BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= P0AEE3
(355 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
3GCO-A nrPDB 645 0.0
2QF3-A nrPDB 460 e-130
5JD8-A nrPDB 456 e-129
2R3U-A nrPDB 419 e-118
3STJ-A nrPDB 209 1e-54
4A8B-A nrPDB 207 5e-54
3MH6-A nrPDB 204 6e-53
5Y2D-A nrPDB 197 6e-51
5Y28-A nrPDB 197 6e-51
3PV2-A nrPDB 193 1e-49
3PV4-A nrPDB 192 1e-49
4YNN-A nrPDB 191 3e-49
4YO1-A nrPDB 191 4e-49
5T69-A nrPDB 162 2e-40
3STI-A nrPDB 158 4e-39
3QO6-A nrPDB 158 4e-39
6IEO-A nrPDB 150 8e-37
4RI0-A nrPDB 142 2e-34
3NUM-A nrPDB 139 1e-33
4IC6-A nrPDB 135 3e-32
1L1J-A nrPDB 129 2e-30
2Z9I-A nrPDB 117 9e-27
3TJO-A nrPDB 114 7e-26
5M3O-A nrPDB 113 1e-25
4IC5-A nrPDB 100 7e-22
5ILB-A nrPDB 65 6e-11
4FLN-A nrPDB 64 7e-11
5HM9-A nrPDB 52 3e-07
5JYK-A nrPDB 52 6e-07
5ILA-A nrPDB 45 5e-05
4FGM-A nrPDB 39 0.004
2KJP-A nrPDB 37 0.010
5C2Z-A nrPDB 34 0.11
2VZ5-A nrPDB 33 0.15
3LT3-A nrPDB 33 0.20
2L4S-A nrPDB 33 0.27
1VRA-B nrPDB 32 0.33
4O06-A nrPDB 31 0.87
5KAY-A nrPDB 30 1.5
6A9U-A nrPDB 30 1.6
1WCZ-A nrPDB 29 2.8
4C2G-A nrPDB 29 3.2
2AS9-A nrPDB 29 3.7
1DT2-A nrPDB 28 4.1
2V90-A nrPDB 28 5.2
5JWG-A nrPDB 28 5.3
2W7U-A nrPDB 28 5.3
5MM8-A nrPDB 28 5.7
3WYB-A nrPDB 28 5.7
4K1S-A nrPDB 28 6.2
4XZY-A nrPDB 28 6.2
4DLL-A nrPDB 28 6.4
1FC9-A nrPDB 28 7.3
3EGH-C nrPDB 27 9.7
5ZDS-A nrPDB 27 9.9
>3GCO-A nrPDB
Length = 340
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/329 (99%), Positives = 327/329 (99%)
Query: 27 RSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMD 86
RSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMD
Sbjct: 12 RSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMD 71
Query: 87 QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINAR 146
QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINAR
Sbjct: 72 QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINAR 131
Query: 147 RVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALV 206
RVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASIN GNSGGALV
Sbjct: 132 RVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINPGNSGGALV 191
Query: 207 NSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREI 266
NSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREI
Sbjct: 192 NSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREI 251
Query: 267 APLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIR 326
APLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETM QVAEIR
Sbjct: 252 APLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMAQVAEIR 311
Query: 327 PGSVIPVVVMRDDKQLTLQVTIQEYPATN 355
PGSVIPVVVMRDDKQLTLQVTIQEYPATN
Sbjct: 312 PGSVIPVVVMRDDKQLTLQVTIQEYPATN 340
>2QF3-A nrPDB
Length = 243
Score = 460 bits (1183), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/230 (100%), Positives = 230/230 (100%)
Query: 27 RSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMD 86
RSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMD
Sbjct: 14 RSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMD 73
Query: 87 QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINAR 146
QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINAR
Sbjct: 74 QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINAR 133
Query: 147 RVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALV 206
RVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALV
Sbjct: 134 RVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALV 193
Query: 207 NSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIR 256
NSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIR
Sbjct: 194 NSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIR 243
>5JD8-A nrPDB
Length = 334
Score = 456 bits (1174), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/310 (73%), Positives = 266/310 (85%), Gaps = 2/310 (0%)
Query: 41 DETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVIND 100
+E P SYN AVRRAAPAVVNVYNR L+ + L IRTLGSGVIM +GYI+TNKHVIND
Sbjct: 14 EEVPTSYNQAVRRAAPAVVNVYNRSLSA-TQQGLAIRTLGSGVIMSDKGYILTNKHVIND 72
Query: 101 ADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGN 160
A+QIIVA+Q+GR+ EALLVGSD+LTDLAVLKI+AT LP IPIN R PHIGDVVLAIGN
Sbjct: 73 AEQIIVAMQNGRISEALLVGSDNLTDLAVLKIDATN-LPVIPININRTPHIGDVVLAIGN 131
Query: 161 PYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSF 220
PYNLGQT+TQGIISATGRIGL+ +GRQNFLQTDASIN GNSGGALVN+LGELMGINTLSF
Sbjct: 132 PYNLGQTVTQGIISATGRIGLSSSGRQNFLQTDASINQGNSGGALVNTLGELMGINTLSF 191
Query: 221 DKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQ 280
DKSN+GETPEGIGFAIP LATK+M+KLIRDGRVIRGYIGI G E P +A G D++
Sbjct: 192 DKSNNGETPEGIGFAIPTALATKVMEKLIRDGRVIRGYIGITGEEYPPFNANDNGSDRVH 251
Query: 281 GIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDK 340
GI V +VSPDGPAA AGI V D+I++V+NKPA S +ETMDQVAE+RPG+ IPV+++R+ +
Sbjct: 252 GIKVKKVSPDGPAAQAGIHVGDIILNVNNKPATSVIETMDQVAEVRPGTTIPVLLLRNGQ 311
Query: 341 QLTLQVTIQE 350
Q+ +Q+TI E
Sbjct: 312 QIAVQITITE 321
>2R3U-A nrPDB
Length = 211
Score = 419 bits (1078), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/210 (100%), Positives = 210/210 (100%)
Query: 43 TPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD 102
TPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD
Sbjct: 2 TPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD 61
Query: 103 QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPY 162
QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPY
Sbjct: 62 QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPY 121
Query: 163 NLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDK 222
NLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDK
Sbjct: 122 NLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDK 181
Query: 223 SNDGETPEGIGFAIPFQLATKIMDKLIRDG 252
SNDGETPEGIGFAIPFQLATKIMDKLIRDG
Sbjct: 182 SNDGETPEGIGFAIPFQLATKIMDKLIRDG 211
>3STJ-A nrPDB
Length = 345
Score = 209 bits (532), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/271 (44%), Positives = 171/271 (63%), Gaps = 4/271 (1%)
Query: 79 LGSGVIMD-QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGG 137
LGSGVI++ +GY++TN HVIN A +I + L DGR F+A L+GSD +D+A+L+I
Sbjct: 64 LGSGVIINASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSK 123
Query: 138 LPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASIN 197
L I I +GD +A+GNP+ LGQT T GI+SA GR GLN G +NF+QTDASIN
Sbjct: 124 LTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDASIN 183
Query: 198 HGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRG 257
GNSGGAL+N GEL+GINT G GIGFAIP +A + +LI G + RG
Sbjct: 184 RGNSGGALLNLNGELIGINTAILAP---GGGSVGIGFAIPSNMARTLAQQLIDFGEIKRG 240
Query: 258 YIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALE 317
+GI G E++ A+ +D +G V+EV P +A AG++ D+I S++ KP S E
Sbjct: 241 LLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAE 300
Query: 318 TMDQVAEIRPGSVIPVVVMRDDKQLTLQVTI 348
++A PG+ + + ++R+ K L ++VT+
Sbjct: 301 LRSRIATTEPGTKVKLGLLRNGKPLEVEVTL 331
>4A8B-A nrPDB
Length = 436
Score = 207 bits (528), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 120/271 (44%), Positives = 171/271 (63%), Gaps = 4/271 (1%)
Query: 79 LGSGVIMD-QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGG 137
LGSGVI++ +GY++TN HVIN A +I + L DGR F+A L+GSD +D+A+L+I
Sbjct: 64 LGSGVIINASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSK 123
Query: 138 LPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASIN 197
L I I +GD +A+GNP+ LGQT T GI+SA GR GLN G +NF+QTDASIN
Sbjct: 124 LTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDASIN 183
Query: 198 HGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRG 257
GN+GGAL+N GEL+GINT G GIGFAIP +A + +LI G + RG
Sbjct: 184 RGNAGGALLNLNGELIGINTAILAP---GGGSVGIGFAIPSNMARTLAQQLIDFGEIKRG 240
Query: 258 YIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALE 317
+GI G E++ A+ +D +G V+EV P +A AG++ D+I S++ KP S E
Sbjct: 241 LLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAE 300
Query: 318 TMDQVAEIRPGSVIPVVVMRDDKQLTLQVTI 348
++A PG+ + + ++R+ K L ++VT+
Sbjct: 301 LRSRIATTEPGTKVKLGLLRNGKPLEVEVTL 331
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 280 QGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDD 339
+GI ++EV PAA AG+Q +D+II V N+ ++++ M +V +P ++I + ++R +
Sbjct: 363 KGIKIDEVVKGSPAAQAGLQKDDVIIGV-NRDRVNSIAEMRKVLAAKP-AIIALQIVRGN 420
Query: 340 KQLTLQVTIQ 349
+ + L + ++
Sbjct: 421 ESIYLLMRLE 430
>3MH6-A nrPDB
Length = 456
Score = 204 bits (518), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 118/279 (42%), Positives = 173/279 (62%), Gaps = 8/279 (2%)
Query: 75 EIRTLGSGVIMD-QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKIN 133
+ LGSGVI+D +GY++TN HV+++A I V L DGR F+A +VG D +D+A+++I
Sbjct: 83 KFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQ 142
Query: 134 ATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTD 193
L I + +GD +AIGNP+ LG+T+T GI+SA GR GLN +NF+QTD
Sbjct: 143 NPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTD 202
Query: 194 ASINHGNSGGALVNSLGELMGINT--LSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRD 251
A+IN GNSGGALVN GEL+GINT L+ D N GIGFAIP + + +++
Sbjct: 203 AAINRGNSGGALVNLNGELIGINTAILAPDGGN-----IGIGFAIPSNMVKNLTSQMVEY 257
Query: 252 GRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKP 311
G+V RG +GI G E+ A+ +D +G V++V P+ AA AGI+ D+I S++ KP
Sbjct: 258 GQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKP 317
Query: 312 AISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQE 350
S QV + GS + + ++RD KQ+ + + +Q+
Sbjct: 318 ISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQ 356
Score = 34.7 bits (78), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 280 QGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDD 339
QG+VVN V PAA G++ D+II N+ A+ + + +V + +P SV+ + + R D
Sbjct: 383 QGVVVNNVKTGTPAAQIGLKKGDVIIGA-NQQAVKNIAELRKVLDSKP-SVLALNIQRGD 440
Query: 340 KQLTL 344
+ L
Sbjct: 441 STIYL 445
>5Y2D-A nrPDB
Length = 465
Score = 197 bits (501), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 200/365 (54%), Gaps = 37/365 (10%)
Query: 16 GAILLVAMPSLRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNS----- 70
G I + +MP ++ +S P S D+T SY+ +++ + AVVN+ N+
Sbjct: 8 GNIQIQSMPKVKER--VSVP---SKDDTIYSYHDSIKDSIKAVVNISTEKKIKNNFIGGG 62
Query: 71 -------------------HNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQ-D 110
++E R LGSGVI+ + GYI+TN HVI+ AD+I V +
Sbjct: 63 VFNDPFFQQFFGDLGGMIPKERME-RALGSGVIISKDGYIVTNNHVIDGADKIKVTIPGS 121
Query: 111 GRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQ 170
+ + A LVG+DS +DLAV++I LPTI + +GD+V AIGNP+ +G+++TQ
Sbjct: 122 NKEYSATLVGTDSESDLAVIRITKDN-LPTIKFSDSNDISVGDLVFAIGNPFGVGESVTQ 180
Query: 171 GIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPE 230
GI+SA + G+ +NF+QTDASIN GNSGGAL++S G L+GINT K+
Sbjct: 181 GIVSALNKSGIGINSYENFIQTDASINPGNSGGALIDSRGGLVGINTAIISKTGGN---H 237
Query: 231 GIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPD 290
GIGFAIP + + +LI+ G++ RGY+G+G ++++ D +G VV V D
Sbjct: 238 GIGFAIPSNMVKDTVTQLIKTGKIERGYLGVGLQDLSGDLQN--SYDNKEGAVVISVEKD 295
Query: 291 GPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQE 350
PA AGI V DLI V+ K + E + + + P + + V+RD K+ +T+ E
Sbjct: 296 SPAKKAGILVWDLITEVNGKKVKNTNELRNLIGSMLPNQRVTLKVIRDKKERAFTLTLAE 355
Query: 351 YPATN 355
N
Sbjct: 356 RKNPN 360
>5Y28-A nrPDB
Length = 357
Score = 197 bits (501), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 131/360 (36%), Positives = 199/360 (55%), Gaps = 37/360 (10%)
Query: 16 GAILLVAMPSLRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNS----- 70
G I + +MP ++ +S P S D+T SY+ +++ + AVVN+ N+
Sbjct: 8 GNIQIQSMPKVKER--VSVP---SKDDTIYSYHDSIKDSIKAVVNISTEKKIKNNFIGGG 62
Query: 71 -------------------HNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQ-D 110
++E R LGSGVI+ + GYI+TN HVI+ AD+I V +
Sbjct: 63 VFNDPFFQQFFGDLGGMIPKERME-RALGSGVIISKDGYIVTNNHVIDGADKIKVTIPGS 121
Query: 111 GRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQ 170
+ + A LVG+DS +DLAV++I LPTI + +GD+V AIGNP+ +G+++TQ
Sbjct: 122 NKEYSATLVGTDSESDLAVIRITKDN-LPTIKFSDSNDISVGDLVFAIGNPFGVGESVTQ 180
Query: 171 GIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPE 230
GI+SA + G+ +NF+QTDASIN GNSGGAL++S G L+GINT K+
Sbjct: 181 GIVSALNKSGIGINSYENFIQTDASINPGNSGGALIDSRGGLVGINTAIISKTGGN---H 237
Query: 231 GIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPD 290
GIGFAIP + + +LI+ G++ RGY+G+G ++++ D +G VV V D
Sbjct: 238 GIGFAIPSNMVKDTVTQLIKTGKIERGYLGVGLQDLSGDLQN--SYDNKEGAVVISVEKD 295
Query: 291 GPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQE 350
PA AGI V DLI V+ K + E + + + P + + V+RD K+ +T+ E
Sbjct: 296 SPAKKAGILVWDLITEVNGKKVKNTNELRNLIGSMLPNQRVTLKVIRDKKERAFTLTLAE 355
>3PV2-A nrPDB
Length = 451
Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/285 (43%), Positives = 174/285 (61%), Gaps = 15/285 (5%)
Query: 75 EIRTLGSGVIMD-QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKIN 133
+ ++GSGVI+D G IITN HVI +A I V LQDGR +A L+G DS TDLAVLKI+
Sbjct: 74 KFESIGSGVIIDPNNGVIITNDHVIRNASLITVTLQDGRRLKARLIGGDSETDLAVLKID 133
Query: 134 ATGGLPTIPINARRVPHIGDVVLAIGNPYNL-----GQTITQGIISATGRIGLNPTGRQN 188
A L ++ I +GD V+AIGNP+ L Q+ T GI+SA R LN G +N
Sbjct: 134 AKN-LKSLVIGDSDKLEVGDFVVAIGNPFGLNSFGNSQSATFGIVSALKRSDLNIEGVEN 192
Query: 189 FLQTDASINHGNSGGALVNSLGELMGINT--LSFDKSNDGETPEGIGFAIPFQLATKIMD 246
F+QTDA+IN GNSGGALVN+ GEL+GINT LS N GIGFAIP + +
Sbjct: 193 FIQTDAAINPGNSGGALVNAKGELIGINTAILSPYGGN-----VGIGFAIPINMVKDVAQ 247
Query: 247 KLIRDGRVIRGYIGIGGREIAPLHAQGGGI-DQLQGIVVNEVSPDGPAANAGIQVNDLII 305
++I+ G + RG +GI + + P AQ G + QG +V++V+P+ PA AG++ D+I
Sbjct: 248 QIIKFGSIHRGLMGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIIT 307
Query: 306 SVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQE 350
+++ A + ++ +R GS + ++V RD+K LTL + +
Sbjct: 308 QINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTD 352
>3PV4-A nrPDB
Length = 354
Score = 192 bits (489), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/285 (43%), Positives = 174/285 (61%), Gaps = 15/285 (5%)
Query: 75 EIRTLGSGVIMD-QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKIN 133
+ ++GSGVI+D G IITN HVI +A I V LQDGR +A L+G DS TDLAVLKI+
Sbjct: 74 KFESIGSGVIIDPNNGVIITNDHVIRNASLITVTLQDGRRLKARLIGGDSETDLAVLKID 133
Query: 134 ATGGLPTIPINARRVPHIGDVVLAIGNPYNL-----GQTITQGIISATGRIGLNPTGRQN 188
A L ++ I +GD V+AIGNP+ L Q+ T GI+SA R LN G +N
Sbjct: 134 AKN-LKSLVIGDSDKLEVGDFVVAIGNPFGLNSFGNSQSATFGIVSALKRSDLNIEGVEN 192
Query: 189 FLQTDASINHGNSGGALVNSLGELMGINT--LSFDKSNDGETPEGIGFAIPFQLATKIMD 246
F+QTDA+IN GNSGGALVN+ GEL+GINT LS N GIGFAIP + +
Sbjct: 193 FIQTDAAINPGNSGGALVNAKGELIGINTAILSPYGGN-----VGIGFAIPINMVKDVAQ 247
Query: 247 KLIRDGRVIRGYIGIGGREIAPLHAQGGGI-DQLQGIVVNEVSPDGPAANAGIQVNDLII 305
++I+ G + RG +GI + + P AQ G + QG +V++V+P+ PA AG++ D+I
Sbjct: 248 QIIKFGSIHRGLMGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIIT 307
Query: 306 SVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQE 350
+++ A + ++ +R GS + ++V RD+K LTL + +
Sbjct: 308 QINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTD 352
>4YNN-A nrPDB
Length = 448
Score = 191 bits (486), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/283 (42%), Positives = 174/283 (61%), Gaps = 11/283 (3%)
Query: 75 EIRTLGSGVIMD-QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKIN 133
+ ++GSGVI+D + G IITN HVI +A+ I V LQDGR +A L+G DS TDLAVLKI+
Sbjct: 71 KFESIGSGVIIDPKNGIIITNDHVIRNANLITVTLQDGRRLKARLIGGDSETDLAVLKID 130
Query: 134 ATGGLPTIPINARRVPHIGDVVLAIGNPYNL-----GQTITQGIISATGRIGLNPTGRQN 188
A L ++ I +GD V+AIGNP+ L Q+ T GI+SA R LN G +N
Sbjct: 131 AKN-LKSLVIGDSDKLEVGDYVVAIGNPFGLNSFGNSQSATFGIVSALKRSDLNIEGVEN 189
Query: 189 FLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKL 248
F+QTDA+IN GN+GGALVN+ GEL+GINT GIGFAIP +A + ++
