN V P + G SM G
Sbjct: 73 GGQSSFYTDWYQ-PSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGS 131
Query: 155 ALICALKNPGKYKSVSAFAPICNPVLCPW------------GKKAFSGYLGTDQSKWKAY 202
ALI A P ++ ++ + NP W G A S + + WK
Sbjct: 132 ALILAAYYPQQFPYAASLSGFLNPSEGWWPTLIGLAMNDSGGYNANSMWGPSSDPAWKRN 191
Query: 203 DATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEK 246
D + + I + G L G +P F+ T +
Sbjct: 192 DPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLR 235
>3WLA-A nrPDB
Length = 336
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 18/151 (11%)
Query: 14 GLQKVFEHDSVELNCKMKFAVYLPPKAETGKCPALYWLSG-LTCTEQNF-ISKSGYHQSA 71
GL F D K + V +PPK G P + G + T N + +SG +
Sbjct: 21 GLNTDFPSDG-----KKRAFVVVPPKDSAGGAPVWVPMVGTVEATNWNLNVPRSGNNAKL 75
Query: 72 SEHGLVVIA---------PDTSPRGCNIKGEDESWDFGT-GAGFYVDATEDPWKTNYRMY 121
+EHG +VI+ P+ CN G+D W + G DA+ D +KT+
Sbjct: 76 AEHGYMVISPVRQCAEQDPNLGAGACNGVGKD-GWTWNPWNDGRAPDASGDKYKTDAGDD 134
Query: 122 SYVTEELPQLINANFPVDPQRMSIFGHSMGG 152
E + + + + +D +R+ + G S GG
Sbjct: 135 VRFLEAMVRCVGTKWKLDRKRLFLGGISAGG 165
>3WYD-A nrPDB
Length = 228
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 132 INANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPV 179
+ ++ +DP R+ + GHSMGG+G A+ +P + +++ A NP+
Sbjct: 100 VRRDYKIDPDRIYMTGHSMGGYGTWSIAMNHPDVFAALAPVAGGGNPL 147
>6FKX-A nrPDB
Length = 324
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 72/192 (37%), Gaps = 20/192 (10%)
Query: 33 AVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKG 92
A L P A PAL G T ++ S+ Y G V A D + G
Sbjct: 75 AKLLRPVAPVEPHPALLQFHGYTGNSGDWSSRLHY----VALGYTVAALDCRGQAGLSVG 130
Query: 93 ED--ESWDFGTGAGFYVDATEDPWKTNY--RMYSYVTEELPQLINANFPVDPQRMSIFGH 148
E E+W A + + +D N R T L Q++ A VDP R++ G+
Sbjct: 131 EAPVENWSM---ASYLLRGIDDDAADNLALRHLFLDTARLAQIVLAMDDVDPDRVAATGY 187
Query: 149 SMGGHGALICALKNPGKYKSVSAFAPICNPVLC----PWGKKAFSGYLGTDQSKWKAYDA 204
S GG L CA P + AP+ P LC W G + ++A D
Sbjct: 188 SQGGGLTLACAALEP----RIRLAAPV-YPFLCDFRRAWEMDLEKGPYNEITTYFRARDP 242
Query: 205 THLVKSYPGSQL 216
HL + S+L
Sbjct: 243 RHLREEEIFSRL 254
>4WJL-A nrPDB
Length = 719
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 138 VDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFS-GYLGTDQ 196
+D +R+SIFG GG+ A + + +K S API + L AFS YLG
Sbjct: 576 IDSKRLSIFGKGYGGYIASMILKSDEKLFKCGSVVAPITDLKLYA---SAFSERYLGMPS 632
Query: 197 SKWKAYDATHLVKSYPG-SQLDILIDQGKDD 226
+ Y A ++ + G + +ILI G D
Sbjct: 633 KEESTYQAASVLHNVHGLKEENILIIHGTAD 663
>4EB0-A nrPDB
Length = 258
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
Query: 122 SYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLC 181
+Y+ P + A +D R+++ GHSMGG G L A +NP S+ A P L
Sbjct: 105 NYLRTSSPSAVRAR--LDANRLAVAGHSMGGGGTLRIAEQNP----SLKAAVP-----LT 153
Query: 182 PW 183
PW
Sbjct: 154 PW 155
>5OLJ-A nrPDB
Length = 723
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 6/127 (4%)
Query: 138 VDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQS 197
VD R+ I+G S GG+ L+ + G +K+ A AP+ + + ++ T +
Sbjct: 582 VDAARIGIWGWSYGGYTTLMSLCRGNGTFKAGIAVAPVADWRF--YDSVYTERFMRTPKE 639
Query: 198 KWKAYDATHLVKSYPGSQLDILIDQGK-DDQFLLDGQLLPDNFIAACTEKKIPVVFRLQE 256
Y + + Q ++LI G DD L +L F A + IP +
Sbjct: 640 NASGYKMSSALDVASQLQGNLLIVSGSADDNVHLQNTML---FTEALVQANIPFDMAIYM 696
Query: 257 GYDHSYY 263
+HS Y
Sbjct: 697 DKNHSIY 703
>1RP1-A nrPDB
Length = 450
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 117 NYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPG 164
N R+ ++ +++AN+ P ++ + GHS+G H A + PG
Sbjct: 122 NVRVVGAQVAQMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG 169
>1Z68-A nrPDB
Length = 719
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 23/164 (14%)
Query: 17 KVFEHDSVELNCKMKFAVYLPPKAE-TGKCPALYWLSGLTCTE--QNFISKSGYHQSASE 73
K E D + L KM LPP+ + + K P L + G C++ ++ + + AS+
Sbjct: 471 KKLEVDEITLWYKM----ILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASK 526
Query: 74 HGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLIN 133
G+V+ D RG +G+ + G Y ED + + I
Sbjct: 527 EGMVIALVDG--RGTAFQGDKLLYAVYRKLGVY--EVEDQ-----------ITAVRKFIE 571
Query: 134 ANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICN 177
F +D +R++I+G S GG+ + + G +K A AP+ +
Sbjct: 572 MGF-IDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSS 614
>6GI5-A nrPDB
Length = 282
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 132 INANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAP 174
+ A P+D R +++GHS GG L PG++ +A +P
Sbjct: 143 VAAQAPLDTARQTLWGHSYGGLLVLHALFTRPGEFARYAAASP 185
>1W52-X nrPDB
Length = 452
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 25/58 (43%)
Query: 117 NYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAP 174
N R+ T L Q + +P+ + I GHS+G H A + G+ V+ P
Sbjct: 122 NIRIVGAETAYLIQQLLTELSYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDP 179
>2VHS-A nrPDB
Length = 217
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 22/55 (40%)
Query: 35 YLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCN 89
Y+ P G+C A Y S E K+G S SE LV + GCN
Sbjct: 12 YVTPVKNQGQCGASYAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCN 66
>3JWE-A nrPDB
Length = 320
Score = 30.4 bits (67), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 145 IFGHSMGGHGALICALKNPGKYKSVSAFAPIC--NP 178
+ GHSMGG A++ A + PG + + +P+ NP
Sbjct: 135 LLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANP 170
>3IL7-A nrPDB
Length = 313
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Query: 32 FAVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIK 91
A L + TGK ++ L+ + + I+ Y QS H ++V+ D + ++
Sbjct: 90 VANMLQERLGTGKVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKITDLT 149
Query: 92 GEDESWDFGTGAGFYV--DATEDPWKTNYRMYS 122
+ FG GAG + + +E +Y M S
Sbjct: 150 DRSTAVLFGDGAGAVIIGEVSEGRGIISYEMGS 182
>5OQM-4 nrPDB
Length = 333
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 107 VDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALK 161
+DA DP + R VTEE P L+ + P+ + F G++I L+
Sbjct: 1 MDAISDPTFKHARSRKQVTEESPSLLTVIIEIAPKLWTTFDEEGNEKGSIIKVLE 55
>6GYM-4 nrPDB
Length = 338
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 107 VDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALK 161
+DA DP + R VTEE P L+ + P+ + F G++I L+
Sbjct: 1 MDAISDPTFKHARSRKQVTEESPSLLTVIIEIAPKLWTTFDEEGNEKGSIIKVLE 55
>1R88-A nrPDB
Length = 280
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 122 SYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKY---KSVSAF 172
++++ ELP + AN + P + G + GG+GA+ A +P ++ S+S F
Sbjct: 93 TFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGF 146
>4TGL-A nrPDB
Length = 269
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 121 YSYVTEELPQLINANFPVDPQ-RMSIFGHSMGGHGALICAL 160
Y V EL + F P ++++ GHS+GG AL+CAL
Sbjct: 115 YGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCAL 155
>1HPL-A nrPDB
Length = 449
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 24/58 (41%)
Query: 117 NYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAP 174
N R+ L ++ ++F P + I GHS+G H A + G ++ P
Sbjct: 121 NVRIVGAEVAYLVGVLQSSFDYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDP 178
>5YP1-A nrPDB
Length = 745
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 138 VDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVL 180
VDP R+ ++G S GG+ L+ K+ Y A AP+ + L
Sbjct: 602 VDPARIGVYGWSNGGYMTLMLLAKHDEAYACGVAGAPVTDWAL 644
>4V2I-A nrPDB
Length = 323
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 117 NYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICAL 160
+Y + YV E QL VDP R++I G S+GG+ + +L
Sbjct: 131 DYAVTKYVAEHSEQL-----NVDPTRLAIAGDSVGGNMTAVVSL 169
>6QPR-A nrPDB
Length = 361
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 121 YSYVTEELPQLINANFPVDPQ-RMSIFGHSMGGHGALICAL 160
Y V EL + F P ++++ GHS+GG AL+CAL
Sbjct: 207 YGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCAL 247
>3KVN-X nrPDB
Length = 632
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 94 DESWDFGTGAGFYVDATEDPWK-TNYRMYSYVTEELPQ 130
DE+W G AGFY E K ++YRM SY+ Q
Sbjct: 395 DEAWRAGVAAGFYRQKLEAGAKDSDYRMNSYMASAFVQ 432
>2OEL-A nrPDB
Length = 413
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 15/74 (20%)
Query: 188 FSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEKK 247
F G +G D AY + L K G +D KDD+ L D +LLP F TE K
Sbjct: 146 FKGMIGRDL----AYLTSELKKQALGG-----VDLVKDDEILFDSELLP--FEKRITEGK 194
Query: 248 IPVVFRLQEGYDHS 261
LQE Y+ +
Sbjct: 195 AA----LQEVYEQT 204
>5THM-A nrPDB
Length = 533
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 134 ANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPW----GKKAFS 189
A+F +PQ + + GHS GG + L+ + +AF+ N L PW G + +
Sbjct: 183 ASFGGEPQNVLLVGHSAGGASVHLQMLREDFGQLAKAAFSFSGN-ALDPWVIQKGARERA 241
Query: 190 GYLGTDQSKWKAYDATHL---VKSYPGSQL 216
LG A D+ L +KS P S+L
Sbjct: 242 FELGRSVGCESAEDSASLKKCLKSKPASEL 271
>1LPA-B nrPDB
Length = 449
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 6/78 (7%)
Query: 97 WDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGAL 156
W G+ G Y A++ N R+ + + + F P + + GHS+G H A
Sbjct: 107 WKGGSRTG-YTQASQ-----NIRIVGAEVAYFVEFLQSAFGYSPSNVHVIGHSLGAHAAG 160
Query: 157 ICALKNPGKYKSVSAFAP 174
+ G ++ P
Sbjct: 161 EAGRRTNGTIGRITGLDP 178
>3HWN-A nrPDB
Length = 258
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 22/55 (40%)
Query: 35 YLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCN 89
Y+ P G+C + + S E K+G S SE LV + GCN
Sbjct: 50 YVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCN 104
>1ETH-A nrPDB
Length = 448
