BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P0AG16 (505 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1ECF-A nrPDB 1038 0.0 1AO0-A nrPDB 321 4e-88 4AMV-A nrPDB 72 8e-13 1O5O-A nrPDB 35 0.064 3NAG-A nrPDB 35 0.091 1VDM-A nrPDB 34 0.15 1U9Y-A nrPDB 34 0.15 5IPF-A nrPDB 32 0.55 4PFQ-A nrPDB 32 0.79 1Q7Q-A nrPDB 32 0.81 5DM6-0 nrPDB 31 0.99 2ZJO-A nrPDB 31 1.2 1IOO-A nrPDB 30 1.8 4S2R-P nrPDB 30 2.6 2IL3-A nrPDB 30 2.6 4B6E-A nrPDB 30 2.7 5T3O-A nrPDB 30 2.9 4OK6-A nrPDB 30 2.9 1QK4-A nrPDB 30 3.5 5MP7-A nrPDB 29 4.2 5HIA-A nrPDB 29 4.2 6E7Z-A nrPDB 29 5.3 1WD5-A nrPDB 28 6.8 2WNW-A nrPDB 28 9.0 2VFA-A nrPDB 28 9.9 >1ECF-A nrPDB Length = 504 Score = 1038 bits (2685), Expect = 0.0, Method: Compositional matrix adjust. Identities = 504/504 (100%), Positives = 504/504 (100%) Query: 2 CGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARHM 61 CGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARHM Sbjct: 1 CGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARHM 60 Query: 62 QRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKRR 121 QRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKRR Sbjct: 61 QRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKRR 120 Query: 122 HINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMVA 181 HINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMVA Sbjct: 121 HINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMVA 180 Query: 182 FRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFT 241 FRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFT Sbjct: 181 FRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFT 240 Query: 242 RQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVIP 301 RQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVIP Sbjct: 241 RQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVIP 300 Query: 302 IPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDK 361 IPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDK Sbjct: 301 IPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDK 360 Query: 362 NVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAHGR 421 NVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAHGR Sbjct: 361 NVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAHGR 420 Query: 422 EVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFECSVFNGVYVTKDVDQGYLDFLDT 481 EVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFECSVFNGVYVTKDVDQGYLDFLDT Sbjct: 421 EVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFECSVFNGVYVTKDVDQGYLDFLDT 480 Query: 482 LRNDDAKAVQRQNEVENLEMHNEG 505 LRNDDAKAVQRQNEVENLEMHNEG Sbjct: 481 LRNDDAKAVQRQNEVENLEMHNEG 504 >1AO0-A nrPDB Length = 459 Score = 321 bits (823), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 191/471 (40%), Positives = 272/471 (57%), Gaps = 26/471 (5%) Query: 2 CGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARHM 61 CG+ GI G Q Y L LQHRGQ+ AGI+ D K GL+++VF+ + Sbjct: 1 CGVFGIWGHEEAPQITYYGLHSLQHRGQEGAGIVATDGEK-LTAHKGQGLITEVFQNGEL 59 Query: 62 QRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPY--GITLAHNGNLTNAHELRKKLFEEK 119 +++G IGHVRY TAG QP S + LAHNGNL NA +L+++L E + Sbjct: 60 SKVKGKGAIGHVRYATAGGGGYENVQPLLFRSQNNGSLALAHNGNLVNATQLKQQL-ENQ 118 Query: 120 RRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGM 179 T+SD+E+L ++ + H+ L+ D I +++ +++GAYA + M + Sbjct: 119 GSIFQTSSDTEVLAHL----IKRSGHFTLK-DQIKNSLS----MLKGAYAFLIMTETEMI 169 Query: 180 VAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQL 239 VA DPNG+RPL +G Y+VASE+ A D +G +LR+V PGE + I +EG + Sbjct: 170 VAL-DPNGLRPLSIGMMG-----DAYVVASETCAFDVVGATYLREVEPGEMLIINDEG-M 222 Query: 240 FTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVV 299 + + + N + C EY+YF+RPDS ID I+V+SAR N+G L ++ A ++ DVV Sbjct: 223 KSERFSMNINRSICSMEYIYFSRPDSNIDGINVHSARKNLGKMLAQESA-----VEADVV 277 Query: 300 IPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFR 359 +P++S A+ A G PY G +KNRYVGRTFI P Q LR + VR KL+A R Sbjct: 278 TGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQALREQGVRMKLSAVRGVVE 337 Query: 360 DKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAH 419 K V++VDDSIVRGTTS +I+ M REAGA +V++ ++P I P YGID + ELIA Sbjct: 338 GKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISSPPIAHPCFYGIDTSTHEELIAS 397 Query: 420 GREVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFEC-SVFNGVYVTK 469 V+EIRQ IGAD L F + L+ + + D +C + F G Y T+ Sbjct: 398 SHSVEEIRQEIGADTLSFLSVEGLLKGIGRKYDDSNCGQCLACFTGKYPTE 448 >4AMV-A nrPDB Length = 609 Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 19/215 (8%) Query: 1 MCGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDA-NNCFRLRKANGLVSDVFEAR 59 MCGIVG V + + + L L++RG D+AG+ +DA + RLR+ G V + +A Sbjct: 1 MCGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRL-GKVQMLAQAA 59 Query: 60 HMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEK 119 L G GI H R+ T G S A P I + HNG + N LR++L Sbjct: 60 EEHPLHGGTGIAHTRWATHGEPSEVNAHPHVSEH---IVVVHNGIIENHEPLREELKARG 116 Query: 120 RRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGM 179 ++ T D+E++ ++ EL + + A+ +RGAY V M H Sbjct: 117 YTFVSET-DTEVIAHLVNWELK-------QGGTLREAVLRAIPQLRGAYGTVIMDSRHPD 168 Query: 180 VAFRDPNGIRPLVLGKRDIDENRTEYMVASESVAL 214 +G PLV+G E +AS+ +AL Sbjct: 169 TLLAARSG-SPLVIGL-----GMGENFIASDQLAL 197 >1O5O-A nrPDB Length = 221 Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust. Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 2/42 (4%) Query: 360 DKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLAS--AAPE 399 DK V L+D + G +S + IE+ +E GAKK+ L + AAPE Sbjct: 136 DKEVFLLDPMLATGVSSIKAIEILKENGAKKITLVALIAAPE 177 >3NAG-A nrPDB Length = 286 Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust. Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 20/153 (13%) Query: 248 PVSNPCLFE-YVYFARPDSFID----KISVYSARVNMGTKLGEKIAREWEDLDIDVVIPI 302 P+S+ L E Y ++ + +D K YS + I R ++++D+D V+ Sbjct: 101 PISSQILTEIYSSYSNSIATVDIHDEKTLSYSKVKFSDLHANDAIVRYYKNVDVDYVVSP 160 Query: 303 PETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDKN 362 + +I+ LGK + F + +++ ++V K+ + K Sbjct: 161 DDGGLARVADISAKLGKKH-------------FFIEKKRIDDRTVEMKVP--NVDVNGKK 205 Query: 363 VLLVDDSIVRGTTSEQIIEMAREAGAKKVYLAS 395 +L+VDD I G T + + RE GA K+Y+++ Sbjct: 206 LLIVDDIISTGGTIAKSSGLLREKGASKIYVSA 238 >1VDM-A nrPDB Length = 153 Score = 34.3 bits (77), Expect = 0.15, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 26/42 (61%) Query: 356 AEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAA 397 + +DK V++VDD G T E +IE ++ GAK++ +A A Sbjct: 79 GDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLA 120 >1U9Y-A nrPDB Length = 284 Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust. Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 13/90 (14%) Query: 310 ALEIARILGKPYRQGFVKNRYVGRTFIMPGQ-QLRRKSVRRKLNANRAEFRDKNVLLVDD 368 ALE A+ K + Y+ +T + P + Q+ K++ + +D++V +VDD Sbjct: 166 ALEFAKTASKILNAEY---DYLEKTRLSPTEIQIAPKTL---------DAKDRDVFIVDD 213 Query: 369 SIVRGTTSEQIIEMAREAGAKKVYLASAAP 398 I G T +++ +E GAKK+ A P Sbjct: 214 IISTGGTMATAVKLLKEQGAKKIIAACVHP 243 >5IPF-A nrPDB Length = 250 Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 6/63 (9%) Query: 356 AEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLAS-----AAPEIRF-PNVYGID 409 +E++DKNVL+V+D I G T ++I K V +AS +P + P+ G + Sbjct: 148 SEYKDKNVLVVEDIIDTGKTITKLISHLDSLSTKSVKVASLLVKRTSPRNDYRPDFVGFE 207 Query: 410 MPS 412 +P+ Sbjct: 208 VPN 210 >4PFQ-A nrPDB Length = 207 Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Query: 339 GQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAP 398 G + V R L + D+NVL+V+D I G T + ++ R G K V +A+ Sbjct: 98 GSGTKSSGVVRILKDLSGDITDRNVLIVEDIIDSGLTLKWLLSNLRSRGPKSVEVAAL-- 155 Query: 399 EIRFPNVYGIDM 410 +R P+ +D+ Sbjct: 156 -LRKPDAARVDI 166 >1Q7Q-A nrPDB Length = 566 Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust. Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 10/115 (8%) Query: 331 VGRTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKK 390 V R++I G + + A R + R + D IVR + +AR A +K Sbjct: 49 VHRSYIESGSDV---ILTNTFGATRMKLRKHGLEDKLDPIVRNA-----VRIARRAAGEK 100 Query: 391 VYLASAAPEIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLID 445 + P P Y + E + RE EI G DG+IF+ +D+++ Sbjct: 101 LVFGDIGPTGELP--YPLGSTLFEEFYENFRETVEIMVEEGVDGIIFETFSDILE 153 >5DM6-0 nrPDB Length = 224 Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust. Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 22/123 (17%) Query: 285 EKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRR 344 E+IA + +D D V+ P+ I ++AR+LG +G + N G G + Sbjct: 97 ERIAGGF--MDFDAVVATPDMMAQIGQKLARLLGP---RGLLPNPKSGTV----GADV-- 145 Query: 345 KSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSE-----------QIIEMAREAGAKKVYL 393 + R L A R EFR+ +V I + + +E A+ AK V+L Sbjct: 146 AGMVRGLKAGRIEFRNDKTGVVHAPIGKASFESGNLSANYQALISALEGAKPGTAKGVFL 205 Query: 394 ASA 396 SA Sbjct: 206 RSA 208 >2ZJO-A nrPDB Length = 482 Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 5/76 (6%) Query: 379 IIEMAREAGAKKVYLASAAPE----IRFPNVYGIDMPSATELIAHGREVDEIRQIIGADG 434 +++ A AGA+ V LA+A P + PN+ I + + E+ +G+ + I I G Sbjct: 151 VLDQAETAGARLVVLATATPPGSVTVPHPNIEEIALSNTGEIPFYGKAI-PIETIKGGRH 209 Query: 435 LIFQDLNDLIDAVRAE 450 LIF D + A+ Sbjct: 210 LIFCHSKKKCDELAAK 225 >1IOO-A nrPDB Length = 196 Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust. Identities = 13/31 (41%), Positives = 17/31 (54%) Query: 425 EIRQIIGADGLIFQDLNDLIDAVRAENPDIQ 455 + +II FQD+ D I V ENPDI+ Sbjct: 122 QTHRIIPGSSYTFQDIFDAIKTVSQENPDIK 152 >4S2R-P nrPDB Length = 639 Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust. Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 4/37 (10%) Query: 65 QGNMGIGHVRYPTAGSSSASEA---QP-FYVNSPYGI 97 +G +GIGH PT G AS+ +P FY YGI Sbjct: 520 EGPIGIGHRSVPTGGELHASQVLTIEPGFYAKEKYGI 556 >2IL3-A nrPDB Length = 221 Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust. Identities = 16/34 (47%), Positives = 20/34 (58%) Query: 189 RPLVLGKRDIDENRTEYMVASESVALDTLGFDFL 222 R L GK DI E+R EY+ S + DTL DF+ Sbjct: 117 RILFFGKSDIPEDRVEYVQKSYELLEDTLVDDFV 150 >4B6E-A nrPDB Length = 683 Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust. Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 5/76 (6%) Query: 379 IIEMAREAGAKKVYLASAAP----EIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADG 434 +++ A AGA+ V LA+A P + PN+ + + + E+ +G+ + I I G Sbjct: 341 VLDQAETAGARLVVLATATPPGSVTVPHPNIEEVALSNTGEIPFYGKAI-PIEAIRGGRH 399 Query: 435 LIFQDLNDLIDAVRAE 450 LIF D + A+ Sbjct: 400 LIFCHSKKKCDELAAK 415 >5T3O-A nrPDB Length = 307 Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust. Identities = 15/39 (38%), Positives = 22/39 (56%) Query: 357 EFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLAS 395 E K L+VDD I + + +E +AGAK+VY A+ Sbjct: 207 EVEGKTALIVDDEISTAGSLVEAVEALMQAGAKEVYAAA 245 >4OK6-A nrPDB Length = 464 Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust. Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 5/76 (6%) Query: 379 IIEMAREAGAKKVYLASAAPE----IRFPNVYGIDMPSATELIAHGREVDEIRQIIGADG 434 +++ A AGA+ V LA+A P + PN+ + + + E+ +G+ + + I G Sbjct: 140 VLDQAETAGARLVVLATATPPGSVTVSHPNIEEVALSTTGEIPFYGKAI-PLEVIKGGRH 198 Query: 435 LIFQDLNDLIDAVRAE 450 LIF D + A+ Sbjct: 199 LIFCHSKKKCDELAAK 214 >1QK4-A nrPDB Length = 233 Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust. Identities = 15/45 (33%), Positives = 27/45 (60%) Query: 351 LNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLAS 395 L+ + + FRDK+VL+V+D + G T + E + G K + +A+ Sbjct: 133 LSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIAT 177 >5MP7-A nrPDB Length = 326 Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 340 QQLRRKSVRRKLNANR--AEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLAS 395 + R V ++ +NR + + K +L DD I G T + + RE GAK V +A+ Sbjct: 201 HKTRDPLVPNQVKSNRVVGDVKGKTCILTDDMIDTGGTIAGAVNLLREDGAKDVIIAA 258 >5HIA-A nrPDB Length = 224 Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 22/35 (62%) Query: 361 KNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLAS 395 KNVL+V+D I G T + ++ + R+ K V +AS Sbjct: 134 KNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVAS 168 >6E7Z-A nrPDB Length = 580 Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Query: 205 YMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFTRQCADNPVS 250 YMV S +AL T +D ++ PG A E Q + QC D+P S Sbjct: 507 YMVLSLFIALITGAYDTIKH--PGGAGAEESELQAYIAQCQDSPTS 550 >1WD5-A nrPDB Length = 208 Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust. Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 6/114 (5%) Query: 280 GTKLGEKIAREWE-DLDIDVVIPI-----PETSCDIALEIARILGKPYRQGFVKNRYVGR 333 G + +++AR +LD+ +V + PE + E ++ PY + Y+ R Sbjct: 34 GVVVADEVARRLGGELDVVLVRKVGAPGNPEFALGAVGEGGELVLMPYALRYADQSYLER 93 Query: 334 TFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAG 387 LR+++ R + +A + ++V+LVDD + G + E + + + G Sbjct: 94 EAARQRDVLRKRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEG 147 >2WNW-A nrPDB Length = 447 Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust. Identities = 13/35 (37%), Positives = 20/35 (57%) Query: 180 VAFRDPNGIRPLVLGKRDIDENRTEYMVASESVAL 214 V F +P+G R LV+ RD+ E R + + +AL Sbjct: 396 VGFVNPDGERVLVVYNRDVQERRCRVLDGDKEIAL 430 >2VFA-A nrPDB Length = 229 Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust. Identities = 13/35 (37%), Positives = 21/35 (60%) Query: 361 KNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLAS 395 KNVL+V+D I G T + ++ + R+ K V +A Sbjct: 136 KNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVAC 170 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1ECF-A nrPDB 837 0.0 1AO0-A nrPDB 665 0.0 4AMV-A nrPDB 255 4e-68 Sequences not found previously or not previously below threshold: 3MDN-A nrPDB 43 3e-04 3NAG-A nrPDB 41 0.001 5T3O-A nrPDB 40 0.002 1WD5-A nrPDB 40 0.003 1CT9-A nrPDB 39 0.006 1VDM-A nrPDB 38 0.013 1DKU-A nrPDB 37 0.016 5MP7-A nrPDB 37 0.019 3QW4-B nrPDB 36 0.042 4PFQ-A nrPDB 35 0.054 1U9Y-A nrPDB 35 0.11 1VCH-A nrPDB 34 0.20 4TWB-A nrPDB 33 0.37 1Q7Q-A nrPDB 32 0.73 4S2U-A nrPDB 32 0.83 5IPF-A nrPDB 32 0.95 2P1Z-A nrPDB 30 1.6 1IOO-A nrPDB 30 2.1 3DAH-A nrPDB 30 2.1 2ZJO-A nrPDB 30 2.2 6NFE-A nrPDB 30 2.3 4OK6-A nrPDB 30 2.7 6FSP-A nrPDB 30 3.5 1P4A-A nrPDB 30 3.6 4B6E-A nrPDB 29 3.8 5HIA-A nrPDB 29 4.4 3MT1-A nrPDB 29 4.5 5A08-A nrPDB 29 6.3 2VFA-A nrPDB 29 7.7 >1ECF-A nrPDB Length = 504 Score = 837 bits (2161), Expect = 0.0, Method: Composition-based stats. Identities = 504/504 (100%), Positives = 504/504 (100%) Query: 2 CGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARHM 61 CGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARHM Sbjct: 1 CGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARHM 60 Query: 62 QRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKRR 121 QRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKRR Sbjct: 61 QRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKRR 120 Query: 122 HINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMVA 181 HINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMVA Sbjct: 121 HINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMVA 180 Query: 182 FRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFT 241 FRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFT Sbjct: 181 FRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFT 240 Query: 242 RQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVIP 301 RQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVIP Sbjct: 241 RQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVIP 300 Query: 302 IPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDK 361 IPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDK Sbjct: 301 IPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDK 360 Query: 362 NVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAHGR 421 NVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAHGR Sbjct: 361 NVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAHGR 420 Query: 422 EVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFECSVFNGVYVTKDVDQGYLDFLDT 481 EVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFECSVFNGVYVTKDVDQGYLDFLDT Sbjct: 421 EVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFECSVFNGVYVTKDVDQGYLDFLDT 480 Query: 482 LRNDDAKAVQRQNEVENLEMHNEG 505 LRNDDAKAVQRQNEVENLEMHNEG Sbjct: 481 LRNDDAKAVQRQNEVENLEMHNEG 504 >1AO0-A nrPDB Length = 459 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 191/471 (40%), Positives = 272/471 (57%), Gaps = 26/471 (5%) Query: 2 CGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARHM 61 CG+ GI G Q Y L LQHRGQ+ AGI+ D K