Sbjct: 190 FIQTDAAINPGNAGGALVNAKGELIGINTAIISPYGGN---VGIGFAIPINMAKDVAQQI 246
Query: 249 IRDGRVIRGYIGIGGREIAPLHAQGGGI-DQLQGIVVNEVSPDGPAANAGIQVNDLIISV 307
I+ G + RG +GI + + P AQ G + QG +V++V+ + PA AG++ D+I+ +
Sbjct: 247 IKFGSIHRGLMGIFVQHLTPELAQSMGYAEDFQGALVSQVNQNSPAQLAGLKSGDVIVQI 306
Query: 308 DNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQE 350
++ A + ++ +R GS + ++RD+K LTL V + +
Sbjct: 307 NDTKITQATQVKTTISLLRAGSTAKIKILRDNKPLTLDVEVTD 349
>4YO1-A nrPDB
Length = 351
Score = 191 bits (485), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/283 (42%), Positives = 174/283 (61%), Gaps = 11/283 (3%)
Query: 75 EIRTLGSGVIMD-QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKIN 133
+ ++GSGVI+D + G IITN HVI +A+ I V LQDGR +A L+G DS TDLAVLKI+
Sbjct: 71 KFESIGSGVIIDPKNGIIITNDHVIRNANLITVTLQDGRRLKARLIGGDSETDLAVLKID 130
Query: 134 ATGGLPTIPINARRVPHIGDVVLAIGNPYNL-----GQTITQGIISATGRIGLNPTGRQN 188
A L ++ I +GD V+AIGNP+ L Q+ T GI+SA R LN G +N
Sbjct: 131 AKN-LKSLVIGDSDKLEVGDYVVAIGNPFGLNSFGNSQSATFGIVSALKRSDLNIEGVEN 189
Query: 189 FLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKL 248
F+QTDA+IN GN+GGALVN+ GEL+GINT GIGFAIP +A + ++
Sbjct: 190 FIQTDAAINPGNAGGALVNAKGELIGINTAIISPYGGN---VGIGFAIPINMAKDVAQQI 246
Query: 249 IRDGRVIRGYIGIGGREIAPLHAQGGGI-DQLQGIVVNEVSPDGPAANAGIQVNDLIISV 307
I+ G + RG +GI + + P AQ G + QG +V++V+ + PA AG++ D+I+ +
Sbjct: 247 IKFGSIHRGLMGIFVQHLTPELAQSMGYAEDFQGALVSQVNQNSPAQLAGLKSGDVIVQI 306
Query: 308 DNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQE 350
++ A + ++ +R GS + ++RD+K LTL V + +
Sbjct: 307 NDTKITQATQVKTTISLLRAGSTAKIKILRDNKPLTLDVEVTD 349
>5T69-A nrPDB
Length = 367
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 152/280 (54%), Gaps = 20/280 (7%)
Query: 80 GSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATG-GL 138
GSG I+D G I+TN HV++ A +++V L+DGR F+ + G+D +TDLAV+KI G L
Sbjct: 85 GSGFIIDNSGIILTNAHVVDGASKVVVTLRDGRTFDGQVRGTDEVTDLAVVKIEPQGSAL 144
Query: 139 PTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLN---PTGRQNFLQTDAS 195
P P+ +GD +A+GNP L T+T GIIS GR P R F+QTDA+
Sbjct: 145 PVAPLGTSSNLQVGDWAIAVGNPVGLDNTVTLGIISTLGRSAAQAGIPDKRVEFIQTDAA 204
Query: 196 INHGNSGGALVNSLGELMGINT-LSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRV 254
IN GN+GG L+N+ GE++GINT + D + GIGFAIP A I + L G V
Sbjct: 205 INPGNAGGPLLNARGEVIGINTAIRADAT-------GIGFAIPIDQAKAIQNTLAAGGTV 257
Query: 255 IRGYIGIGGREIAPLHAQGGG--------IDQLQGIVVNEVSPDGPAANAGIQVNDLIIS 306
YIG+ I AQ I ++ GI+V V P PA AGI+ D+I++
Sbjct: 258 PHPYIGVQMMNITVDQAQQNNRNPNSPFIIPEVDGILVMRVLPGTPAERAGIRRGDVIVA 317
Query: 307 VDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQV 346
VD P V + + + ++R D++L+L V
Sbjct: 318 VDGTPISDGARLQRIVEQAGLNKALKLDLLRGDRRLSLTV 357
>3STI-A nrPDB
Length = 245
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 117/179 (65%), Gaps = 4/179 (2%)
Query: 79 LGSGVIMD-QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGG 137
LGSGVI++ +GY++TN HVIN A +I + L DGR F+A L+GSD +D+A+L+I
Sbjct: 64 LGSGVIINASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSK 123
Query: 138 LPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASIN 197
L I I +GD +A+GNP+ LGQT T GI+SA GR GLN G +NF+QTDASIN
Sbjct: 124 LTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDASIN 183
Query: 198 HGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIR 256
GNSGGAL+N GEL+GINT G GIGFAIP +A + +LI G ++
Sbjct: 184 RGNSGGALLNLNGELIGINTAILAP---GGGSVGIGFAIPSNMARTLAQQLIDFGEILE 239
>3QO6-A nrPDB
Length = 348
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 185/341 (54%), Gaps = 32/341 (9%)
Query: 32 LSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSH--NQLEI-RTLGSGVIMDQR 88
+STP+ TDE A+ L + P+VV + N + ++ + LE+ + GSG + D++
Sbjct: 6 VSTPKKLQTDEL-ATVRL-FQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQ 63
Query: 89 GYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINA-TGGLPTIPINARR 147
G+I+TN HVI A + V L D F+A +VG D D+AVL+I+A L IP+
Sbjct: 64 GHIVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSA 123
Query: 148 VPHIGDVVLAIGNPYNLGQTITQGIISATGR-IGLNPTGR--QNFLQTDASINHGNSGGA 204
+G V AIGNP+ L T+T G+IS R I TGR Q+ +QTDA+IN GNSGG
Sbjct: 124 DLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGP 183
Query: 205 LVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGR 264
L++S G L+GINT + S G+GF+IP I+D+L+R G+V R +GI
Sbjct: 184 LLDSSGTLIGINTAIYSPSG---ASSGVGFSIPVDTVGGIVDQLVRFGKVTRPILGI--- 237
Query: 265 EIAPLHAQGGGIDQL--QGIVVNEVSPDGPAANAGIQ-----------VNDLIISVDNKP 311
+ AP + ++QL G++V + P GPA AG+Q + D+I SV+
Sbjct: 238 KFAPDQS----VEQLGVSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTK 293
Query: 312 AISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYP 352
+ + + + + G + V V+R D + + VT++ P
Sbjct: 294 VSNGSDLYRILDQCKVGDEVTVEVLRGDHKEKISVTLEPKP 334
>6IEO-A nrPDB
Length = 314
Score = 150 bits (379), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 104/279 (37%), Positives = 150/279 (53%), Gaps = 23/279 (8%)
Query: 80 GSGVIMDQRGYIITNKHVINDAD------QIIVALQDGRVFEALLVGSDSLTDLAVLKIN 133
GSGVI+D RGYI+TN HVI++A + V DG+ A LVG D TDLAVLK++
Sbjct: 32 GSGVIVDGRGYIVTNNHVISEAANNPSQFKTTVVFNDGKEVPANLVGRDPKTDLAVLKVD 91
Query: 134 ATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGR-IGLNPTGRQ----- 187
L + +GD VLA+G P L T+TQGI+SA R + L+ G
Sbjct: 92 NVDNLTVARLGDSSKVRVGDEVLAVGAPLGLRSTVTQGIVSALHRPVPLSGEGSDTDTVI 151
Query: 188 NFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDK 247
+ +QTDASINHGNSGG L++ +++GINT S ++ G+GFAIP + +
Sbjct: 152 DAIQTDASINHGNSGGPLIDMDAQVIGINTAGKSLS---DSASGLGFAIPVNEMKLVANS 208
Query: 248 LIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISV 307
LI+DG+++ +GI R ++ A G V V PA GI ND+I+ V
Sbjct: 209 LIKDGKIVHPTLGISTRSVSNAIASGAQ--------VANVKAGSPAQKGGILENDVIVKV 260
Query: 308 DNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQV 346
N+ + E + V ++ G P+ V+R+ + +TL V
Sbjct: 261 GNRAVADSDEFVVAVRQLAIGQDAPIEVVREGRHVTLTV 299
>4RI0-A nrPDB
Length = 332
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/351 (33%), Positives = 175/351 (49%), Gaps = 70/351 (19%)
Query: 29 LNPLSTPQFDSTDETPASYNL---AVRRAAPAVVNV--------YNRGLNTNSHNQLEIR 77
L+ LS+P++ +N V + APAVV++ + R + +S
Sbjct: 1 LHQLSSPRY--------KFNFIADVVEKIAPAVVHIELFLRHPLFGRNVPLSS------- 45
Query: 78 TLGSGVIMDQRGYIITNKHVIND------ADQIIVALQDGRVFEALLVGSDSLTDLAVLK 131
GSG IM + G IITN HV++ Q+ V LQ+G +EA + D +D+A +K
Sbjct: 46 --GSGFIMSEAGLIITNAHVVSSNSAAPGRQQLKVQLQNGDSYEATIKDIDKKSDIATIK 103
Query: 132 INATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQ---N 188
I+ LP + + G+ V+AIG+P+ L T+T GI+S R G R +
Sbjct: 104 IHPKKKLPVLLLGHSADLRPGEFVVAIGSPFALQNTVTTGIVSTAQREGRELGLRDSDMD 163
Query: 189 FLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIP----FQLATKI 244
++QTDA IN+GN+GG LVN GE++GINTL + GI FAIP + T+
Sbjct: 164 YIQTDAIINYGNAGGPLVNLDGEVIGINTL--------KVTAGISFAIPSDRITRFLTEF 215
Query: 245 MDKLIRDGRVIRGYIGIGGREIAP-----LHAQGGGIDQL-QGIVVNEVSPDGPAANAGI 298
DK I+D + + +IGI R I P L A ++ GI V EV+P+ P+ GI
Sbjct: 216 QDKQIKDWK--KRFIGIRMRTITPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGGI 273
Query: 299 QVNDLIISVDNKPAISALETMDQV-------AEIRPG------SVIPVVVM 336
Q D+I+ V+ +P + + E + V E+R G S+ P VVM
Sbjct: 274 QDGDIIVKVNGRPLVDSSELQEAVLTESPLLLEVRRGNDDLLFSIAPEVVM 324
>3NUM-A nrPDB
Length = 332
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 175/326 (53%), Gaps = 37/326 (11%)
Query: 46 SYNL---AVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD 102
YN V + APAVV++ S ++ + + GSG I+ + G I+TN HV+ +
Sbjct: 12 KYNFIADVVEKIAPAVVHIELFRKLPFSKREVPVAS-GSGFIVSEDGLIVTNAHVVTNKH 70
Query: 103 QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPY 162
++ V L++G +EA + D D+A++KI+ G LP + + G+ V+AIG+P+
Sbjct: 71 RVKVELKNGATYEAKIKDVDEKADIALIKIDHQGKLPVLLLGRSSELRPGEFVVAIGSPF 130
Query: 163 NLGQTITQGIISATGR----IGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTL 218
+L T+T GI+S T R +GL + +++QTDA IN+GN+GG LVN GE++GINTL
Sbjct: 131 SLQNTVTTGIVSTTQRGGKELGLRNSD-MDYIQTDAIINYGNAGGPLVNLDGEVIGINTL 189
Query: 219 SFDKSNDGETPEGIGFAIPF----QLATKIMDKLIRDGRVI--RGYIGI--------GGR 264
+ GI FAIP + T+ D+ + G+ I + YIGI +
Sbjct: 190 --------KVTAGISFAIPSDKIKKFLTESHDRQAK-GKAITKKKYIGIRMMSLTSSKAK 240
Query: 265 EIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAE 324
E+ H D + G + EV PD PA G++ ND+IIS++ + +SA + D
Sbjct: 241 ELKDRHRDFP--DVISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDVSDV--- 295
Query: 325 IRPGSVIPVVVMRDDKQLTLQVTIQE 350
I+ S + +VV R ++ + + V +E
Sbjct: 296 IKRESTLNMVVRRGNEDIMITVIPEE 321
>4IC6-A nrPDB
Length = 368
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 159/297 (53%), Gaps = 32/297 (10%)
Query: 80 GSGVIMDQRGYIITNKHVINDA-----------DQIIVALQDG--RVFEALLVGSDSLTD 126
GSGV+ D +GYI+TN HVI +A ++ + DG + FE LVG+D D
Sbjct: 67 GSGVVWDGQGYIVTNYHVIGNALSRNPSPGDVVGRVNILASDGVQKNFEGKLVGADRAKD 126
Query: 127 LAVLKINATGGL-PTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTG 185
LAVLK++A L I + +G LAIGNP+ T+T G+IS R + TG
Sbjct: 127 LAVLKVDAPETLLKPIKVGQSNSLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQTG 186
Query: 186 RQ--NFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATK 243
+QTDA+IN GN+GG L++S G L+GINT F ++ T G+GFAIP K
Sbjct: 187 VTIGGGIQTDAAINPGNAGGPLLDSKGNLIGINTAIFTQTG---TSAGVGFAIPSSTVLK 243
Query: 244 IMDKLIRDGRVIRGYIGIGGREIAP------LHAQGGG-IDQLQGIVVNE---VSPDGPA 293
I+ +LI+ +V+R I I E+AP L+ + G + Q+ G + E + P
Sbjct: 244 IVPQLIQFSKVLRAGINI---ELAPDPVANQLNVRNGALVLQVPGKSLAEKAGLHPTSRG 300
Query: 294 ANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQE 350
I + D+I++VD+KP + E M + E G + + + R ++ L L+++++E
Sbjct: 301 FAGNIVLGDIIVAVDDKPVKNKAELMKILDEYSVGDKVTLKIKRGNEDLELKISLEE 357
>1L1J-A nrPDB
Length = 239
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 109/193 (56%), Gaps = 8/193 (4%)
Query: 73 QLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKI 132
+ ++ +LGSG I D GYI+TN HV+ AD I V + DG ++A +G D D+AV+KI
Sbjct: 51 ERQVASLGSGFIFDPEGYILTNYHVVGGADNITVTMLDGSKYDAEYIGGDEELDIAVIKI 110
Query: 133 NAT-GGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNF-- 189
A+ P + IG+ +AIGNP T+T G++SAT R P G +
Sbjct: 111 KASDKKFPYLEFGDSDKVKIGEWAIAIGNPLGFQHTVTVGVVSATNRRIPKPDGSGYYVG 170
Query: 190 -LQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKL 248
+QTDA+IN GNSGG L+N GE++GINT + + +GFAIP K +D +
Sbjct: 171 LIQTDAAINPGNSGGPLLNIHGEVIGINTAIVNP----QEAVNLGFAIPINTVKKFLDTI 226
Query: 249 IRDGRVIRGYIGI 261
+ +V + Y+G+
Sbjct: 227 LTQKKVEKAYLGV 239
>2Z9I-A nrPDB
Length = 324
Score = 117 bits (292), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 119/237 (50%), Gaps = 27/237 (11%)
Query: 44 PASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDA-- 101
P S + P+VV L T+ Q E GSG+I+ G I+TN HVI A
Sbjct: 5 PGSVEQVAAKVVPSVVM-----LETDLGRQSE---EGSGIILSAEGLILTNNHVIAAAAK 56
Query: 102 -------DQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDV 154
+ V DGR +VG+D +D+AV+++ GL I + + +G
Sbjct: 57 PPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQP 116
Query: 155 VLAIGNPYNLGQTITQGIISATGR--IGLNPTGRQN----FLQTDASINHGNSGGALVNS 208
VLAIG+P L T+T GI+SA R G QN +QTDA+IN GNSGGALVN
Sbjct: 117 VLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNM 176
Query: 209 LGELMGIN----TLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGI 261
+L+G+N TL D ++ G+GFAIP A +I D+LI G+ +G+
Sbjct: 177 NAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGV 233
>3TJO-A nrPDB
Length = 231
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 15/206 (7%)
Query: 46 SYNL---AVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD 102
YN V + APAVV++ S ++ + + GSG I+ + G I+TN HV+ +
Sbjct: 29 KYNFIADVVEKIAPAVVHIELFRKLPFSKREVPVAS-GSGFIVSEDGLIVTNAHVVTNKH 87
Query: 103 QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPY 162
++ V L++G +EA + D D+A++KI+ G LP + + G+ V+AIG+P+
Sbjct: 88 RVKVELKNGATYEAKIKDVDEKADIALIKIDHQGKLPVLLLGRSSELRPGEFVVAIGSPF 147
Query: 163 NLGQTITQGIISATGRIGLNPTGRQ---NFLQTDASINHGNSGGALVNSLGELMGINTLS 219
+L T+T GI+S T R G R +++QTDA IN+GN+GG LVN GE++GINTL
Sbjct: 148 SLQNTVTTGIVSTTQRGGKELGLRNSDMDYIQTDAIINYGNAGGPLVNLDGEVIGINTL- 206
Query: 220 FDKSNDGETPEGIGFAIPFQLATKIM 245
+ GI FAIP K +
Sbjct: 207 -------KVTAGISFAIPSDKIKKFL 225
>5M3O-A nrPDB
Length = 334
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 165/323 (51%), Gaps = 34/323 (10%)
Query: 45 ASYNL---AVRRAAPAVVNVYNRGLNTNSHNQLEIR-TLGSGVIMDQRGYIITNKHVIND 100
+ YN V + APAVV Y L+ + E+ + GSG ++ G I+TN HV+ D
Sbjct: 13 SQYNFIADVVEKTAPAVV--YIEILDRHPFLGREVPISNGSGFVVAADGLIVTNAHVVAD 70
Query: 101 ADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGN 160
++ V L G +EA++ D + D+A L+I LPT+P+ G+ V+A+G+
Sbjct: 71 RRRVRVRLLSGDTYEAVVTAVDPVADIATLRIQTKEPLPTLPLGRSADVRQGEFVVAMGS 130
Query: 161 PYNLGQTITQGIISATGR----IGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGIN 216
P+ L TIT GI+S+ R +GL P ++QTDA+I+ GNSGG LVN GE++G+N
Sbjct: 131 PFALQNTITSGIVSSAQRPARDLGL-PQTNVEYIQTDAAIDFGNSGGPLVNLDGEVIGVN 189
Query: 217 TLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVI------RGYIGIGGREIAP-- 268
T+ + GI FAIP + + + + R YIG+ ++P
Sbjct: 190 TM--------KVTAGISFAIPSDRLREFLHRGEKKNSSSGISGSQRRYIGVMMLTLSPSI 241
Query: 269 ---LHAQGGGIDQLQ-GIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAE 324
L + +Q G+++++V PA AG++ D+I+++ + +A + + V
Sbjct: 242 LAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAV-- 299
Query: 325 IRPGSVIPVVVMRDDKQLTLQVT 347
R S + V + R + LTL VT
Sbjct: 300 -RTQSQLAVQIRRGRETLTLYVT 321
>4IC5-A nrPDB
Length = 291
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 97/196 (49%), Gaps = 15/196 (7%)
Query: 75 EIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVF-----------EALLVGSDS 123
+I GSG + D+ G+I+TN HVI LQ +V E +VG D
Sbjct: 77 KIEGTGSGFVWDKLGHIVTNYHVIAKLATDQFGLQRCKVSLVDAKGTRFSKEGKIVGLDP 136
Query: 124 LTDLAVLKINATG-GLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLN 182
DLAVLKI G L + + +G AIGNPY T+T G++S GR +
Sbjct: 137 DNDLAVLKIETEGRELNPVVLGTSNDLRVGQSCFAIGNPYGYENTLTIGVVSGLGREIPS 196
Query: 183 PTGRQ--NFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQL 240
P G+ +QTDA IN GN+GG L++S G +G+NT +F + G + G+ FAIP
Sbjct: 197 PNGKSISEAIQTDADINSGNAGGPLLDSYGHTIGVNTATFTRKGSGMS-SGVNFAIPIDT 255
Query: 241 ATKIMDKLIRDGRVIR 256
+ + LI G R
Sbjct: 256 VVRTVPYLIVYGTAYR 271
>5ILB-A nrPDB
Length = 474
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 121/266 (45%), Gaps = 23/266 (8%)
Query: 57 AVVNVYNRGLNTN----SHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQ-DG 111
AVV VY + Q + + GS ++ G ++TN H + Q+ V + D
Sbjct: 9 AVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIGD-GKLLTNAHCVEHDTQVKVKRRGDD 67
Query: 112 RVFEALLVGSDSLTDLAVLKINATGGLP-TIPINARRVPHIGDVVLAIGNPYNLGQTI-- 168
R + A ++ D+A+L + + P+ +P + D V +G P G TI
Sbjct: 68 RKYVAKVLVRGVDCDIALLSVESEDFWKGAEPLRLGHLPRLQDSVTVVGYPLG-GDTISV 126
Query: 169 TQGIISATGRIGLNPTGRQNFL--QTDASINHGNSGGALVNSLGELMGINTLSFDKSNDG 226
T+G++S + G + L Q DA+IN GNSGG N GE +G+ +F
Sbjct: 127 TKGVVSRI-EVTSYAHGSSDLLGIQIDAAINPGNSGGPAFNDQGECIGV---AFQVYRSE 182
Query: 227 ETPEGIGFAIPFQLATKIMDKLIRDGRVIRGY--IGIGGREIA--PLHAQGGGIDQLQGI 282
ET E IG+ IP + + + R+G+ G+ +GI +++ L G +G+
Sbjct: 183 ET-ENIGYVIPTTVVSHFLTDYERNGKYT-GFPVLGIEWQKMENPDLRKSMGMESHQKGV 240
Query: 283 VVNEVSPDGPAANAGIQVNDLIISVD 308
+ + P P + ++ +D+I+S D
Sbjct: 241 RIRRIEPTAPESQV-LKPSDIILSFD 265
>4FLN-A nrPDB
Length = 539
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 120/266 (45%), Gaps = 22/266 (8%)
Query: 57 AVVNVYNRGLNTN----SHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQ-DG 111
AVV VY + Q + + GS ++ G ++TN H + Q+ V + D
Sbjct: 49 AVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIGD-GKLLTNAHCVEHDTQVKVKRRGDD 107
