BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P0C870 (316 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5NFN-A nrPDB 651 0.0 4QU2-A nrPDB 597 e-171 4QSZ-A nrPDB 591 e-169 3AL6-A nrPDB 64 6e-11 4Z1V-A nrPDB 60 9e-10 3KTS-A nrPDB 31 0.88 4RX1-A nrPDB 28 5.5 5FOY-A nrPDB 28 5.7 4PEG-A nrPDB 28 6.3 3ZFS-A nrPDB 27 8.6 3AZQ-A nrPDB 27 9.3 >5NFN-A nrPDB Length = 335 Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/316 (100%), Positives = 316/316 (100%) Query: 1 MAEAALEAVRSELREFPAAARELCVPLAVPYLDKPPTPLHFYRDWVCPNRPCIIRNALQH 60 MAEAALEAVRSELREFPAAARELCVPLAVPYLDKPPTPLHFYRDWVCPNRPCIIRNALQH Sbjct: 20 MAEAALEAVRSELREFPAAARELCVPLAVPYLDKPPTPLHFYRDWVCPNRPCIIRNALQH 79 Query: 61 WPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRGDRFMMPAERRLPLSFVLDVLEGRA 120 WPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRGDRFMMPAERRLPLSFVLDVLEGRA Sbjct: 80 WPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRGDRFMMPAERRLPLSFVLDVLEGRA 139 Query: 121 QHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEAAAVTSLHKD 180 QHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEAAAVTSLHKD Sbjct: 140 QHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEAAAVTSLHKD 199 Query: 181 HYENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGTFKVVDEEAMEKVPWIPL 240 HYENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGTFKVVDEEAMEKVPWIPL Sbjct: 200 HYENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGTFKVVDEEAMEKVPWIPL 259 Query: 241 DPLAPDLARYPSYSQAQALRCTVRAGEMLYLPALWFHHVQQSQGCIAVNFWYDMEYDLKY 300 DPLAPDLARYPSYSQAQALRCTVRAGEMLYLPALWFHHVQQSQGCIAVNFWYDMEYDLKY Sbjct: 260 DPLAPDLARYPSYSQAQALRCTVRAGEMLYLPALWFHHVQQSQGCIAVNFWYDMEYDLKY 319 Query: 301 SYFQLLDSLTKASGLD 316 SYFQLLDSLTKASGLD Sbjct: 320 SYFQLLDSLTKASGLD 335 >4QU2-A nrPDB Length = 318 Score = 597 bits (1539), Expect = e-171, Method: Compositional matrix adjust. Identities = 284/316 (89%), Positives = 301/316 (95%) Query: 1 MAEAALEAVRSELREFPAAARELCVPLAVPYLDKPPTPLHFYRDWVCPNRPCIIRNALQH 60 MAEAALEAVR L+EFPAAAR+L VP VPYLD+PP+PL FYRDWVCPNRPCIIRNALQH Sbjct: 3 MAEAALEAVRRALQEFPAAARDLNVPRVVPYLDEPPSPLCFYRDWVCPNRPCIIRNALQH 62 Query: 61 WPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRGDRFMMPAERRLPLSFVLDVLEGRA 120 WPALQKWSL Y RATVGSTEVSVAVTPDGYADAVRGDRF+MPAERRLP+S VLDVLEGRA Sbjct: 63 WPALQKWSLSYLRATVGSTEVSVAVTPDGYADAVRGDRFVMPAERRLPISHVLDVLEGRA 122 Query: 121 QHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEAAAVTSLHKD 180 QHPGVLYVQKQCSNLP+ELPQLL D+ESHVPWASE+LGKMPDAVNFWLG+A+AVTSLHKD Sbjct: 123 QHPGVLYVQKQCSNLPTELPQLLSDIESHVPWASESLGKMPDAVNFWLGDASAVTSLHKD 182 Query: 181 HYENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGTFKVVDEEAMEKVPWIPL 240 HYENLYCVVSGEKHFL