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 6/78 (7%)
Query: 97 WDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGAL 156
W G+ G Y A++ N R+ +++ ++ P + + GHS+G H A
Sbjct: 107 WKGGSRTG-YTQASQ-----NIRIVGAEVAYFVEVLKSSLGYSPSNVHVIGHSLGSHAAG 160
Query: 157 ICALKNPGKYKSVSAFAP 174
+ G + ++ P
Sbjct: 161 EAGRRTNGTIERITGLDP 178
>2Y6V-A nrPDB
Length = 398
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 140 PQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPIC 176
P + GHSMGG AL C + P + + P+
Sbjct: 136 PALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVV 172
>3OF9-A nrPDB
Length = 221
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 22/55 (40%)
Query: 35 YLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCN 89
Y+ P G+C + + S E K+G S SE LV + GCN
Sbjct: 13 YVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCN 67
>1ICF-A nrPDB
Length = 175
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 22/55 (40%)
Query: 35 YLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCN 89
Y+ P G+C + + S E K+G S SE LV + GCN
Sbjct: 12 YVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCN 66
>1CJL-A nrPDB
Length = 312
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 22/55 (40%)
Query: 35 YLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCN 89
Y+ P G+C + + S E K+G S SE LV + GCN
Sbjct: 104 YVTPVKNQGQCGSSWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPEGNEGCN 158
>2PPL-A nrPDB
Length = 485
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 117 NYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPI 175
N R+ ++ ++ + P ++ + GHS+G H A K PG + ++ P+
Sbjct: 147 NVRVVGAQVAQMLDILLTEYSYPPSKVHLIGHSLGAHVAGEAGSKTPGLSR-ITGLDPV 204
>1K4Y-A nrPDB
Length = 534
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 134 ANFPVDPQRMSIFGHSMGGHGALICAL 160
ANF DP ++IFG S GG I L
Sbjct: 184 ANFGGDPGSVTIFGESAGGQSVSILLL 210
>1GPL-A nrPDB
Length = 432
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 117 NYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGA 155
N R+ L Q+++ + P+ + I GHS+G H A
Sbjct: 122 NIRVVGAEVAYLVQVLSTSLNYAPENVHIIGHSLGAHTA 160
>6EOR-A nrPDB
Length = 869
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 138 VDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQS 197
+D R++I G S GG +L+ + P +K A AP+ V + Y+ ++
Sbjct: 719 IDLSRVAIHGWSYGGFLSLMGLIHKPQVFKVAIAGAPVT--VWMAYDTGYTERYMDVPEN 776
Query: 198 KWKAYDATHL---VKSYPGSQLDILIDQGKDDQ 227
Y+A + V+ P +LI G D+
Sbjct: 777 NQHGYEAGSVALHVEKLPNEPNRLLILHGFLDE 809
>2ECF-A nrPDB
Length = 741
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Query: 138 VDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWG 184
VDP R+ + G S GG+ L+ K Y A AP+ + WG
Sbjct: 599 VDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTD-----WG 640
>1LLQ-A nrPDB
Length = 605
Score = 27.3 bits (59), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 46/125 (36%), Gaps = 37/125 (29%)
Query: 181 CPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILID-----------QGKDDQFL 229
P GK A LG Q KW ++ + +D+L D +GKD L
Sbjct: 195 IPVGKLALYVALGGVQPKW----CLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTL 250
Query: 230 LDGQLLPDNFIAACTEK------------KIPVVFRLQEGYDHSYYFIATFITDHIRHHA 277
LD NF+ ACT+K P FRL + Y Y T D I+ A
Sbjct: 251 LD------NFMKACTKKYGQKTLIQFEDFANPNAFRLLDKYQDKY----TMFNDDIQGTA 300
Query: 278 KYLNA 282
+ A
Sbjct: 301 SVIVA 305
>5I4H-A nrPDB
Length = 106
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 22/55 (40%)
Query: 35 YLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCN 89
Y+ P G+C + + S E K+G S SE LV + GCN
Sbjct: 13 YVTPVKNQGQCGSSWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCN 67
>5FV4-A nrPDB
Length = 544
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 134 ANFPVDPQRMSIFGHSMGGHGALICAL 160
ANF DP ++IFG S GG + L
Sbjct: 189 ANFGGDPGSVTIFGESAGGESVSVLVL 215
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
3FCX-A nrPDB 469 e-133
3I6Y-A nrPDB 396 e-111
3LS2-A nrPDB 387 e-108
3E4D-A nrPDB 387 e-108
4B6G-A nrPDB 386 e-108
1PV1-A nrPDB 349 7e-97
4MQM-A nrPDB 169 9e-43
1F0N-A nrPDB 139 1e-33
3WLA-A nrPDB 136 1e-32
3FCY-A nrPDB 126 1e-29
Sequences not found previously or not previously below threshold:
6FKX-A nrPDB 86 1e-17
1R88-A nrPDB 82 4e-16
5CXX-A nrPDB 56 1e-08
5L8S-A nrPDB 49 3e-06
3WYD-A nrPDB 48 6e-06
2EEP-A nrPDB 47 1e-05
4Q1V-A nrPDB 46 2e-05
2XLB-A nrPDB 46 2e-05
2ECF-A nrPDB 44 9e-05
5YP1-A nrPDB 41 6e-04
4HXF-B nrPDB 41 7e-04
6QPR-A nrPDB 41 8e-04
4V2I-A nrPDB 40 0.001
4TGL-A nrPDB 40 0.002
5JRK-A nrPDB 39 0.002
3RLI-A nrPDB 39 0.002
2JBW-A nrPDB 39 0.002
4EB0-A nrPDB 39 0.002
1Z68-A nrPDB 38 0.004
5OLJ-A nrPDB 38 0.004
6GI5-A nrPDB 36 0.022
4WJL-A nrPDB 36 0.025
3JWE-A nrPDB 35 0.044
1XFD-A nrPDB 35 0.047
5XKS-A nrPDB 34 0.061
5KRE-A nrPDB 34 0.067
6EOR-A nrPDB 34 0.071
4Y2Y-A nrPDB 34 0.081
3V48-A nrPDB 34 0.089
3HEA-A nrPDB 34 0.11
1HLG-A nrPDB 33 0.17
1K8Q-A nrPDB 32 0.21
2XMZ-A nrPDB 32 0.26
4QNN-A nrPDB 32 0.27
5AOA-A nrPDB 32 0.29
4CCW-A nrPDB 32 0.34
3RAR-A nrPDB 32 0.34
1C7J-A nrPDB 32 0.39
3KXP-A nrPDB 31 0.51
2GBG-A nrPDB 31 0.59
2AJB-A nrPDB 31 0.61
6ECE-A nrPDB 31 0.64
3V1K-A nrPDB 31 0.64
2Y6V-A nrPDB 30 0.76
6AVW-A nrPDB 30 0.80
2OCI-A nrPDB 30 0.86
1ODT-C nrPDB 30 0.87
3VVL-A nrPDB 30 0.96
2C7B-A nrPDB 30 0.96
5V5V-A nrPDB 30 1.1
3DMF-A nrPDB 30 1.1
1U2E-A nrPDB 30 1.1
1LLF-A nrPDB 30 1.1
2VHS-A nrPDB 30 1.3
2RON-A nrPDB 30 1.3
4Q3K-A nrPDB 30 1.5
1ICF-A nrPDB 30 1.6
1E9L-A nrPDB 29 1.8
3OF9-A nrPDB 29 1.9
3KVN-X nrPDB 29 1.9
3HWN-A nrPDB 29 1.9
1AKN-A nrPDB 29 1.9
1N5W-B nrPDB 29 2.7
3BF8-A nrPDB 29 2.8
1CJL-A nrPDB 29 2.9
5I4H-A nrPDB 29 3.2
2BKL-A nrPDB 29 3.3
3FLA-A nrPDB 29 3.5
4X97-A nrPDB 28 4.6
1RP1-A nrPDB 28 5.1
5YAL-A nrPDB 28 5.1
6G21-A nrPDB 27 7.1
3CQY-A nrPDB 27 7.1
2B20-A nrPDB 27 7.1
>3FCX-A nrPDB
Length = 282
Score = 469 bits (1206), Expect = e-133, Method: Composition-based stats.
Identities = 281/282 (99%), Positives = 281/282 (99%)
Query: 1 MALKQISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQN 60
MALKQISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQN
Sbjct: 1 MALKQISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQN 60
Query: 61 FISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRM 120
FISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRM
Sbjct: 61 FISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRM 120
Query: 121 YSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVL 180
YSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVL
Sbjct: 121 YSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVL 180
Query: 181 CPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFI 240
CPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFI
Sbjct: 181 CPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFI 240
Query: 241 AACTEKKIPVVFRLQEGYDHSYYFIATFITDHIRHHAKYLNA 282
AACTEKKIPVVFRLQE YDHSYYFIATFITDHIRHHAKYLNA
Sbjct: 241 AACTEKKIPVVFRLQEDYDHSYYFIATFITDHIRHHAKYLNA 282
>3I6Y-A nrPDB
Length = 280
Score = 396 bits (1016), Expect = e-111, Method: Composition-based stats.
Identities = 155/283 (54%), Positives = 204/283 (72%), Gaps = 5/283 (1%)
Query: 1 MALKQISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPKAETG-KCPALYWLSGLTCTEQ 59
M+++ +SSNK FGG K + H S LNC M+FA+YLPP+A TG K P LYWLSGLTC+++
Sbjct: 2 MSIENLSSNKSFGGWHKQYSHVSNTLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDE 61
Query: 60 NFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYR 119
NF+ K+G + A+E G+ ++APDTSPRG + +DE +D G GAGFYV+AT+ PW +Y+
Sbjct: 62 NFMQKAGAQRLAAELGIAIVAPDTSPRGEGVA-DDEGYDLGQGAGFYVNATQAPWNRHYQ 120
Query: 120 MYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPV 179
MY YV ELP+LI + FPV +R +I GHSMGGHGAL AL+NP +Y+SVSAF+PI NPV
Sbjct: 121 MYDYVVNELPELIESMFPVSDKR-AIAGHSMGGHGALTIALRNPERYQSVSAFSPINNPV 179
Query: 180 LCPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNF 239
CPWG+KAF+ YLG D W+ YDA+ L+++ + L+DQG+ D F L QL P+
Sbjct: 180 NCPWGQKAFTAYLGKDTDTWREYDASLLMRA-AKQYVPALVDQGEADNF-LAEQLKPEVL 237
Query: 240 IAACTEKKIPVVFRLQEGYDHSYYFIATFITDHIRHHAKYLNA 282
AA + P+ R EGYDHSYYFIA+FI DH+R H+ YLNA
Sbjct: 238 EAAASSNNYPLELRSHEGYDHSYYFIASFIEDHLRFHSNYLNA 280
>3LS2-A nrPDB
Length = 280
Score = 387 bits (995), Expect = e-108, Method: Composition-based stats.
Identities = 148/282 (52%), Positives = 196/282 (69%), Gaps = 5/282 (1%)
Query: 3 LKQISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPKA-ETGKCPALYWLSGLTCTEQNF 61
L+ ISS K GG K + H +V +C M+FAV+LPP A E+ K P LYWLSGLTCT++NF
Sbjct: 2 LENISSVKVSGGWHKQYTHSAVSTHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDENF 61
Query: 62 ISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMY 121
+ K+G + A+E G+ ++APDTSPRG N+ ED S+DF GAGFYV+AT+ P+ T++ MY
Sbjct: 62 MQKAGAFKKAAELGIAIVAPDTSPRGDNVPNED-SYDFAQGAGFYVNATQAPYNTHFNMY 120
Query: 122 SYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLC 181
YV ELP LI +FPV + +I GHSMGGHGAL+ ALKNP Y S SAF+PI NP+ C
Sbjct: 121 DYVVNELPALIEQHFPVTSTK-AISGHSMGGHGALMIALKNPQDYVSASAFSPIVNPINC 179
Query: 182 PWGKKAFSGYLGTDQSKWKAYDATHLV-KSYPGSQLDILIDQGKDDQFLLDGQLLPDNFI 240
PWG KAF+GYLG D++ W YD+ L+ K+ + L +L+ QG D F LD QL P N +
Sbjct: 180 PWGVKAFTGYLGADKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNF-LDEQLKPQNLV 238
Query: 241 AACTEKKIPVVFRLQEGYDHSYYFIATFITDHIRHHAKYLNA 282
A +K P+ +Q GYDHSY+FI++FI H+ H +YL+A
Sbjct: 239 AVAKQKDYPLTLEMQTGYDHSYFFISSFIDQHLVFHHQYLSA 280
>3E4D-A nrPDB
Length = 278
Score = 387 bits (993), Expect = e-108, Method: Composition-based stats.