Query: 112 RVFEALLVGSDSLTDLAVLKINATGGLP-TIPINARRVPHIGDVVLAIGNPYNLGQTI-- 168
R + A ++ D+A+L + + P+ +P + D V +G P G TI
Sbjct: 108 RKYVAKVLVRGVDCDIALLSVESEDFWKGAEPLRLGHLPRLQDSVTVVGYPLG-GDTISV 166
Query: 169 TQGIISATGRIGLNPTGRQNFL--QTDASINHGNSGGALVNSLGELMGINTLSFDKSNDG 226
T+G++S + G + L Q DA+IN GNSGG N GE +G+ +F
Sbjct: 167 TKGVVSRI-EVTSYAHGSSDLLGIQIDAAINPGNSGGPAFNDQGECIGV---AFQVYRSE 222
Query: 227 ETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIG---GREIAPLHAQGGGIDQLQGIV 283
ET E IG+ IP + + + R+G+ GY +G + P + + +G++
Sbjct: 223 ET-ENIGYVIPTTVVSHFLTDYERNGKYT-GYPCLGVLLQKLENPALRECLKVPTNEGVL 280
Query: 284 VNEVSPDGPAANAGIQVNDLIISVDN 309
V V P A+ ++ D+I+S D+
Sbjct: 281 VRRVEPTSDASKV-LKEGDVIVSFDD 305
>5HM9-A nrPDB
Length = 189
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 9/164 (5%)
Query: 81 SGVIMDQRGYIITNKHVINDADQIIVALQDG---RVFEALLVGSDSLTDLAVLKINATGG 137
SG I+ GY+IT H ++ +I V + R F A +V + DLA+LK+ T
Sbjct: 24 SGAIVGTNGYVITTLHSVSKLPEISVQVATTGGIRRFPAQVVKTIPGHDLALLKMQTTEK 83
Query: 138 LPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGII-SATGRIGLNPTGRQNFLQTDASI 196
+ + G V A G + QG++ SA + + T + L++DA
Sbjct: 84 FLHFRMADVQTVVPGQQVFAFGRNMAGAPLVRQGLVQSADAPLAVGATQITHLLRSDAVY 143
Query: 197 NHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQL 240
+ +GG LVN+ G+L+GIN + G T + GF +P Q+
Sbjct: 144 SWEQTGGPLVNAQGDLVGINI-----AATGPTGKVEGFTVPAQV 182
>5JYK-A nrPDB
Length = 566
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 104/242 (42%), Gaps = 27/242 (11%)
Query: 81 SGVIMDQRGYIITNKHVINDADQIIVALQ--DGRVFEALL-VGSDSLTDLAVLKINATGG 137
SG I+ R ++TN H + Q+ + + D + +L +G++ D+A+L +
Sbjct: 129 SGFIIGGR-RVLTNAHSVEHHTQVKLKKRGSDTKYLATVLAIGTE--CDIALLTVTDDEF 185
Query: 138 LPTI-PINARRVPHIGDVVLAIGNPYNLGQTI--TQGIISATGRIGLNPTGRQNF-LQTD 193
+ P+ +P + D V +G P G TI T G++S + + LQ D
Sbjct: 186 WEGVSPVEFGDLPALQDAVTVVGYPIG-GDTISVTSGVVSRMEILSYVHGSTELLGLQID 244
Query: 194 ASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGR 253
A+IN GNSGG N G+ +GI S E E IG+ IP T ++ I+D
Sbjct: 245 AAINSGNSGGPAFNDKGKCVGIAFQSLKH----EDAENIGYVIP----TPVIVHFIQDYE 296
Query: 254 VIRGYIGI-------GGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIIS 306
Y G E L G +G+ + + P P + ++ +D+I+S
Sbjct: 297 KHDKYTGFPVLGIEWQKMENPDLRKSMGMESHQKGVRIRRIEPTAPESQV-LKPSDIILS 355
Query: 307 VD 308
D
Sbjct: 356 FD 357
>5ILA-A nrPDB
Length = 301
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 81 SGVIMDQRGYIITNKHVINDADQIIVALQ--DGRVFEALL-VGSDSLTDLAVLKINATGG 137
SG I+ R ++TN H + Q+ + + D + +L +G++ D+A+L +
Sbjct: 129 SGFIIGGR-RVLTNAHSVEHHTQVKLKKRGSDTKYLATVLAIGTE--CDIALLTVTDDEF 185
Query: 138 LPTI-PINARRVPHIGDVVLAIGNPYNLGQTI--TQGIISATGRIGLNPTGRQNF-LQTD 193
+ P+ +P + D V +G P G TI T G++S + + LQ D
Sbjct: 186 WEGVSPVEFGDLPALQDAVTVVGYPIG-GDTISVTSGVVSRMEILSYVHGSTELLGLQID 244
Query: 194 ASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRD 251
A+IN GNSGG N G+ +GI S E E IG+ IP T ++ I+D
Sbjct: 245 AAINSGNSGGPAFNDKGKCVGIAFQSLKH----EDAENIGYVIP----TPVIVHFIQD 294
>4FGM-A nrPDB
Length = 597
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 280 QGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIR-PGSVIPVVVMRD 338
QG+ V V D A +AG+ D II++D+ A +++ ++ E PG + + R
Sbjct: 496 QGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQATE--QSVKRILERYIPGDTVTIHAFRR 553
Query: 339 DKQLTLQVTIQEYPATN 355
D+ +TL++T QE PA +
Sbjct: 554 DELMTLELTWQE-PAKS 569
>2KJP-A nrPDB
Length = 91
Score = 37.4 bits (85), Expect = 0.010, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 281 GIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDK 340
GI + V + PA I+V D IIS D K SA + +D ++ + G + + + R++K
Sbjct: 2 GIYASSVVENMPA-KGKIEVGDKIISADGKNYQSAEKLIDYISSKKAGDKVTLKIEREEK 60
Query: 341 QLTLQVTIQEYP 352
+ + +T++++P
Sbjct: 61 EKRVTLTLKQFP 72
>5C2Z-A nrPDB
Length = 255
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 39/169 (23%)
Query: 77 RTLGSGVIMDQRGYIITNKHVI----NDADQIIVALQDGRVFEALLVG-------SDSL- 124
+T+ +G+++ + +ITNKH+ ND +++I R +L+V ++ +
Sbjct: 54 KTIATGILIG-KNTVITNKHIARLAENDPNKVIFTPGSTRDEGSLVVKKPFGEFIAEEIN 112
Query: 125 -------TDLAVLKIN------ATGGLPT---IPINARRVPHIGDVVLAIGNPYNLGQTI 168
TDL+++K+ + G L T IP N GD + +G PYN T
Sbjct: 113 EAPYGGGTDLSIIKLKPNQYGKSAGDLVTPAAIPDNVDV--QKGDKISLLGYPYN---TS 167
Query: 169 TQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINT 217
T + + + N T Q A GNSG + N GEL+GI++
Sbjct: 168 THSLYKSQIEVFNNQT-----FQYFAYTEPGNSGSGIFNLHGELVGIHS 211
>2VZ5-A nrPDB
Length = 139
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 17/91 (18%)
Query: 273 GGGIDQL------------QGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMD 320
GGGIDQ +GI V VS GPA AG+Q+ D I+ V+ + T D
Sbjct: 45 GGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDM--TMVTHD 102
Query: 321 QVAE---IRPGSVIPVVVMRDDKQLTLQVTI 348
Q + R V+ ++V R Q +Q ++
Sbjct: 103 QARKRLTKRSEEVVRLLVTRQSLQKAVQQSM 133
>3LT3-A nrPDB
Length = 217
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 16/174 (9%)
Query: 48 NLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVA 107
N V P+VV + R L LE G+G ++ ++TN HV+ ++ + V
Sbjct: 14 NPVVAATEPSVVKI--RSLAPRCQKVLE----GTGFVISPD-RVMTNAHVVAGSNNVTVY 66
Query: 108 LQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQT 167
D + FEA +V D D+A+L + P + A G V+ +G P T
Sbjct: 67 AGD-KPFEATVVSYDPSVDVAILAVPHLPPPPLV--FAAEPAKTGADVVVLGYPGGGNFT 123
Query: 168 ITQGIISATGRI-GLNPTGRQNFLQTD-----ASINHGNSGGALVNSLGELMGI 215
T I R+ G + G + D A + G++GG L++ G+++G+
Sbjct: 124 ATPARIREAIRLSGPDIYGDPEPVTRDVYTIRADVEQGDAGGPLIDLNGQVLGV 177
>2L4S-A nrPDB
Length = 124
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 17/91 (18%)
Query: 273 GGGIDQL------------QGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMD 320
GGGIDQ +GI V VS GPA AG+Q+ D I+ V+ + T D
Sbjct: 34 GGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDM--TMVTHD 91
Query: 321 QVAE---IRPGSVIPVVVMRDDKQLTLQVTI 348
Q + R V+ ++V R Q +Q ++
Sbjct: 92 QARKRLTKRSEEVVRLLVTRQSLQKAVQQSM 122
>1VRA-B nrPDB
Length = 215
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 26/118 (22%)
Query: 188 NFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDG-----------------ETPE 230
+F+ TDA+I+HG+ GAL E T+ D S + E P+
Sbjct: 4 SFVTTDANIDHGHLQGALSAITNETFNRITVDGDTSTNDMVVVMASGLAENETLTPEHPD 63
Query: 231 GIGFAIPFQLATKIMDKLI-RDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEV 287
F QLA + + K I RDG G ++ + G DQ G+V ++
Sbjct: 64 WANFYKALQLACEDLAKQIARDGE--------GATKLIEVEVTGAANDQEAGMVAKQI 113
>4O06-A nrPDB
Length = 106
Score = 30.8 bits (68), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 284 VNEVSPDGPAANAGIQVNDLIISVDNKPAI--SALETMDQVAEIRPGSVIPVVVMRDDKQ 341
++EV P P+ A I+V+D +IS+ N A S L+ + V +PV+++R+ +
Sbjct: 23 ISEVVPGSPSDKADIKVDDKLISIGNVHAANHSKLQNIQMVVMKNEDRPLPVLLLREGQI 82
Query: 342 LTLQVT 347
L +T
Sbjct: 83 LKTSLT 88
>5KAY-A nrPDB
Length = 201
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 42 ETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIR 77
+TP N + A A ++ NRGL + HN LE+R
Sbjct: 153 KTPVEGNNVEKEKAAAAIDKTNRGLKNSLHNVLEVR 188
>6A9U-A nrPDB
Length = 455
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 275 GIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMD--QVAEIRPGSVIP 332
GID++ G V ++ P N G+ V+D+ P +S E + QV I PG IP
Sbjct: 342 GIDKVSGWNVEKLYPHYIGHNLGLDVHDV-------PKVSRYEPLKVGQVITIEPGLYIP 394
>1WCZ-A nrPDB
Length = 268
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 22/155 (14%)
Query: 79 LGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSD----SLTDLAVLKINA 134
+ SGV++ + ++TNKHV++ AL + F + + + T + K +
Sbjct: 35 IASGVVVG-KDTLLTNKHVVDATHGDPHAL---KAFPSAINQDNYPNGGFTAEQITKYSG 90
Query: 135 TGGLPTIPINA-RRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNP-------TGR 186
G L + + + HIG+VV N + Q I + TG G P G+
Sbjct: 91 EGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQVNQNI-TVTGYPGDKPVATMWESKGK 149
Query: 187 QNFL-----QTDASINHGNSGGALVNSLGELMGIN 216
+L Q D S GNSG + N E++GI+
Sbjct: 150 ITYLKGEAMQYDLSTTGGNSGSPVFNEKNEVIGIH 184
>4C2G-A nrPDB
Length = 446
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 287 VSP--DGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIR--PGSVIPVVVMR--DDK 340
VSP PA AG++ ND IIS+ N +++ + V +IR GS + + + R K
Sbjct: 86 VSPFKKSPAEKAGLKPNDEIISI-NGESMAGKDLNHAVLKIRGKKGSSVSMKIQRPGTKK 144
Query: 341 QLTLQVTIQEYP 352
QL+ ++ E P
Sbjct: 145 QLSFRIKRAEIP 156
>2AS9-A nrPDB
Length = 210
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 143 INARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSG 202
N + + D + IG P + Q +TG I + N L DA I GNSG
Sbjct: 105 FNFAKDAKVDDKIKVIGYPLPAQNSFKQ--FESTGTI---KRIKDNILNFDAYIEPGNSG 159
Query: 203 GALVNSLGELMGI 215
++NS E++G+
Sbjct: 160 SPVLNSNNEVIGV 172
>1DT2-A nrPDB
Length = 245
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 67/167 (40%), Gaps = 39/167 (23%)
Query: 78 TLGSGVIMDQRGYIITNKHVINDADQ----IIVALQDGR------------VFEALLVGS 121
TL +GV++ + I+TN HV +A + II R FEA +
Sbjct: 47 TLATGVLIG-KNTIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKE 105
Query: 122 DSL---TDLAVLKI--NATGGLPTIPINARRVP-HI----GDVVLAIGNPYNL-GQTITQ 170
DLA++K+ N G I +P HI GD +G PYN ++ Q
Sbjct: 106 SPYGQGLDLAIIKLKPNEKGESAGDLIQPANIPDHIDIQKGDKYSLLGYPYNYSAYSLYQ 165
Query: 171 GIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINT 217
I Q F T+ GNSG + N GEL+GI++
Sbjct: 166 SQIEMF-------NDSQYFGYTEV----GNSGSGIFNLKGELIGIHS 201
>2V90-A nrPDB
Length = 96
Score = 28.5 bits (62), Expect = 5.2, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 275 GIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIR-PGSVIPV 333
G+D G + EV P PA AG+Q D +++V + ++ L + V+ I+ GS + +
Sbjct: 25 GLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGE-SVEGLGHEETVSRIQGQGSCVSL 83
Query: 334 VVM 336
V+
Sbjct: 84 TVV 86
>5JWG-A nrPDB
Length = 703
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 188 NFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDG 226
NF T + GN+G ++N+ GEL+G+N FD++ +G
Sbjct: 620 NFCATTHTTG-GNAGSPVMNARGELIGLN---FDRNWEG 654
>2W7U-A nrPDB
Length = 200
Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 151 IGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLG 210
+ D + IG P G + +TG I + +G F++ DA GNSG ++NS
Sbjct: 109 VKDRISVIGYP--KGAQTKYKMFESTGTIN-HISG--TFMEFDAYAQPGNSGSPVLNSKH 163
Query: 211 ELMGI 215
EL+GI
Sbjct: 164 ELIGI 168
>5MM8-A nrPDB
Length = 204
Score = 28.1 bits (61), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 186 RQNFLQTDASINHGNSGGALVNSLGELMGIN 216
+ N + TDA + GNSG A+ NS E++G++
Sbjct: 142 KGNMIITDAFVEPGNSGSAVFNSKYEVVGVH 172
>3WYB-A nrPDB
Length = 334
Score = 28.1 bits (61), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 114 FEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNL-GQTITQGI 172
F+A+ ++ +A++ + GL ++ R+ +G+VVL +GN Y G+ ++QG
Sbjct: 103 FDAVNAAAEQSGKVAIISVGWDPGLFSL----NRL--LGEVVLPVGNTYTFWGKGVSQGH 156
Query: 173 ISATGRIGLNPTGRQNFLQTDASINHGNSG 202
A RI Q + D ++N SG
Sbjct: 157 SDAIRRIQGVKNAVQYTIPIDEAVNRVRSG 186
>4K1S-A nrPDB
Length = 206
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 194 ASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGF 234
A GNSG ++NS EL+GI+ S K++D G+ F
Sbjct: 152 AHTESGNSGSPVLNSNNELVGIHFASDVKNDDNRNAYGVYF 192
>4XZY-A nrPDB
Length = 720
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 3/28 (10%)
Query: 199 GNSGGALVNSLGELMGINTLSFDKSNDG 226
GNSG ++N+ GEL+G+N FD++ +G
Sbjct: 653 GNSGSPVMNANGELIGLN---FDRNWEG 677
>4DLL-A nrPDB
Length = 320
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 101 ADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGL 138
A+Q+IV + G V EALL + D+A +K TGG
Sbjct: 201 ANQMIVGITIGAVAEALLFATKGGADMAKVKEAITGGF 238
>1FC9-A nrPDB
Length = 388
Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 282 IVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMD 320
+VV +P GPA AG + D+I++VD A+ L D
Sbjct: 101 VVVLTPAPGGPAEKAGARAGDVIVTVDGT-AVKGLSLYD 138
>3EGH-C nrPDB
Length = 170
Score = 27.3 bits (59), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 275 GIDQLQGIVVNEVSPDGPAANAG-IQVNDLIISVD 308
G+++L GI V V+ G A G IQVNDL++ VD
Sbjct: 107 GLEKL-GIFVKTVTEGGAAHRDGRIQVNDLLVEVD 140
>5ZDS-A nrPDB
Length = 96
Score = 27.3 bits (59), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 9/54 (16%)
Query: 281 GIVVNEVSPDGPAANAG-IQVNDLIISVD--------NKPAISALETMDQVAEI 325
GI V + P GPAA G I D ++ VD +K A+ L+ QVA +
Sbjct: 37 GIYVKSIIPGGPAAKEGQILQGDRLLQVDGVSLCGLTHKQAVQCLKGPGQVARL 90
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
3GCO-A nrPDB 429 e-120
5JD8-A nrPDB 356 9e-99
5Y2D-A nrPDB 342 1e-94
5Y28-A nrPDB 333 5e-92
3STJ-A nrPDB 327 4e-90
3MH6-A nrPDB 326 8e-90
4A8B-A nrPDB 326 8e-90
4YNN-A nrPDB 316 1e-86
2QF3-A nrPDB 316 1e-86
3PV2-A nrPDB 314 3e-86
3PV4-A nrPDB 310 6e-85
4YO1-A nrPDB 309 9e-85
3QO6-A nrPDB 303 7e-83
3NUM-A nrPDB 299 1e-81
4RI0-A nrPDB 293 7e-80
5T69-A nrPDB 291 3e-79
2R3U-A nrPDB 281 2e-76
5M3O-A nrPDB 273 8e-74
4FLN-A nrPDB 270 7e-73
5ILB-A nrPDB 269 1e-72
4IC6-A nrPDB 268 3e-72
6IEO-A nrPDB 257 6e-69
5JYK-A nrPDB 243 7e-65
1L1J-A nrPDB 235 2e-62
3STI-A nrPDB 234 4e-62
3TJO-A nrPDB 232 1e-61
2Z9I-A nrPDB 216 2e-56
4IC5-A nrPDB 206 9e-54
5ILA-A nrPDB 186 2e-47
5HM9-A nrPDB 158 4e-39
Sequences not found previously or not previously below threshold:
3LT3-A nrPDB 73 1e-13
1DUE-A nrPDB 60 2e-09
4INK-A nrPDB 59 3e-09
2KL1-A nrPDB 57 1e-08
5MM8-A nrPDB 56 3e-08
2AS9-A nrPDB 54 1e-07
4JCN-A nrPDB 52 3e-07
2KJP-A nrPDB 51 7e-07
4JJ3-A nrPDB 50 1e-06
1DT2-A nrPDB 50 2e-06
4QL6-A nrPDB 49 3e-06
2W7U-A nrPDB 49 4e-06
1WCZ-A nrPDB 48 6e-06
3I1E-A nrPDB 48 6e-06
2KJK-A nrPDB 48 7e-06
4K1S-A nrPDB 47 9e-06
5C2Z-A nrPDB 46 2e-05
3I18-A nrPDB 45 6e-05
4FGM-A nrPDB 44 1e-04
5E6P-B nrPDB 44 1e-04
2DLS-A nrPDB 43 2e-04
4C2G-A nrPDB 42 3e-04
4O06-A nrPDB 42 3e-04
2XKX-A nrPDB 42 6e-04
2EAQ-A nrPDB 41 6e-04
2PKT-A nrPDB 41 7e-04
2HLC-A nrPDB 40 0.001
1UEZ-A nrPDB 40 0.002
1FC9-A nrPDB 39 0.003
2V90-A nrPDB 39 0.003
2L4S-A nrPDB 39 0.004
2VZ5-A nrPDB 38 0.006
2QBW-A nrPDB 38 0.007
3K1R-A nrPDB 38 0.007
3CH8-A nrPDB 38 0.007
3TSW-A nrPDB 37 0.009
3SHW-A nrPDB 37 0.009
1MFG-A nrPDB 37 0.012
1M5Z-A nrPDB 37 0.014
3CYY-A nrPDB 37 0.015
4Q2Q-A nrPDB 37 0.015
5G1D-A nrPDB 37 0.015
2KBS-A nrPDB 37 0.017
5N7D-A nrPDB 37 0.017
5A2P-A nrPDB 37 0.018
1X5N-A nrPDB 36 0.020
5ZDS-A nrPDB 36 0.022
3TSV-A nrPDB 36 0.024
1UEQ-A nrPDB 36 0.028
1UF1-A nrPDB 35 0.035
4XZY-A nrPDB 35 0.038
3SHU-A nrPDB 35 0.043
1NPM-A nrPDB 35 0.045
3BPU-A nrPDB 35 0.051
2LOB-A nrPDB 35 0.059
5JXF-A nrPDB 34 0.073
5JWG-A nrPDB 34 0.078
3K50-A nrPDB 34 0.079
2RCZ-A nrPDB 34 0.085
2DC2-A nrPDB 34 0.11
2R4H-A nrPDB 34 0.11
3WOM-A nrPDB 34 0.11
4JOF-A nrPDB 34 0.12
3G8Q-A nrPDB 34 0.13
3SOE-A nrPDB 34 0.14
5HJ1-A nrPDB 34 0.15
2LC7-A nrPDB 34 0.16
3H7F-A nrPDB 33 0.18
1RY4-A nrPDB 33 0.19
3QDO-A nrPDB 33 0.19
2QT5-A nrPDB 33 0.20
3WYB-A nrPDB 33 0.23
2D8I-A nrPDB 33 0.23
1NF3-C nrPDB 32 0.31
1UJV-A nrPDB 32 0.31
2JIL-A nrPDB 32 0.34
1WFV-A nrPDB 32 0.34
6FAH-A nrPDB 32 0.47
4NXP-A nrPDB 32 0.50
1U3B-A nrPDB 31 0.68
1X5R-A nrPDB 31 0.74
2I6V-A nrPDB 31 0.79
2WV5-A nrPDB 31 0.84
1CT4-E nrPDB 31 0.88
2I4S-A nrPDB 31 0.97
2SGA-A nrPDB 31 1.0
1PQ7-A nrPDB 30 1.1
3SUZ-A nrPDB 30 1.1
1U37-A nrPDB 30 1.2
1ZZM-A nrPDB 30 1.5
4OEP-A nrPDB 30 1.8
2SFA-A nrPDB 30 1.8
1Y7N-A nrPDB 30 1.9
5MV8-B nrPDB 30 2.1
3EGH-C nrPDB 30 2.1
1UEW-A nrPDB 30 2.3
2WV9-A nrPDB 29 2.5
1V6B-A nrPDB 29 2.5
3GX9-A nrPDB 29 3.0
2WZQ-A nrPDB 29 3.4
1YJS-A nrPDB 29 3.7
1U39-A nrPDB 29 4.4
1AZZ-A nrPDB 29 4.5
1GBE-A nrPDB 29 5.1
3NK6-A nrPDB 28 5.4
1V62-A nrPDB 28 5.9
6N4D-A nrPDB 28 6.9
3BSF-A nrPDB 28 7.5
1P3E-A nrPDB 28 8.6
>3GCO-A nrPDB
Length = 340
Score = 429 bits (1103), Expect = e-120, Method: Composition-based stats.