HPPSDRPFIPY LYTPATYQLTEEGTF+VVDEEAMEKVPWIPL Sbjct: 183 HYENLYCVVSGEKHFLLHPPSDRPFIPYNLYTPATYQLTEEGTFRVVDEEAMEKVPWIPL 242 Query: 241 DPLAPDLARYPSYSQAQALRCTVRAGEMLYLPALWFHHVQQSQGCIAVNFWYDMEYDLKY 300 DPLAPDL +YPSYSQAQAL CTVRAGEMLYLPALWFHHVQQS GCIAVNFWYDMEYDLKY Sbjct: 243 DPLAPDLTQYPSYSQAQALHCTVRAGEMLYLPALWFHHVQQSHGCIAVNFWYDMEYDLKY 302 Query: 301 SYFQLLDSLTKASGLD 316 SYFQL+D+LT+A+GLD Sbjct: 303 SYFQLMDTLTRATGLD 318 >4QSZ-A nrPDB Length = 687 Score = 591 bits (1523), Expect = e-169, Method: Compositional matrix adjust. Identities = 276/308 (89%), Positives = 293/308 (95%) Query: 9 VRSELREFPAAARELCVPLAVPYLDKPPTPLHFYRDWVCPNRPCIIRNALQHWPALQKWS 68 VR L+EFPAAAR+L VP VPYLD+PP+PL FYRDWVCPNRPCIIRNALQHWPALQKWS Sbjct: 380 VRRALQEFPAAARDLNVPRVVPYLDEPPSPLCFYRDWVCPNRPCIIRNALQHWPALQKWS 439 Query: 69 LPYFRATVGSTEVSVAVTPDGYADAVRGDRFMMPAERRLPLSFVLDVLEGRAQHPGVLYV 128 L Y RATVGSTEVSVAVTPDGYADAVRGDRF+MPAERRLP+S VLDVLEGRAQHPGVLYV Sbjct: 440 LSYLRATVGSTEVSVAVTPDGYADAVRGDRFVMPAERRLPISHVLDVLEGRAQHPGVLYV 499 Query: 129 QKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEAAAVTSLHKDHYENLYCV 188 QKQCSNLP+ELPQLL D+ESHVPWASE+LGKMPDAVNFWLG+A+AVTSLHKDHYENLYCV Sbjct: 500 QKQCSNLPTELPQLLSDIESHVPWASESLGKMPDAVNFWLGDASAVTSLHKDHYENLYCV 559 Query: 189 VSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGTFKVVDEEAMEKVPWIPLDPLAPDLA 248 VSGEKHFL HPPSDRPFIPY LYTPATYQLTEEGTF+VVDEEAMEKVPWIPLDPLAPDL Sbjct: 560 VSGEKHFLLHPPSDRPFIPYNLYTPATYQLTEEGTFRVVDEEAMEKVPWIPLDPLAPDLT 619 Query: 249 RYPSYSQAQALRCTVRAGEMLYLPALWFHHVQQSQGCIAVNFWYDMEYDLKYSYFQLLDS 308 +YPSYSQAQAL CTVRAGEMLYLPALWFHHVQQS GCIAVNFWYDMEYDLKYSYFQL+D+ Sbjct: 620 QYPSYSQAQALHCTVRAGEMLYLPALWFHHVQQSHGCIAVNFWYDMEYDLKYSYFQLMDT 679 Query: 309 LTKASGLD 316 LT+A+GLD Sbjct: 680 LTRATGLD 687 >3AL6-A nrPDB Length = 338 Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 60/261 (22%), Positives = 97/261 (37%), Gaps = 52/261 (19%) Query: 48 PNRPCIIRNALQHWPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRG---------DR 98 P R ++ + P KW++ Y G EV + V D + D+ Sbjct: 48 PQRKPLVLEGIDLGPCTSKWTVDYLSQVGGKKEVKIHVAAVAQMDFISKNFVYRTLPFDQ 107 Query: 99 FMMPAERRLPLSFVLDVLE-------GRAQHPGVLYVQKQCSNLPSELPQLLPDLESHVP 151 + A F + E G V ++KQ L ++ P+ Sbjct: 108 LVQRAAEEKHKEFFVSEDEKYYLRSLGEDPRKDVADIRKQFPLLKGDIK--FPEFFKEEQ 165 Query: 152 WASEALGKMPDAVNFWLGEAAAVTSLHKDHYENLYCVVSGEKHFLFHPPSDRPFIPYELY 211 + S + W H D +NL V+G+K + P D + LY Sbjct: 166 FFSSVFRISSPGLQLWT---------HYDVMDNLLIQVTGKKRVVLFSPRDAQY----LY 212 Query: 212 TPATYQLTEEGTFKVVDEEAMEKVPWIPLDPLAPDLARYPSYSQAQALRCTVRAGEMLYL 271 T K + +D PDLA+YP +S+A+ C++ AG++L++ Sbjct: 213 LKGT------------------KSEVLNID--NPDLAKYPLFSKARRYECSLEAGDVLFI 252 Query: 272 PALWFHHVQQSQGCIAVN-FW 291 PALWFH+V + + VN FW Sbjct: 253 PALWFHNVISEEFGVGVNIFW 273 >4Z1V-A nrPDB Length = 352 Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 61/260 (23%), Positives = 102/260 (39%), Gaps = 41/260 (15%) Query: 51 PCIIRNALQHWPALQKWSLPYFRATVGSTEVSVAVTPDG---YADAVRGDRF--MMPAER 105 P ++ + +PAL KW L Y + +G+ + SV Y D + F P Sbjct: 64 PVVLTDTNLVYPAL-KWDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFKPRSN 122 Query: 106 RLPLSF--VLDVLEGRAQHPG--VLYVQKQCSNLPSELPQLLPD-LESHVPWASEALGKM 160 R + F ++ L+ Q G LY+Q+ ++ +++ D L + W ++ GK Sbjct: 123 REEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGR--KIVMDFLGFNWNWINKQQGKR 180 Query: 161 P----DAVNFWLGEAAAVTSLHKDHYENLYCVVSGEKHFLFHPPSD-RPFIPYELYTPAT 215 + +G VT H D +N + + G K + PP PY ++ P Sbjct: 181 GWGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCD 240 Query: 216 YQLTEEGTFKVVDEEAMEKVPWIPLDPLAPDLARYPSYSQAQALRCTVRAGEMLYLPALW 275 Q +D PD R+P++ V G++LY+P W Sbjct: 241 RQSQ--------------------VDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYW 280 Query: 276 FHHVQ---QSQGCIAVNFWY 292 +HH++ I VNFWY Sbjct: 281 WHHIESLLNGGITITVNFWY 300 >3KTS-A nrPDB Length = 192 Score = 30.8 bits (68), Expect = 0.88, Method: Compositional matrix adjust. Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 8/107 (7%) Query: 85 VTPDGYADAVRGDRFMMPAERRLPLSFVLDVLEGRAQHPGVLYVQKQCSNLPSELPQLLP 144 + PDG + RG+ M + ++ L +++ A + GV +QK + LP ++P Sbjct: 81 ICPDGII-STRGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIP 139 Query: 145 D------LESHVPWASEALGKMPDAVNFWLGEAA-AVTSLHKDHYEN 184 + + H+P + L + + VN + A AVT+ +K +E Sbjct: 140 EQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLWEG 186 >4RX1-A nrPDB Length = 223 Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust. Identities = 14/36 (38%), Positives = 16/36 (44%) Query: 119 RAQHPGVLYVQKQCSNLPSELPQLLPDLESHVPWAS 154 R P L+V LP EL L L + PWAS Sbjct: 74 RGGRPNALFVVASVQALPEELAGLAHTLTLNFPWAS 109 >5FOY-A nrPDB Length = 370 Score = 28.1 bits (61), Expect = 5.7, Method: Compositional matrix adjust. Identities = 14/47 (29%), Positives = 21/47 (44%) Query: 216 YQLTEEGTFKVVDEEAMEKVPWIPLDPLAPDLARYPSYSQAQALRCT 262 Y L E T D + +PW+ L+ +ARYP ++ L T Sbjct: 316 YVLASEFTLHRSDGTQVNTIPWVALNDNYTTIARYPHFASEPLLGNT 362 >4PEG-A nrPDB Length = 360 Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust. Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 11/40 (27%) Query: 28 AVPYLD---KPPTPLHFYRDWVCPNRPCIIRNALQHWPAL 64 A+ YLD K T L + +DWVC N + WPA Sbjct: 255 AISYLDLPLKQKTDLEYDKDWVC--------NLIMTWPAF 286 >3ZFS-A nrPDB Length = 405 Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust. Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 8/74 (10%) Query: 85 VTPDGYADAVRGDRFMMPAERRLPLSFVLDVLEGRAQHPGVLYVQKQCSNLP-------- 136 + PD + + D +E R +V+D++ G HP + + N+ Sbjct: 113 IAPDFVPENLMADAINSVSEIRKNAQYVVDMVAGEGIHPSDVRIGGMADNITELARKRLY 172 Query: 137 SELPQLLPDLESHV 150 + L QL P + HV Sbjct: 173 ARLKQLKPKVNEHV 186 >3AZQ-A nrPDB Length = 662 Score = 27.3 bits (59), Expect = 9.3, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 23/120 (19%) Query: 140 PQLLPDLESHVPWASEALGKMPDAVNFWL------GEAAAVTSLHKDHYENLYCVVSGEK 193 P LLP+ A E G+ P V +L G AAA S ++ ++ + V+G + Sbjct: 135 PVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPR 194 Query: 194 HFLFHPPS--------DRPFIPYELYTPATYQLTEEGTFKVVD------EEAMEKVPWIP 239 P D P +P+E T ++TE+G F EEA+ + W P Sbjct: 195 ---LSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAP 251 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4QSZ-A nrPDB 522 e-149 4QU2-A nrPDB 520 e-148 5NFN-A nrPDB 518 e-148 4Z1V-A nrPDB 273 6e-74 3AL6-A nrPDB 250 7e-67 Sequences not found previously or not previously below threshold: 3W43-A nrPDB 35 0.042 2XDV-A nrPDB 34 0.097 4XE5-B nrPDB 30 1.8 2CB5-A nrPDB 29 2.7 2HOR-A nrPDB 29 2.8 3WGV-B nrPDB 29 3.1 CONVERGED! >4QSZ-A nrPDB Length = 687 Score = 522 bits (1344), Expect = e-149, Method: Composition-based stats. Identities = 276/308 (89%), Positives = 293/308 (95%) Query: 9 VRSELREFPAAARELCVPLAVPYLDKPPTPLHFYRDWVCPNRPCIIRNALQHWPALQKWS 68 VR L+EFPAAAR+L VP VPYLD+PP+PL FYRDWVCPNRPCIIRNALQHWPALQKWS Sbjct: 380 VRRALQEFPAAARDLNVPRVVPYLDEPPSPLCFYRDWVCPNRPCIIRNALQHWPALQKWS 439 Query: 69 LPYFRATVGSTEVSVAVTPDGYADAVRGDRFMMPAERRLPLSFVLDVLEGRAQHPGVLYV 128 L Y RATVGSTEVSVAVTPDGYADAVRGDRF+MPAERRLP+S VLDVLEGRAQHPGVLYV Sbjct: 440 LSYLRATVGSTEVSVAVTPDGYADAVRGDRFVMPAERRLPISHVLDVLEGRAQHPGVLYV 499 Query: 129 QKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEAAAVTSLHKDHYENLYCV 188 QKQCSNLP+ELPQLL D+ESHVPWASE+LGKMPDAVNFWLG+A+AVTSLHKDHYENLYCV Sbjct: 500 QKQCSNLPTELPQLLSDIESHVPWASESLGKMPDAVNFWLGDASAVTSLHKDHYENLYCV 559 Query: 189 VSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGTFKVVDEEAMEKVPWIPLDPLAPDLA 248 VSGEKHFL HPPSDRPFIPY LYTPATYQLTEEGTF+VVDEEAMEKVPWIPLDPLAPDL Sbjct: 560 VSGEKHFLLHPPSDRPFIPYNLYTPATYQLTEEGTFRVVDEEAMEKVPWIPLDPLAPDLT 619 Query: 249 RYPSYSQAQALRCTVRAGEMLYLPALWFHHVQQSQGCIAVNFWYDMEYDLKYSYFQLLDS 308 +YPSYSQAQAL CTVRAGEMLYLPALWFHHVQQS GCIAVNFWYDMEYDLKYSYFQL+D+ Sbjct: 620 QYPSYSQAQALHCTVRAGEMLYLPALWFHHVQQSHGCIAVNFWYDMEYDLKYSYFQLMDT 679 Query: 309 LTKASGLD 316 LT+A+GLD Sbjct: 680 LTRATGLD 687 >4QU2-A nrPDB Length = 318 Score = 520 bits (1339), Expect = e-148, Method: Composition-based stats. Identities = 284/316 (89%), Positives = 301/316 (95%) Query: 1 MAEAALEAVRSELREFPAAARELCVPLAVPYLDKPPTPLHFYRDWVCPNRPCIIRNALQH 60 MAEAALEAVR L+EFPAAAR+L