Identities = 146/278 (52%), Positives = 181/278 (65%), Gaps = 2/278 (0%)
Query: 3 LKQISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQNFI 62
+ IS N FGG+Q VF H S L +M FAVY+PPKA CP +++LSGLTCT N +
Sbjct: 2 MNIISQNTAFGGMQGVFSHQSETLKSEMTFAVYVPPKAIHEPCPVVWYLSGLTCTHANVM 61
Query: 63 SKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYS 122
K Y + ASE GLVV+ PDTSPRG ++ E +W G GAGFY+DATE+PW +Y+MYS
Sbjct: 62 EKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMGKGAGFYLDATEEPWSEHYQMYS 121
Query: 123 YVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCP 182
YVTEELP LI +F D R SIFGHSMGGHGA+ ALKNP ++KS SAFAPI P
Sbjct: 122 YVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVAPSSAD 181
Query: 183 WGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAA 242
W + A YLG D++ W+ YDA LV+ + LIDQGK D FL G L P F A
Sbjct: 182 WSEPALEKYLGADRAAWRRYDACSLVEDG-ARFPEFLIDQGKADSFLEKG-LRPWLFEEA 239
Query: 243 CTEKKIPVVFRLQEGYDHSYYFIATFITDHIRHHAKYL 280
I + R+ + YDHSYYFI+TF+ DH++ HA+ L
Sbjct: 240 IKGTDIGLTLRMHDRYDHSYYFISTFMDDHLKWHAERL 277
>4B6G-A nrPDB
Length = 283
Score = 386 bits (992), Expect = e-108, Method: Composition-based stats.
Identities = 147/279 (52%), Positives = 197/279 (70%), Gaps = 4/279 (1%)
Query: 2 ALKQISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQNF 61
A++ I ++ FGG Q+V+ H + L C+MKFAVYLP E +YWLSGLTCTEQNF
Sbjct: 8 AMELIEQHQIFGGSQQVWAHHAQTLQCEMKFAVYLPNNPENRPLGVIYWLSGLTCTEQNF 67
Query: 62 ISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMY 121
I+KSG+ + A+EH ++V+APDTSPRG + +D ++D G AGFY++ATE PW NY+MY
Sbjct: 68 ITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDD-AYDLGQSAGFYLNATEQPWAANYQMY 126
Query: 122 SYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLC 181
Y+ ELP+LI +FP + +R SI GHSMGGHGAL+ AL+N +Y+SVSAF+PI +P L
Sbjct: 127 DYILNELPRLIEKHFPTNGKR-SIMGHSMGGHGALVLALRNQERYQSVSAFSPILSPSLV 185
Query: 182 PWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIA 241
PWG+KAF+ YLG D+ KW+ YDA L++ Q + IDQG +D+F L QL ++FI
Sbjct: 186 PWGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQ-GMRIDQGLEDEF-LPTQLRTEDFIE 243
Query: 242 ACTEKKIPVVFRLQEGYDHSYYFIATFITDHIRHHAKYL 280
C PV R +GYDHSYYFIA+FI +HI +HA +L
Sbjct: 244 TCRAANQPVDVRFHKGYDHSYYFIASFIGEHIAYHAAFL 282
>1PV1-A nrPDB
Length = 299
Score = 349 bits (896), Expect = 7e-97, Method: Composition-based stats.
Identities = 114/297 (38%), Positives = 169/297 (56%), Gaps = 20/297 (6%)
Query: 3 LKQISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPK------AETGKCPALYWLSGLTC 56
+K + GG H+S M +YLP + P +++LSGLTC
Sbjct: 1 MKVVKEFSVCGGRLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTC 60
Query: 57 TEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDE-SWDFGTGAGFYVDATEDPWK 115
T N K+ + A ++G ++ PDTSPRG + + E SWDFG GAGFY++AT++P+
Sbjct: 61 TPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYA 120
Query: 116 TNYRMYSYVTEELPQLINANFPVDPQ-------RMSIFGHSMGGHGALICAL--KNPGKY 166
+Y+MY Y+ +ELPQ ++++F + ++I GHSMGG+GA+ L + +Y
Sbjct: 121 QHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRY 180
Query: 167 KSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLD-ILIDQGKD 225
KS SAFAPI NP PWG+KAF GYLG ++++W+AYD L+K+ D ILI G
Sbjct: 181 KSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDS 240
Query: 226 DQFLLDGQLLPDNFIAA--CTEKKIPVVFRLQEGYDHSYYFIATFITDHIRHHAKYL 280
D F L+ L P+ + A T + V + G+DHSYYF++TF+ +H HA+ L
Sbjct: 241 DPF-LEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYFVSTFVPEHAEFHARNL 296
>4MQM-A nrPDB
Length = 304
Score = 169 bits (429), Expect = 9e-43, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 83/232 (35%), Gaps = 41/232 (17%)
Query: 36 LPPKAETGKCPALYWLSGLTCTE----QNFISKSGYHQSASEHGLVVIAPDTSPRGCNIK 91
+ + + G A+Y L GL + + + + S GL VI P
Sbjct: 24 IKVQFQGGGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQS--GLSVIMP---------- 71
Query: 92 GEDESWDFGTGAGFYVDATEDPWKTNYRMYSY-----VTEELPQLINANFPVDPQRMSIF 146
G + FY D + P ++N + Y+Y +T E+P + AN V P +
Sbjct: 72 -------VGGQSSFYTDWYQ-PSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAV 123
Query: 147 GHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPW------------GKKAFSGYLGT 194
G SM G ALI A P ++ ++ + NP W G A S + +
Sbjct: 124 GLSMSGGSALILAAYYPQQFPYAASLSGFLNPSEGWWPTLIGLAMNDSGGYNANSMWGPS 183
Query: 195 DQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEK 246
WK D + + I + G L G +P F+ T +
Sbjct: 184 SDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLR 235
>1F0N-A nrPDB
Length = 285
Score = 139 bits (350), Expect = 1e-33, Method: Composition-based stats.
Identities = 45/232 (19%), Positives = 81/232 (34%), Gaps = 38/232 (16%)
Query: 46 PALYWLSGLTCTEQ--NFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGA 103
PA+Y L GL + + + + + GL ++ P G +
Sbjct: 34 PAVYLLDGLRAQDDYNGWDINTPAFEWYYQSGLSIVMP-----------------VGGQS 76
Query: 104 GFYVDAT----EDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICA 159
FY D Y+ +++T ELPQ ++AN V P + G SM G A+I A
Sbjct: 77 SFYSDWYSPACGKAGCQTYKWETFLTSELPQWLSANRAVKPTGSAAIGLSMAGSSAMILA 136
Query: 160 LKNPGKYKSVSAFAPICNPVLC------------PWGKKAFSGYLGTDQSKWKAYDATHL 207
+P ++ + + + +P G KA + + W+ D T
Sbjct: 137 AYHPQQFIYAGSLSALLDPSQGMGPSLIGLAMGDAGGYKAADMWGPSSDPAWERNDPTQQ 196
Query: 208 VKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEGYD 259
+ + + + G L G +P F+ + Q+ Y+
Sbjct: 197 IPKLVANNTRLWVYCGNGTPNELGGANIPAEFLENFVRSS---NLKFQDAYN 245
>3WLA-A nrPDB
Length = 336
Score = 136 bits (341), Expect = 1e-32, Method: Composition-based stats.
Identities = 55/239 (23%), Positives = 86/239 (35%), Gaps = 36/239 (15%)
Query: 14 GLQKVFEHDSVELNCKMKFAVYLPPKAETGKCPALYWLSG-LTCTEQNFI-SKSGYHQSA 71
GL F D K + V +PPK G P + G + T N +SG +
Sbjct: 21 GLNTDFPSDG-----KKRAFVVVPPKDSAGGAPVWVPMVGTVEATNWNLNVPRSGNNAKL 75
Query: 72 SEHGLVVIAP---------DTSPRGCNIKGEDESWDFGT-GAGFYVDATEDPWKTNYRMY 121
+EHG +VI+P + CN G+D W + G DA+ D +KT+
Sbjct: 76 AEHGYMVISPVRQCAEQDPNLGAGACNGVGKD-GWTWNPWNDGRAPDASGDKYKTDAGDD 134
Query: 122 SYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLC 181
E + + + + +D +R+ + G S GG L + S F P+
Sbjct: 135 VRFLEAMVRCVGTKWKLDRKRLFLGGISAGGTMTNRALLFD-------SEFWAGGMPISG 187
Query: 182 PWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFI 240
W Y D + T + + I QG+ + L +L P I
Sbjct: 188 EW-------YSTKDDGSTVPFQETRKMVAAA----PAKIWQGRVGPYPLPSKLDPMVVI 235
>3FCY-A nrPDB
Length = 346
Score = 126 bits (316), Expect = 1e-29, Method: Composition-based stats.