Identities = 327/329 (99%), Positives = 327/329 (99%)
Query: 27 RSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMD 86
RSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMD
Sbjct: 12 RSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMD 71
Query: 87 QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINAR 146
QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINAR
Sbjct: 72 QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINAR 131
Query: 147 RVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALV 206
RVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASIN GNSGGALV
Sbjct: 132 RVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINPGNSGGALV 191
Query: 207 NSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREI 266
NSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREI
Sbjct: 192 NSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREI 251
Query: 267 APLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIR 326
APLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETM QVAEIR
Sbjct: 252 APLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMAQVAEIR 311
Query: 327 PGSVIPVVVMRDDKQLTLQVTIQEYPATN 355
PGSVIPVVVMRDDKQLTLQVTIQEYPATN
Sbjct: 312 PGSVIPVVVMRDDKQLTLQVTIQEYPATN 340
>5JD8-A nrPDB
Length = 334
Score = 356 bits (913), Expect = 9e-99, Method: Composition-based stats.
Identities = 229/310 (73%), Positives = 266/310 (85%), Gaps = 2/310 (0%)
Query: 41 DETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVIND 100
+E P SYN AVRRAAPAVVNVYNR L+ + L IRTLGSGVIM +GYI+TNKHVIND
Sbjct: 14 EEVPTSYNQAVRRAAPAVVNVYNRSLSA-TQQGLAIRTLGSGVIMSDKGYILTNKHVIND 72
Query: 101 ADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGN 160
A+QIIVA+Q+GR+ EALLVGSD+LTDLAVLKI+AT LP IPIN R PHIGDVVLAIGN
Sbjct: 73 AEQIIVAMQNGRISEALLVGSDNLTDLAVLKIDATN-LPVIPININRTPHIGDVVLAIGN 131
Query: 161 PYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSF 220
PYNLGQT+TQGIISATGRIGL+ +GRQNFLQTDASIN GNSGGALVN+LGELMGINTLSF
Sbjct: 132 PYNLGQTVTQGIISATGRIGLSSSGRQNFLQTDASINQGNSGGALVNTLGELMGINTLSF 191
Query: 221 DKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQ 280
DKSN+GETPEGIGFAIP LATK+M+KLIRDGRVIRGYIGI G E P +A G D++
Sbjct: 192 DKSNNGETPEGIGFAIPTALATKVMEKLIRDGRVIRGYIGITGEEYPPFNANDNGSDRVH 251
Query: 281 GIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDK 340
GI V +VSPDGPAA AGI V D+I++V+NKPA S +ETMDQVAE+RPG+ IPV+++R+ +
Sbjct: 252 GIKVKKVSPDGPAAQAGIHVGDIILNVNNKPATSVIETMDQVAEVRPGTTIPVLLLRNGQ 311
Query: 341 QLTLQVTIQE 350
Q+ +Q+TI E
Sbjct: 312 QIAVQITITE 321
>5Y2D-A nrPDB
Length = 465
Score = 342 bits (877), Expect = 1e-94, Method: Composition-based stats.
Identities = 131/364 (35%), Positives = 198/364 (54%), Gaps = 35/364 (9%)
Query: 16 GAILLVAMPSLRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSH---- 71
G I + +MP ++ +S P S D+T SY+ +++ + AVVN+ N+
Sbjct: 8 GNIQIQSMPKVKER--VSVP---SKDDTIYSYHDSIKDSIKAVVNISTEKKIKNNFIGGG 62
Query: 72 -------------------NQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQ-DG 111
+ R LGSGVI+ + GYI+TN HVI+ AD+I V +
Sbjct: 63 VFNDPFFQQFFGDLGGMIPKERMERALGSGVIISKDGYIVTNNHVIDGADKIKVTIPGSN 122
Query: 112 RVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQG 171
+ + A LVG+DS +DLAV++I LPTI + +GD+V AIGNP+ +G+++TQG
Sbjct: 123 KEYSATLVGTDSESDLAVIRI-TKDNLPTIKFSDSNDISVGDLVFAIGNPFGVGESVTQG 181
Query: 172 IISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEG 231
I+SA + G+ +NF+QTDASIN GNSGGAL++S G L+GINT K+ G
Sbjct: 182 IVSALNKSGIGINSYENFIQTDASINPGNSGGALIDSRGGLVGINTAIISKTGGN---HG 238
Query: 232 IGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDG 291
IGFAIP + + +LI+ G++ RGY+G+G ++++ D +G VV V D
Sbjct: 239 IGFAIPSNMVKDTVTQLIKTGKIERGYLGVGLQDLSGDLQN--SYDNKEGAVVISVEKDS 296
Query: 292 PAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEY 351
PA AGI V DLI V+ K + E + + + P + + V+RD K+ +T+ E
Sbjct: 297 PAKKAGILVWDLITEVNGKKVKNTNELRNLIGSMLPNQRVTLKVIRDKKERAFTLTLAER 356
Query: 352 PATN 355
N
Sbjct: 357 KNPN 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 260 GIGGREIAPLHAQGGGI-DQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALET 318
G+ ++ + + D +QG++V++V+ + PA AG + ++I ++ S +
Sbjct: 377 GLQVEDLTQETKRSMRLSDDVQGVLVSQVNENSPAEQAGFRQGNIITKIEEVEVKSVADF 436
Query: 319 MDQVAEIR 326
+ + +
Sbjct: 437 NHALEKYK 444
>5Y28-A nrPDB
Length = 357
Score = 333 bits (855), Expect = 5e-92, Method: Composition-based stats.
Identities = 130/361 (36%), Positives = 197/361 (54%), Gaps = 35/361 (9%)
Query: 16 GAILLVAMPSLRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSH---- 71
G I + +MP ++ +S P S D+T SY+ +++ + AVVN+ N+
Sbjct: 8 GNIQIQSMPKVKER--VSVP---SKDDTIYSYHDSIKDSIKAVVNISTEKKIKNNFIGGG 62
Query: 72 -------------------NQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQ-DG 111
+ R LGSGVI+ + GYI+TN HVI+ AD+I V +
Sbjct: 63 VFNDPFFQQFFGDLGGMIPKERMERALGSGVIISKDGYIVTNNHVIDGADKIKVTIPGSN 122
Query: 112 RVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQG 171
+ + A LVG+DS +DLAV++I LPTI + +GD+V AIGNP+ +G+++TQG
Sbjct: 123 KEYSATLVGTDSESDLAVIRI-TKDNLPTIKFSDSNDISVGDLVFAIGNPFGVGESVTQG 181
Query: 172 IISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEG 231
I+SA + G+ +NF+QTDASIN GNSGGAL++S G L+GINT K+ G
Sbjct: 182 IVSALNKSGIGINSYENFIQTDASINPGNSGGALIDSRGGLVGINTAIISKTGGN---HG 238
Query: 232 IGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDG 291
IGFAIP + + +LI+ G++ RGY+G+G ++++ D +G VV V D
Sbjct: 239 IGFAIPSNMVKDTVTQLIKTGKIERGYLGVGLQDLSGDLQN--SYDNKEGAVVISVEKDS 296
Query: 292 PAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEY 351
PA AGI V DLI V+ K + E + + + P + + V+RD K+ +T+ E
Sbjct: 297 PAKKAGILVWDLITEVNGKKVKNTNELRNLIGSMLPNQRVTLKVIRDKKERAFTLTLAER 356
Query: 352 P 352
Sbjct: 357 K 357
>3STJ-A nrPDB
Length = 345
Score = 327 bits (839), Expect = 4e-90, Method: Composition-based stats.
Identities = 130/335 (38%), Positives = 185/335 (55%), Gaps = 21/335 (6%)
Query: 33 STPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHN-----------------QLE 75
S P + S + + PAVV+V G +
Sbjct: 1 SIPGQVADQAPLPSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQP 60
Query: 76 IRTLGSGVIMD-QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINA 134
LGSGVI++ +GY++TN HVIN A +I + L DGR F+A L+GSD +D+A+L+I
Sbjct: 61 FEGLGSGVIINASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQN 120
Query: 135 TGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDA 194
L I I +GD +A+GNP+ LGQT T GI+SA GR GLN G +NF+QTDA
Sbjct: 121 PSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDA 180
Query: 195 SINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRV 254
SIN GNSGGAL+N GEL+GINT G GIGFAIP +A + +LI G +
Sbjct: 181 SINRGNSGGALLNLNGELIGINTAILAP---GGGSVGIGFAIPSNMARTLAQQLIDFGEI 237
Query: 255 IRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAIS 314
RG +GI G E++ A+ +D +G V+EV P +A AG++ D+I S++ KP S
Sbjct: 238 KRGLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNS 297
Query: 315 ALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQ 349
E ++A PG+ + + ++R+ K L ++VT+
Sbjct: 298 FAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLD 332
>3MH6-A nrPDB
Length = 456
Score = 326 bits (836), Expect = 8e-90, Method: Composition-based stats.
Identities = 124/338 (36%), Positives = 186/338 (55%), Gaps = 14/338 (4%)
Query: 23 MPSLRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTN---------SHNQ 73
MPS+ S+N + +T P ++ +P + Q
Sbjct: 23 MPSVVSIN-VEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQ 81
Query: 74 LEIRTLGSGVIMD-QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKI 132
+ LGSGVI+D +GY++TN HV+++A I V L DGR F+A +VG D +D+A+++I
Sbjct: 82 QKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQI 141
Query: 133 NATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQT 192
L I + +GD +AIGNP+ LG+T+T GI+SA GR GLN +NF+QT
Sbjct: 142 QNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQT 201
Query: 193 DASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDG 252
DA+IN GNSGGALVN GEL+GINT GIGFAIP + + +++ G
Sbjct: 202 DAAINRGNSGGALVNLNGELIGINTAILAPDGGN---IGIGFAIPSNMVKNLTSQMVEYG 258
Query: 253 RVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPA 312
+V RG +GI G E+ A+ +D +G V++V P+ AA AGI+ D+I S++ KP
Sbjct: 259 QVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPI 318
Query: 313 ISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQE 350
S QV + GS + + ++RD KQ+ + + +Q+
Sbjct: 319 SSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQ 356
Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 271 AQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSV 330
A+ + QG+VVN V PAA G++ D+II + + + E + SV
Sbjct: 374 AEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKP--SV 431
Query: 331 IPVVVMRDDKQLTL 344
+ + + R D + L
Sbjct: 432 LALNIQRGDSTIYL 445
>4A8B-A nrPDB
Length = 436
Score = 326 bits (836), Expect = 8e-90, Method: Composition-based stats.
Identities = 129/335 (38%), Positives = 185/335 (55%), Gaps = 21/335 (6%)
Query: 33 STPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHN-----------------QLE 75
S P + S + + PAVV+V G +
Sbjct: 1 SIPGQVADQAPLPSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQP 60
Query: 76 IRTLGSGVIMD-QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINA 134
LGSGVI++ +GY++TN HVIN A +I + L DGR F+A L+GSD +D+A+L+I
Sbjct: 61 FEGLGSGVIINASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQN 120
Query: 135 TGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDA 194
L I I +GD +A+GNP+ LGQT T GI+SA GR GLN G +NF+QTDA
Sbjct: 121 PSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDA 180
Query: 195 SINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRV 254
SIN GN+GGAL+N GEL+GINT G GIGFAIP +A + +LI G +
Sbjct: 181 SINRGNAGGALLNLNGELIGINTAILAP---GGGSVGIGFAIPSNMARTLAQQLIDFGEI 237
Query: 255 IRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAIS 314
RG +GI G E++ A+ +D +G V+EV P +A AG++ D+I S++ KP S
Sbjct: 238 KRGLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNS 297
Query: 315 ALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQ 349
E ++A PG+ + + ++R+ K L ++VT+
Sbjct: 298 FAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLD 332
Score = 48.2 bits (113), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 261 IGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMD 320
+ G ++ + GG +GI ++EV PAA AG+Q +D+II V+ S E
Sbjct: 348 LEGATLSDGQLKDGG----KGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRK 403
Query: 321 QVAEIRPGSVIPVVVMRDDKQLTLQVTIQ 349
+A ++I + ++R ++ + L + ++
Sbjct: 404 VLAAKP--AIIALQIVRGNESIYLLMRLE 430
>4YNN-A nrPDB
Length = 448
Score = 316 bits (809), Expect = 1e-86, Method: Composition-based stats.
Identities = 127/329 (38%), Positives = 186/329 (56%), Gaps = 32/329 (9%)
Query: 50 AVRRAAPAVVNVYNRGLNTN---------------------SHNQLEIRTLGSGVIMD-Q 87
++ A PA+VNV +G N + ++GSGVI+D +
Sbjct: 25 VLKNAMPAIVNVAVQGYLPNNMASGNADDDDGENSKQPSRIPEKGRKFESIGSGVIIDPK 84
Query: 88 RGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARR 147
G IITN HVI +A+ I V LQDGR +A L+G DS TDLAVLKI+A L ++ I
Sbjct: 85 NGIIITNDHVIRNANLITVTLQDGRRLKARLIGGDSETDLAVLKIDAKN-LKSLVIGDSD 143
Query: 148 VPHIGDVVLAIGNPYNL-----GQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSG 202
+GD V+AIGNP+ L Q+ T GI+SA R LN G +NF+QTDA+IN GN+G
Sbjct: 144 KLEVGDYVVAIGNPFGLNSFGNSQSATFGIVSALKRSDLNIEGVENFIQTDAAINPGNAG 203
Query: 203 GALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIG 262
GALVN+ GEL+GINT GIGFAIP +A + ++I+ G + RG +GI
Sbjct: 204 GALVNAKGELIGINTAIISPYGGN---VGIGFAIPINMAKDVAQQIIKFGSIHRGLMGIF 260
Query: 263 GREIAPLHAQGGGI-DQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQ 321
+ + P AQ G + QG +V++V+ + PA AG++ D+I+ +++ A +
Sbjct: 261 VQHLTPELAQSMGYAEDFQGALVSQVNQNSPAQLAGLKSGDVIVQINDTKITQATQVKTT 320
Query: 322 VAEIRPGSVIPVVVMRDDKQLTLQVTIQE 350
++ +R GS + ++RD+K LTL V + +
Sbjct: 321 ISLLRAGSTAKIKILRDNKPLTLDVEVTD 349
Score = 38.1 bits (87), Expect = 0.006, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Query: 290 DGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVT 347
AG++ D+IIS + P E G + V V+R L L +
Sbjct: 393 TSAGWRAGLRPGDIIISANKTPVKDIKSLQAVAHE--KGKQLLVQVLRGAGALYLLII 448
>2QF3-A nrPDB
Length = 243
Score = 316 bits (809), Expect = 1e-86, Method: Composition-based stats.
Identities = 230/230 (100%), Positives = 230/230 (100%)
Query: 27 RSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMD 86
RSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMD
Sbjct: 14 RSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMD 73
Query: 87 QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINAR 146
QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINAR
Sbjct: 74 QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINAR 133
Query: 147 RVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALV 206
RVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALV
Sbjct: 134 RVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALV 193
Query: 207 NSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIR 256
NSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIR
Sbjct: 194 NSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIR 243
>3PV2-A nrPDB
Length = 451
Score = 314 bits (805), Expect = 3e-86, Method: Composition-based stats.
Identities = 127/336 (37%), Positives = 182/336 (54%), Gaps = 36/336 (10%)
Query: 50 AVRRAAPAVVNVYNRGLNTN-------------------------SHNQLEIRTLGSGVI 84
++ PA+VNV +G N + ++GSGVI
Sbjct: 24 VLKNIMPAIVNVAVQGYLPNDVTPPGSAGNDEENQPNNRPPQSRMPEKGRKFESIGSGVI 83
Query: 85 MD-QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPI 143
+D G IITN HVI +A I V LQDGR +A L+G DS TDLAVLKI+A L ++ I
Sbjct: 84 IDPNNGVIITNDHVIRNASLITVTLQDGRRLKARLIGGDSETDLAVLKIDAKN-LKSLVI 142
Query: 144 NARRVPHIGDVVLAIGNPYNL-----GQTITQGIISATGRIGLNPTGRQNFLQTDASINH 198
+GD V+AIGNP+ L Q+ T GI+SA R LN G +NF+QTDA+IN
Sbjct: 143 GDSDKLEVGDFVVAIGNPFGLNSFGNSQSATFGIVSALKRSDLNIEGVENFIQTDAAINP 202
Query: 199 GNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGY 258
GNSGGALVN+ GEL+GINT GIGFAIP + + ++I+ G + RG
Sbjct: 203 GNSGGALVNAKGELIGINTAILSPYGGN---VGIGFAIPINMVKDVAQQIIKFGSIHRGL 259
Query: 259 IGIGGREIAPLHAQGGGID-QLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALE 317
+GI + + P AQ G QG +V++V+P+ PA AG++ D+I +++ A +
Sbjct: 260 MGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQ 319
Query: 318 TMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYPA 353
++ +R GS + ++V RD+K LTL + + +
Sbjct: 320 VKTTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKS 355
Score = 42.0 bits (97), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 2/78 (2%)
Query: 261 IGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMD 320
+ G + + + G+ V S + AGI+ D+IIS + KP
Sbjct: 367 LYGLALRAFEQESPPHGNVIGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQT 426
Query: 321 QVAEIRPGSVIPVVVMRD 338
E + + V V+R
Sbjct: 427 IAQEKK--KELLVQVLRG 442
>3PV4-A nrPDB
Length = 354
Score = 310 bits (794), Expect = 6e-85, Method: Composition-based stats.
Identities = 120/288 (41%), Positives = 170/288 (59%), Gaps = 11/288 (3%)
Query: 70 SHNQLEIRTLGSGVIMD-QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLA 128
+ ++GSGVI+D G IITN HVI +A I V LQDGR +A L+G DS TDLA
Sbjct: 69 PEKGRKFESIGSGVIIDPNNGVIITNDHVIRNASLITVTLQDGRRLKARLIGGDSETDLA 128
Query: 129 VLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNL-----GQTITQGIISATGRIGLNP 183
VLKI+A L ++ I +GD V+AIGNP+ L Q+ T GI+SA R LN
Sbjct: 129 VLKIDAKN-LKSLVIGDSDKLEVGDFVVAIGNPFGLNSFGNSQSATFGIVSALKRSDLNI 187
Query: 184 TGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATK 243
G +NF+QTDA+IN GNSGGALVN+ GEL+GINT GIGFAIP +
Sbjct: 188 EGVENFIQTDAAINPGNSGGALVNAKGELIGINTAILSPYGGN---VGIGFAIPINMVKD 244
Query: 244 IMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGID-QLQGIVVNEVSPDGPAANAGIQVND 302
+ ++I+ G + RG +GI + + P AQ G QG +V++V+P+ PA AG++ D
Sbjct: 245 VAQQIIKFGSIHRGLMGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGD 304
Query: 303 LIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQE 350
+I +++ A + ++ +R GS + ++V RD+K LTL + +
Sbjct: 305 IITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTD 352
>4YO1-A nrPDB
Length = 351
Score = 309 bits (792), Expect = 9e-85, Method: Composition-based stats.
Identities = 127/329 (38%), Positives = 186/329 (56%), Gaps = 32/329 (9%)
Query: 50 AVRRAAPAVVNVYNRGLNTN---------------------SHNQLEIRTLGSGVIMD-Q 87
++ A PA+VNV +G N + ++GSGVI+D +
Sbjct: 25 VLKNAMPAIVNVAVQGYLPNNMASGNADDDDGENSKQPSRIPEKGRKFESIGSGVIIDPK 84
Query: 88 RGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARR 147
G IITN HVI +A+ I V LQDGR +A L+G DS TDLAVLKI+A L ++ I
Sbjct: 85 NGIIITNDHVIRNANLITVTLQDGRRLKARLIGGDSETDLAVLKIDAKN-LKSLVIGDSD 143
Query: 148 VPHIGDVVLAIGNPYNL-----GQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSG 202
+GD V+AIGNP+ L Q+ T GI+SA R LN G +NF+QTDA+IN GN+G
Sbjct: 144 KLEVGDYVVAIGNPFGLNSFGNSQSATFGIVSALKRSDLNIEGVENFIQTDAAINPGNAG 203
Query: 203 GALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIG 262
GALVN+ GEL+GINT GIGFAIP +A + ++I+ G + RG +GI
Sbjct: 204 GALVNAKGELIGINTAIISPYGGN---VGIGFAIPINMAKDVAQQIIKFGSIHRGLMGIF 260
Query: 263 GREIAPLHAQGGGI-DQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQ 321
+ + P AQ G + QG +V++V+ + PA AG++ D+I+ +++ A +
Sbjct: 261 VQHLTPELAQSMGYAEDFQGALVSQVNQNSPAQLAGLKSGDVIVQINDTKITQATQVKTT 320
Query: 322 VAEIRPGSVIPVVVMRDDKQLTLQVTIQE 350
++ +R GS + ++RD+K LTL V + +
Sbjct: 321 ISLLRAGSTAKIKILRDNKPLTLDVEVTD 349
>3QO6-A nrPDB
Length = 348
Score = 303 bits (776), Expect = 7e-83, Method: Composition-based stats.