GL+++VF+ + Sbjct: 1 CGVFGIWGHEEAPQITYYGLHSLQHRGQEGAGIVATDGEK-LTAHKGQGLITEVFQNGEL 59 Query: 62 QRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPY--GITLAHNGNLTNAHELRKKLFEEK 119 +++G IGHVRY TAG QP S + LAHNGNL NA +L+++L E + Sbjct: 60 SKVKGKGAIGHVRYATAGGGGYENVQPLLFRSQNNGSLALAHNGNLVNATQLKQQL-ENQ 118 Query: 120 RRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGM 179 T+SD+E+L ++ + H+ L+ D I +++ +++GAYA + M + Sbjct: 119 GSIFQTSSDTEVLAHL----IKRSGHFTLK-DQIKNSLS----MLKGAYAFLIMTETEMI 169 Query: 180 VAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQL 239 VA DPNG+RPL +G Y+VASE+ A D +G +LR+V PGE + I +EG + Sbjct: 170 VAL-DPNGLRPLSIGMMG-----DAYVVASETCAFDVVGATYLREVEPGEMLIINDEG-M 222 Query: 240 FTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVV 299 + + + N + C EY+YF+RPDS ID I+V+SAR N+G L ++ A ++ DVV Sbjct: 223 KSERFSMNINRSICSMEYIYFSRPDSNIDGINVHSARKNLGKMLAQESA-----VEADVV 277 Query: 300 IPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFR 359 +P++S A+ A G PY G +KNRYVGRTFI P Q LR + VR KL+A R Sbjct: 278 TGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQALREQGVRMKLSAVRGVVE 337 Query: 360 DKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAH 419 K V++VDDSIVRGTTS +I+ M REAGA +V++ ++P I P YGID + ELIA Sbjct: 338 GKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISSPPIAHPCFYGIDTSTHEELIAS 397 Query: 420 GREVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFEC-SVFNGVYVTK 469 V+EIRQ IGAD L F + L+ + + D +C + F G Y T+ Sbjct: 398 SHSVEEIRQEIGADTLSFLSVEGLLKGIGRKYDDSNCGQCLACFTGKYPTE 448 >4AMV-A nrPDB Length = 609 Score = 255 bits (651), Expect = 4e-68, Method: Composition-based stats. Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 19/215 (8%) Query: 1 MCGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDA-NNCFRLRKANGLVSDVFEAR 59 MCGIVG V + + + L L++RG D+AG+ +DA + RLR+ G V + +A Sbjct: 1 MCGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRL-GKVQMLAQAA 59 Query: 60 HMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEK 119 L G GI H R+ T G S A P I + HNG + N LR++L Sbjct: 60 EEHPLHGGTGIAHTRWATHGEPSEVNAHPHVSEH---IVVVHNGIIENHEPLREELKARG 116 Query: 120 RRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGM 179 ++ T D+E++ ++ EL + + A+ +RGAY V M H Sbjct: 117 YTFVSET-DTEVIAHLVNWELK-------QGGTLREAVLRAIPQLRGAYGTVIMDSRHPD 168 Query: 180 VAFRDPNGIRPLVLGKRDIDENRTEYMVASESVAL 214 +G PLV+G E +AS+ +AL Sbjct: 169 TLLAARSG-SPLVIGL-----GMGENFIASDQLAL 197 >3MDN-A nrPDB Length = 274 Score = 43.1 bits (100), Expect = 3e-04, Method: Composition-based stats. Identities = 51/231 (22%), Positives = 80/231 (34%), Gaps = 46/231 (19%) Query: 30 DAAGIITIDANNCFRLRKANGLVSDVFEA-------RHMQRLQGNMGIGHVRYPTAGSSS 82 D G+ DA R GL DV+ A ++ + + HVR T S Sbjct: 44 DGFGVAWYDA------RPEPGLYRDVYPAWSDPNLRAVAHHVRSGLFLSHVRASTGSCIS 97 Query: 83 ASEAQPFYVNSPYGITLAHNGNLTNAHELRKK----LFEEKRRHINTTSDSEILLNIFAS 138 + PF HNG + RK+ + +E + ++DSE+L + S Sbjct: 98 RNNCHPFAARRW---CFMHNGQVGGFEAFRKQADMAIADEFYTYRKGSTDSEVLFLLALS 154 Query: 139 E-LDNFRHYPLEADNIFAAIAATNRLIRG---AYAC-----VAMIIGHGMVAFRDP---N 186 E L++ H A+A + G A+ ++ G + + Sbjct: 155 EGLEHDPH---------GALARAIARLEGLSRAHGTTPHMRLSAAFSDGQTLYAARYSSD 205 Query: 187 GIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEG 237 I P V R + V SE + D + LR PG + I EG Sbjct: 206 HIAPSVY--YRYSHARQGWAVVSEPLETDEGDWTELR---PGRMLTIGAEG 251 >3NAG-A nrPDB Length = 286 Score = 40.8 bits (94), Expect = 0.001, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 15/109 (13%) Query: 287 IAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKS 346 I R ++++D+D V+ P+ +AR+ + G + F + +++ ++ Sbjct: 145 IVRYYKNVDVDYVVS-PDDG-----GLARVADISAKLG-------KKHFFIEKKRIDDRT 191 Query: 347 VRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLAS 395 V K+ + K +L+VDD I G T + + RE GA K+Y+++ Sbjct: 192 VEMKVPNV--DVNGKKLLIVDDIISTGGTIAKSSGLLREKGASKIYVSA 238 >5T3O-A nrPDB Length = 307 Score = 40.1 bits (92), Expect = 0.002, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 48/127 (37%), Gaps = 15/127 (11%) Query: 293 DLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLN 352 DL+ VV+ A +AR LG P F+ V T VR + Sbjct: 158 DLENAVVVAPDAGDLKRASALARRLGLP--LAFIDKERVSDT---------EVRVRMLV- 