BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P0C024 (238 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5T3P-A nrPDB 484 e-137 5QHA-A nrPDB 406 e-114 6OIK-A nrPDB 32 0.25 6G79-A nrPDB 32 0.34 4B7G-A nrPDB 31 0.37 4IJX-A nrPDB 29 1.8 3A6V-A nrPDB 28 4.8 4M60-A nrPDB 27 6.3 1TAG-A nrPDB 27 7.2 2R8K-A nrPDB 27 9.5 >5T3P-A nrPDB Length = 236 Score = 484 bits (1247), Expect = e-137, Method: Compositional matrix adjust. Identities = 235/235 (100%), Positives = 235/235 (100%) Query: 1 MSRLGLPEEPVRNSLLDDAKARLRKYDIGGKYSHLPYNKYSVLLPLVAKEGKLHLLFTVR 60 MSRLGLPEEPVRNSLLDDAKARLRKYDIGGKYSHLPYNKYSVLLPLVAKEGKLHLLFTVR Sbjct: 2 MSRLGLPEEPVRNSLLDDAKARLRKYDIGGKYSHLPYNKYSVLLPLVAKEGKLHLLFTVR 61 Query: 61 SEKLRRAPGEVCFPGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTDTL 120 SEKLRRAPGEVCFPGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTDTL Sbjct: 62 SEKLRRAPGEVCFPGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTDTL 121 Query: 121 ITPFVGLIDHNFQAQPNPAEVKDVFLVPLAYFLHPQVHDQHYVTRLGHRFINHIFEYTNP 180 ITPFVGLIDHNFQAQPNPAEVKDVFLVPLAYFLHPQVHDQHYVTRLGHRFINHIFEYTNP Sbjct: 122 ITPFVGLIDHNFQAQPNPAEVKDVFLVPLAYFLHPQVHDQHYVTRLGHRFINHIFEYTNP 181 Query: 181 EDGVTYQIKGMTANLAVLVAFIILEKKPTFEVQFNLNDVLASSEELFLKVHKKAT 235 EDGVTYQIKGMTANLAVLVAFIILEKKPTFEVQFNLNDVLASSEELFLKVHKKAT Sbjct: 182 EDGVTYQIKGMTANLAVLVAFIILEKKPTFEVQFNLNDVLASSEELFLKVHKKAT 236 >5QHA-A nrPDB Length = 196 Score = 406 bits (1043), Expect = e-114, Method: Compositional matrix adjust. Identities = 195/196 (99%), Positives = 196/196 (100%) Query: 14 SLLDDAKARLRKYDIGGKYSHLPYNKYSVLLPLVAKEGKLHLLFTVRSEKLRRAPGEVCF 73 S+LDDAKARLRKYDIGGKYSHLPYNKYSVLLPLVAKEGKLHLLFTVRSEKLRRAPGEVCF Sbjct: 1 SMLDDAKARLRKYDIGGKYSHLPYNKYSVLLPLVAKEGKLHLLFTVRSEKLRRAPGEVCF 60 Query: 74 PGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTDTLITPFVGLIDHNFQ 133 PGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTDTLITPFVGLIDHNFQ Sbjct: 61 PGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTDTLITPFVGLIDHNFQ 120 Query: 134 AQPNPAEVKDVFLVPLAYFLHPQVHDQHYVTRLGHRFINHIFEYTNPEDGVTYQIKGMTA 193 AQPNPAEVKDVFLVPLAYFLHPQVHDQHYVTRLGHRFINHIFEYTNPEDGVTYQIKGMTA Sbjct: 121 AQPNPAEVKDVFLVPLAYFLHPQVHDQHYVTRLGHRFINHIFEYTNPEDGVTYQIKGMTA 180 Query: 194 NLAVLVAFIILEKKPT 209 NLAVLVAFIILEKKPT Sbjct: 181 NLAVLVAFIILEKKPT 196 >6OIK-A nrPDB Length = 354 Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%) Query: 62 EKLRRAPGEVCFPGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTDTLI 121 EK++++P +CFP P +DAA A +AQ E R E+ C + C DT+ + Sbjct: 277 EKIKKSPLTICFP-EYTGPNTYEDAA-AYIQAQFESKNRSPNKEIYCHMT-CATDTNNIQ 333 Query: 122 TPFVGLID 129 F + D Sbjct: 334 