Identities = 45/188 (23%), Positives = 73/188 (38%), Gaps = 12/188 (6%)
Query: 33 AVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKG 92
A Y+ PK E GK PAL G + ++ K Y + G V+A D +G
Sbjct: 97 AKYIKPKTE-GKHPALIRFHGYSSNSGDWNDKLNYVAA----GFTVVAMDVRGQGGQ-SQ 150
Query: 93 EDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQL--INANFP-VDPQRMSIFGHS 149
+ T G + +D + ++ ++ + QL I N P VD R+ + G S
Sbjct: 151 DVGGVTGNTLNGHIIRGLDD--DADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPS 208
Query: 150 MGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVK 209
GG +L CA P K VS + P + W ++ +D H +
Sbjct: 209 QGGGLSLACAALEPRVRKVVSEY-PFLSDYKRVWDLDLAKNAYQEITDYFRLFDPRHERE 267
Query: 210 SYPGSQLD 217
+ ++L
Sbjct: 268 NEVFTKLG 275
>6FKX-A nrPDB
Length = 324
Score = 86.4 bits (212), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/188 (22%), Positives = 69/188 (36%), Gaps = 10/188 (5%)
Query: 33 AVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKG 92
A L P A PAL G T ++ S+ Y G V A D + G
Sbjct: 75 AKLLRPVAPVEPHPALLQFHGYTGNSGDWSSRLHYVA----LGYTVAALDCRGQAGLSVG 130
Query: 93 EDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEE---LPQLINANFPVDPQRMSIFGHS 149
E ++ + A + + +D + ++ + L Q++ A VDP R++ G+S
Sbjct: 131 EAPVENW-SMASYLLRGIDDD-AADNLALRHLFLDTARLAQIVLAMDDVDPDRVAATGYS 188
Query: 150 MGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVK 209
GG L CA P + + P W G + ++A D HL +
Sbjct: 189 QGGGLTLACAALEPRIRLAAPVY-PFLCDFRRAWEMDLEKGPYNEITTYFRARDPRHLRE 247
Query: 210 SYPGSQLD 217
S+L
Sbjct: 248 EEIFSRLG 255
>1R88-A nrPDB
Length = 280
Score = 81.7 bits (200), Expect = 4e-16, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 79/246 (32%), Gaps = 34/246 (13%)
Query: 36 LPPKAETGKCPALYWLSGLTCTEQ--NFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGE 93
+P G A+Y L N+++ + + G+ V+AP
Sbjct: 25 IPVAFLAGGPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAP------------ 72
Query: 94 DESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGH 153
G Y + +D K + ++++ ELP + AN + P + G + GG+
Sbjct: 73 -----AGGAYSMYTNWEQDGSK---QWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGY 124
Query: 154 GALICALKNPGKYKSVSAFAPICNPVLCPW------------GKKAFSGYLGTDQSKWKA 201
GA+ A +P ++ + + P G + +WK
Sbjct: 125 GAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGAIAAGMQQFGGVDTNGMWGAPQLGRWKW 184
Query: 202 YDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEGYDHS 261
+D + + + + ++ A + +R G++
Sbjct: 185 HDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRMFYNQYRSVGGHNGH 244
Query: 262 YYFIAT 267
+ F A+
Sbjct: 245 FDFPAS 250
>5CXX-A nrPDB
Length = 275
Score = 56.3 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 91/267 (34%), Gaps = 49/267 (18%)
Query: 17 KVFEHDSVELNCKMKFAVYLPPK-AETGKCPALYWLSGLTCTEQNFISK-------SGYH 68
K + S + K V LP E K P +Y+L GL E + + +
Sbjct: 27 KKITYYSKVTETERKMNVILPVGYDENKKYPVVYYLHGLMSYEDSMLEDDSTLAIPTNLL 86
Query: 69 QSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEEL 128
+ ++++ PD G + DF Y+ Y EL
Sbjct: 87 KEGRAKEMIIVLPDVYA---PKPGTAVTPDFNP--------------EYYKGYDNFINEL 129
Query: 129 PQLI----NANFPV--DPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCP 182
++I ++ + + ++ G SMG +L V AFAP P + P
Sbjct: 130 IEVIMPYMEEHYSILTGRENTALCGFSMGARTSLYIGYMRSDLIGYVGAFAP--APGITP 187
Query: 183 WGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDI--LIDQGKDDQFLLDGQLLPDNFI 240
G+ +FSG ++ + I LID G +D + GQ P ++
Sbjct: 188 -GEDSFSG----------KHEGLISEDEFRAEIQPIVSLIDCGTNDSVV--GQF-PKSYH 233
Query: 241 AACTEKKIPVVFRLQEGYDHSYYFIAT 267
T ++ G DH + I+
Sbjct: 234 EILTRNNQEHIWFEVPGADHDWNAISA 260
>5L8S-A nrPDB
Length = 604
Score = 49.0 bits (115), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 84/256 (32%), Gaps = 36/256 (14%)
Query: 33 AVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKG 92
A+ K E ++W G + + + +S + + G + AP+
Sbjct: 359 ALLFKAKPENDNGYTIFWPHGGPQSAERKMFRSMFQCFINR-GYTIFAPNFRGSTGYGSA 417
Query: 93 EDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGG 152
+ + G G +D + + + D ++ + G S GG
Sbjct: 418 FTKLVELDWGEGPRLDCIAG----------------IEWLFESGFTDRNKLFLVGGSYGG 461
Query: 153 HGALICALKNPGKYKSV------SAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATH 206
+ AL+ ++ +++V S N V W K +LG + + +
Sbjct: 462 YMALLLHGRHSDYFRAVVDIFGPSDLFTFINSVPPHW-KPIMERWLGDPERDKERFIKDS 520
Query: 207 LVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEGYDHS----- 261
V G +L+ QG D ++ + D +A EK V + + E H
Sbjct: 521 PVTYLDGMVKPMLVIQGAKDPRVVKEE--SDQIVAKLKEKGRDVEYLVLEDEGHGFSKKE 578
Query: 262 -----YYFIATFITDH 272
Y + F+ H
Sbjct: 579 NEIKVYSLMLAFLEKH 594
>3WYD-A nrPDB
Length = 228
Score = 47.8 bits (112), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 58/155 (37%), Gaps = 31/155 (20%)
Query: 28 CKMKFAVYLPPK-AETGKCPALYWLSGLTCTEQNFIS---KSGYHQSASEHGLVVIAPDT 83
M + +Y+P T P + L G+ E ++ + + A G +V P
Sbjct: 19 SHMPYRLYVPTTYDGTKAFPLVIALHGMGGDENSYFDSYQRGAFMIEAENRGYIVACPKG 78
Query: 84 SPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRM 143
A YV P + + ++ + ++ +DP R+
Sbjct: 79 R----------------QPASMYV----GPAERDVM-------DVIAEVRRDYKIDPDRI 111
Query: 144 SIFGHSMGGHGALICALKNPGKYKSVSAFAPICNP 178
+ GHSMGG+G A+ +P + +++ A NP
Sbjct: 112 YMTGHSMGGYGTWSIAMNHPDVFAALAPVAGGGNP 146
>2EEP-A nrPDB
Length = 706
Score = 46.7 bits (109), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/251 (15%), Positives = 83/251 (33%), Gaps = 41/251 (16%)
Query: 40 AETGKCPALYWLSGLTCTEQNFISK------SGYHQSASEHGLVVIAPDTSPRGCNIKGE 93
K P + ++ G ++K G+ ++ G V D+
Sbjct: 480 DPAKKYPVIVYVYG--GPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRGSANRGAAF 537
Query: 94 DESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGH 153
++ + + + ++ VD R+ + G S GG
Sbjct: 538 EQ---------VIHRRLGQTEMADQMCGVDFLK------SQSW-VDADRIGVHGWSYGGF 581
Query: 154 GALICALKNPGKYKSVSAFAPIC--NPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVKSY 211
L + +K A P+ N +G++ F + + YDA +L+K
Sbjct: 582 MTTNLMLTHGDVFKVGVAGGPVIDWNRYEIMYGERYFDA--PQENP--EGYDAANLLKRA 637
Query: 212 PGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEGYDHS---------Y 262
+ +++ G D ++ L F+ AC + + + + ++H+ Y
Sbjct: 638 GDLKGRLMLIHGAIDPVVVWQHSL--LFLDACVKARTYPDYYVYPSHEHNVMGPDRVHLY 695
Query: 263 YFIATFITDHI 273
I + TDH+
Sbjct: 696 ETITRYFTDHL 706
>4Q1V-A nrPDB
Length = 710
Score = 45.9 bits (107), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 75/229 (32%), Gaps = 30/229 (13%)
Query: 40 AETGKCPALYWLSG---LTCTEQNFISKS-GYHQSASEHGLVVIAPDTSPRGCNIKGEDE 95
K P + ++ G C + + + G+ + G ++ D +
Sbjct: 484 DPAKKYPVIVYVYGGPHAQCVTGGWQNGARGWDTYMASKGYIMFTIDNRGSSNRGLTFE- 542
Query: 96 SWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGA 155
A F E+ + + LP VD +R+ + G S GGH
Sbjct: 543 ------NATFRRLGIEEGKDQVKGVE--FLKSLPY-------VDSERIGVHGWSFGGHMT 587
Query: 156 LICALKNPGKYKSVSAFAPICNPVLCPWGKKAF---SGYLGTDQSKWKAYDATHLVKSYP 212
L+ P +K A P+ + WG Y+ T +S + Y +L
Sbjct: 588 TALMLRYPEIFKVGVAGGPVID-----WGYYEIMYGERYMDTPESNPEGYKECNLKNLAD 642
Query: 213 GSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEGYDHS 261
+ +LI D + L +F+ AC + + + + H+
Sbjct: 643 QLKGHLLIIHDDHDDTCVPQHTL--SFMKACVDARTYPDLFIYPCHKHN 689
>2XLB-A nrPDB
Length = 320
Score = 45.5 bits (106), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 46/130 (35%), Gaps = 15/130 (11%)
Query: 27 NCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPR 86
+ K++ +P +TG PAL G + + I HG +
Sbjct: 66 HSKIEGFYAVP--DQTGPHPALVRFHGYNASYDDGIHDIVNWAL---HGYATFGMLVRGQ 120
Query: 87 GCNIKGEDESWDFGTGAGFYVDA-TEDPWKTNYRMYSYVTEELPQLIN--ANFP-VDPQR 142
G ED S G G + T+ + Y V + + + +FP VD R
Sbjct: 121 GG---SEDTSVTPG---GHALGWMTKGILSKDTYYYRGVYLDAVRALEVIQSFPEVDEHR 174
Query: 143 MSIFGHSMGG 152
+ + G S GG
Sbjct: 175 IGVIGGSQGG 184
>2ECF-A nrPDB
Length = 741
Score = 43.6 bits (101), Expect = 9e-05, Method: Composition-based stats.
Identities = 38/240 (15%), Positives = 74/240 (30%), Gaps = 26/240 (10%)
Query: 27 NCKMKFAVYLPPK-AETGKCPALYWLSGLTCTE---QNFISKSG--YHQSASEHGLVVIA 80
+ ++V P + P ++ G ++ ++ + ++Q ++ G VV +
Sbjct: 498 KTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFS 557
Query: 81 PDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDP 140
D DFG + + + VDP
Sbjct: 558 LDNRG------TPRRGRDFG----------GALYGKQGTVEVADQLRGVAWLKQQPWVDP 601
Query: 141 QRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWK 200
R+ + G S GG+ L+ K Y A AP+ + L L
Sbjct: 602 ARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGLYDSHYTERYMDLPARNDA-- 659
Query: 201 AYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEGYDH 260
Y ++ G + +L+ G D +L + ++A ++ P G H
Sbjct: 660 GYREARVLTHIEGLRSPLLLIHGMADDNVLFTN--STSLMSALQKRGQPFELMTYPGAKH 717
>5YP1-A nrPDB
Length = 745
Score = 40.9 bits (94), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 69/226 (30%), Gaps = 24/226 (10%)
Query: 40 AETGKCPALYWLSGLTCTE-----QNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGED 94
+ P + ++ G + S S ++Q ++ G VV D
Sbjct: 515 DPKKQYPVVVFVYGGPAAQTVTRAWPGRSDSFFNQYLAQQGYVVFTLDNRGTPRR----- 569
Query: 95 ESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHG 154
G G + + + + ++ + + + VDP R+ ++G S GG+
Sbjct: 570 -----GAAFGGALYGKQGTVEVDDQLRG------IEWLKSQAFVDPARIGVYGWSNGGYM 618
Query: 155 ALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGS 214
L+ K+ Y A AP+ + L L + G+