205 Query: 353 ANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPS 412 E K L+VDD I + + +E +AGAK+VY A+ P + I Sbjct: 206 ---GEVEGKTALIVDDEISTAGSLVEAVEALMQAGAKEVYAAATHGVYVGPALDRIAKSP 262 Query: 413 ATELIAH 419 E+ A Sbjct: 263 VKEVAAT 269 >1WD5-A nrPDB Length = 208 Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 51/115 (44%), Gaps = 8/115 (6%) Query: 280 GTKLGEKIAREWEDLDIDVVI-------PIPETSCDIALEIARILGKPYRQGFVKNRYVG 332 G + +++AR ++DVV+ PE + E ++ PY + Y+ Sbjct: 34 GVVVADEVARRLGG-ELDVVLVRKVGAPGNPEFALGAVGEGGELVLMPYALRYADQSYLE 92 Query: 333 RTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAG 387 R LR+++ R + +A + ++V+LVDD + G + E + + + G Sbjct: 93 REAARQRDVLRKRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEG 147 >1CT9-A nrPDB Length = 553 Score = 38.5 bits (88), Expect = 0.006, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 27/157 (17%) Query: 86 AQPFYVNSPYGITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRH 145 AQP Y N LA NG + N LR + + + T SD E++L ++ + F Sbjct: 59 AQPLY-NQQKTHVLAVNGEIYNHQALRAEYGDRYQ--FQTGSDCEVILALYQEKGPEF-- 113 Query: 146 YPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMVAF-RDPNGIRPLVLGKRDIDENRTE 204 ++G +A RD GI PL +G + + Sbjct: 114 ---------------LDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMG----YDEHGQ 154 Query: 205 YMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFT 241 VASE AL + +++ G ++ +++G++ + Sbjct: 155 LYVASEMKALVPVCRT-IKEFPAGSYLW-SQDGEIRS 189 >1VDM-A nrPDB Length = 153 Score = 37.8 bits (86), Expect = 0.013, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 12/110 (10%) Query: 287 IAREWEDLDIDVVIPIPETSCDIALEIARILG-KPYRQGFVKNRYVGRTFIMPGQQLRRK 345 +A + + DV+I + A+ ++ ILG P + VK Y G + + Sbjct: 18 LAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVK-FYKG---------IDER 67 Query: 346 SVRRKLN-ANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLA 394 + + + +DK V++VDD G T E +IE ++ GAK++ +A Sbjct: 68 GEKPVITIPIHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIA 117 >1DKU-A nrPDB Length = 317 Score = 37.4 bits (85), Expect = 0.016, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 25/65 (38%) Query: 356 AEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATE 415 K +L+DD I T E GAK+VY P + P V I+ + E Sbjct: 213 GNIEGKTAILIDDIIDTAGTITLAANALVENGAKEVYACCTHPVLSGPAVERINNSTIKE 272 Query: 416 LIAHG 420 L+ Sbjct: 273 LVVTN 277 >5MP7-A nrPDB Length = 326 Score = 37.0 bits (84), Expect = 0.019, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 15/111 (13%) Query: 295 DIDVVIPIPETS-CDIALEIARILG-KPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLN 352 D D+V+ P++ +A + A LG P F+ R ++P Q K N Sbjct: 169 DEDMVVVSPDSGRVRVAEKWADSLGGVP--LAFIHKT---RDPLVPNQ--------VKSN 215 Query: 353 ANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFP 403 + + K +L DD I G T + + RE GAK V +A+ + P Sbjct: 216 RVVGDVKGKTCILTDDMIDTGGTIAGAVNLLREDGAKDVIIAATHGVLSDP 266 >3QW4-B nrPDB Length = 453 Score = 35.8 bits (81), Expect = 0.042, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 43/116 (37%), Gaps = 18/116 (15%) Query: 281 TKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQ 340 + + A+ D + +P + IA I+ + P I P + Sbjct: 302 RLVAREYAKVLRHYKFDRIAGLPYAALPIASAISNEMNVP--------------LIYPRR 347 Query: 341 QLRRKSVRRKLNANRAEFR-DKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLAS 395 + + + A E++ V+++DD + G T + IE R AG + V + Sbjct: 348 EAKIYGTK---AAIEGEYKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVV 400 >4PFQ-A nrPDB Length = 207 Score = 35.4 bits (80), Expect = 0.054, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 8/113 (7%) Query: 283 LGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQL 342 LGE+IA ++ + + V++ + + + ++AR + ++ G Sbjct: 50 LGEQIAADYAE-EPPVLVGVLRGAVMVMADLARQIDLKVEMDWMAVSSYG-------SGT 101 Query: 343 RRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLAS 395 + V R L + D+NVL+V+D I G T + ++ R G K V +A+ Sbjct: 102 KSSGVVRILKDLSGDITDRNVLIVEDIIDSGLTLKWLLSNLRSRGPKSVEVAA 154 >1U9Y-A nrPDB Length = 284 Score = 34.7 bits (78), Expect = 0.11, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 66/151 (43%), Gaps = 14/151 (9%) Query: 286 KIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRK 345 K+A +D D ++ P+ ALE A+ K + Y+ +T + P + Sbjct: 145 KLAEYVKDKLNDPIVLAPDKG---ALEFAKTASKILNAEY---DYLEKTRLSPTE----- 193 Query: 346 SVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNV 405 ++ + +D++V +VDD I G T +++ +E GAKK+ A P + + Sbjct: 194 ---IQIAPKTLDAKDRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIAACVHPVLIGDAL 250 Query: 406 YGIDMPSATELIAHGREVDEIRQIIGADGLI 436 + E++ + E+ ++ A+ ++ Sbjct: 251 NKLYSAGVEEVVGTDTYLSEVSKVSVAEVIV 281 >1VCH-A nrPDB Length = 175 Score = 33.5 bits (75), Expect = 0.20, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 5/115 (4%) Query: 281 TKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNR-YVGRTFIMPG 339 T+ + R + +++ + + +A LG PY + R Y+ I Sbjct: 38 TRAAAEALRPLVPKEAEILFTTETSPIPLTHVLAEALGLPYVVARRRRRPYMEDPIIQEV 97 Query: 340 QQLRRKSVRRKLNANRAEFR---DKNVLLVDDSIVRGTTSEQIIEMAREAGAKKV 391 Q L V L +R ++ V+LV D + G T + +M AG V Sbjct: 98 QTL-TLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVV 151 >4TWB-A nrPDB Length = 291 Score = 32.7 bits (73), Expect = 0.37, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 14/112 (12%) Query: 285 EKIAREWEDLDIDVVIPIPE-TSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLR 343 +IAR+ +++ D I P+ + D A +IA + PY ++I + Sbjct: 146 HQIARKIKEIIEDPFILAPDRGALDRARKIAEEINAPY------------SYIEKERDRT 193 Query: 344 RKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLAS 395 VR K A + K+V+++DD I G T Q +A GAK V A+ Sbjct: 194 TGEVRIK-EAPNINLKGKDVVIIDDIISTGGTIVQATRLAYSLGAKSVTAAA 244 >1Q7Q-A nrPDB Length = 566 Score = 31.6 bits (70), Expect = 0.73, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 23/112 (20%) Query: 334 TFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYL 393 TF +LR+ + KL D IVR + +AR A +K+ Sbjct: 65 TFGATRMKLRKHGLEDKL----------------DPIVRNA-----VRIARRAAGEKLVF 103 Query: 394 ASAAPEIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLID 445 P P Y + E + RE EI G DG+IF+ +D+++ Sbjct: 104 GDIGPTGELP--YPLGSTLFEEFYENFRETVEIMVEEGVDGIIFETFSDILE 153 >4S2U-A nrPDB Length = 316 Score = 31.6 bits (70), Expect = 0.83, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 23/43 (53%) Query: 356 AEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAP 398 + ++ +LVDD I G T + E +E GAK+V+ + P Sbjct: 210 GDVAGRDCVLVDDMIDTGGTLCKAAEALKERGAKRVFAYATHP 252 >5IPF-A nrPDB Length = 250 Score = 31.6 bits (70), Expect = 0.95, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 6/63 (9%) Query: 356 AEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLAS-----AAPEIRF-PNVYGID 409 +E++DKNVL+V+D I G T ++I K V +AS +P + P+ G + Sbjct: 148 SEYKDKNVLVVEDIIDTGKTITKLISHLDSLSTKSVKVASLLVKRTSPRNDYRPDFVGFE 207 Query: 410 MPS 412 +P+ Sbjct: 208 VPN 210 >2P1Z-A nrPDB Length = 180 Score = 30.4 bits (67), Expect = 1.6, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 32/56 (57%), Gaps = 2/56 (3%) Query: 340 QQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLAS 395 ++ ++ ++R++ + K VL+V+D+ G + ++ REAGA+ V +A+ Sbjct: 96 KEAKKHGMQRRIEG--PDVVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVAT 149 >1IOO-A nrPDB Length = 196 Score = 30.4 bits (67), Expect = 2.1, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 18/34 (52%) Query: 425 EIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFE 458 + +II FQD+ D I V ENPDI+ E Sbjct: 122 QTHRIIPGSSYTFQDIFDAIKTVSQENPDIKCAE 155 >3DAH-A nrPDB Length = 319 Score = 30.1 bits (66), Expect = 2.1, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 28/64 (43%) Query: 356 AEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATE 415 E + +++DD + T + ++ +E GAK+V+ + P + I + E Sbjct: 212 GEVEGRTCVIMDDMVDTAGTLCKAAQVLKERGAKQVFAYATHPVLSGGAADRIAASALDE 271 Query: 416 LIAH 419 L+ Sbjct: 272 LVVT 275 >2ZJO-A nrPDB Length = 482 Score = 30.1 bits (66), Expect = 2.2, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Query: 379 IIEMAREAGAKKVYLASAAPE----IRFPNVYGIDMPSATELIAHGREVDEIRQIIGADG 434 +++ A AGA+ V LA+A P + PN+ I + + E+ +G+ + I I G Sbjct: 151 VLDQAETAGARLVVLATATPPGSVTVPHPNIEEIALSNTGEIPFYGKAI-PIETIKGGRH 209 Query: 435 LIF 437 LIF Sbjct: 210 LIF 212 >6NFE-A