VVFDAVTD 341 >6G79-A nrPDB Length = 225 Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Query: 62 EKLRRAPGEVCFPGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTDTLI 121 EK++++P +CFP P +DAA A +AQ E R E+ C + C DT+ Sbjct: 148 EKIKKSPLTICFP-EYTGPNTYEDAA-AYIQAQFESKNRSPNKEIYCHMT-CATDTNNAQ 204 Query: 122 TPFVGLID 129 F + D Sbjct: 205 VIFDAVTD 212 >4B7G-A nrPDB Length = 515 Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 3/109 (2%) Query: 19 AKARLRKYDIGGKYSHLPYNKYSVLLPLVAKEGKLHLLFTVRSEKLRRAPGEVCFPGGKR 78 A A ++Y IG Y LP N+ + ++EG + +F E +P G Sbjct: 351 AYADQQRYRIGANYRDLPVNRPINEVNTYSREGSMQYIFDAEGEP-SYSPNRYDKGAGYL 409 Query: 79 D-PTDMDDAATALREAQE-EVGLRPHQVEVVCCLVPCLIDTDTLITPFV 125 D TD T+ +A + V PH ++V D D I P + Sbjct: 410 DNGTDSSSNHTSYGQADDIYVNPDPHGTDLVRAAYVKHQDDDDFIQPGI 458 >4IJX-A nrPDB Length = 155 Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust. Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Query: 74 PGGKRDPTDMDDAATALREAQEEVGLRPHQVEVV 107 P G +P + DD TALR QEE G+ Q+ ++ Sbjct: 41 PKGHVEPGE-DDLETALRATQEEAGIEAGQLTII 73 >3A6V-A nrPDB Length = 129 Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 56 LFTVRSEKLRRAPGEVCFPGGKRDPTDMDDAATALREAQEEVGLRPH 102 +F R ++ FPGGK + + + A +RE QEEVG+ P Sbjct: 18 IFITRRAADAHMANKLEFPGGKIEMGETPEQAV-VRELQEEVGITPQ 63 >4M60-A nrPDB Length = 418 Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 61 SEKLRRAPGEVCFPGGKRDPTDMDDAATALR-EAQEEVGLRPH 102 + +LRR E+ GG R D+ +A R E QE VG RP+ Sbjct: 374 ARRLRRIQAEMAQEGGTRRAADLIEAELPARHERQEPVGDRPN 416 >1TAG-A nrPDB Length = 324 Score = 26.9 bits (58), Expect = 7.2, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 10/97 (10%) Query: 33 SHLPYNKYSVLLPLVAKEGKLHLLFTVRSEKLRRAPGEVCFPGGKRDPTDMDDAATALRE 92 +H + S++L L K+ V SEK+++A +CFP P +DA ++ Sbjct: 225 NHRYFATTSIVLFLNKKD--------VFSEKIKKAHLSICFP-DYNGPNTYEDAGNYIKV 275 Query: 93 AQEEVGLRPHQVEVVCCLVPCLIDTDTLITPFVGLID 129 E+ +R V+ + + C DT + F + D Sbjct: 276 QFLELNMR-RDVKEIYSHMTCATDTQNVKFVFDAVTD 311 >2R8K-A nrPDB Length = 554 Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 24/101 (23%) Query: 16 LDDAKARLRKYDIGGKY---SHLPYNKYSVLLPLVAKEGKLHLLFTVRSEKLRRAPGEVC 72 L DA + +R+ IGG Y SHLP L+P K K G+V Sbjct: 206 LKDALSNIREAFIGGNYDINSHLP------LIPEKIKSLKFE--------------GDVF 245 Query: 73 FPGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPC 113 P G+ TD DD AL +Q G+R +++ C Sbjct: 246 NPEGRDLITDWDDVILAL-GSQVCKGIRDSIKDILGYTTSC 285 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5T3P-A nrPDB 486 e-138 5QHA-A nrPDB 410 e-115 Sequences not found previously or not previously below threshold: 6OIK-A nrPDB 33 0.095 6G79-A nrPDB 32 