Identities = 116/339 (34%), Positives = 179/339 (52%), Gaps = 28/339 (8%)
Query: 32 LSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSH--NQLEI-RTLGSGVIMDQR 88
+STP+ TDE A+ L + P+VV + N + ++ + LE+ + GSG + D++
Sbjct: 6 VSTPKKLQTDEL-ATVRL-FQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQ 63
Query: 89 GYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINAT-GGLPTIPINARR 147
G+I+TN HVI A + V L D F+A +VG D D+AVL+I+A L IP+
Sbjct: 64 GHIVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSA 123
Query: 148 VPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTG---RQNFLQTDASINHGNSGGA 204
+G V AIGNP+ L T+T G+IS R + Q+ +QTDA+IN GNSGG
Sbjct: 124 DLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGP 183
Query: 205 LVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGR 264
L++S G L+GINT + S G+GF+IP I+D+L+R G+V R +GI
Sbjct: 184 LLDSSGTLIGINTAIYSPSGA---SSGVGFSIPVDTVGGIVDQLVRFGKVTRPILGI--- 237
Query: 265 EIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQ-----------VNDLIISVDNKPAI 313
+ AP Q + G++V + P GPA AG+Q + D+I SV+
Sbjct: 238 KFAPD--QSVEQLGVSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVS 295
Query: 314 SALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYP 352
+ + + + + G + V V+R D + + VT++ P
Sbjct: 296 NGSDLYRILDQCKVGDEVTVEVLRGDHKEKISVTLEPKP 334
>3NUM-A nrPDB
Length = 332
Score = 299 bits (766), Expect = 1e-81, Method: Composition-based stats.
Identities = 104/322 (32%), Positives = 169/322 (52%), Gaps = 29/322 (9%)
Query: 46 SYNL---AVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD 102
YN V + APAVV++ S ++ + + GSG I+ + G I+TN HV+ +
Sbjct: 12 KYNFIADVVEKIAPAVVHIELFRKLPFSKREVPVAS-GSGFIVSEDGLIVTNAHVVTNKH 70
Query: 103 QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPY 162
++ V L++G +EA + D D+A++KI+ G LP + + G+ V+AIG+P+
Sbjct: 71 RVKVELKNGATYEAKIKDVDEKADIALIKIDHQGKLPVLLLGRSSELRPGEFVVAIGSPF 130
Query: 163 NLGQTITQGIISATGRIGLNPTGRQ---NFLQTDASINHGNSGGALVNSLGELMGINTLS 219
+L T+T GI+S T R G R +++QTDA IN+GN+GG LVN GE++GINTL
Sbjct: 131 SLQNTVTTGIVSTTQRGGKELGLRNSDMDYIQTDAIINYGNAGGPLVNLDGEVIGINTL- 189
Query: 220 FDKSNDGETPEGIGFAIPFQLATKIM----DKLIRDGRVI-RGYIGIGGREIAPLHAQGG 274
+ GI FAIP K + D+ + + + YIGI + A+
Sbjct: 190 -------KVTAGISFAIPSDKIKKFLTESHDRQAKGKAITKKKYIGIRMMSLTSSKAKEL 242
Query: 275 GI------DQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPG 328
D + G + EV PD PA G++ ND+IIS++ + +SA + D + +
Sbjct: 243 KDRHRDFPDVISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDVSDVI---KRE 299
Query: 329 SVIPVVVMRDDKQLTLQVTIQE 350
S + +VV R ++ + + V +E
Sbjct: 300 STLNMVVRRGNEDIMITVIPEE 321
>4RI0-A nrPDB
Length = 332
Score = 293 bits (750), Expect = 7e-80, Method: Composition-based stats.
Identities = 111/343 (32%), Positives = 173/343 (50%), Gaps = 44/343 (12%)
Query: 29 LNPLSTPQFDSTDETPASYNL---AVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIM 85
L+ LS+P++ +N V + APAVV++ + + + + GSG IM
Sbjct: 1 LHQLSSPRY--------KFNFIADVVEKIAPAVVHIELFLRHPLFGRNVPL-SSGSGFIM 51
Query: 86 DQRGYIITNKHVIN------DADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLP 139
+ G IITN HV++ Q+ V LQ+G +EA + D +D+A +KI+ LP
Sbjct: 52 SEAGLIITNAHVVSSNSAAPGRQQLKVQLQNGDSYEATIKDIDKKSDIATIKIHPKKKLP 111
Query: 140 TIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQ---NFLQTDASI 196
+ + G+ V+AIG+P+ L T+T GI+S R G R +++QTDA I
Sbjct: 112 VLLLGHSADLRPGEFVVAIGSPFALQNTVTTGIVSTAQREGRELGLRDSDMDYIQTDAII 171
Query: 197 NHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIM----DKLIRDG 252
N+GN+GG LVN GE++GINTL + GI FAIP T+ + DK I+D
Sbjct: 172 NYGNAGGPLVNLDGEVIGINTL--------KVTAGISFAIPSDRITRFLTEFQDKQIKDW 223
Query: 253 RVIRGYIGIGGREIAP-----LHAQGGGIDQL-QGIVVNEVSPDGPAANAGIQVNDLIIS 306
+ + +IGI R I P L A ++ GI V EV+P+ P+ GIQ D+I+
Sbjct: 224 K--KRFIGIRMRTITPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGGIQDGDIIVK 281
Query: 307 VDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQ 349
V+ +P + + E + V P + + V R + L + +
Sbjct: 282 VNGRPLVDSSELQEAVLTESP---LLLEVRRGNDDLLFSIAPE 321
>5T69-A nrPDB
Length = 367
Score = 291 bits (745), Expect = 3e-79, Method: Composition-based stats.
Identities = 118/357 (33%), Positives = 168/357 (47%), Gaps = 39/357 (10%)
Query: 31 PLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLN---------------------TN 69
P+ T Q + + AV R+ PAVV + +
Sbjct: 15 PVITAQASVPLTSESFVAAAVSRSGPAVVRIDTETVVTRRTDPILDDPFFQEFFGRSFPV 74
Query: 70 SHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAV 129
+ I GSG I+D G I+TN HV++ A +++V L+DGR F+ + G+D +TDLAV
Sbjct: 75 PPRERRIAGQGSGFIIDNSGIILTNAHVVDGASKVVVTLRDGRTFDGQVRGTDEVTDLAV 134
Query: 130 LKINATG-GLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLN---PTG 185
+KI G LP P+ +GD +A+GNP L T+T GIIS GR P
Sbjct: 135 VKIEPQGSALPVAPLGTSSNLQVGDWAIAVGNPVGLDNTVTLGIISTLGRSAAQAGIPDK 194
Query: 186 RQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIM 245
R F+QTDA+IN GN+GG L+N+ GE++GINT GIGFAIP A I
Sbjct: 195 RVEFIQTDAAINPGNAGGPLLNARGEVIGINTAI------RADATGIGFAIPIDQAKAIQ 248
Query: 246 DKLIRDGRVIRGYIGIGGREIAPLHAQGGG--------IDQLQGIVVNEVSPDGPAANAG 297
+ L G V YIG+ I AQ I ++ GI+V V P PA AG
Sbjct: 249 NTLAAGGTVPHPYIGVQMMNITVDQAQQNNRNPNSPFIIPEVDGILVMRVLPGTPAERAG 308
Query: 298 IQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYPAT 354
I+ D+I++VD P V + + + ++R D++L+L V +
Sbjct: 309 IRRGDVIVAVDGTPISDGARLQRIVEQAGLNKALKLDLLRGDRRLSLTVQTAQLRNP 365
>2R3U-A nrPDB
Length = 211
Score = 281 bits (720), Expect = 2e-76, Method: Composition-based stats.
Identities = 210/210 (100%), Positives = 210/210 (100%)
Query: 43 TPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD 102
TPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD
Sbjct: 2 TPASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD 61
Query: 103 QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPY 162
QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPY
Sbjct: 62 QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPY 121
Query: 163 NLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDK 222
NLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDK
Sbjct: 122 NLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDK 181
Query: 223 SNDGETPEGIGFAIPFQLATKIMDKLIRDG 252
SNDGETPEGIGFAIPFQLATKIMDKLIRDG
Sbjct: 182 SNDGETPEGIGFAIPFQLATKIMDKLIRDG 211
>5M3O-A nrPDB
Length = 334
Score = 273 bits (698), Expect = 8e-74, Method: Composition-based stats.
Identities = 97/323 (30%), Positives = 163/323 (50%), Gaps = 30/323 (9%)
Query: 45 ASYNL---AVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDA 101
+ YN V + APAVV + + ++ I + GSG ++ G I+TN HV+ D
Sbjct: 13 SQYNFIADVVEKTAPAVVYIEILDRHPFLGREVPI-SNGSGFVVAADGLIVTNAHVVADR 71
Query: 102 DQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNP 161
++ V L G +EA++ D + D+A L+I LPT+P+ G+ V+A+G+P
Sbjct: 72 RRVRVRLLSGDTYEAVVTAVDPVADIATLRIQTKEPLPTLPLGRSADVRQGEFVVAMGSP 131
Query: 162 YNLGQTITQGIISATGRIGLN---PTGRQNFLQTDASINHGNSGGALVNSLGELMGINTL 218
+ L TIT GI+S+ R + P ++QTDA+I+ GNSGG LVN GE++G+NT+
Sbjct: 132 FALQNTITSGIVSSAQRPARDLGLPQTNVEYIQTDAAIDFGNSGGPLVNLDGEVIGVNTM 191
Query: 219 SFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVI------RGYIGIGGREIAP---- 268
+ GI FAIP + + + + R YIG+ ++P
Sbjct: 192 --------KVTAGISFAIPSDRLREFLHRGEKKNSSSGISGSQRRYIGVMMLTLSPSILA 243
Query: 269 -LHAQGGGIDQLQ-GIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIR 326
L + +Q G+++++V PA AG++ D+I+++ + +A + + V R
Sbjct: 244 ELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAV---R 300
Query: 327 PGSVIPVVVMRDDKQLTLQVTIQ 349
S + V + R + LTL VT +
Sbjct: 301 TQSQLAVQIRRGRETLTLYVTPE 323
>4FLN-A nrPDB
Length = 539
Score = 270 bits (690), Expect = 7e-73, Method: Composition-based stats.
Identities = 74/349 (21%), Positives = 143/349 (40%), Gaps = 31/349 (8%)
Query: 24 PSLRSLNPLSTPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTN----SHNQLEIRTL 79
P LS D + PA + A AVV VY + Q + +
Sbjct: 19 PKKEKKESLSDFSRDQQTD-PAKIHDA--SFLNAVVKVYCTHTAPDYSLPWQKQRQFTST 75
Query: 80 GSGVIMDQRGYIITNKHVINDADQIIVALQ-DGRVFEALLVGSDSLTDLAVLKINATGGL 138
GS ++ G ++TN H + Q+ V + D R + A ++ D+A+L + +
Sbjct: 76 GSAFMIG-DGKLLTNAHCVEHDTQVKVKRRGDDRKYVAKVLVRGVDCDIALLSVESEDFW 134
Query: 139 P-TIPINARRVPHIGDVVLAIGNPYNLGQ-TITQGIISATGRIGLNPTGRQNF--LQTDA 194
P+ +P + D V +G P ++T+G++S + G + +Q DA
Sbjct: 135 KGAEPLRLGHLPRLQDSVTVVGYPLGGDTISVTKGVVSRIE-VTSYAHGSSDLLGIQIDA 193
Query: 195 SINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRV 254
+IN GNSGG N GE +G+ + E E IG+ IP + + + R+G+
Sbjct: 194 AINPGNSGGPAFNDQGECIGVAFQVYRS----EETENIGYVIPTTVVSHFLTDYERNGKY 249
Query: 255 I-RGYIGIGGREI-APLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPA 312
+G+ +++ P + + +G++V V P A+ ++ D+I+S D+
Sbjct: 250 TGYPCLGVLLQKLENPALRECLKVPTNEGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHV 308
Query: 313 ----------ISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEY 351
+ +++ G + + ++R + +QV ++
Sbjct: 309 GCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVVLRPR 357
>5ILB-A nrPDB
Length = 474
Score = 269 bits (688), Expect = 1e-72, Method: Composition-based stats.
Identities = 69/315 (21%), Positives = 129/315 (40%), Gaps = 29/315 (9%)
Query: 57 AVVNVYNRGLNTN----SHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQ-DG 111
AVV VY + Q + + GS ++ G ++TN H + Q+ V + D
Sbjct: 9 AVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIG-DGKLLTNAHCVEHDTQVKVKRRGDD 67
Query: 112 RVFEALLVGSDSLTDLAVLKINATGGLP-TIPINARRVPHIGDVVLAIGNPYNLGQ-TIT 169
R + A ++ D+A+L + + P+ +P + D V +G P ++T
Sbjct: 68 RKYVAKVLVRGVDCDIALLSVESEDFWKGAEPLRLGHLPRLQDSVTVVGYPLGGDTISVT 127
Query: 170 QGIISATGRIGLNPTGRQNF--LQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGE 227
+G++S + G + +Q DA+IN GNSGG N GE +G+ + E
Sbjct: 128 KGVVSRIE-VTSYAHGSSDLLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVYRS----E 182
Query: 228 TPEGIGFAIPFQLATKIMDKLIRDGRVIR-GYIGIGGR--EIAPLHAQGGGIDQLQGIVV 284
E IG+ IP + + + R+G+ +GI + E L G +G+ +
Sbjct: 183 ETENIGYVIPTTVVSHFLTDYERNGKYTGFPVLGIEWQKMENPDLRKSMGMESHQKGVRI 242
Query: 285 NEVSPDGPAANAGIQVNDLIISVDNKPAISALET----------MDQVAEIRPGSVIPVV 334
+ P P + ++ +D+I+S D + +++ G V
Sbjct: 243 RRIEPTAPESQV-LKPSDIILSFDGVNIANDGTVPFRHGERIGFSYLISQKYTGDSALVK 301
Query: 335 VMRDDKQLTLQVTIQ 349
V+R+ + L + +
Sbjct: 302 VLRNKEILEFNIKLA 316
>4IC6-A nrPDB
Length = 368
Score = 268 bits (684), Expect = 3e-72, Method: Composition-based stats.
Identities = 109/358 (30%), Positives = 175/358 (48%), Gaps = 31/358 (8%)
Query: 24 PSLRSLNPLSTPQFDSTDETPASYNLA--VRRAAPAVVNVYNRGLNTNSHNQLEIR---T 78
PS+ ++ +S F + P + + +VVN+++ L +
Sbjct: 6 PSVATVEDVSPTVFPAGPLFPTEGRIVQLFEKNTYSVVNIFDVTLRPQLKMTGVVEIPEG 65
Query: 79 LGSGVIMDQRGYIITNKHVINDA-----------DQIIVALQDG--RVFEALLVGSDSLT 125
GSGV+ D +GYI+TN HVI +A ++ + DG + FE LVG+D
Sbjct: 66 NGSGVVWDGQGYIVTNYHVIGNALSRNPSPGDVVGRVNILASDGVQKNFEGKLVGADRAK 125
Query: 126 DLAVLKINATGGL-PTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPT 184
DLAVLK++A L I + +G LAIGNP+ T+T G+IS R + T
Sbjct: 126 DLAVLKVDAPETLLKPIKVGQSNSLKVGQQCLAIGNPFGFDHTLTVGVISGLNRDIFSQT 185
Query: 185 GRQ--NFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLAT 242
G +QTDA+IN GN+GG L++S G L+GINT F ++ T G+GFAIP
Sbjct: 186 GVTIGGGIQTDAAINPGNAGGPLLDSKGNLIGINTAIFTQTG---TSAGVGFAIPSSTVL 242
Query: 243 KIMDKLIRDGRVIRGYIGIGGREIAPLH----AQGGGIDQLQGIVVNE---VSPDGPAAN 295
KI+ +LI+ +V+R I I + G + Q+ G + E + P
Sbjct: 243 KIVPQLIQFSKVLRAGINIELAPDPVANQLNVRNGALVLQVPGKSLAEKAGLHPTSRGFA 302
Query: 296 AGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYPA 353
I + D+I++VD+KP + E M + E G + + + R ++ L L+++++E +
Sbjct: 303 GNIVLGDIIVAVDDKPVKNKAELMKILDEYSVGDKVTLKIKRGNEDLELKISLEEKSS 360
>6IEO-A nrPDB
Length = 314
Score = 257 bits (656), Expect = 6e-69, Method: Composition-based stats.
Identities = 103/283 (36%), Positives = 147/283 (51%), Gaps = 23/283 (8%)
Query: 80 GSGVIMDQRGYIITNKHVINDAD------QIIVALQDGRVFEALLVGSDSLTDLAVLKIN 133
GSGVI+D RGYI+TN HVI++A + V DG+ A LVG D TDLAVLK++
Sbjct: 32 GSGVIVDGRGYIVTNNHVISEAANNPSQFKTTVVFNDGKEVPANLVGRDPKTDLAVLKVD 91
Query: 134 ATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGR------IGLNPTGRQ 187
L + +GD VLA+G P L T+TQGI+SA R G +
Sbjct: 92 NVDNLTVARLGDSSKVRVGDEVLAVGAPLGLRSTVTQGIVSALHRPVPLSGEGSDTDTVI 151
Query: 188 NFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDK 247
+ +QTDASINHGNSGG L++ +++GINT S+ G+GFAIP + +
Sbjct: 152 DAIQTDASINHGNSGGPLIDMDAQVIGINTAGKSLSDS---ASGLGFAIPVNEMKLVANS 208
Query: 248 LIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISV 307
LI+DG+++ +GI R ++ A G V V PA GI ND+I+ V
Sbjct: 209 LIKDGKIVHPTLGISTRSVSNAIAS--------GAQVANVKAGSPAQKGGILENDVIVKV 260
Query: 308 DNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQE 350
N+ + E + V ++ G P+ V+R+ + +TL V
Sbjct: 261 GNRAVADSDEFVVAVRQLAIGQDAPIEVVREGRHVTLTVKPDP 303
>5JYK-A nrPDB
Length = 566
Score = 243 bits (621), Expect = 7e-65, Method: Composition-based stats.
Identities = 67/324 (20%), Positives = 126/324 (38%), Gaps = 30/324 (9%)
Query: 50 AVRRAAP---AVVNVYNRGLNTN----SHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD 102
V + P AVV V+ N + + + SG I+ R ++TN H +
Sbjct: 91 TVVKVVPSMDAVVKVFCVHTEPNFSLPWQRKRQYSSGSSGFIIGGR-RVLTNAHSVEHHT 149
Query: 103 QIIVALQ-DGRVFEALLVGSDSLTDLAVLKINATGGLPTI-PINARRVPHIGDVVLAIGN 160
Q+ + + + A ++ + D+A+L + + P+ +P + D V +G
Sbjct: 150 QVKLKKRGSDTKYLATVLAIGTECDIALLTVTDDEFWEGVSPVEFGDLPALQDAVTVVGY 209
Query: 161 PYNLGQ-TITQGIISATGRIGLNPTGRQNF-LQTDASINHGNSGGALVNSLGELMGINTL 218
P ++T G++S + + LQ DA+IN GNSGG N G+ +GI
Sbjct: 210 PIGGDTISVTSGVVSRMEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQ 269
Query: 219 SFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIR-GYIGIGGR--EIAPLHAQGGG 275
S E E IG+ IP + + + + +GI + E L G
Sbjct: 270 SLKH----EDAENIGYVIPTPVIVHFIQDYEKHDKYTGFPVLGIEWQKMENPDLRKSMGM 325
Query: 276 IDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALET----------MDQVAEI 325
+G+ + + P P + ++ +D+I+S D + +++
Sbjct: 326 ESHQKGVRIRRIEPTAPESQV-LKPSDIILSFDGVNIANDGTVPFRHGERIGFSYLISQK 384
Query: 326 RPGSVIPVVVMRDDKQLTLQVTIQ 349
G V V+R+ + L + +
Sbjct: 385 YTGDSALVKVLRNKEILEFNIKLA 408
>1L1J-A nrPDB
Length = 239
Score = 235 bits (600), Expect = 2e-62, Method: Composition-based stats.