nrPDB Length = 323 Score = 30.1 bits (66), Expect = 2.3, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 8/89 (8%) Query: 356 AEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATE 415 E +KN ++VDD + T ++ GAK V P + P V I E Sbjct: 217 GEPANKNCIIVDDIVDTAGTLCTAAHELKKNGAKSVRAYITHPVLSGPAVNNIKHSGLDE 276 Query: 416 LI--------AHGREVDEIRQIIGADGLI 436 ++ A + ++IR + AD L Sbjct: 277 VVVTDTIPLSAEAQNCEKIRVVSLADMLA 305 >4OK6-A nrPDB Length = 464 Score = 30.1 bits (66), Expect = 2.7, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Query: 379 IIEMAREAGAKKVYLASAAPE----IRFPNVYGIDMPSATELIAHGREVDEIRQIIGADG 434 +++ A AGA+ V LA+A P + PN+ + + + E+ +G+ + + I G Sbjct: 140 VLDQAETAGARLVVLATATPPGSVTVSHPNIEEVALSTTGEIPFYGKAI-PLEVIKGGRH 198 Query: 435 LIF 437 LIF Sbjct: 199 LIF 201 >6FSP-A nrPDB Length = 174 Score = 29.7 bits (65), Expect = 3.5, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 9/105 (8%) Query: 295 DIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMP--GQQLRRKSVRRKLN 352 +++V++ + +A ++RI GKPY V + I P Q L + + +L Sbjct: 51 EVEVLVTPEVKAVPLAHALSRITGKPY---VVARKTEKPYMINPVSRQVLSITTGKPQLL 107 Query: 353 ANRAE----FRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYL 393 R K V +VDD + G+T + E+ G + V + Sbjct: 108 VLDGADIPRVRGKKVAIVDDVVSTGSTLAGLRELIESVGGEVVAV 152 >1P4A-A nrPDB Length = 285 Score = 29.7 bits (65), Expect = 3.6, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 1/109 (0%) Query: 281 TKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYV-GRTFIMPG 339 +K+G+ A + + +IDVV+ + +A A L P N+ G T + Sbjct: 116 SKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVRKDNKVTEGSTVSINY 175 Query: 340 QQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGA 388 ++ A R+ NVL++DD + G T +I + E A Sbjct: 176 VSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNA 224 >4B6E-A nrPDB Length = 683 Score = 29.3 bits (64), Expect = 3.8, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Query: 379 IIEMAREAGAKKVYLASAAPE----IRFPNVYGIDMPSATELIAHGREVDEIRQIIGADG 434 +++ A AGA+ V LA+A P + PN+ + + + E+ +G+ + I I G Sbjct: 341 VLDQAETAGARLVVLATATPPGSVTVPHPNIEEVALSNTGEIPFYGKAI-PIEAIRGGRH 399 Query: 435 LIF 437 LIF Sbjct: 400 LIF 402 >5HIA-A nrPDB Length = 224 Score = 29.3 bits (64), Expect = 4.4, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 22/36 (61%) Query: 360 DKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLAS 395 KNVL+V+D I G T + ++ + R+ K V +AS Sbjct: 133 GKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVAS 168 >3MT1-A nrPDB Length = 365 Score = 29.3 bits (64), Expect = 4.5, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 23/49 (46%) Query: 322 RQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSI 370 R +RY + ++ PG+ KS ++ + KN+ +VD SI Sbjct: 215 RLRAFSDRYGVQIYLEPGEASITKSTTLEVTVLDTLYNGKNLAIVDSSI 263 >5A08-A nrPDB Length = 434 Score = 28.5 bits (62), Expect = 6.3, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Query: 214 LDTLGFDFLRDVAPGE--AIYITEEGQLFTRQCADNPVSNPCL 254 + + DFLR P E Y+ E+G + + D PV + L Sbjct: 321 FEIVDLDFLRS-EPYEKYMQYLEEKGGFYYERWGDAPVRSLAL 362 >2VFA-A nrPDB Length = 229 Score = 28.5 bits (62), Expect = 7.7, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 21/35 (60%) Query: 360 DKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLA 394 KNVL+V+D I G T + ++ + R+ K V +A Sbjct: 135 GKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVA 169 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.316 0.132 0.346 Lambda K H 0.267 0.0402 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,081,450 Number of Sequences: 36641 Number of extensions: 719319 Number of successful extensions: 2195 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 41 Number of HSP's successfully gapped in prelim test: 28 Number of HSP's that attempted gapping in prelim test: 2131 Number of HSP's gapped (non-prelim): 70 length of query: 505 length of database: 10,336,785 effective HSP length: 101 effective length of query: 404 effective length of database: 6,636,044 effective search space: 2680961776 effective search space used: 2680961776 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 61 (28.1 bits)