0.26 4IJX-A nrPDB 30 0.69 4M60-A nrPDB 30 0.97 3A6V-A nrPDB 30 1.1 2DDM-A nrPDB 29 1.8 6DBW-B nrPDB 28 4.7 5LOU-A nrPDB 28 5.1 1TAG-A nrPDB 27 5.7 2MZB-A nrPDB 27 5.9 6ET3-B nrPDB 27 6.2 3SS6-A nrPDB 27 7.4 5HWE-A nrPDB 27 7.6 1P2F-A nrPDB 27 9.2 CONVERGED! >5T3P-A nrPDB Length = 236 Score = 486 bits (1251), Expect = e-138, Method: Composition-based stats. Identities = 235/235 (100%), Positives = 235/235 (100%) Query: 1 MSRLGLPEEPVRNSLLDDAKARLRKYDIGGKYSHLPYNKYSVLLPLVAKEGKLHLLFTVR 60 MSRLGLPEEPVRNSLLDDAKARLRKYDIGGKYSHLPYNKYSVLLPLVAKEGKLHLLFTVR Sbjct: 2 MSRLGLPEEPVRNSLLDDAKARLRKYDIGGKYSHLPYNKYSVLLPLVAKEGKLHLLFTVR 61 Query: 61 SEKLRRAPGEVCFPGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTDTL 120 SEKLRRAPGEVCFPGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTDTL Sbjct: 62 SEKLRRAPGEVCFPGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTDTL 121 Query: 121 ITPFVGLIDHNFQAQPNPAEVKDVFLVPLAYFLHPQVHDQHYVTRLGHRFINHIFEYTNP 180 ITPFVGLIDHNFQAQPNPAEVKDVFLVPLAYFLHPQVHDQHYVTRLGHRFINHIFEYTNP Sbjct: 122 ITPFVGLIDHNFQAQPNPAEVKDVFLVPLAYFLHPQVHDQHYVTRLGHRFINHIFEYTNP 181 Query: 181 EDGVTYQIKGMTANLAVLVAFIILEKKPTFEVQFNLNDVLASSEELFLKVHKKAT 235 EDGVTYQIKGMTANLAVLVAFIILEKKPTFEVQFNLNDVLASSEELFLKVHKKAT Sbjct: 182 EDGVTYQIKGMTANLAVLVAFIILEKKPTFEVQFNLNDVLASSEELFLKVHKKAT 236 >5QHA-A nrPDB Length = 196 Score = 410 bits (1054), Expect = e-115, Method: Composition-based stats. Identities = 195/196 (99%), Positives = 196/196 (100%) Query: 14 SLLDDAKARLRKYDIGGKYSHLPYNKYSVLLPLVAKEGKLHLLFTVRSEKLRRAPGEVCF 73 S+LDDAKARLRKYDIGGKYSHLPYNKYSVLLPLVAKEGKLHLLFTVRSEKLRRAPGEVCF Sbjct: 1 SMLDDAKARLRKYDIGGKYSHLPYNKYSVLLPLVAKEGKLHLLFTVRSEKLRRAPGEVCF 60 Query: 74 PGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTDTLITPFVGLIDHNFQ 133 PGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTDTLITPFVGLIDHNFQ Sbjct: 61 PGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTDTLITPFVGLIDHNFQ 120 Query: 134 AQPNPAEVKDVFLVPLAYFLHPQVHDQHYVTRLGHRFINHIFEYTNPEDGVTYQIKGMTA 193 AQPNPAEVKDVFLVPLAYFLHPQVHDQHYVTRLGHRFINHIFEYTNPEDGVTYQIKGMTA Sbjct: 121 AQPNPAEVKDVFLVPLAYFLHPQVHDQHYVTRLGHRFINHIFEYTNPEDGVTYQIKGMTA 180 Query: 194 NLAVLVAFIILEKKPT 209 NLAVLVAFIILEKKPT Sbjct: 181 NLAVLVAFIILEKKPT 196 >6OIK-A nrPDB Length = 354 Score = 33.4 bits (75), Expect = 0.095, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%) Query: 62 EKLRRAPGEVCFPGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTDTLI 121 EK++++P +CFP P +DAA A +AQ E R E+ C + C DT+ + Sbjct: 277 EKIKKSPLTICFP-EYTGPNTYEDAA-AYIQAQFESKNRSPNKEIYCHMT-CATDTNNIQ 333 Query: 122 TPFVGLID 129 F + D Sbjct: 334 VVFDAVTD 341 >6G79-A nrPDB Length = 225 