Identities = 81/235 (34%), Positives = 116/235 (49%), Gaps = 27/235 (11%)
Query: 50 AVRRAAPAVVNVYNRGLNTNSHN-------------------QLEIRTLGSGVIMDQRGY 90
V APAVV + S + ++ +LGSG I D GY
Sbjct: 9 VVEACAPAVVKIDVVKTVKTSFFDPYFEQFFKKWFGELPPGFERQVASLGSGFIFDPEGY 68
Query: 91 IITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINA-TGGLPTIPINARRVP 149
I+TN HV+ AD I V + DG ++A +G D D+AV+KI A P +
Sbjct: 69 ILTNYHVVGGADNITVTMLDGSKYDAEYIGGDEELDIAVIKIKASDKKFPYLEFGDSDKV 128
Query: 150 HIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNF---LQTDASINHGNSGGALV 206
IG+ +AIGNP T+T G++SAT R P G + +QTDA+IN GNSGG L+
Sbjct: 129 KIGEWAIAIGNPLGFQHTVTVGVVSATNRRIPKPDGSGYYVGLIQTDAAINPGNSGGPLL 188
Query: 207 NSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGI 261
N GE++GINT + + +GFAIP K +D ++ +V + Y+G+
Sbjct: 189 NIHGEVIGINTAIVNP----QEAVNLGFAIPINTVKKFLDTILTQKKVEKAYLGV 239
>3STI-A nrPDB
Length = 245
Score = 234 bits (598), Expect = 4e-62, Method: Composition-based stats.
Identities = 99/242 (40%), Positives = 131/242 (54%), Gaps = 21/242 (8%)
Query: 33 STPQFDSTDETPASYNLAVRRAAPAVVNVYNRGLNTNSHN-----------------QLE 75
S P + S + + PAVV+V G +
Sbjct: 1 SIPGQVADQAPLPSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQP 60
Query: 76 IRTLGSGVIMD-QRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINA 134
LGSGVI++ +GY++TN HVIN A +I + L DGR F+A L+GSD +D+A+L+I
Sbjct: 61 FEGLGSGVIINASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQN 120
Query: 135 TGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDA 194
L I I +GD +A+GNP+ LGQT T GI+SA GR GLN G +NF+QTDA
Sbjct: 121 PSKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDA 180
Query: 195 SINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRV 254
SIN GNSGGAL+N GEL+GINT G GIGFAIP +A + +LI G +
Sbjct: 181 SINRGNSGGALLNLNGELIGINTAILAP---GGGSVGIGFAIPSNMARTLAQQLIDFGEI 237
Query: 255 IR 256
+
Sbjct: 238 LE 239
>3TJO-A nrPDB
Length = 231
Score = 232 bits (592), Expect = 1e-61, Method: Composition-based stats.
Identities = 75/208 (36%), Positives = 116/208 (55%), Gaps = 15/208 (7%)
Query: 46 SYNL---AVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD 102
YN V + APAVV++ S ++ + + GSG I+ + G I+TN HV+ +
Sbjct: 29 KYNFIADVVEKIAPAVVHIELFRKLPFSKREVPVAS-GSGFIVSEDGLIVTNAHVVTNKH 87
Query: 103 QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPY 162
++ V L++G +EA + D D+A++KI+ G LP + + G+ V+AIG+P+
Sbjct: 88 RVKVELKNGATYEAKIKDVDEKADIALIKIDHQGKLPVLLLGRSSELRPGEFVVAIGSPF 147
Query: 163 NLGQTITQGIISATGRIGLNPTGRQ---NFLQTDASINHGNSGGALVNSLGELMGINTLS 219
+L T+T GI+S T R G R +++QTDA IN+GN+GG LVN GE++GINTL
Sbjct: 148 SLQNTVTTGIVSTTQRGGKELGLRNSDMDYIQTDAIINYGNAGGPLVNLDGEVIGINTL- 206
Query: 220 FDKSNDGETPEGIGFAIPFQLATKIMDK 247
+ GI FAIP K + +
Sbjct: 207 -------KVTAGISFAIPSDKIKKFLTE 227
>2Z9I-A nrPDB
Length = 324
Score = 216 bits (549), Expect = 2e-56, Method: Composition-based stats.
Identities = 107/325 (32%), Positives = 152/325 (46%), Gaps = 38/325 (11%)
Query: 44 PASYNLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDA-- 101
P S + P+VV L T+ Q E GSG+I+ G I+TN HVI A
Sbjct: 5 PGSVEQVAAKVVPSVVM-----LETDLGRQSE---EGSGIILSAEGLILTNNHVIAAAAK 56
Query: 102 -------DQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDV 154
+ V DGR +VG+D +D+AV+++ GL I + + +G
Sbjct: 57 PPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQP 116
Query: 155 VLAIGNPYNLGQTITQGIISATGR--IGLNPTGRQN----FLQTDASINHGNSGGALVNS 208
VLAIG+P L T+T GI+SA R G QN +QTDA+IN GNSGGALVN
Sbjct: 117 VLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNM 176
Query: 209 LGELMGIN----TLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGR 264
+L+G+N TL D ++ G+GFAIP A +I D+LI G+ +G+
Sbjct: 177 NAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVT 236
Query: 265 EIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAE 324
G + EV G AANAG+ ++ VD++P SA + V
Sbjct: 237 NDKDTL----------GAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRS 286
Query: 325 IRPGSVIPVVVMR-DDKQLTLQVTI 348
PG+ + + T+QVT+
Sbjct: 287 KAPGATVALTFQDPSGGSRTVQVTL 311
>4IC5-A nrPDB
Length = 291
Score = 206 bits (525), Expect = 9e-54, Method: Composition-based stats.
Identities = 75/227 (33%), Positives = 107/227 (47%), Gaps = 22/227 (9%)
Query: 51 VRRAAPAVVNVYNRGLNTNS-------HNQLEIRTLGSGVIMDQRGYIITNKHVINDADQ 103
++ +P+VV + L S +I GSG + D+ G+I+TN HVI
Sbjct: 46 FQKTSPSVVYIEAIELPKTSSGDILTDEENGKIEGTGSGFVWDKLGHIVTNYHVIAKLAT 105
Query: 104 IIVALQDGRVF-----------EALLVGSDSLTDLAVLKINATG-GLPTIPINARRVPHI 151
LQ +V E +VG D DLAVLKI G L + + +
Sbjct: 106 DQFGLQRCKVSLVDAKGTRFSKEGKIVGLDPDNDLAVLKIETEGRELNPVVLGTSNDLRV 165
Query: 152 GDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGR--QNFLQTDASINHGNSGGALVNSL 209
G AIGNPY T+T G++S GR +P G+ +QTDA IN GN+GG L++S
Sbjct: 166 GQSCFAIGNPYGYENTLTIGVVSGLGREIPSPNGKSISEAIQTDADINSGNAGGPLLDSY 225
Query: 210 GELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIR 256
G +G+NT +F + G + G+ FAIP + + LI G R
Sbjct: 226 GHTIGVNTATFTRKGSGMSS-GVNFAIPIDTVVRTVPYLIVYGTAYR 271
>5ILA-A nrPDB
Length = 301
Score = 186 bits (471), Expect = 2e-47, Method: Composition-based stats.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 20/220 (9%)
Query: 50 AVRRAAP---AVVNVYNRGLNTN----SHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD 102
V + P AVV V+ N + + + SG I+ R ++TN H +
Sbjct: 91 TVVKVVPSMDAVVKVFCVHTEPNFSLPWQRKRQYSSGSSGFIIGGR-RVLTNAHSVEHHT 149
Query: 103 QIIVALQ-DGRVFEALLVGSDSLTDLAVLKINATGGLPTI-PINARRVPHIGDVVLAIGN 160
Q+ + + + A ++ + D+A+L + + P+ +P + D V +G
Sbjct: 150 QVKLKKRGSDTKYLATVLAIGTECDIALLTVTDDEFWEGVSPVEFGDLPALQDAVTVVGY 209
Query: 161 PYNLGQ-TITQGIISATGRIGLNPTGRQNF-LQTDASINHGNSGGALVNSLGELMGINTL 218
P ++T G++S + + LQ DA+IN GNSGG N G+ +GI
Sbjct: 210 PIGGDTISVTSGVVSRMEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQ 269
Query: 219 SFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGY 258
S E E IG+ IP T ++ I+D Y
Sbjct: 270 SLKH----EDAENIGYVIP----TPVIVHFIQDYEKHDKY 301
>5HM9-A nrPDB
Length = 189
Score = 158 bits (399), Expect = 4e-39, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 9/171 (5%)
Query: 81 SGVIMDQRGYIITNKHVINDADQIIVALQDG---RVFEALLVGSDSLTDLAVLKINATGG 137
SG I+ GY+IT H ++ +I V + R F A +V + DLA+LK+ T
Sbjct: 24 SGAIVGTNGYVITTLHSVSKLPEISVQVATTGGIRRFPAQVVKTIPGHDLALLKMQTTEK 83
Query: 138 LPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGII-SATGRIGLNPTGRQNFLQTDASI 196
+ + G V A G + QG++ SA + + T + L++DA
Sbjct: 84 FLHFRMADVQTVVPGQQVFAFGRNMAGAPLVRQGLVQSADAPLAVGATQITHLLRSDAVY 143
Query: 197 NHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDK 247
+ +GG LVN+ G+L+GIN + G T + GF +P Q+ +
Sbjct: 144 SWEQTGGPLVNAQGDLVGINIAA-----TGPTGKVEGFTVPAQVIVSHLQD 189
>3LT3-A nrPDB
Length = 217
Score = 73.2 bits (178), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 27/212 (12%)
Query: 48 NLAVRRAAPAVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVA 107
N V P+VV + R L LE G+G ++ ++TN HV+ ++ + V
Sbjct: 14 NPVVAATEPSVVKI--RSLAPRCQKVLE----GTGFVISPD-RVMTNAHVVAGSNNVTVY 66
Query: 108 LQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVP-HIGDVVLAIGNPYNLGQ 166
D + FEA +V D D+A+L A LP P+ P G V+ +G P
Sbjct: 67 AGD-KPFEATVVSYDPSVDVAIL---AVPHLPPPPLVFAAEPAKTGADVVVLGYPGGGNF 122
Query: 167 TITQG-IISATGRIGLNPTGRQNFLQTD-----ASINHGNSGGALVNSLGELMGINTLSF 220
T T I A G + G + D A + G++GG L++ G+++G+
Sbjct: 123 TATPARIREAIRLSGPDIYGDPEPVTRDVYTIRADVEQGDAGGPLIDLNGQVLGV----- 177
Query: 221 DKSNDGETPEGIGFAIPFQLATKIMDKLIRDG 252
GF + A ++ +L + G
Sbjct: 178 -VFGAAIDDAETGFVL---TAGEVAGQLAKIG 205
>1DUE-A nrPDB
Length = 242
Score = 59.7 bits (143), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 76/202 (37%), Gaps = 41/202 (20%)
Query: 74 LEIRTLGSGVIMDQRGYIITNKHV--INDADQIIVALQ-------DGRV------FEALL 118
++ +T +GV++ + ++TN+H+ + D V+ + +G +E
Sbjct: 51 VKGQTSATGVLIGKN-TVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTETPYGEYEVKE 109
Query: 119 VGSDS---LTDLAVLKINAT-------GGLPTIPINARRVPHIGDVVLAIGNPYNLGQTI 168
+ + DLA++++ + I GD + IG P++
Sbjct: 110 ILQEPFGAGVDLALIRLKPDQNGVSLGDKISPAKIGTSNDLKDGDKLELIGYPFDHK--- 166
Query: 169 TQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGET 228
++ R + T L+ GN+G + NS GEL+GI++ +
Sbjct: 167 ----VNQMHRSEIELTTLSRGLRYYGFTVPGNAGSGIFNSNGELVGIHSSKVSHLDREHQ 222
Query: 229 ---PEGIGFAIPFQLATKIMDK 247
GIG +I+++
Sbjct: 223 INYGVGIG-----NYVKRIINE 239
>4INK-A nrPDB
Length = 205
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 66/196 (33%), Gaps = 25/196 (12%)
Query: 57 AVVNVYNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHV---------INDADQIIVA 107
+V + N + S + G+G ++ IITNKHV I
Sbjct: 5 SVKLITNTNVAPYS--GVTWMGAGTGFVVGNH-TIITNKHVTYHMKVGDEIKAHPNGFYN 61
Query: 108 LQDGRVFEALLVGSDSLTDLAVLKINATGGLP--------TIPINARRVPHIGDVVLAIG 159
G +V D+AV+++ P T N + + IG
Sbjct: 62 NGGGLYKVTKIVDYPGKEDIAVVQVEEKSTQPKGRKFKDFTSKFNIASEAKENEPISVIG 121
Query: 160 NPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLS 219
P G + G + N + +DA + G+SG ++NS E +G+ S
Sbjct: 122 YPNPNGNKLQM-----YESTGKVLSVNGNIVTSDAVVQPGSSGSPILNSKREAIGVMYAS 176
Query: 220 FDKSNDGETPEGIGFA 235
+ + + F+
Sbjct: 177 DKPTGESTRSFAVYFS 192
>2KL1-A nrPDB
Length = 94
Score = 57.4 bits (137), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 278 QLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMR 337
+ +G+ V V P+ PAA ++ D I ++D +P ++ + + V E + G + V +R
Sbjct: 3 EAKGVYVMSVLPNMPAA-GRLEAGDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVTFIR 61
Query: 338 DDKQLTLQVTIQEYP 352
D KQ ++ ++ +P
Sbjct: 62 DRKQHEAELVLKPFP 76
>5MM8-A nrPDB
Length = 204
Score = 55.9 bits (133), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 68/189 (35%), Gaps = 22/189 (11%)
Query: 63 NRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD--QIIVALQDGRVFEA---- 116
+ N +N + G+G I+ + I+TNKHV+ + I+A +G
Sbjct: 9 IKNTNVAPYNGVVSIGSGTGFIVGKN-TIVTNKHVVAGMEIGAHIIAHPNGEYNNGGFYK 67
Query: 117 --LLVGSDSLTDLAVLKINATGGLPTIP--------INARRVPHIGDVVLAIGNPYNLGQ 166
+V D+A+L + P + + + +G P
Sbjct: 68 VKKIVRYSGQEDIAILHVEDKAVHPKNRNFKDYTGILKIASEAKENERISIVGYPEPYIN 127
Query: 167 TITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDG 226
G + + N + TDA + GNSG A+ NS E++G++ N
Sbjct: 128 KFQM-----YESTGKVLSVKGNMIITDAFVEPGNSGSAVFNSKYEVVGVHFGGNGPGNKS 182
Query: 227 ETPEGIGFA 235
G+ F+
Sbjct: 183 TKGYGVYFS 191
>2AS9-A nrPDB
Length = 210
Score = 53.5 bits (127), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 64/189 (33%), Gaps = 28/189 (14%)
Query: 81 SGVIMDQRGYIITNKHVIND---ADQIIV----ALQDGRVFEALLVGSDS-LTDLAVLKI 132
+G ++ + IITNKHV D D+I +G +++ + D++V+ I
Sbjct: 26 TGFVIGKN-TIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISDYPGDEDISVMNI 84
Query: 133 NATG----------GLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLN 182
N + + D + IG P + Q G
Sbjct: 85 EEQAVERGPKGFNFNENVQAFNFAKDAKVDDKIKVIGYPLPAQNSFKQ-----FESTGTI 139
Query: 183 PTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLAT 242
+ N L DA I GNSG ++NS E++G+ K + P
Sbjct: 140 KRIKDNILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAV--YFTP--QIK 195
Query: 243 KIMDKLIRD 251
+ K I
Sbjct: 196 DFIQKHIEQ 204
>4JCN-A nrPDB
Length = 216
Score = 52.4 bits (124), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 63/172 (36%), Gaps = 26/172 (15%)
Query: 79 LGSGVIMDQRGYIITNKHVINDA----DQIIV---ALQDGRVFEALLVGSDS-----LTD 126
GSGV++ + I+TNKHV+N A I V A + VG + +D
Sbjct: 35 SGSGVVVGEN-EILTNKHVVNGAKGNPRNISVHPSAKNENDYPNGKFVGQEIIPYPGNSD 93
Query: 127 LAVLKINATGG-------LPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRI 179
LA+L+++ + I++ I + + G P T +
Sbjct: 94 LAILRVSPNEHNQHIGQVVKPATISSNTDTRINENITVTGYP-GDKPLATM-----WESV 147
Query: 180 GLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEG 231
G L+ D S GNSG + N +++GI+ D +
Sbjct: 148 GKVVYIGGEELRYDLSTVGGNSGSPVFNGKNQVIGIHYGGVDNKYNSSVYIN 199
>2KJP-A nrPDB
Length = 91
Score = 51.2 bits (121), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 281 GIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDK 340
GI + V + PA I+V D IIS D K SA + +D ++ + G + + + R++K
Sbjct: 2 GIYASSVVENMPA-KGKIEVGDKIISADGKNYQSAEKLIDYISSKKAGDKVTLKIEREEK 60
Query: 341 QLTLQVTIQEYP 352
+ + +T++++P
Sbjct: 61 EKRVTLTLKQFP 72
>4JJ3-A nrPDB
Length = 243
Score = 50.1 bits (118), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/156 (14%), Positives = 62/156 (39%), Gaps = 21/156 (13%)
Query: 202 GGALVNSLGELMGINTLSFDKSNDGETP------EGIGFAIPFQLATKIMDKLIRDGRVI 255
G +V G+ MG+ + + P GF P ++
Sbjct: 19 GAPIVGGQGQAMGLPVAMQRRRGEQRAPVPALSDANGGFVAPN----------VQFSEAH 68
Query: 256 RGYIGIGGREIAPLHAQGGGID-QLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAIS 314
+ G+ ++ + + L+G++++E S + AA +G+ D++++++ + +
Sbjct: 69 --WQGMEALPLSIELKRKLKLPLDLEGLLIDETSLN--AAVSGLLAGDVLVAINGRKVKT 124
Query: 315 ALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQE 350
+ + ++ + V R + LTL ++ ++
Sbjct: 125 LKKMQKETRRVQMDRRASLTVYRKGRLLTLTLSEEK 160
>1DT2-A nrPDB
Length = 245
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 59/168 (35%), Gaps = 37/168 (22%)
Query: 74 LEIRTLGSGVIMDQRGYIITNKHVINDADQ----IIVALQDGR------------VFEAL 117
++ TL +GV++ + I+TN HV +A + II R FEA
Sbjct: 43 VKGSTLATGVLIGKN-TIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAE 101
Query: 118 LVGSDS---LTDLAVLKINATGG-------LPTIPINARRVPHIGDVVLAIGNPYNLGQT 167
+ DLA++K+ + I GD +G PYN
Sbjct: 102 EIKESPYGQGLDLAIIKLKPNEKGESAGDLIQPANIPDHIDIQKGDKYSLLGYPYNYS-- 159
Query: 168 ITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGI 215
S Q F T+ GNSG + N GEL+GI
Sbjct: 160 ----AYSLYQSQIEMFNDSQYFGYTEV----GNSGSGIFNLKGELIGI 199
>4QL6-A nrPDB
Length = 634
Score = 49.3 bits (116), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 277 DQLQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAISALETMDQVAEIR--PGSVIPV 333
+ + G+VV EV GPA G ++V D+I V+ K + + +R PGS + +
Sbjct: 245 EDIDGVVVKEVLAGGPADKTGSLRVGDIIYRVNGKNIEN-TPFPGVLDSLRGSPGSSVTL 303
Query: 334 VVMRDDKQLTLQV 346
+ R + +Q+
Sbjct: 304 DIHRQNNDHVIQL 316
>2W7U-A nrPDB
Length = 200
Score = 48.5 bits (114), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 57/167 (34%), Gaps = 41/167 (24%)
Query: 91 IITNKHVINDADQIIVAL--------QDGRVFEALLVGSDSLT-DLAVLKINAT------ 135
I+TNKH+ D + + G ++ + DLA++ ++ T
Sbjct: 34 IVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIVHVHETSTEGLN 93
Query: 136 --GGLPTIPINARRVPHIGDVVLAIGNPYN-------LGQTITQGIISATGRIGLNPTGR 186
+ D + IG P T T IS T
Sbjct: 94 FNKNVSYTKFADGAKVK--DRISVIGYPKGAQTKYKMFESTGTINHISGT---------- 141
Query: 187 QNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIG 233
F++ DA GNSG ++NS EL+GI + S E+ + G
Sbjct: 142 --FMEFDAYAQPGNSGSPVLNSKHELIGI---LYAGSGKDESEKNFG 183
>1WCZ-A nrPDB
Length = 268
Score = 48.2 bits (113), Expect = 6e-06, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 70/216 (32%), Gaps = 36/216 (16%)
Query: 58 VVNVYNRGLNTNSHNQLEIRT---LGSGVIMDQRGYIITNKHVINDADQIIVALQ----- 109
+ + N ++ Q+E T + SGV++ + ++TNKHV++ AL+
Sbjct: 11 ITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKD-TLLTNKHVVDATHGDPHALKAFPSA 69
Query: 110 -------DGRVFEALLVGSDSLTDLAVLKINATGG-------LPTIPINARRVPHIGDVV 155
+G + DLA++K + + ++ + +
Sbjct: 70 INQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQVNQNI 129
Query: 156 LAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGI 215
G P T G + +Q D S GNSG + N E++GI
Sbjct: 130 TVTGYP-GDKPVATM-----WESKGKITYLKGEAMQYDLSTTGGNSGSPVFNEKNEVIGI 183
Query: 216 NTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRD 251
+ +G + + I D
Sbjct: 184 HWGGVPNEFNGAVFINEN-------VRNFLKQNIED 212
>3I1E-A nrPDB
Length = 90
Score = 47.8 bits (112), Expect = 6e-06, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Query: 279 LQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRD 338
+ G+ V V D PAA + DLI +D + S+ E +D + + G + +
Sbjct: 1 MDGVYVLSVKEDVPAA-GILHAGDLITEIDGQSFKSSQEFIDYIHSKKVGDTVKIKYKHG 59
Query: 339 DKQLTLQVTIQ 349
+K + +
Sbjct: 60 NKNEEASIKLT 70
>2KJK-A nrPDB
Length = 100
Score = 47.8 bits (112), Expect = 7e-06, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 280 QGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDD 339
G+ V V D PAA + DLI +D + S+ E +D + + G + + +
Sbjct: 7 DGVYVLSVKEDVPAA-GILHAGDLITEIDGQSFKSSQEFIDYIHSKKVGDTVKIKYKHGN 65
Query: 340 KQLTLQVTIQ 349
K + +
Sbjct: 66 KNEEASIKLT 75
>4K1S-A nrPDB
Length = 206
Score = 47.4 bits (111), Expect = 9e-06, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 64/173 (36%), Gaps = 24/173 (13%)
Query: 81 SGVIMDQRGYIITNKHVIND---ADQIIVALQDGR-----VFEALLVGSDSLTDLAVLKI 132
+G ++ + I+TNKHV + D+I + ++ D++V+++
Sbjct: 27 TGFVVGKN-TILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQV 85
Query: 133 N------ATGGLP----TIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLN 182
G P G+ + IG P+ + +TG +
Sbjct: 86 EERAIERGPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYV--LYESTGPVMSV 143
Query: 183 PTGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFA 235
+ A GNSG ++NS EL+GI+ S K++D G+ F
Sbjct: 144 EGSSIVY---SAHTESGNSGSPVLNSNNELVGIHFASDVKNDDNRNAYGVYFT 193
>5C2Z-A nrPDB
Length = 255
Score = 45.8 bits (107), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 35/168 (20%)
Query: 74 LEIRTLGSGVIMDQRGYIITNKHVI----NDADQIIVALQDGRVFEALLVGS-------- 121
++ +T+ +G+++ + +ITNKH+ ND +++I R +L+V
Sbjct: 51 VKGKTIATGILIGKN-TVITNKHIARLAENDPNKVIFTPGSTRDEGSLVVKKPFGEFIAE 109
Query: 122 -------DSLTDLAVLKINAT-------GGLPTIPINARRVPHIGDVVLAIGNPYNLGQT 167
TDL+++K+ + I GD + +G PY T