Sbjct: 619 TLMLLAKHDEAYACGVAGAPVTDWALYDTHYTERYMDLPKANEAGYREASVFTHVDGIGA 678
Query: 215 QLDILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEGYDH 260
+LI DD L ++ ++ P G H
Sbjct: 679 GKLLLIHGMADDNVLFTNSTK---LMSELQKRGTPFELMTYPGAKH 721
>4HXF-B nrPDB
Length = 622
Score = 40.5 bits (93), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 17/120 (14%)
Query: 35 YLPPK-AETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGE 93
Y+ P+ E K P + ++ G + K AS+ G ++ +PRG N E
Sbjct: 367 YIKPEIKEGEKAPVIVFVHGGPKGMYGYYFKYEMQLMASK-GYYIVY--VNPRGSNGYSE 423
Query: 94 DESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGH 153
D F + E +++ + + + + D +R+ I G S GG+
Sbjct: 424 D----------FALRVLERTGLEDFQD---ILNGIEEFLRLEPQADRERIGITGISYGGY 470
>6QPR-A nrPDB
Length = 361
Score = 40.5 bits (93), Expect = 8e-04, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 14/156 (8%)
Query: 121 YSYVTEELPQLINANFPVDPQ-RMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPV 179
Y V EL + F P ++++ GHS+GG AL+CAL + + +S+
Sbjct: 207 YGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDLYQREEGLSSSNLFLYTQ 266
Query: 180 LCPW-GKKAFSGYLGTDQSKWKAY-DATHLVKSYPGSQLDILIDQGKD----DQFLLDGQ 233
P G AF+ Y+ + ++ + +V P + L G++ D Q
Sbjct: 267 GQPRVGDPAFANYVVSTGIPYRRTVNERDIVPHLPPAAFGFL-HAGEEYWITDNSPETVQ 325
Query: 234 LLPDNFIAA-CTEKKIPVVFRLQEGYDH-SYYFIAT 267
+ + + C+ +P L DH SY+ I T
Sbjct: 326 VCTSDLETSDCSNSIVPFTSVL----DHLSYFGINT 357
>4V2I-A nrPDB
Length = 323
Score = 40.1 bits (92), Expect = 0.001, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 64/183 (34%), Gaps = 43/183 (23%)
Query: 36 LPPKAETGKCPALYWLSGL------TCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCN 89
+ P+ T + P + + G T T + + +A+ LV + + SP
Sbjct: 68 IRPQGNTDRLPVIVYFHGAGWVMGDTGTHDRLVRELSVRANAA---LVFVDYERSPEA-- 122
Query: 90 IKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHS 149
Y A E +Y + YV E QL VDP R++I G S
Sbjct: 123 ---------------RYPVAIEQ----DYAVTKYVAEHSEQL-----NVDPTRLAIAGDS 158
Query: 150 MGGHGALICALKNPGK-YKSVSA---FAPICNP--VLCPWGKKAFSGYL--GTDQSKWKA 201
+GG+ + +L + ++A F P+ + + + A +L W
Sbjct: 159 VGGNMTAVVSLLAQERGGPDITAQVLFYPVTDADFDNGSYTEFANGPWLTKPAMDWFWNQ 218
Query: 202 YDA 204
Y
Sbjct: 219 YLP 221
>4TGL-A nrPDB
Length = 269
Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 14/156 (8%)
Query: 121 YSYVTEELPQLINANFPVDPQ-RMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPV 179
Y V EL + F P ++++ GHS+GG AL+CAL + + +S+
Sbjct: 115 YGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDLYQREEGLSSSNLFLYTQ 174
Query: 180 LCPW-GKKAFSGYLGTDQSKWKAY-DATHLVKSYPGSQLDILIDQGKD----DQFLLDGQ 233
P G AF+ Y+ + ++ + +V P + L G + D Q
Sbjct: 175 GQPRVGNPAFANYVVSTGIPYRRTVNERDIVPHLPPAAFGFL-HAGSEYWITDNSPETVQ 233
Query: 234 LLPDNFIAA-CTEKKIPVVFRLQEGYDH-SYYFIAT 267
+ + + C+ +P L DH SY+ I T
Sbjct: 234 VCTSDLETSDCSNSIVPFTSVL----DHLSYFGINT 265
>5JRK-A nrPDB
Length = 756
Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 68/185 (36%), Gaps = 17/185 (9%)
Query: 34 VYLPP-KAETGKCPALYWLSGLTCTEQNFISKSGYH---QSASEHGLVVIAPD--TSPRG 87
V LP + PA+ G ++ + ++ Q +E G VV+ + + +
Sbjct: 462 VLLPRGHRAADRHPAVVVTHGTDADDRFAEPANQWNYPVQLLAERGYVVLLLNDPSPGQS 521
Query: 88 CNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFG 147
++ +W G G + W T + E+ + A +DP R+ I G
Sbjct: 522 KDLMDAMHAWLRGKGPPDPETVQQKLWLTG----VHSFEDAVTELAAEGLIDPARVGIAG 577
Query: 148 HSMGGHGALICALKNPGKYKSVSAF-APICNPVLCPWGKKAFSG-YLGT----DQSKWKA 201
+S G + + N +++ S+ P G+ ++ Y G + +W+
Sbjct: 578 YSR-GSQMVNVTVTNSKMFRAASSGDGGFLEPAGYATGRSSYDAVYGGAPLSDNIERWRR 636
Query: 202 YDATH 206
+ +
Sbjct: 637 FAPSL 641
>3RLI-A nrPDB
Length = 270
Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 44/146 (30%), Gaps = 32/146 (21%)
Query: 37 PPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDES 96
P AE G L + G T T + + + A G V P G +
Sbjct: 33 PFYAENGPVGVLL-VHGFTGTPHSMRPLAEAYAKA---GYTVCLPRLKGHGTH------- 81
Query: 97 WDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGAL 156
ED +T + + EE + Q + + G SMGG L
Sbjct: 82 -------------YEDMERTTFHDWVASVEEGYGWLKQRC----QTIFVTGLSMGGTLTL 124
Query: 157 ICALKNPGKYKSVSAFAPICNPVLCP 182
A +P + PI V P
Sbjct: 125 YLAEHHPD----ICGIVPINAAVDIP 146
>2JBW-A nrPDB
Length = 386
Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 44/144 (30%), Gaps = 27/144 (18%)
Query: 21 HDSVELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIA 80
H+ V M V +P G PA+ L GL T++ + G+
Sbjct: 130 HELVVDGIPMPVYVRIPEGP--GPHPAVIMLGGLESTKEESFQMEN---LVLDRGMATAT 184
Query: 81 PDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDP 140
D +G + +K Y T + L+ +
Sbjct: 185 FDGPGQGEMFE----------------------YKRIAGDYEKYTSAVVDLLTKLEAIRN 222
Query: 141 QRMSIFGHSMGGHGALICALKNPG 164
+ + G S+GG+ AL A P
Sbjct: 223 DAIGVLGRSLGGNYALKSAACEPR 246
>4EB0-A nrPDB
Length = 258
Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 32/128 (25%)
Query: 46 PALYWLSGLTCTEQNFISKSGYH----------QSASEHGLVVIAPDTSPRGCNIKGEDE 95
+Y+ +G + T GY + + HG VV+ +T+ R
Sbjct: 39 GVIYYPTGTSLTFGGIAMSPGYTADASSLAWLGRRLASHGFVVLVINTNSRFD------- 91
Query: 96 SWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGA 155
Y D+ Y+ P + A +D R+++ GHSMGG G
Sbjct: 92 ----------YPDSRASQLSAALN---YLRTSSPSAVRA--RLDANRLAVAGHSMGGGGT 136
Query: 156 LICALKNP 163
L A +NP
Sbjct: 137 LRIAEQNP 144
>1Z68-A nrPDB
Length = 719
Score = 38.2 bits (87), Expect = 0.004, Method: Composition-based stats.
Identities = 52/224 (23%), Positives = 88/224 (39%), Gaps = 44/224 (19%)
Query: 17 KVFEHDSVELNCKMKFAVYLPPK-AETGKCPALYWLSGLTCTEQ-------NFISKSGYH 68
K E D + L KM LPP+ + K P L + G C++ N+IS
Sbjct: 471 KKLEVDEITLWYKM----ILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWIS----- 521
Query: 69 QSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEEL 128
AS+ G+V+ D RG +G+ + G Y + +T +
Sbjct: 522 YLASKEGMVIALVD--GRGTAFQGDKLLYAVYRKLGVY------------EVEDQIT-AV 566
Query: 129 PQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAF 188
+ I F +D +R++I+G S GG+ + + G +K A AP+ + W A
Sbjct: 567 RKFIEMGF-IDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSS-----WEYYAS 620
Query: 189 S-----GYLGTDQSKWKAY-DATHLVKSYPGSQLDILIDQGKDD 226
L T + Y ++T + ++ +D L+ G D
Sbjct: 621 VYTERFMGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTAD 664
>5OLJ-A nrPDB
Length = 723
Score = 38.2 bits (87), Expect = 0.004, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 59/174 (33%), Gaps = 9/174 (5%)
Query: 95 ESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQL-----INANFPVDPQRMSIFGHS 149
+ + G A + W+ M V E Q+ I VD R+ I+G S
Sbjct: 534 KGYVVACVDGRGTGARGEEWRKCTYMQLGVFESDDQIAAATAIGQLPYVDAARIGIWGWS 593
Query: 150 MGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVK 209
GG+ L+ + G +K+ A AP+ + + + + V
Sbjct: 594 YGGYTTLMSLCRGNGTFKAGIAVAPVADWRFYDSVYTERFMRTPKENASGYKMSSALDVA 653
Query: 210 SYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEGYDHSYY 263
S L +++ DD L + F A + IP + +HS Y
Sbjct: 654 SQLQGNL-LIVSGSADDNVHLQNTM---LFTEALVQANIPFDMAIYMDKNHSIY 703
>6GI5-A nrPDB
Length = 282
Score = 35.9 bits (81), Expect = 0.022, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 17/117 (14%)
Query: 132 INANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGY 191
+ A P+D R +++GHS GG L PG++ +A +P W A G
Sbjct: 143 VAAQAPLDTARQTLWGHSYGGLLVLHALFTRPGEFARYAAASPSL-----WWRDGAILG- 196
Query: 192 LGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEKKI 248
+ L + G + ++L+ +G + G L + A
Sbjct: 197 -----------ERAGLEQRLRGKRAELLLWRGSAEPASPRGSLKAEPGQAMARLVDD 242
>4WJL-A nrPDB
Length = 719
Score = 35.5 bits (80), Expect = 0.025, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 18/149 (12%)
Query: 138 VDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFS-GYLGTDQ 196
+D +R+SIFG GG+ A + + +K S API + L AFS YLG
Sbjct: 576 IDSKRLSIFGKGYGGYIASMILKSDEKLFKCGSVVAPITDLKLY---ASAFSERYLGMPS 632
Query: 197 SKWKAYDATHLVKSYPGSQLD-ILIDQGKDDQ---FLLDGQLLPDNFIAACTEKKIPVVF 252
+ Y A ++ + G + + ILI G D F +L+ A +
Sbjct: 633 KEESTYQAASVLHNVHGLKEENILIIHGTADTKVHFQHSAELIKHLIKAGV---NYTMQV 689
Query: 253 RLQEGYD-------HSYYFIATFITDHIR 274
EG++ H Y I F +D ++
Sbjct: 690 YPDEGHNVSEKSKYHLYSTILKFFSDCLK 718
>3JWE-A nrPDB
Length = 320
Score = 34.7 bits (78), Expect = 0.044, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 116 TNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPI 175
+++ ++ + + ++P P + + GHSMGG A++ A + PG + + +P+
Sbjct: 108 SDFHVFVRDVLQHVDSMQKDYPGLP--VFLLGHSMGGAIAILTAAERPGHFAGMVLISPL 165
Query: 176 C--NPVLC 181
NP
Sbjct: 166 VLANPESA 173
>1XFD-A nrPDB
Length = 723
Score = 34.7 bits (78), Expect = 0.047, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 58/153 (37%), Gaps = 13/153 (8%)
Query: 127 ELPQLINANFPVDPQRMSIFGHSMGGHGAL-ICALK---NPGKYKSVSAFAPICNPVLCP 182
E + + +D R+++FG GG+ + I K + SA +PI + L
Sbjct: 564 EAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLY- 622
Query: 183 WGKKAFS-GYLGTDQSKWKAYDATHLVKSYPG-SQLDILIDQGKDDQFLLDGQLLPDNFI 240
AFS YLG +AY+ T + + LI D+ + Q +
Sbjct: 623 --ASAFSERYLGLHGLDNRAYEMTKVAHRVSALEEQQFLIIHPTADE-KIHFQHTAELIT 679
Query: 241 AACTEKKIPVVFRLQEGYDHSYYFIATFITDHI 273
K LQ D S+YF ++ + H+
Sbjct: 680 QLIRGKANY---SLQIYPDESHYFTSSSLKQHL 709
>5XKS-A nrPDB
Length = 256
Score = 34.3 bits (77), Expect = 0.061, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 39/132 (29%), Gaps = 31/132 (23%)