Score = 31.9 bits (71), Expect = 0.26, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Query: 62 EKLRRAPGEVCFPGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTDTLI 121 EK++++P +CFP P +DAA A +AQ E R E+ C + C DT+ Sbjct: 148 EKIKKSPLTICFP-EYTGPNTYEDAA-AYIQAQFESKNRSPNKEIYCHMT-CATDTNNAQ 204 Query: 122 TPFVGLID 129 F + D Sbjct: 205 VIFDAVTD 212 >4IJX-A nrPDB Length = 155 Score = 30.3 bits (67), Expect = 0.69, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Query: 74 PGGKRDPTDMDDAATALREAQEEVGLRPHQVEVV 107 P G +P + DD TALR QEE G+ Q+ ++ Sbjct: 41 PKGHVEPGE-DDLETALRATQEEAGIEAGQLTII 73 >4M60-A nrPDB Length = 418 Score = 29.9 bits (66), Expect = 0.97, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%) Query: 61 SEKLRRAPGEVCFPGGKRDPTDMDDAATALR-EAQEEVGLRPH 102 + +LRR E+ GG R D+ +A R E QE VG RP+ Sbjct: 374 ARRLRRIQAEMAQEGGTRRAADLIEAELPARHERQEPVGDRPN 416 >3A6V-A nrPDB Length = 129 Score = 29.5 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 56 LFTVRSEKLRRAPGEVCFPGGKRDPTDMDDAATALREAQEEVGLRPHQ 103 +F R ++ FPGGK + + + A +RE QEEVG+ P Sbjct: 18 IFITRRAADAHMANKLEFPGGKIEMGETPEQAV-VRELQEEVGITPQH 64 >2DDM-A nrPDB Length = 283 Score = 29.2 bits (64), Expect = 1.8, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 23/168 (13%) Query: 15 LLDDAKARLRKYDIGGKYSHLPYNKY--SVLLPLVAKEGKLHLLFTVRSEKLRRAPGEVC 72 LL + K+R + DI S + Y S+ +P + + G L++ F V + L P Sbjct: 5 LLFNDKSRALQADIVAVQSQVVYGSVGNSIAVPAIKQNG-LNV-FAVPTVLLSNTPHYDT 62 Query: 73 FPGGKRDPTDMDDAATALREAQEEVGLR------------PHQVEVVCCLVPCL----ID 116 F GG P + + LR QE LR Q++++ + L D Sbjct: 63 FYGGAI-PDEW--FSGYLRALQERDALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPD 119 Query: 117 TDTLITPFVGLIDHNFQAQPNPAEVKDVFLVPLAYFLHPQVHDQHYVT 164 ++ P +G ID +P+ E +L+PLA + P + + +T Sbjct: 120 LLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILT 167 >6DBW-B nrPDB Length = 533 Score = 27.6 bits (60), Expect = 4.7, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 19/37 (51%) Query: 69 GEVCFPGGKRDPTDMDDAATALREAQEEVGLRPHQVE 105 GE GG ++ TD +D+A + G PH++E Sbjct: 359 GEATAQGGSQESTDFEDSAPLEDSEELYFGREPHELE 395 >5LOU-A nrPDB Length = 330 Score = 27.6 bits (60), Expect = 5.1, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 16/26 (61%) Query: 55 LLFTVRSEKLRRAPGEVCFPGGKRDP 80 L+F RS ++ APG V PGG +P Sbjct: 161 LVFLRRSRQVAEAPGLVDVPGGHPEP 186 >1TAG-A nrPDB Length = 324 Score = 27.2 bits (59), Expect = 5.7, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 2/71 (2%) Query: 59 VRSEKLRRAPGEVCFPGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTD 118 V SEK+++A +CFP P +DA ++ E+ +R V+ + + C DT Sbjct: 243 