Sbjct: 110 EINEAPYGGGTDLSIIKLKPNQYGKSAGDLVTPAAIPDNVDVQKGDKISLLGYPY---NT 166
Query: 168 ITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGI 215
T + + N Q F T+ GNSG + N GEL+GI
Sbjct: 167 STHSLYKS-QIEVFNNQTFQYFAYTE----PGNSGSGIFNLHGELVGI 209
>3I18-A nrPDB
Length = 100
Score = 44.7 bits (104), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 280 QGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDD 339
G+ V V D PAA+ + DLI +D S+ E +D + + G + + D
Sbjct: 7 DGVYVMSVKDDVPAADV-LHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGD 65
Query: 340 KQLTLQVTIQ 349
K + +
Sbjct: 66 KNEQADIKLT 75
>4FGM-A nrPDB
Length = 597
Score = 43.5 bits (101), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 280 QGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDD 339
QG+ V V D A +AG+ D II++D+ A + PG + + R D
Sbjct: 496 QGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQATEQS-VKRILERYIPGDTVTIHAFRRD 554
Query: 340 KQLTLQVTIQE 350
+ +TL++T QE
Sbjct: 555 ELMTLELTWQE 565
>5E6P-B nrPDB
Length = 88
Score = 43.5 bits (101), Expect = 1e-04, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 282 IVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVM 336
++V V P G A AG++ D II V+ ++ + V I+ G+ + + ++
Sbjct: 30 VLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHL-EVVKLIKSGAYVALTLL 83
>2DLS-A nrPDB
Length = 93
Score = 43.1 bits (100), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 282 IVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVM 336
++V V P G A AG++ D II V+ ++ + V I+ G+ + + ++
Sbjct: 31 VLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHL-EVVKLIKSGAYVALTLL 84
>4C2G-A nrPDB
Length = 446
Score = 42.4 bits (98), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 291 GPAANAGIQVNDLIISVDNKPAISALETMDQVAEIR--PGSVIPVVVMRDD--KQLTLQV 346
PA AG++ ND IIS++ + + V +IR GS + + + R KQL+ ++
Sbjct: 92 SPAEKAGLKPNDEIISINGESMA-GKDLNHAVLKIRGKKGSSVSMKIQRPGTKKQLSFRI 150
Query: 347 TIQEYP 352
E P
Sbjct: 151 KRAEIP 156
>4O06-A nrPDB
Length = 106
Score = 42.4 bits (98), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 282 IVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSV--IPVVVMRDD 339
++EV P P+ A I+V+D +IS+ N A + + + + +PV+++R+
Sbjct: 21 AFISEVVPGSPSDKADIKVDDKLISIGNVHAANHSKLQNIQMVVMKNEDRPLPVLLLREG 80
Query: 340 KQLTLQVTIQ 349
+ L +T
Sbjct: 81 QILKTSLTPS 90
>2XKX-A nrPDB
Length = 721
Score = 41.6 bits (96), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 254 VIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPA 312
+ RG G+G G + +GI ++ + GPA +G ++ D I+SV+
Sbjct: 313 IHRGSTGLGF--------NIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDL 364
Query: 313 ISALETMDQVAEIRPGSVIPVV 334
+A +A G + ++
Sbjct: 365 RNASHEQAAIALKNAGQTVTII 386
Score = 35.8 bits (81), Expect = 0.029, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Query: 272 QGGGIDQLQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAISALETMDQVAEIRPGSV 330
I I + ++ P G AA G ++VND I+ V+ + A GS+
Sbjct: 81 DNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSI 140
Query: 331 IPVVVMRDDKQLTLQVTIQEYPAT 354
+ + VMR + I+
Sbjct: 141 VRLYVMRRKPPAEKVMEIKLIKGP 164
>2EAQ-A nrPDB
Length = 90
Score = 41.2 bits (95), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 278 QLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAI--SALETMDQVAEIRPGSVIPVVV 335
+ GI V V PA + +QV+D II+++N + E + +A+ + + + V
Sbjct: 26 DIPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDV 85
Query: 336 MRDDK 340
R K
Sbjct: 86 RRYGK 90
>2PKT-A nrPDB
Length = 91
Score = 41.2 bits (95), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 274 GGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPV 333
GG D Q + ++ V+P AA A + + D+I ++D + + Q + +
Sbjct: 21 GGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTL 80
Query: 334 VVMRDDKQLTL 344
V R + + L
Sbjct: 81 TVARSEHESDL 91
>2HLC-A nrPDB
Length = 230
Score = 40.1 bits (92), Expect = 0.001, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 80/204 (39%), Gaps = 34/204 (16%)
Query: 62 YNRGLNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGS 121
Y GL+ +Q + GS ++D + +I+T H ++DA ++V L +E V +
Sbjct: 14 YQAGLDITLQDQRRVWCGGS--LIDNK-WILTAAHCVHDAVSVVVYLGSAVQYEGEAVVN 70
Query: 122 DSL-------------TDLAVLKI---NATGGLPTIPINARRVPHIG-DVVLAIGNPYNL 164
D+A++KI T + I + + + + + A + +
Sbjct: 71 SERIISHSMFNPDTYLNDVALIKIPHVEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQ 130
Query: 165 GQTITQGIISATGRIGLNPTGRQNF---LQTDASI----------NHGNSGGALVNSLGE 211
T T + + N Q + + +++I G+SGG V S
Sbjct: 131 SNTDTVILQYTYNLVIDNDRCAQEYPPGIIVESTICGDTSDGKSPCFGDSGGPFVLSDKN 190
Query: 212 LMGINTLSFDKSNDGETPEGIGFA 235
L+ I +SF E+ + +GF+
Sbjct: 191 LL-IGVVSFVSGAGCESGKPVGFS 213
>1UEZ-A nrPDB
Length = 101
Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 12/73 (16%)
Query: 274 GGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPV 333
GG + GI V+ V P A G++V D I+ V++K R V
Sbjct: 29 GGSEHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLA------------RVTHAEAV 76
Query: 334 VVMRDDKQLTLQV 346
++ K+L L V
Sbjct: 77 KALKGSKKLVLSV 89
>1FC9-A nrPDB
Length = 388
Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 282 IVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVM 336
+VV +P GPA AG + D+I++VD L D ++ + V V+
Sbjct: 101 VVVLTPAPGGPAEKAGARAGDVIVTVDGTAVK-GLSLYDVSDLLQGEADSQVEVV 154
>2V90-A nrPDB
Length = 96
Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 30/78 (38%)
Query: 269 LHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPG 328
L + G+D G + EV P PA AG+Q D +++V + G
Sbjct: 19 LLREEKGLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQG 78
Query: 329 SVIPVVVMRDDKQLTLQV 346
S + + V+ + V
Sbjct: 79 SCVSLTVVDPEADRETSV 96
>2L4S-A nrPDB
Length = 124
Score = 38.5 bits (88), Expect = 0.004, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 236 IPFQLATKIMDKLI----RDGR-VIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPD 290
IP Q T ++ ++ R G +I G+ GG + P +GI V VS
Sbjct: 4 IPGQPVTAVVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEG 63
Query: 291 GPAANAGIQVNDLIISVDN 309
GPA AG+Q+ D I+ V+
Sbjct: 64 GPAEIAGLQIGDKIMQVNG 82
>2VZ5-A nrPDB
Length = 139
Score = 38.1 bits (87), Expect = 0.006, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 239 QLATKIMDKLIRDGR-VIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAG 297
+ ++ +R G +I G+ GG + P +GI V VS GPA AG
Sbjct: 22 SMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG 81
Query: 298 IQVNDLIISVDN 309
+Q+ D I+ V+
Sbjct: 82 LQIGDKIMQVNG 93
>2QBW-A nrPDB
Length = 195
Score = 37.8 bits (86), Expect = 0.007, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Query: 271 AQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSV 330
GI V V P+GPA+ +Q D II + I+ +
Sbjct: 15 RGNPFRPDDDGIFVTRVQPEGPASKL-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNT 73
Query: 331 IPVVVMRD 338
+ ++++R+
Sbjct: 74 VELIIVRE 81
>3K1R-A nrPDB
Length = 192
Score = 37.8 bits (86), Expect = 0.007, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 281 GIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVM 336
G+ ++ + G A + G+QV D I+ ++ S + + IR + + V
Sbjct: 111 GLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTH-EEVINLIRTEKTVSIKVR 165
>3CH8-A nrPDB
Length = 195
Score = 37.8 bits (86), Expect = 0.007, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Query: 271 AQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSV 330
GI V V P+GPA+ +Q D II + I+ +
Sbjct: 16 RGNPFRPDDDGIFVTRVQPEGPASKL-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNT 74
Query: 331 IPVVVMRD 338
+ ++++R+
Sbjct: 75 VELIIVRE 82
>3TSW-A nrPDB
Length = 391
Score = 37.4 bits (85), Expect = 0.009, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 281 GIVVNEVSPDGPAANAGIQVNDLIISVDNKPAIS--ALETMDQVAEIRPGSVIPV 333
GI V V D PAA G++ D I+ V+N + E + + ++ G + +
Sbjct: 32 GIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTI 86
>3SHW-A nrPDB
Length = 468
Score = 37.4 bits (85), Expect = 0.009, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 281 GIVVNEVSPDGPAANAGIQVNDLIISVDNKPAIS--ALETMDQVAEIRPGSVIPV 333
GI V V D PAA G++ D I+ V+N + E + + ++ G + +
Sbjct: 24 GIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTI 78
>1MFG-A nrPDB
Length = 95
Score = 37.0 bits (84), Expect = 0.012, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Query: 271 AQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSV 330
GI V V P+GPA+ +Q D II + I+ +
Sbjct: 26 RGNPFRPDDDGIFVTRVQPEGPASKL-LQPGDKIIQANGYSFINIEHGQAVSLLKTFQNT 84
Query: 331 IPVVVMRD 338
+ ++++R+
Sbjct: 85 VELIIVRE 92
>1M5Z-A nrPDB
Length = 91
Score = 37.0 bits (84), Expect = 0.014, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 26/59 (44%)
Query: 280 QGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRD 338
+G+ V + P GP G++ D ++ V++ + G+ + +V+ R+
Sbjct: 32 KGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN 90
>3CYY-A nrPDB
Length = 92
Score = 36.6 bits (83), Expect = 0.015, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 282 IVVNEVSPDGPAAN-AGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDK 340
I V E+S D AA IQ D+++ ++ + T + R + +VV RD++
Sbjct: 25 IFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRDER 84
Query: 341 QLTLQV 346
L V
Sbjct: 85 ATLLNV 90
>4Q2Q-A nrPDB
Length = 102
Score = 36.6 bits (83), Expect = 0.015, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 281 GIVVNEVSPDGPAANAGIQVNDLIISVDNKPAIS--ALETMDQVAEIRPGSVIPV 333
GI V V D PAA G++ D I+ V+N + E + + ++ G + +
Sbjct: 30 GIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTI 84
>5G1D-A nrPDB
Length = 201
Score = 36.6 bits (83), Expect = 0.015, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 281 GIVVNEVSPDGPAANAGIQVNDLIISVDNKPAIS-ALETMDQVAEIRPGSVIPVVVMRDD 339
GI V V + PA+ G++ D ++ ++ + + + +V + G I + + D
Sbjct: 38 GIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIR--D 95
Query: 340 KQLTLQVTI 348
+ VT+
Sbjct: 96 RPFERTVTM 104
>2KBS-A nrPDB
Length = 92
Score = 36.6 bits (83), Expect = 0.017, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 278 QLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVM 336
Q GI ++ V P +A G+++ D I+ V+ + L+ + V ++ + + ++
Sbjct: 25 QKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSN-LDHKEAVNVLKSSRSLTISIV 82
>5N7D-A nrPDB
Length = 427
Score = 36.6 bits (83), Expect = 0.017, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 15/105 (14%)
Query: 237 PFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANA 296
P +L K + +R G+ +GG E + + DGPAA
Sbjct: 12 PSELKGKFIHTKLRKSSRGFGFTVVGGDEPDEFLQ------------IKSLVLDGPAALD 59
Query: 297 G-IQVNDLIISVDNKPAI--SALETMDQVAEIRPGSVIPVVVMRD 338
G ++ D+I+SV++ + + + + I G+ + + + R
Sbjct: 60 GKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRG 104
>5A2P-A nrPDB
Length = 163
Score = 36.6 bits (83), Expect = 0.018, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 281 GIVVNEVSPDGPAANAGIQVNDLIISVDNKPAIS-ALETMDQVAEIRPGSVIPVVVMRDD 339
GI V V + PA+ G++ D ++ ++ + + + +V + G I + + D
Sbjct: 26 GIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIR--D 83
Query: 340 KQLTLQVTI 348
+ VT+
Sbjct: 84 RPFERTVTM 92
>1X5N-A nrPDB
Length = 114
Score = 36.2 bits (82), Expect = 0.020, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 278 QLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVM 336
Q GI ++ V P +A G+++ D I+ V+ + L+ + V ++ + + ++
Sbjct: 39 QKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSN-LDHKEAVNVLKSSRSLTISIV 96
>5ZDS-A nrPDB
Length = 96
Score = 36.2 bits (82), Expect = 0.022, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 281 GIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDD 339
GI V + P GPAA G I D ++ VD PG V +V+ R
Sbjct: 37 GIYVKSIIPGGPAAKEGQILQGDRLLQVDGVSLCGLTHKQAVQCLKGPGQVARLVLERRG 96
>3TSV-A nrPDB
Length = 124
Score = 36.2 bits (82), Expect = 0.024, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 281 GIVVNEVSPDGPAANAGIQVNDLIISVDNKPAIS--ALETMDQVAEIRPGSVIPV 333
GI V V D PAA G++ D I+ V+N + E + + ++ G + +
Sbjct: 52 GIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTI 106
>1UEQ-A nrPDB
Length = 123
Score = 35.8 bits (81), Expect = 0.028, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 284 VNEVSPDGPAANAG-IQVNDLIISVDNKPAI--SALETMDQVAEIRPGSVIPVVVMRD 338
V V PDGPAA G ++ D+I+ ++ + + + + + G + +V+ R
Sbjct: 48 VKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCRG 105
>1UF1-A nrPDB
Length = 128
Score = 35.4 bits (80), Expect = 0.035, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 281 GIVVNEVSPDGPAANAGIQVNDLIISVDNKPAIS 314
GI + V P A +G++V D I+ V+ + ++
Sbjct: 47 GIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLN 80
>4XZY-A nrPDB
Length = 720
Score = 35.4 bits (80), Expect = 0.038, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 199 GNSGGALVNSLGELMGINT 217
GNSG ++N+ GEL+G+N
Sbjct: 653 GNSGSPVMNANGELIGLNF 671
>3SHU-A nrPDB
Length = 95
Score = 35.1 bits (79), Expect = 0.043, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 281 GIVVNEVSPDGPAANAGIQVNDLIISVDNKPAIS--ALETMDQVAEIRPGSVIPV 333
GI V V D PAA G++ D I+ V+N + E + + ++ G + +
Sbjct: 27 GIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTI 81
>1NPM-A nrPDB
Length = 225
Score = 35.1 bits (79), Expect = 0.045, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 60/182 (32%), Gaps = 36/182 (19%)
Query: 82 GVIMDQRGYIITNKHVINDADQIIV-----ALQDGRVFEALLVGS------------DSL 124
GV++ R +++T H + + +D E + S D
Sbjct: 28 GVLVGDR-WVLTAAHCKKQKYSVRLGDHSLQSRDQPEQEIQVAQSIQHPCYNNSNPEDHS 86
Query: 125 TDLAVLKINATGGL--PTIPINARRV-PHIGDVVLAIG-----NPY-NLGQTIT---QGI 172
D+ ++++ + L P+ + P +G + G +P N T+ I
Sbjct: 87 HDIMLIRLQNSANLGDKVKPVQLANLCPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKI 146
Query: 173 ISATGRIGLNPTGRQNFLQTDASIN-----HGNSGGALVNSLGELMGINTLSFDKSNDGE 227
S P + S N G+SGG LV G L GI + D E
Sbjct: 147 YSQNKCERAYPGKITEGMVCAGSSNGADTCQGDSGGPLV-CDGMLQGITSWGSDPCGKPE 205
Query: 228 TP 229
P
Sbjct: 206 KP 207
>3BPU-A nrPDB
Length = 88
Score = 35.1 bits (79), Expect = 0.051, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 281 GIVVNEVSPDGPAANAGIQVNDLIISVDNKPAI--SALETMDQVAEIRPGSVIPVVVMRD 338
G V ++ D P + G++ DLI+ V+ K + + +D + E GS + ++V R
Sbjct: 28 GQRVKQIV-DSPRSR-GLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTLLVQRQ 85
Query: 339 DK 340
+
Sbjct: 86 TR 87
>2LOB-A nrPDB
Length = 112
Score = 34.7 bits (78), Expect = 0.059, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 274 GGIDQLQGIVVNEVSPDGPAAN-AGIQVNDLIISVDNKPAISA--LETMDQVAEIR 326
GG + I+++E+ P PA G+ V D I++V+ E + +++ R
Sbjct: 47 GGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQR 102
>5JXF-A nrPDB
Length = 731
Score = 34.3 bits (77), Expect = 0.073, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 199 GNSGGALVNSLGELMGINT 217
GNSG V++ G L+G+N
Sbjct: 660 GNSGSPAVDAQGNLIGLNF 678
>5JWG-A nrPDB
Length = 703
Score = 34.3 bits (77), Expect = 0.078, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 199 GNSGGALVNSLGELMGINT 217
GN+G ++N+ GEL+G+N
Sbjct: 630 GNAGSPVMNARGELIGLNF 648
>3K50-A nrPDB
Length = 403
Score = 34.3 bits (77), Expect = 0.079, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Query: 277 DQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVV 335
D +++ V P PA AG+Q I+ ++ +E +E+ GS + +
Sbjct: 87 DTAYNALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKVE-----SELLQGSTRQLQI 140
>2RCZ-A nrPDB
Length = 81
Score = 34.3 bits (77), Expect = 0.085, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 282 IVVNEVSPDGPAAN-AGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRD 338
I V E+S D AA IQ D+++ ++ + T + R + +VV RD
Sbjct: 23 IFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRD 80
>2DC2-A nrPDB
Length = 103
Score = 33.9 bits (76), Expect = 0.11, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 274 GGIDQLQGIVVNEVSPDGPAAN-AGIQVNDLIISVDNKPAISA 315
GG + I+++E+ P PA G+ V D I++V+
Sbjct: 29 GGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDT 71
>2R4H-A nrPDB
Length = 112
Score = 33.9 bits (76), Expect = 0.11, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 274 GGIDQLQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAISALETMDQVAEIRPGSVIP 332
GG + + V ++ DGPA +G +++ D I+ ++ + + + G +
Sbjct: 43 GGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGRRVR 102
Query: 333 VVVMRD 338
+ + R
Sbjct: 103 LFLKRG 108
>3WOM-A nrPDB
Length = 698
Score = 33.9 bits (76), Expect = 0.11, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 176 TGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINT 217
RIG P N+L +D I GNSG ++++ G+L+G+
Sbjct: 612 DKRIGSVP---VNYL-SDLDITGGNSGSPVLDAHGKLVGLAF 649
>4JOF-A nrPDB
Length = 87
Score = 33.9 bits (76), Expect = 0.12, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 274 GGIDQLQGIVVNEVSPDGPAAN-AGIQVNDLIISVDNKPAISA 315
GG + I+++E+ P PA G+ V D I++V+
Sbjct: 22 GGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDT 64
>3G8Q-A nrPDB
Length = 278
Score = 33.5 bits (75), Expect = 0.13, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 15/95 (15%)
Query: 273 GGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGS--- 329
G G+ V EV PD P + D++++ P ++ + +V + G
Sbjct: 92 GPYYLARSGVEVVEVHPDEPLGYDPVDRLDVLLTFGGNPYLTEEDVAARVYCLLTGRGFD 151
Query: 330 ------------VIPVVVMRDDKQLTLQVTIQEYP 352
+ ++V R D +++ +E P
Sbjct: 152 ADIAPAPENLSGRVEIMVTRGDPDEAVELLKEELP 186
>3SOE-A nrPDB
Length = 113
Score = 33.5 bits (75), Expect = 0.14, Method: Composition-based stats.