VP VPYLD+PP+PL FYRDWVCPNRPCIIRNALQH Sbjct: 3 MAEAALEAVRRALQEFPAAARDLNVPRVVPYLDEPPSPLCFYRDWVCPNRPCIIRNALQH 62 Query: 61 WPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRGDRFMMPAERRLPLSFVLDVLEGRA 120 WPALQKWSL Y RATVGSTEVSVAVTPDGYADAVRGDRF+MPAERRLP+S VLDVLEGRA Sbjct: 63 WPALQKWSLSYLRATVGSTEVSVAVTPDGYADAVRGDRFVMPAERRLPISHVLDVLEGRA 122 Query: 121 QHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEAAAVTSLHKD 180 QHPGVLYVQKQCSNLP+ELPQLL D+ESHVPWASE+LGKMPDAVNFWLG+A+AVTSLHKD Sbjct: 123 QHPGVLYVQKQCSNLPTELPQLLSDIESHVPWASESLGKMPDAVNFWLGDASAVTSLHKD 182 Query: 181 HYENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGTFKVVDEEAMEKVPWIPL 240 HYENLYCVVSGEKHFL HPPSDRPFIPY LYTPATYQLTEEGTF+VVDEEAMEKVPWIPL Sbjct: 183 HYENLYCVVSGEKHFLLHPPSDRPFIPYNLYTPATYQLTEEGTFRVVDEEAMEKVPWIPL 242 Query: 241 DPLAPDLARYPSYSQAQALRCTVRAGEMLYLPALWFHHVQQSQGCIAVNFWYDMEYDLKY 300 DPLAPDL +YPSYSQAQAL CTVRAGEMLYLPALWFHHVQQS GCIAVNFWYDMEYDLKY Sbjct: 243 DPLAPDLTQYPSYSQAQALHCTVRAGEMLYLPALWFHHVQQSHGCIAVNFWYDMEYDLKY 302 Query: 301 SYFQLLDSLTKASGLD 316 SYFQL+D+LT+A+GLD Sbjct: 303 SYFQLMDTLTRATGLD 318 >5NFN-A nrPDB Length = 335 Score = 518 bits (1335), Expect = e-148, Method: Composition-based stats. Identities = 316/316 (100%), Positives = 316/316 (100%) Query: 1 MAEAALEAVRSELREFPAAARELCVPLAVPYLDKPPTPLHFYRDWVCPNRPCIIRNALQH 60 MAEAALEAVRSELREFPAAARELCVPLAVPYLDKPPTPLHFYRDWVCPNRPCIIRNALQH Sbjct: 20 MAEAALEAVRSELREFPAAARELCVPLAVPYLDKPPTPLHFYRDWVCPNRPCIIRNALQH 79 Query: 61 WPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRGDRFMMPAERRLPLSFVLDVLEGRA 120 WPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRGDRFMMPAERRLPLSFVLDVLEGRA Sbjct: 80 WPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRGDRFMMPAERRLPLSFVLDVLEGRA 139 Query: 121 QHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEAAAVTSLHKD 180 QHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEAAAVTSLHKD Sbjct: 140 QHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEAAAVTSLHKD 199 Query: 181 HYENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGTFKVVDEEAMEKVPWIPL 240 HYENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGTFKVVDEEAMEKVPWIPL Sbjct: 200 HYENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGTFKVVDEEAMEKVPWIPL 259 Query: 241 DPLAPDLARYPSYSQAQALRCTVRAGEMLYLPALWFHHVQQSQGCIAVNFWYDMEYDLKY 300 DPLAPDLARYPSYSQAQALRCTVRAGEMLYLPALWFHHVQQSQGCIAVNFWYDMEYDLKY Sbjct: 260 DPLAPDLARYPSYSQAQALRCTVRAGEMLYLPALWFHHVQQSQGCIAVNFWYDMEYDLKY 319 Query: 301 SYFQLLDSLTKASGLD 316 SYFQLLDSLTKASGLD Sbjct: 320 SYFQLLDSLTKASGLD 335 >4Z1V-A nrPDB Length = 352 Score = 273 bits (698), Expect = 6e-74, Method: Composition-based stats. Identities = 64/276 (23%), Positives = 106/276 (38%), Gaps = 48/276 (17%) Query: 49 NRPCIIRNALQHWPALQKWSLPYFRATVGSTEVSVAVTPDG---YADAVRGDRF--MMPA 103 P ++ + +PAL KW L Y + +G+ + SV Y D + F P Sbjct: 62 EEPVVLTDTNLVYPAL-KWDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQNFKPR 120 Query: 104 ERRLPLSF--VLDVLEGRAQHPG--VLYVQKQCSNLPSELPQLLPDL-ESHVPWASEALG 158 R + F ++ L+ Q G LY+Q+ ++ +++ D + W ++ G Sbjct: 121 SNREEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGR--KIVMDFLGFNWNWINKQQG 178 Query: 159 KMP----DAVNFWLGEAAAVTSLHKDHYENLYCVVSGEKHFLFHPPSD-RPFIPYELYTP 213 K + +G VT H D +N + + G K + PP PY ++ P Sbjct: 179 KRGWGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHP 238 Query: 214 ATYQLTEEGTFKVVDEEAMEKVPWIPLDPLAPDLARYPSYSQAQALRCTVRAGEMLYLPA 273 Q +D PD R+P++ V G++LY+P Sbjct: 239 CDRQSQ--------------------VDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPM 278 Query: 274 LWFHHVQ---QSQGCIAVNFWYD-------MEYDLK 299 W+HH++ I VNFWY +EY LK Sbjct: 279 YWWHHIESLLNGGITITVNFWYKGAPTPKRIEYPLK 314 >3AL6-A nrPDB Length = 338 Score = 250 bits (638), Expect = 7e-67, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 97/261 (37%), Gaps = 52/261 (19%) Query: 48 PNRPCIIRNALQHWPALQKWSLPYFRATVGSTEVSVAVTPDGYADAVRG---------DR 98 P R ++ + P KW++ Y G EV + V D + D+ Sbjct: 48 PQRKPLVLEGIDLGPCTSKWTVDYLSQVGGKKEVKIHVAAVAQMDFISKNFVYRTLPFDQ 107 Query: 99 FMMPAERRLPLSFVLDVLE-------GRAQHPGVLYVQKQCSNLPSELPQLLPDLESHVP 151 + A F + E G V ++KQ L ++ P+ Sbjct: 108 LVQRAAEEKHKEFFVSEDEKYYLRSLGEDPRKDVADIRKQFPLLKGDIK--FPEFFKEEQ 165 Query: 152 WASEALGKMPDAVNFWLGEAAAVTSLHKDHYENLYCVVSGEKHFLFHPPSDRPFIPYELY 211 + S + W H D +NL V+G+K + P D + LY Sbjct: 166 FFSSVFRISSPGLQLWT---------HYDVMDNLLIQVTGKKRVVLFSPRDAQY----LY 212 Query: 212 TPATYQLTEEGTFKVVDEEAMEKVPWIPLDPLAPDLARYPSYSQAQALRCTVRAGEMLYL 271 T K + +D PDLA+YP +S+A+ C++ AG++L++ Sbjct: 213 LKGT------------------KSEVLNID--NPDLAKYPLFSKARRYECSLEAGDVLFI 252 Query: 272 PALWFHHVQQSQGCIAVN-FW 291 PALWFH+V + + VN FW Sbjct: 253 PALWFHNVISEEFGVGVNIFW 273 >3W43-A nrPDB Length = 199 Score = 35.1 bits (79), Expect = 0.042, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 11/111 (9%) Query: 169 GEAAAVTSLHKDHYENLYCVVSGEKHFLFHPPSDRPFIPYELYTPATYQLTEEGTFKVVD 228 G A++ ++ + + YC V G F+ H PS F P + + + + T Sbjct: 87 GATASILKINFEQRQFTYCSV-GNVRFILHSPSGESFYPLPISGYLSGKPQKYKTHTATY 145 Query: 229 EEAMEKVPWIPLDPLA-PDLARY-------PSYSQAQALRCTVRAGEMLYL 271 E+ + + I D L PD+ + S + + T R ++ Y+ Sbjct: 146 EKGSKFI--IHTDGLNVPDIRSHLKKGQSVEEISNSLKMYTTSRKDDLTYI 194 >2XDV-A nrPDB Length = 442 Score = 34.0 bits (76), Expect = 0.097, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 5/81 (6%) Query: 126 LYVQKQCSNLPSELPQLLPDLESHVPWASEA-----LGKMPDAVNFWLGEAAAVTSLHKD 180 L ++K + + P W + G + + + + H D Sbjct: 99 LQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHYD 158 Query: 181 HYENLYCVVSGEKHFLFHPPS 201 E + GEKH+ + P+ Sbjct: 159 DVEVFILQLEGEKHWRLYHPT 179 >4XE5-B nrPDB Length = 303 Score = 29.7 bits (65), Expect = 1.8, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 55/151 (36%), Gaps = 17/151 (11%) Query: 112 VLDVLEGRAQHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEA 171 L AQ +++ + C N+PSEL +L + + K+ WLG Sbjct: 108 FLKKYRDSAQKDDMIF--EDCGNVPSELKDR-GELNNE-----QGERKVCRFKLEWLGNC 159 Query: 172 AAVTSLHKDHYENLYCVVSGEKHFLFH---PPSDRPFIPYEL--YTPATYQLTEEGTFKV 226 + + + + CV+ L PP + Y + Y P + G + Sbjct: 160 SGINDETYGYKDGKPCVIIKLNRVLGFKPKPPKNESLETYPVMKYNPYVLPVQCTGK-RD 218 Query: 227 VDEEAMEKVPWIPLD--PLAPDLARYPSYSQ 255 D+E + + + L P P L YP Y + Sbjct: 219 EDKEKVGSIEYFGLGGYPGFP-LQYYPYYGK 248 >2CB5-A nrPDB Length = 453 Score = 29.0 bits (63), Expect = 2.7, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 5/48 (10%) Query: 35 PPTPLHFYRDWVCP-----NRPCIIRNALQHWPALQKWSLPYFRATVG 77 P TPL FYR+ V P ++ C++ + + +++ Y VG Sbjct: 246 PITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTVEYLSNMVG 293 >2HOR-A nrPDB Length = 427 Score = 29.0 bits (63), Expect = 2.8, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Query: 254 SQAQALRCTVRAGEMLYLPALWFHHVQQSQGCIAVNFWYDMEY 296 + Q V +G+ L+L W H + S + V+ W+ M Y Sbjct: 52 EKIQGCSADVASGDGLFLEEYWKQHKEAS--AVLVSPWHRMSY 92 >3WGV-B nrPDB Length = 303 Score = 29.0 bits (63), Expect = 3.1, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 53/150 (35%), Gaps = 15/150 (10%) Query: 112 VLDVLEGRAQHPGVLYVQKQCSNLPSELPQLLPDLESHVPWASEALGKMPDAVNFWLGEA 171 L+ + AQ +++ + C N+PSEL E K+ WLG Sbjct: 108 FLEKYKDLAQKDDMIF--EDCGNVPSELK------ERGEYNNERGERKVCRFRLEWLGNC 159 Query: 172 AAVTSLHKDHYENLYCVVSGEKHFLFH---PPSDRPFIPYELYTPATYQLTEEGT-FKVV 227 + + + + CV+ L PP + Y + Y L T + Sbjct: 160 SGLNDETYGYKDGKPCVIIKLNRVLGFKPKPPKNESLETYPVMKYNPYVLPVHCTGKRDE 219 Query: 228 DEEAMEKVPWIPLD--PLAPDLARYPSYSQ 255 D+E + + + L P P L YP Y + Sbjct: 220 DKEKVGTMEYFGLGGYPGFP-LQYYPYYGK 248 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.125 0.356 Lambda K H 0.267 0.0379 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,016,515 Number of Sequences: 36641 Number of extensions: 463036 Number of successful extensions: 1151 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 1122 Number of HSP's gapped (non-prelim): 29 length of query: 316 length of database: 10,336,785 effective HSP length: 97 effective length of query: 219 effective length of database: 6,782,608 effective search space: 1485391152 effective search space used: 1485391152 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 59 (27.4 bits)