VFSEKIKKAHLSICFP-DYNGPNTYEDAGNYIKVQFLELNMR-RDVKEIYSHMTCATDTQ 300 Query: 119 TLITPFVGLID 129 + F + D Sbjct: 301 NVKFVFDAVTD 311 >2MZB-A nrPDB Length = 196 Score = 27.2 bits (59), Expect = 5.9, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 7/67 (10%) Query: 149 LAYFLHPQVHDQHYVTRLGHRFINHIFEYTNPEDGVTYQIKGMTANLAVLVAFIILEKKP 208 + YF P + + L + IN I +Y Y IK T ++ L I EK P Sbjct: 88 IGYFSEPFLVVSSDLINLKSKIINSIVDYF-------YCIKAKTPDVEALAVMIPKEKYP 140 Query: 209 TFEVQFN 215 + FN Sbjct: 141 NPSIDFN 147 >6ET3-B nrPDB Length = 283 Score = 27.2 bits (59), Expect = 6.2, Method: Composition-based stats. Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 19/111 (17%) Query: 68 PGEVCFPG---GKR-----DPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPC---LID 116 P VC G G+R D M A+REA +E ++P +++++ L LI+ Sbjct: 12 PSYVCLEGPLGGERPRAQGDEMLMQRLLPAVREALDEAAVKPEEIDLIVGLALSPDHLIE 71 Query: 117 TDTLITPFVGLIDHNFQA--QPNPAEVKDVFLVPLA---YFLHPQVHDQHY 162 ++ P +G H Q N A V D+ LA Y + DQ Y Sbjct: 72 NRDIMAPKIG---HPLQKVLGANRAHVFDLTDSSLARALYVVDTLASDQGY 119 >3SS6-A nrPDB Length = 394 Score = 26.8 bits (58), Expect = 7.4, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Query: 73 FPGGKRDPTDMDDAATALREAQEEVGLRPHQVEVVCCLVPCLIDTD 118 F G ++ T ++ A L+EA + G+ PH+V+ V L C+ TD Sbjct: 20 FGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEV-ILGHCIQRTD 64 >5HWE-A nrPDB Length = 389 Score = 26.8 bits (58), Expect = 7.6, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 17/29 (58%) Query: 78 RDPTDMDDAATALREAQEEVGLRPHQVEV 106 +DP D D A+R+A E+ RPH ++ Sbjct: 281 KDPLDQDGIWAAIRDAGLELPERPHSSDL 309 >1P2F-A nrPDB Length = 220 Score = 26.8 bits (58), Expect = 9.2, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 10/78 (12%) Query: 30 GKYSHLPYNKYSVLLPLVAKEGKLHLLFTVRSEKLRRAPGEVCFPGGKRDPTDMDDAATA 89 GK HLP ++ +LL L GK+ V EKL F P +D Sbjct: 141 GKRIHLPKKEFEILLFLAENAGKV-----VTREKLLET-----FWEDPVSPRVVDTVIKR 190 Query: 90 LREAQEEVGLRPHQVEVV 107 +R+A E+ RP ++ + Sbjct: 191 IRKAIEDDPNRPRYIKTI 208 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.316 0.144 0.451 Lambda K H 0.267 0.0441 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,098,006 Number of Sequences: 36641 Number of extensions: 522267 Number of successful extensions: 1055 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 1041 Number of HSP's gapped (non-prelim): 32 length of query: 238 length of database: 10,336,785 effective HSP length: 94 effective length of query: 144 effective length of database: 6,892,531 effective search space: 992524464 effective search space used: 992524464 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 58 (26.8 bits)