Query: 51 LSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDAT 110
L G T + Q+ + E G V P G +
Sbjct: 26 LHGFTGSPQSMRPLGEAYH---EAGYTVCGPRLKGHGTH--------------------Y 62
Query: 111 EDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVS 170
ED KT + + E + + + + G SMGG L A +P +
Sbjct: 63 EDMEKTTCQDWIDSVEAGYEWLKNRCGT----IFVTGLSMGGTLTLYMAEHHPE----IC 114
Query: 171 AFAPICNPVLCP 182
API + P
Sbjct: 115 GIAPINAAINMP 126
>5KRE-A nrPDB
Length = 239
Score = 34.0 bits (76), Expect = 0.067, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 18/49 (36%)
Query: 133 NANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLC 181
+ R+ I G SMGG A+ A +N V A + N
Sbjct: 110 EVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA 158
>6EOR-A nrPDB
Length = 869
Score = 34.0 bits (76), Expect = 0.071, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Query: 138 VDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGT-DQ 196
+D R++I G S GG +L+ + P +K A AP+ + G + +Q
Sbjct: 719 IDLSRVAIHGWSYGGFLSLMGLIHKPQVFKVAIAGAPVTVWMAYDTGYTERYMDVPENNQ 778
Query: 197 SKWKAYDATHLVKSYPGSQLDILIDQGKDDQ 227
++A V+ P +LI G D+
Sbjct: 779 HGYEAGSVALHVEKLPNEPNRLLILHGFLDE 809
>4Y2Y-A nrPDB
Length = 561
Score = 34.0 bits (76), Expect = 0.081, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 56/168 (33%), Gaps = 35/168 (20%)
Query: 18 VFEHDSVELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLV 77
H V + +++ E G PA+ G +++ S + ++ G
Sbjct: 236 DMSHGYVTVKPRVRLHFV-----ELGSGPAVCLCHGF---PESWYSWRYQIPALAQAGYR 287
Query: 78 VIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFP 137
V+A D G ++ P Y M + +E+ ++
Sbjct: 288 VLAMDMKGYGE--------------------SSAPPEIEEYCMEV-LCKEMVTFLD---K 323
Query: 138 VDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAF-APIC--NPVLCP 182
+ + GH GG AL P + ++V++ P NP + P
Sbjct: 324 LGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSP 371
>3V48-A nrPDB
Length = 268
Score = 33.6 bits (75), Expect = 0.089, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 41/123 (33%), Gaps = 10/123 (8%)
Query: 30 MKFAVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCN 89
MK ++ PP A+ P + +SGL + ++ + + E V+ D G N
Sbjct: 3 MKLSLSPPPYADA---PVVVLISGLGGSGSYWLPQL----AVLEQEYQVVCYDQRGTGNN 55
Query: 90 IKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHS 149
E + A A +Y + + L L+ +D S
Sbjct: 56 PDTLAEDYSIAQMAAELHQALVAAGIEHYAVVGH---ALGALVGMQLALDYPASVTVLIS 112
Query: 150 MGG 152
+ G
Sbjct: 113 VNG 115
>3HEA-A nrPDB
Length = 271
Score = 33.6 bits (75), Expect = 0.11, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Query: 110 TEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSV 169
++ PW N Y +++ QLI +D + +++ G SMGG ++ +
Sbjct: 60 SDQPWTGN--DYDTFADDIAQLIEH---LDLKEVTLVGFSMGGGDVARYIARHGSARVAG 114
Query: 170 SAFAPICNPVLC 181
P+
Sbjct: 115 LVLLGAVTPIFG 126
>1HLG-A nrPDB
Length = 371
Score = 32.8 bits (73), Expect = 0.17, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 49/146 (33%), Gaps = 20/146 (13%)
Query: 37 PPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSA---SEHGLVVIAPDTSPRGCNIKGE 93
TG+ P ++ GL + N+IS + A ++ G V G
Sbjct: 42 KNSGNTGQRPVVFLQHGLLASATNWISNLPNNSLAFILADAGYDV-----------WLGN 90
Query: 94 DESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQR-MSIFGHSMGG 152
+ +Y + + W + +LP I+ Q+ + GHS G
Sbjct: 91 SRGNTWARRNLYYSPDSVEFWA--FSFDEMAKYDLPATIDFIVKKTGQKQLHYVGHSQGT 148
Query: 153 HGALICALKNP---GKYKSVSAFAPI 175
I NP + K+ A AP+
Sbjct: 149 TIGFIAFSTNPSLAKRIKTFYALAPV 174
>1K8Q-A nrPDB
Length = 377
Score = 32.4 bits (72), Expect = 0.21, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 46/140 (32%), Gaps = 20/140 (14%)
Query: 43 GKCPALYWLSGLTCTEQNFISKSGYHQSA---SEHGLVVIAPDTSPRGCNIKGEDESWDF 99
G+ P + GL + N+IS + A ++ G V G +
Sbjct: 56 GRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDV-----------WLGNSRGNTW 104
Query: 100 GTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDP-QRMSIFGHSMGGHGALIC 158
+Y + + W + +LP I+ ++ GHS G I
Sbjct: 105 ARRNLYYSPDSVEFWA--FSFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIA 162
Query: 159 ALKNP---GKYKSVSAFAPI 175
NP + K+ A AP+
Sbjct: 163 FSTNPKLAKRIKTFYALAPV 182
>2XMZ-A nrPDB
Length = 269
Score = 32.0 bits (71), Expect = 0.26, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 48/134 (35%), Gaps = 37/134 (27%)
Query: 30 MKFAVYLPPKAETGKCPALYWLSGLTC---TEQNFISKSGYHQSASEHGLVVIAPDTSPR 86
M + ET + L +L G T N I K + VI D
Sbjct: 3 MTHYKFYEANVETNQ--VLVFLHGFLSDSRTYHNHIEKFTDN-------YHVITIDLPGH 53
Query: 87 GCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIF 146
G + DE+W+F Y+T L ++++ + +++F
Sbjct: 54 GEDQSSMDETWNF----------------------DYITTLLDRILD---KYKDKSITLF 88
Query: 147 GHSMGGHGALICAL 160
G+SMGG AL A+
Sbjct: 89 GYSMGGRVALYYAI 102
>4QNN-A nrPDB
Length = 300
Score = 32.0 bits (71), Expect = 0.27, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 14/135 (10%)
Query: 21 HDSVELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIA 80
HD L+ K + K T K ++ G T + + + + +VI
Sbjct: 23 HDFYTLDTIKKHNEF---KKSTIKHQVVFITHGFTSSADTENFLAMAKALSDKGNYLVIL 79
Query: 81 PDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDP 140
D C E+ S G +Y A +N R+ + +++ + V
Sbjct: 80 IDWRVAACT---EEMS---GIQLAYYSYA-----ASNTRLVGNYIATVTKMLVQKYNVPM 128
Query: 141 QRMSIFGHSMGGHGA 155
+ + GHS+G H +
Sbjct: 129 ANIRLIGHSLGAHTS 143
>5AOA-A nrPDB
Length = 286
Score = 32.0 bits (71), Expect = 0.29, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 59/157 (37%), Gaps = 32/157 (20%)
Query: 130 QLINAN---FPVDPQRMSIFGHSMGGHGA----LICALKNPGKYKSVSAFAP---ICNPV 179
+ + + VDPQ++ G S GGH A ++ L+ P + ++S+ A + NPV
Sbjct: 104 RWVRQHAAELGVDPQKIVASGGSAGGHLAACTVMVPDLEAPEEDHTISSQANAAILFNPV 163
Query: 180 LC-------------PWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQGKDD 226
L W ++ LGT+ KA H +++ ++I G D
Sbjct: 164 LILSREGLKDHVPRQDWEER-LRERLGTEP---KAVSPYHHIRAGLP---PMIIFHGTAD 216
Query: 227 QFLLDGQLLPDNFIAACTEKKIPVVFRLQEGYDHSYY 263
+ + F A + EG H ++
Sbjct: 217 NTVPFETIR--LFAEAMKKAGNRCELVPFEGAAHGFF 251
>4CCW-A nrPDB
Length = 299
Score = 31.7 bits (70), Expect = 0.34, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 61/181 (33%), Gaps = 16/181 (8%)
Query: 105 FYVDATEDPWKTNYRMYSYVTEELPQLINANF-PVDPQRMSIFGHSMGGHGALICALKNP 163
+ VD D K+ S + + F + ++ + G S+GG + L+ P
Sbjct: 84 YAVDIIGDKNKSIPENLSGTRTDYANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMP 143
Query: 164 GKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQS-------KWKAYDATHLVKSYPGSQL 216
+ KS + +P P+ + LG S W D L +
Sbjct: 144 ERVKSAAILSP--AETFLPFHHDFYKYALGLTASNGVEKFLNWMMTDQNVLHPIFVKQFQ 201
Query: 217 DILIDQGKDDQFLLDGQLLPDNFI-AACTEKKIPVVFRLQEG---YD-HS-YYFIATFIT 270
++ Q P F ++P++ L E YD HS + ++F+
Sbjct: 202 AGVMWQDGSRNPNPKADGFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRASSFVP 261
Query: 271 D 271
D
Sbjct: 262 D 262
>3RAR-A nrPDB
Length = 534
Score = 31.7 bits (70), Expect = 0.34, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 51/158 (32%), Gaps = 20/158 (12%)
Query: 17 KVFEHDSVELNCKMKFAVYLPPKAETG-KCPALYWL--SGLTCTEQNFISKSGYHQSASE 73
KVFE S + V PP + G P + W+ G + + +
Sbjct: 85 KVFEAVSPSSEDCLTINVVRPPGTKAGANLPVMLWIFGGGFEVGGTSTFPPAQMITKSIA 144
Query: 74 HGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLIN 133
G +I + R + +G AG D + N + Q +
Sbjct: 145 MGKPIIHVSVNYRVSS---------WGFLAG---DEIKAEGSANAGLKDQRLG--MQWVA 190
Query: 134 AN---FPVDPQRMSIFGHSMGGHGALICALKNPGKYKS 168
N F DP +++IFG S G + L N G
Sbjct: 191 DNIAAFGGDPTKVTIFGESAGSMSVMCHILWNDGDNTY 228
>1C7J-A nrPDB
Length = 489
Score = 31.7 bits (70), Expect = 0.39, Method: Composition-based stats.
Identities = 40/253 (15%), Positives = 73/253 (28%), Gaps = 37/253 (14%)
Query: 32 FAVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIK 91
V+ P P + W+ G + G V++
Sbjct: 85 VNVFAPDTPSQN-LPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVV----------- 132
Query: 92 GEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINAN---FPVDPQRMSIFGH 148
++ G ++ + ++ + N + + + N F DP +++FG
Sbjct: 133 --TLNYRLGPFGFMHLSSFDEAYSDNLGLLDQ--AAALKWVRENISAFGGDPDNVTVFGE 188
Query: 149 SMGGHG-----ALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKA-- 201
S GG A+ A K S + AF LG ++S+
Sbjct: 189 SAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQAASTAAAFLQVLGINESQLDRLH 248
Query: 202 -------YDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRL 254
A ++ + L Q D L + P+ IA IP++
Sbjct: 249 TVAAEDLLKAADQLRIAEKENIFQLFFQPALDPKTLPEE--PEKSIAEGAASGIPLLIGT 306
Query: 255 QEGYDHSYYFIAT 267
D Y F +
Sbjct: 307 TR--DEGYLFFTS 317
>3KXP-A nrPDB
Length = 314
Score = 31.3 bits (69), Expect = 0.51, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 43/138 (31%), Gaps = 32/138 (23%)
Query: 41 ETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFG 100
E G P + + G+T F + + IA D G
Sbjct: 64 EKGSGPLMLFFHGITSNSAVFEPLM--IRLSDR--FTTIAVDQRGHG------------- 106
Query: 101 TGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICAL 160
D +T Y Y +++ LI + + GHS+G ++ A
Sbjct: 107 ---------LSDKPETGYEANDY-ADDIAGLIRT---LARGHAILVGHSLGARNSVTAAA 153
Query: 161 KNPGKYKSVSA--FAPIC 176
K P +SV A F P
Sbjct: 154 KYPDLVRSVVAIDFTPYI 171
>2GBG-A nrPDB
Length = 730
Score = 30.9 bits (68), Expect = 0.59, Method: Composition-based stats.
Identities = 47/286 (16%), Positives = 96/286 (33%), Gaps = 32/286 (11%)
Query: 3 LKQISSNKCFGGLQKVFEHDSVEL------NCKMKFAVYLPPK-AETGKCPALYWLSGLT 55
L+ + N + + + S +L + + + LPP ++ K P L +
Sbjct: 455 LRVLEDNSALDKMLQDVQMPSKKLDFIVLNETRFWYQMILPPHFDKSKKYPLLIDVYAGP 514
Query: 56 CTE-QNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPW 114
C++ + + + + +++A RG +G+ G T +
Sbjct: 515 CSQKADAAFRLNWATYLASTENIIVA-SFDGRGSGYQGDKIMHAINKRLG-----TLEVE 568
Query: 115 KTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAP 174
E Q + F VD +R++I+G S GG+ + G +K A AP
Sbjct: 569 DQ--------IEAARQFLKMGF-VDSKRVAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAP 619
Query: 175 ICNPVLCPWGKKAFSGYLGTDQSKWKAY-DATHLVKSYPGSQLDILIDQGKDDQ---FLL 230
+ L T + Y ++T + ++ Q++ L+ G D F
Sbjct: 620 VSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQ 679
Query: 231 DGQLLPDNFIAACTEKKIPVVFRLQ-----EGYDHSYYFIATFITD 271
Q+ A + + + H Y ++ F+
Sbjct: 680 SAQISKALVDAGVDFQAMWYTDEDHGIASSTAHQHIYSHMSHFLQQ 725
>2AJB-A nrPDB
Length = 728
Score = 30.9 bits (68), Expect = 0.61, Method: Composition-based stats.
Identities = 49/288 (17%), Positives = 101/288 (35%), Gaps = 36/288 (12%)
Query: 3 LKQISSNKCFGGLQKVFEHDSVELN------CKMKFAVYLPPK-AETGKCPALYWLSGLT 55
L+ + N + + + S +L+ K + + LPP ++ K P L +
Sbjct: 453 LRVLEDNSALDKMLQDVQMPSKKLDVINLHGTKFWYQMILPPHFDKSKKYPLLIEVYAGP 512
Query: 56 CTEQ-NFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPW 114
C+++ + + + + + +++A RG +G+ G
Sbjct: 513 CSQKVDTVFRLSWATYLASTENIIVA-SFDGRGSGYQGDKIMHAINRRLG---------- 561
Query: 115 KTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAP 174
+ + + E Q F VD +R++I+G S GG+ + G +K A AP
Sbjct: 562 --TFEVEDQI-EATRQFSKMGF-VDDKRIAIWGWSYGGYVTSMVLGAGSGVFKCGIAVAP 617
Query: 175 ICNPVLCPWGKKAFSGYLGTDQSKWKAY-DATHLVKSYPGSQLDILIDQGKDDQ---FLL 230
+ L T + Y ++T + ++ Q++ L+ G D F
Sbjct: 618 VSKWEYYDSVYTERYMGLPTPEDNLDYYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQ 677
Query: 231 DGQLLPDNFIAAC-------TEKKIPVVFRLQEGYDHSYYFIATFITD 271
QL A T++ + + H Y ++ F+
Sbjct: 678 SAQLSKALVDAGVDFQTMWYTDEDHGIASNMAH--QHIYTHMSHFLKQ 723
>6ECE-A nrPDB
Length = 303
Score = 30.9 bits (68), Expect = 0.64, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 125 TEELPQ-LINANFPVDPQRMSIFGHSMGGHGALICA 159
EE+ Q ++ V + I GH++GGH A A
Sbjct: 86 FEEMVQFCSDSAAGVAGDGVYIGGHALGGHIAFYLA 121
>3V1K-A nrPDB
Length = 286
Score = 30.9 bits (68), Expect = 0.64, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 137 PVDPQRMSIFGHSMGGHGALICALKNPGK 165
+D R + G+SMGG AL AL+ P +
Sbjct: 100 ALDIDRAHLVGNSMGGATALNFALEYPDR 128
>2Y6V-A nrPDB
Length = 398
Score = 30.5 bits (67), Expect = 0.76, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 140 PQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPIC 176
P + GHSMGG AL C + P + + P+
Sbjct: 136 PALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVV 172
>6AVW-A nrPDB
Length = 230
Score = 30.5 bits (67), Expect = 0.80, Method: Composition-based stats.
Identities = 44/222 (19%), Positives = 64/222 (28%), Gaps = 42/222 (18%)
Query: 48 LYWLSGLTCTEQNFISKSGYHQSASEHGLVV-IAPDT--SPRGCNIKGEDESWDFGTGAG 104
+ WL GL +SE + P +P CN SW A
Sbjct: 8 ILWLHGLG-DSGPANEPIQTQFKSSELSNASWLFPSAPFNPVTCNNGAVMRSWFDVPEAP 66
Query: 105 FYVDATEDPWKTNYRMYSYVTEELPQLINANF--PVDPQRMSIFGHSMGGHGALICALKN 162
F V P + + + + + +I+ +P+ + I G S GG L L
Sbjct: 67 FKV---GSPIDESSVLEA--VKNVHAIIDQEIAEGTNPENVFICGLSQGGALTLASVLLY 121
Query: 163 PGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQ 222
P G SG++ S + + IL
Sbjct: 122 PKTLG----------------GGAVLSGWVPFTSSIISQF-------PEEAKKTPILWSH 158
Query: 223 GKDDQ---FLLDGQLLPDNFIAACTEKKIPVVFRLQEGYDHS 261
G DD+ F LP A T F+ G HS
Sbjct: 159 GTDDRMVLFEAGQAALPFLKEAGVT-----CEFKAYPGLGHS 195
>2OCI-A nrPDB
Length = 254
Score = 30.5 bits (67), Expect = 0.86, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 51/161 (31%), Gaps = 34/161 (21%)
Query: 122 SYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLC 181
+ + ++ + +++S+ G S GG ALI A K P +
Sbjct: 75 DFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIH-----------KMV 123
Query: 182 PWGKKAFSG------YLG-TDQSKWKAYDATHLVK----SYPGSQLDILID--------- 221
WG A+ Y G D SKW L Y + +D
Sbjct: 124 IWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLP 183
Query: 222 QGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEGYDHSY 262
G + LL P + +K P+V R + H +
Sbjct: 184 DGNICRHLLPRVQCPALIVHG---EKDPLVPRFHADFIHKH 221
>1ODT-C nrPDB
Length = 318
Score = 30.5 bits (67), Expect = 0.87, Method: Composition-based stats.
Identities = 41/258 (15%), Positives = 86/258 (33%), Gaps = 35/258 (13%)
Query: 40 AETGKCPALYWLSGLTCT-EQNFISKSGYHQSASEHGLVVIAPDTSPR--GCNIKGEDES 96
+ G PA+ G + + + + HG + +
Sbjct: 77 DKEGPHPAIVKYHGYNASYDGEIHEMVNW----ALHGYATFGMLVRGQQSSEDTSISPHG 132
Query: 97 WDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGAL 156
G +D ++ Y E +I++ VD R+ + G + GG +
Sbjct: 133 HALGWMTKGILDKDTYYYRGVYLDAVRALE----VISSFDEVDETRIGVTGGAQGGGLTI 188
Query: 157 ICALKN--PG----KYKSVSAFAPICN-PVLCPWGK-KAFSGYLGTDQSKWKA------Y 202
A + P Y +S F + + P+ + +F G+ +++ +A +
Sbjct: 189 AAAALSDIPKAAVADYPYLSNFERAIDVALEEPYLEINSFFRRNGSPETEVQAMKTLSYF 248
Query: 203 DATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEGYDHSY 262
D +L ++ +L+ G L+D P AA + ++ + H Y
Sbjct: 249 DIMNLADR---VKVPVLMSIG-----LIDKVTPPSTVFAAYNHLETKKELKVYRYFGHEY 300
Query: 263 YFIATFITDHIRHHAKYL 280
I F T+ + ++L
Sbjct: 301 --IPAFQTEKLAFFKQHL 316
>3VVL-A nrPDB
Length = 394
Score = 30.5 bits (67), Expect = 0.96, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Query: 145 IFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKA--Y 202
+ G SMGG AL ++P ++ + + + + ++ W Y
Sbjct: 165 VVGASMGGMSALALLARHPELARTHISLSGAVHALPFSIAVRSLQREAIRSDPGWLQGHY 224
Query: 203 D 203
D
Sbjct: 225 D 225
>2C7B-A nrPDB
Length = 311
Score = 30.1 bits (66), Expect = 0.96, Method: Composition-based stats.
Identities = 51/261 (19%), Positives = 90/261 (34%), Gaps = 53/261 (20%)
Query: 29 KMKFAVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHG-LVVIAPDTSPRG 87
++ VY P KA PA+ + G + + + S VV++ D
Sbjct: 59 SIRARVYFPKKAA--GLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVD----- 111
Query: 88 CNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFG 147
+ F A ED + + + +EL VDP R+++ G
Sbjct: 112 ---------YRLAPEYKF-PTAVEDAYAA-LKWVADRADEL--------GVDPDRIAVAG 152
Query: 148 HSMGGHGALICALKN----PGKYKSVSAFAPICNPVLCP------WGKKAFSGYLGTDQS 197
S GG+ A + ++ + K P+ N P +G A + L +
Sbjct: 153 DSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGVPTASLVEFGV-AETTSLPIELM 211
Query: 198 KW----------KAYD--ATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFIAACTE 245
W +AYD A+ L+ G L+ + D +G+L + A
Sbjct: 212 VWFGRQYLKRPEEAYDFKASPLLADLGGL-PPALVVTAEYDPLRDEGELYAYK-MKASGS 269
Query: 246 KKIPVVFR-LQEGYDHSYYFI 265
+ + V F + G+ Y F+
Sbjct: 270 RAVAVRFAGMVHGFVSFYPFV 290
>5V5V-A nrPDB
Length = 582
Score = 30.1 bits (66), Expect = 1.1, Method: Composition-based stats.
Identities = 42/223 (18%), Positives = 79/223 (35%), Gaps = 41/223 (18%)
Query: 15 LQKVFEHDSVELNCKMKFAVYLPPKAE---TGKCPALYWLSGLTCTEQNFISKSGYHQ-- 69
L + L K A PP + +GK P + +L G +++ +G
Sbjct: 104 LNLYVPTEDGPLTKKRDEATLNPPDTDIRDSGKKPVMLFLHG-----GSYMEGTGNMFDG 158
Query: 70 -SASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEEL 128
+ +G V++A ++ G GF + K NY + + +
Sbjct: 159 SVLAAYGNVIVA-------------TLNYRLGVL-GFLSTGDQAA-KGNYGLLDQI--QA 201
Query: 129 PQLIN---ANFPVDPQRMSIFGHSMGGH--GALICALKNPGKYKSVSAFAPICNPVLCPW 183
+ ++ A+F DP+R++IFG G LI + + G ++ A + W
Sbjct: 202 LRWLSENIAHFGGDPERITIFGSGAGASCVNLLILSHHSEGLFQKAIAQSGTAISS---W 258
Query: 184 GKK----AFSGYLGTDQSKWKAYDATHLVKSYPGSQLDILIDQ 222
++ L + D+T V+ L+DQ
Sbjct: 259 SVNYQPLKYTRLLAA-KVGCDREDSTEAVECLRRKSSRELVDQ 300
>3DMF-A nrPDB
Length = 381
Score = 30.1 bits (66), Expect = 1.1, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 44/157 (28%), Gaps = 21/157 (13%)
Query: 113 PWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNP--GKYKSVS 170
PW+ Y V LP + + MGG L +K
Sbjct: 94 PWEAAAGAYDLVVLALPAGRGTAYVQASLVAAARALRMGGRLYLAGDKNKGFERYFKEAR 153
Query: 171 AF--APICNPVLCPWGKKAFSGYLGTDQSK------WKAYDATHLVKSYPGSQLDILIDQ 222
A + P+ L ++ W+A+ A L Y L +
Sbjct: 154 ALLGYGVVVRREGPYRV----ALLEKEKEAPPLPSLWRAFSARILGAEYTFHHLPGVFSA 209
Query: 223 GKDDQFLLDGQLLPDNFIAACTEKKIPVVFRLQEGYD 259
GK D L + A E+ P R ++ D
Sbjct: 210 GKVDPASL-------LLLEALQERLGPEGVRGRQVLD 239
>1U2E-A nrPDB
Length = 289
Score = 30.1 bits (66), Expect = 1.1, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 138 VDPQRMSIFGHSMGGHGALICALKNPGK 165
+D ++ + G+SMGGH ++ LK P +
Sbjct: 104 LDIAKIHLLGNSMGGHSSVAFTLKWPER 131
>1LLF-A nrPDB
Length = 534
Score = 30.1 bits (66), Expect = 1.1, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 48/162 (29%), Gaps = 27/162 (16%)
Query: 2 ALKQISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPKAETG-KCPALYWL--SGLTCTE 58
AL + +K F Q V L V PP + G P + W+ G
Sbjct: 77 ALDLVMQSKVF---QAVLPQSEDCL----TINVVRPPGTKAGANLPVMLWIFGGGFEIGS 129
Query: 59 QNFISKSGYHQSASEHGLVVIAPDTSPRG---CNIKGEDESWDFGTGAGFYVDATEDPWK 115
+ + G +I + R + G+D + AG W
Sbjct: 130 PTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSGNAGLKDQRLGMQWV 189
Query: 116 TNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALI 157
+ A F DP +++IFG S G L
Sbjct: 190 ADN--------------IAGFGGDPSKVTIFGESAGSMSVLC 217
>2VHS-A nrPDB
Length = 217
Score = 29.7 bits (65), Expect = 1.3, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 30/82 (36%)
Query: 35 YLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGED 94
Y+ P G+C A Y S E K+G S SE LV + GCN D
Sbjct: 12 YVTPVKNQGQCGASYAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMD 71
Query: 95 ESWDFGTGAGFYVDATEDPWKT 116
++ + G P++
Sbjct: 72 YAFQYVQDNGGLDSEESYPYEA 93
>2RON-A nrPDB
Length = 242
Score = 29.7 bits (65), Expect = 1.3, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
Query: 125 TEELPQLINANFPVDPQRMSI-FGHSMGGHGALICALKNPGK--YKSVSAFAPICNP 178
EEL L + P R + FGHSMGG A K + + + I P
Sbjct: 61 LEELTDLYKQELNLRPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQAVIISAIQPP 117
>4Q3K-A nrPDB
Length = 260
Score = 29.7 bits (65), Expect = 1.5, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 138 VDPQRMSIFGHSMGGHGALICA 159
++P ++++ G S GGH A A
Sbjct: 123 INPDKIAVIGFSAGGHLATTLA 144
>1ICF-A nrPDB
Length = 175
Score = 29.7 bits (65), Expect = 1.6, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 30/82 (36%)
Query: 35 YLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGED 94
Y+ P G+C + + S E K+G S SE LV + GCN D
Sbjct: 12 YVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMD 71
Query: 95 ESWDFGTGAGFYVDATEDPWKT 116
++ + G P++
Sbjct: 72 YAFQYVQDNGGLDSEESYPYEA 93
>1E9L-A nrPDB
Length = 377
Score = 29.3 bits (64), Expect = 1.8, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 36/123 (29%), Gaps = 8/123 (6%)
Query: 81 PDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDP 140
P G N +D G A VD+ WK + + P + DP
Sbjct: 196 PKDGYTGENSPLYKSPYDIGKSADLNVDSIISYWKDHGAASEKLIVGFPAYGHTFILSDP 255
Query: 141 QRMSIFGHSMGGH-------GALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLG 193
+ I ++ + + A + + A P P+ + ++G
Sbjct: 256 SKTGIGAPTISTGPPGKYTDESGLLAYYEVCTFLNEGATEVWDAPQEVPYAYQGNE-WVG 314
Query: 194 TDQ 196
D
Sbjct: 315 YDN 317
>3OF9-A nrPDB
Length = 221
Score = 29.3 bits (64), Expect = 1.9, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 30/82 (36%)
Query: 35 YLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGED 94
Y+ P G+C + + S E K+G S SE LV + GCN D
Sbjct: 13 YVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMD 72
Query: 95 ESWDFGTGAGFYVDATEDPWKT 116
++ + G P++
Sbjct: 73 YAFQYVQDNGGLDSEESYPYEA 94
>3KVN-X nrPDB
Length = 632
Score = 29.3 bits (64), Expect = 1.9, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 94 DESWDFGTGAGFYVDATED-PWKTNYRMYSYVTEELPQLINANFPVD 139
DE+W G AGFY E ++YRM SY+ Q + D
Sbjct: 395 DEAWRAGVAAGFYRQKLEAGAKDSDYRMNSYMASAFVQYQENRWWAD 441
>3HWN-A nrPDB
Length = 258
Score = 29.3 bits (64), Expect = 1.9, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 30/82 (36%)
Query: 35 YLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGED 94
Y+ P G+C + + S E K+G S SE LV + GCN D
Sbjct: 50 YVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMD 109
Query: 95 ESWDFGTGAGFYVDATEDPWKT 116
++ + G P++
Sbjct: 110 YAFQYVQDNGGLDSEESYPYEA 131
>1AKN-A nrPDB
Length = 579
Score = 29.3 bits (64), Expect = 1.9, Method: Composition-based stats.
Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 21/159 (13%)
Query: 33 AVYLPP--KAETGKCPALYWLSG---LTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRG 87
+++P K + P + W+ G L Q S Y E + RG
Sbjct: 84 NIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEE---------IATRG 134
Query: 88 CNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFG 147
N+ ++ G GF + ++ + F DP +++FG
Sbjct: 135 -NVIVVTFNYRVGPL-GFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDNITLFG 192
Query: 148 HSMGGHGA--LICALKNPGKYKSVSAFAPICNPVLCPWG 184
S GG + N G K + + + LCPW
Sbjct: 193 ESAGGASVSLQTLSPYNKGLIKRAISQSGV---GLCPWA 228
>1N5W-B nrPDB
Length = 809
Score = 29.0 bits (63), Expect = 2.7, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 17/107 (15%)
Query: 71 ASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGA----GFYVDATEDP----WKTNYRMYS 122
EH + VIAPD N G + A G V ED T++
Sbjct: 255 LPEHKIHVIAPDIGGGFGNKVGAYSGYVCAVVASIVLGVPVKWVEDRMENLSTTSFARDY 314
Query: 123 YVTEELPQLINANFPVDPQRMSIFGHSMGGHGAL-ICALKNPGKYKS 168
++T EL D + +++ H + HGA CA +P K+ +
Sbjct: 315 HMTTELAAT------KDGKILAMRCHVLADHGAFDACA--DPSKWPA 353
>3BF8-A nrPDB
Length = 255
Score = 28.6 bits (62), Expect = 2.8, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Query: 119 RMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGK 165
Y + ++L ++A + + GHSMGG + P +
Sbjct: 62 MNYPAMAQDLVDTLDAQ---QIDKATFIGHSMGGKAVMALTALAPDR 105
>1CJL-A nrPDB
Length = 312
Score = 28.6 bits (62), Expect = 2.9, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 30/82 (36%)
Query: 35 YLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGED 94
Y+ P G+C + + S E K+G S SE LV + GCN D
Sbjct: 104 YVTPVKNQGQCGSSWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPEGNEGCNGGLMD 163
Query: 95 ESWDFGTGAGFYVDATEDPWKT 116
++ + G P++
Sbjct: 164 YAFQYVQDNGGLDSEESYPYEA 185
>5I4H-A nrPDB
Length = 106
Score = 28.6 bits (62), Expect = 3.2, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 30/82 (36%)
Query: 35 YLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGED 94
Y+ P G+C + + S E K+G S SE LV + GCN D
Sbjct: 13 YVTPVKNQGQCGSSWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMD 72
Query: 95 ESWDFGTGAGFYVDATEDPWKT 116
++ + G P++
Sbjct: 73 YAFQYVQDNGGLDSEESYPYEA 94
>2BKL-A nrPDB
Length = 695
Score = 28.6 bits (62), Expect = 3.3, Method: Composition-based stats.
Identities = 40/238 (16%), Positives = 68/238 (28%), Gaps = 33/238 (13%)
Query: 16 QKVFEHDSVELNCKMKFAVYLPPKAETGKCPALYWLSGLTCTEQNFISKSGYHQSASEHG 75
++VF M F V+ G P L + G +S G
Sbjct: 418 EQVFYASKDGTKVPM-FVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGG 476
Query: 76 LVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINAN 135
+ +A + G K + AG ++ L+
Sbjct: 477 VYAVA-NLRGGGEYGKAWHD-------AGRL--------DKKQNVFDDFHAAAEYLVQQK 520
Query: 136 FPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICN-------PVLCPWGKKAF 188
+ P+R++I+G S GG + P Y +V P+ + W +
Sbjct: 521 Y-TQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGSGRTWIPEYG 579
Query: 189 SGYLGTDQSKWKAYDATHLVKSYP--------GSQLDILIDQGKDDQFLLDGQLLPDN 238
+ D AY H V+ + D +D +F+ Q P N
Sbjct: 580 TAEKPEDFKTLHAYSPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGN 637
>3FLA-A nrPDB
Length = 267
Score = 28.6 bits (62), Expect = 3.5, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 130 QLINANFPVDPQRMSIFGHSMGGHGALICALKNPG 164
+L+ P + +++FGHSMG AL+ P
Sbjct: 75 RLLEVLRPFGDRPLALFGHSMGAIIGYELALRMPE 109
>4X97-A nrPDB
Length = 380
Score = 28.2 bits (61), Expect = 4.6, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 32/93 (34%), Gaps = 6/93 (6%)
Query: 99 FGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALIC 158
+G G V W+ L ++I + + + + HSMG L
Sbjct: 116 WGYTRGEDVRGAPYDWRRAPNENGPYFLALREMIEEMYQLYGGPVVLVAHSMGNMYTLYF 175
Query: 159 ALKNPGKY--KSVSAFAPICNPVLCPWGKKAFS 189
+ P + K + AF + PWG A +
Sbjct: 176 LQRQPQAWKDKYIRAFVSL----GAPWGGVAKT 204
>1RP1-A nrPDB
Length = 450
Score = 27.8 bits (60), Expect = 5.1, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 127 ELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPG 164
++ +++AN+ P ++ + GHS+G H A + PG
Sbjct: 132 QMLSMLSANYSYSPSQVQLIGHSLGAHVAGEAGSRTPG 169
>5YAL-A nrPDB
Length = 342
Score = 27.8 bits (60), Expect = 5.1, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 133 NANFPVDPQRMSIFGHSMGGHGAL 156
+ VD +R+ + GHS+GG A+
Sbjct: 175 GSELRVDARRIGVAGHSIGGASAV 198
>6G21-A nrPDB
Length = 507
Score = 27.4 bits (59), Expect = 7.1, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 111 EDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSI 145
P++ + Y YV E P F V +++
Sbjct: 315 GQPFQYSADWYRYVVYENPNWDATKFSVRDAAVAL 349
>3CQY-A nrPDB
Length = 370
Score = 27.4 bits (59), Expect = 7.1, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 30/97 (30%), Gaps = 15/97 (15%)
Query: 148 HSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQSKWKAYDA--- 204
++GG GA + + + V I N G A YL + + +D
Sbjct: 139 IALGGQGAPLVPAFHQQTFAQVGKKRVILN-----IGGIANITYLPGNSEEVLGFDTGPG 193
Query: 205 -------THLVKSYPGSQLDILIDQGKDDQFLLDGQL 234
VK+ + GK D LL L
Sbjct: 194 NTLIDAWVQQVKNESYDKNGAWAASGKTDPQLLAQLL 230
>2B20-A nrPDB
Length = 403
Score = 27.4 bits (59), Expect = 7.1, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 9/78 (11%)
Query: 108 DATEDPWKTNYRMYSYVTEELPQLINANFPVDP--QRMSIFGHSMGGHGALICALKNPGK 165
A E P ++ + V +EL L+ P R + G S GG AL L P +
Sbjct: 243 RAHELPCNADF--WLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPER 300
Query: 166 YKSVSAFAPICNPVLCPW 183
+ V + + W
Sbjct: 301 FGCVLSQSG-----SYWW 313
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.307 0.127 0.339
Lambda K H
0.267 0.0386 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,915,896
Number of Sequences: 36641
Number of extensions: 419263
Number of successful extensions: 1328
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 1182
Number of HSP's gapped (non-prelim): 146
length of query: 282
length of database: 10,336,785
effective HSP length: 96
effective length of query: 186
effective length of database: 6,819,249
effective search space: 1268380314
effective search space used: 1268380314
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 58 (27.0 bits)