Identities = 7/47 (14%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 297 GIQVNDLIISVDNKPAISAL--ETMDQVAEIRPGSVIPVVVMRDDKQ 341
G+Q D+I + ++ + + ++ + + G+ +P++++R
Sbjct: 49 GLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLILRGGPP 95
>5HJ1-A nrPDB
Length = 103
Score = 33.5 bits (75), Expect = 0.15, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 286 EVSPDGPAA---NAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQL 342
++P A+ +G+Q NDL I+++ + + + + I + V R+ ++
Sbjct: 35 RLNPGKDASLFRQSGLQANDLAIALNGIDLRDQEQAQQALQNLADMTEITLTVEREGQRH 94
Query: 343 TLQVTIQE 350
+ + +
Sbjct: 95 DIAFALGD 102
>2LC7-A nrPDB
Length = 102
Score = 33.5 bits (75), Expect = 0.16, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 259 IGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQ-VNDLIISVDNKPAISALE 317
+G R+ + G+++ GI ++ + P G A + G+ VND +I V+ A +
Sbjct: 19 LGFYIRDGTSVRVTASGLEKQPGIFISRLVPGGLAESTGLLAVNDEVIEVNGIEV--AGK 76
Query: 318 TMDQVAEIRPGSVIPVVV 335
T+DQV ++ + +++
Sbjct: 77 TLDQVTDMMVANSSNLII 94
>3H7F-A nrPDB
Length = 447
Score = 33.1 bits (74), Expect = 0.18, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 89/273 (32%), Gaps = 44/273 (16%)
Query: 110 DGRVFEALLVGSDSLT---DLAVLKINATGGLPTIPI-NARRVPHIGDVV---------- 155
G+++E G D T D+ ++ A P + I P + D
Sbjct: 154 SGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVG 213
Query: 156 -------------LAIG---NPYNLGQTITQGIISATG--RIGLNPTGRQNFLQTDASIN 197
+A G +P ++ + G R GL +Q ++++
Sbjct: 214 AKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGGGRSGLIVGKQQYAKAINSAVF 273
Query: 198 HGNSGGALVN-SLGELMGINTLSFDKSNDGETPEGIGFAIPFQL-----ATKIMDKLIRD 251
G GG L++ G+ + + + + D + G I K ++
Sbjct: 274 PGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSG 333
Query: 252 GRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVS----PDGPAANAGIQVNDLIISV 307
G + + + R+ + GI VN + P P +G+++ ++
Sbjct: 334 GTDVHLVL-VDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALAT 392
Query: 308 DNKPAISALETMDQVAE-IRPGSVIPVVVMRDD 339
E D +A + GS + V ++D
Sbjct: 393 RGFGDTEFTEVADIIATALATGSSVDVSALKDR 425
>1RY4-A nrPDB
Length = 128
Score = 33.1 bits (74), Expect = 0.19, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Query: 236 IPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAAN 295
I + + ++ +G R+ + G+++ GI ++ + P G A +
Sbjct: 22 IDVDIVPETHRRVRLLKHGSDKPLGFYIRDGTSVRVTASGLEKQPGIFISRLVPGGLAES 81
Query: 296 AGIQ-VNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVV 335
G+ VND +I V+ A +T+DQV ++ + +++
Sbjct: 82 TGLLAVNDEVIEVNGIEV--AGKTLDQVTDMMVANSSNLII 120
>3QDO-A nrPDB
Length = 109
Score = 33.1 bits (74), Expect = 0.19, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 284 VNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSV 330
V+ V P G A AG++ D I+ V+ A V IR G
Sbjct: 47 VSAVLPGGAADRAGVRKGDRILEVNGVNVEGATH-KQVVDLIRAGEK 92
>2QT5-A nrPDB
Length = 200
Score = 33.1 bits (74), Expect = 0.20, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 51/134 (38%), Gaps = 11/134 (8%)
Query: 214 GINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAP---LH 270
GIN F + +G + ++ ++ I+ V+ + + +
Sbjct: 63 GINLAKFRHDEIISLLKNVGERVVLEVEYELPPVSIQGSSVMFRTVEVTLHKEGNTFGFV 122
Query: 271 AQGGGIDQL---QGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPA--ISALETMDQVAE 324
+GG D + +V+ V P GPA G I+ D ++SVD + E M + +
Sbjct: 123 IRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ 182
Query: 325 IRPGSVIPVVVMRD 338
G +++ D
Sbjct: 183 C--GQEATLLIEYD 194
>3WYB-A nrPDB
Length = 334
Score = 32.7 bits (73), Expect = 0.23, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 112 RVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGNPYNL-GQTITQ 170
F+A+ ++ +A++ + G + R+ G+VVL +GN Y G+ ++Q
Sbjct: 101 DYFDAVNAAAEQSGKVAIISV----GWDPGLFSLNRLL--GEVVLPVGNTYTFWGKGVSQ 154
Query: 171 GIISATGRIGLNPTGRQNFLQTDASINHGNSG 202
G A RI Q + D ++N SG
Sbjct: 155 GHSDAIRRIQGVKNAVQYTIPIDEAVNRVRSG 186
>2D8I-A nrPDB
Length = 114
Score = 32.7 bits (73), Expect = 0.23, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 272 QGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAI--SALETMDQVAEIRPG 328
D ++ + VN V G A+ G++ D I+ ++N+ A ++ D +++ G
Sbjct: 36 SSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQPSLG 94
>1NF3-C nrPDB
Length = 128
Score = 32.4 bits (72), Expect = 0.31, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 41/97 (42%), Gaps = 4/97 (4%)
Query: 242 TKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQ-V 300
T +L + G +G R+ + + G++++ GI ++ + P G A + G+ V
Sbjct: 29 THRRVRLCKYG--TEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAV 86
Query: 301 NDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMR 337
ND ++ V+ S + S ++ +R
Sbjct: 87 NDEVLEVNGIEV-SGKSLDQVTDMMIANSRNLIITVR 122
>1UJV-A nrPDB
Length = 96
Score = 32.4 bits (72), Expect = 0.31, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 297 GIQVNDLIISVDNKPAISAL--ETMDQVAEIRPGSVIPVVVMRDDKQ 341
G+ DLI+ ++ + + E +D + + GS +++ R
Sbjct: 47 GLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRGSGP 93
>2JIL-A nrPDB
Length = 97
Score = 32.4 bits (72), Expect = 0.34, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 282 IVVNEVSPDGPAANAG-IQVNDLIISVDNKPA--ISALETMDQVAEIRPGSVIPVVVMRD 338
+V+ V P GPA G I+ D ++SVD + E M + + G +++ D
Sbjct: 34 VVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQC--GQEAALLIEYD 91
>1WFV-A nrPDB
Length = 103
Score = 32.4 bits (72), Expect = 0.34, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Query: 274 GGIDQLQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAISALETMDQVAEIRPGSVIP 332
GG + + V ++ DGPA G ++V D II ++ + G +
Sbjct: 30 GGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVR 89
Query: 333 VVVMRD 338
+++ R
Sbjct: 90 LLLKRG 95
>6FAH-A nrPDB
Length = 396
Score = 31.6 bits (70), Expect = 0.47, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 58/157 (36%), Gaps = 14/157 (8%)
Query: 167 TITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGA---LVNSLGELMGINTLSFDKS 223
T+ G+ + +P+ + ++ DA+ N G+ +V + + + I+ F S
Sbjct: 225 TVRPGV---MDKAAYDPSQKGEVIKLDATFNEGDIRTKVLEIVKTTTDNISISDADFIVS 281
Query: 224 NDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGIDQLQGIV 283
+ GF +L ++ DKL R + G + A G I
Sbjct: 282 GGMGLGKPEGF----ELLKQLADKLGGTVATSRACVDAGWADHA-QQVGQTGTTVKPQIY 336
Query: 284 VNEVSPDGPAANAGIQVNDLIISVD---NKPAISALE 317
AG+Q +D+II+++ N P +
Sbjct: 337 FACGISGAIQHIAGMQDSDIIIAINKNENAPIFEVAD 373
>4NXP-A nrPDB
Length = 94
Score = 31.6 bits (70), Expect = 0.50, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 272 QGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPA 312
D ++ + VN V G A+ G++ D I+ ++N+ A
Sbjct: 27 SSVEEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAA 67
>1U3B-A nrPDB
Length = 185
Score = 31.2 bits (69), Expect = 0.68, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Query: 262 GGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAIS--ALET 318
G + + + G L +++ + GPA +G + + D I+S++ +
Sbjct: 11 KGEILGVVIVESGWGSILPTVIIANMMHGGPAEKSGKLNIGDQIMSINGTSLVGLPLSTC 70
Query: 319 MDQVAEIRPGSVIPVVVMR 337
+ ++ S + + ++R
Sbjct: 71 QSIIKGLKNQSRVKLNIVR 89
Score = 28.9 bits (63), Expect = 3.2, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Query: 268 PLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAI 313
P G GI + + G A G++V II ++ + +
Sbjct: 101 PDLRYQLGFSVQNGI-ICSLMRGGIAERGGVRVGHRIIEINGQSVV 145
>1X5R-A nrPDB
Length = 112
Score = 31.2 bits (69), Expect = 0.74, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Query: 283 VVNEVSPDGPAANAG-IQVNDLIISVDNKPAISAL--ETMDQVAEIRPGSVIPVVVMRDD 339
+V + PD PA G +QV D ++S++ E + + + + V D
Sbjct: 48 LVCFIEPDSPAERCGLLQVGDRVLSINGIATEDGTMEEANQLLRDAALAHKVVLEVEFDS 107
Query: 340 KQ 341
Sbjct: 108 GP 109
>2I6V-A nrPDB
Length = 87
Score = 31.2 bits (69), Expect = 0.79, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Query: 286 EVSPDGPA---ANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQL 342
VSP + G+Q D+ ++++ + + + + V RD +Q
Sbjct: 22 RVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQH 81
Query: 343 TLQV 346
+ +
Sbjct: 82 DVYI 85
>2WV5-A nrPDB
Length = 214
Score = 30.8 bits (68), Expect = 0.84, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 10/126 (7%)
Query: 113 VFEALLVGSDSLTDLAVLKINATGGLPTIP--INARRVPHIGDVVLAIGNPYNLGQTITQ 170
FE + G D L+D A++ ++ + I G V+ + N ++G+ I
Sbjct: 72 EFEIKVKGQDMLSDAALMVLHRGNKVRDITKHFRDTARMKKGTPVVGVVNNADVGRLIFS 131
Query: 171 GIISATGRIGLNPTGRQ--NFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGET 228
G I + G A+ G +GGA++ G +F
Sbjct: 132 GEALTYKDIVVLMDGDTMPGLFAYKAATRAGYAGGAVLAKDG------ADTFIVGTHSAG 185
Query: 229 PEGIGF 234
G+G+
Sbjct: 186 GNGVGY 191
>1CT4-E nrPDB
Length = 185
Score = 30.8 bits (68), Expect = 0.88, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 42/135 (31%), Gaps = 11/135 (8%)
Query: 78 TLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLK-----I 132
+LG V Y +T H + A V S D +++ I
Sbjct: 15 SLGFNVRSGSTYYFLTAGHCTDGATTWWANSARTTVLGTTSGSSFPNNDYGIVRYTNTTI 74
Query: 133 NATGGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNF--L 190
G + I + +G V G+ G ++A G + +
Sbjct: 75 PKDGTVGGQDITSAANATVGMAVTRRGSTTGTH----SGSVTALNATVNYGGGDVVYGMI 130
Query: 191 QTDASINHGNSGGAL 205
+T+ G+SGG L
Sbjct: 131 RTNVCAEPGDSGGPL 145
>2I4S-A nrPDB
Length = 105
Score = 30.8 bits (68), Expect = 0.97, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Query: 286 EVSPDGPA---ANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQL 342
VSP + G+Q D+ ++++ + + + + V RD +Q
Sbjct: 40 RVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQH 99
Query: 343 TLQV 346
+ +
Sbjct: 100 DVYI 103
>2SGA-A nrPDB
Length = 181
Score = 30.8 bits (68), Expect = 1.0, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 13/135 (9%)
Query: 78 TLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGG 137
+LG V ++ + +T H N + + + G F G ++ A A G
Sbjct: 15 SLGFNVSVNGVAHALTAGHCTNISASWSIGTRTGTSFPNNDYGIIRHSNPA-----AADG 69
Query: 138 LPTIPINARRVPH------IGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQ 191
+ + + +G V G+ L G+ + +Q
Sbjct: 70 RVYLYNGSYQDITTAGNAFVGQAVQRSGSTTGLRSGSVTGLNATVNYGSSGI--VYGMIQ 127
Query: 192 TDASINHGNSGGALV 206
T+ G+SGG+L
Sbjct: 128 TNVCAQPGDSGGSLF 142
>1PQ7-A nrPDB
Length = 224
Score = 30.4 bits (67), Expect = 1.1, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 60/160 (37%), Gaps = 38/160 (23%)
Query: 91 IITNKHVINDADQIIVALQDG---RVFEALLVG----------SDSLTDLAVLKINAT-- 135
++T H ++ Q ++ G R + S + DLA+LK++ +
Sbjct: 36 VLTAAHCVSGYAQSGFQIRAGSLSRTSGGITSSLSSVRVHPSYSGNNNDLAILKLSTSIP 95
Query: 136 --GGLPTIPINAR-RVPHIGDVVLAIG----------NPYNLGQTITQGIIS-ATGRIGL 181
G + + A P G G P NL + +T I+S AT R
Sbjct: 96 SGGNIGYARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLK-VTVPIVSRATCRAQY 154
Query: 182 NPTGRQNFLQTDASINHG-------NSGGALVNSLGELMG 214
+ N + A ++ G +SGG +V+S L+G
Sbjct: 155 GTSAITNQMFC-AGVSSGGKDSCQGDSGGPIVDSSNTLIG 193
>3SUZ-A nrPDB
Length = 388
Score = 30.4 bits (67), Expect = 1.1, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 268 PLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISAL 316
P G GI + + G A G++V II ++ + ++
Sbjct: 304 PDLKYQLGFSVQNGI-ICSLMRGGIAERGGVRVGHRIIEINGQSVVATA 351
>1U37-A nrPDB
Length = 89
Score = 30.4 bits (67), Expect = 1.2, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Query: 262 GGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAIS--ALET 318
G + + + G L +++ + GPA +G + + D I+S++ +
Sbjct: 11 KGEILGVVIVESGWGSILPTVIIANMMHGGPAEKSGKLNIGDQIMSINGTSLVGLPLSTC 70
Query: 319 MDQVAEIRPGSVIPVVVMR 337
+ ++ S + + ++R
Sbjct: 71 QSIIKGLKNQSRVKLNIVR 89
>1ZZM-A nrPDB
Length = 259
Score = 30.1 bits (66), Expect = 1.5, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 18/56 (32%)
Query: 139 PTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGRQNFLQTDA 194
+ + + +G +G TIT S T + L+TDA
Sbjct: 153 TGVVHGFSGSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDA 208
>4OEP-A nrPDB
Length = 107
Score = 30.1 bits (66), Expect = 1.8, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 282 IVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMR 337
IV+++V GPA +Q ND + V+ + + G + + R
Sbjct: 41 IVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRR 95
>2SFA-A nrPDB
Length = 191
Score = 29.7 bits (65), Expect = 1.8, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 6/58 (10%)
Query: 151 IGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTG--RQNFLQTDASINHGNSGGALV 206
+G V G+ L G ++ G +QT+ G+SGGAL
Sbjct: 99 VGQTVQRSGSTTGLH----SGRVTGLNATVNYGGGDIVSGLIQTNVCAEPGDSGGALF 152
>1Y7N-A nrPDB
Length = 90
Score = 29.7 bits (65), Expect = 1.9, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Query: 268 PLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAI 313
P G GI + + G A G++V II ++ + +
Sbjct: 20 PDLRYQLGFSVQNGI-ICSLMRGGIAERGGVRVGHRIIEINGQSVV 64
>5MV8-B nrPDB
Length = 130
Score = 29.7 bits (65), Expect = 2.1, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 263 GREIAPLHAQGGGIDQLQGIVVNEV--SPDGPAANAGIQVNDLIISVDNKPAISAL 316
+E + A GG+D G VV + GI D I++++ K
Sbjct: 37 KKEGSLDLALEGGVDSPIGKVVVSAVYERGAAERHGGIVKGDEIMAINGKIVTDYT 92
>3EGH-C nrPDB
Length = 170
Score = 29.7 bits (65), Expect = 2.1, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 281 GIVVNEVSPDGPAANAG-IQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRD 338
GI V V+ G A G IQVNDL++ VD + ++ + ++ R+
Sbjct: 112 GIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGRVRFMIGRE 170
>1UEW-A nrPDB
Length = 114
Score = 29.7 bits (65), Expect = 2.3, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 260 GIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAAN-AGIQVNDLIISVDNKPAIS 314
G G I+ L+ G + + PA A ++V D I++V+ + I+
Sbjct: 23 GFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIIN 78
>2WV9-A nrPDB
Length = 673
Score = 29.3 bits (64), Expect = 2.5, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 183 PTGRQNFLQTDASINHGNSGGALVNSLGELMGI 215
G + D I G SG +VNS GE++G+
Sbjct: 173 AHGEIGAVSLDYPI--GTSGSPIVNSNGEIIGL 203
>1V6B-A nrPDB
Length = 118
Score = 29.3 bits (64), Expect = 2.5, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 263 GREIAPLHAQGGGIDQLQG-IVVNEVSPDGPAAN-AGIQVNDLIISVDNKPAISAL 316
+E + A GG+D G +VV+ V G A G+ D I++++ K
Sbjct: 25 KKEGSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYT 80
>3GX9-A nrPDB
Length = 377
Score = 29.3 bits (64), Expect = 3.0, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Query: 29 LNPLSTPQFDSTDETPA---SYNLAVRRAAPA 57
L+P STP+ TDE P Y A +RA A
Sbjct: 147 LHPTSTPRALETDEIPGIVEDYRQAAQRAKRA 178
>2WZQ-A nrPDB
Length = 619
Score = 28.9 bits (63), Expect = 3.4, Method: Composition-based stats.
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 198 HGNSGGALVNSLGELMGI 215
G SG ++N G+++G+
Sbjct: 132 PGTSGSPIINKKGKVIGL 149
>1YJS-A nrPDB
Length = 419
Score = 28.9 bits (63), Expect = 3.7, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
Query: 160 NPYNLGQTITQGIISATG--RIGLNPTGRQNFLQTDASINHGNSGGALV 206
NP +T R G+ Q Q D +I G GG L+
Sbjct: 212 NPVPYAHFVTTTTHQTLRGPRGGMILCQEQFAKQIDKAIFPGIQGGPLM 260
>1U39-A nrPDB
Length = 80
Score = 28.5 bits (62), Expect = 4.4, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Query: 268 PLHAQGGGIDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAI 313
P G GI + + G A G++V II ++ + +
Sbjct: 11 PDLRYQLGFSVQNGI-ICSLMRGGIAERGGVRVGHRIIEINGQSVV 55
>1AZZ-A nrPDB
Length = 226
Score = 28.5 bits (62), Expect = 4.5, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 57/168 (33%), Gaps = 38/168 (22%)
Query: 82 GVIMDQRGYIITNKHVINDADQIIVAL--QDGRVFEALLVGSDSL--------------T 125
G ++ +I+T H ++ A + V L + R EA V S
Sbjct: 28 GSLISPE-WILTAAHCMDGAGFVDVVLGAHNIREDEATQVTIQSTDFTVHENYNSFVISN 86
Query: 126 DLAVLKINATGGLPTIPINA---RRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLN 182
D+AV+++ L +G VV G + L GI ++ +
Sbjct: 87 DIAVIRLPVPVTLTAAIATVGLPSTDVGVGTVVTPTG--WGLPSDSALGISDVLRQVDVP 144
Query: 183 PTGRQN-----FLQTDASI----------NHGNSGGALVNSLGELMGI 215
+ + TD +I +G+SGG L N G GI
Sbjct: 145 IMSNADCDAVYGIVTDGNICIDSTGGKGTCNGDSGGPL-NYNGLTYGI 191
>1GBE-A nrPDB
Length = 198
Score = 28.5 bits (62), Expect = 5.1, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 50/166 (30%), Gaps = 22/166 (13%)
Query: 92 ITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPT--------IPI 143
+T H + F A + D A + + + L + +
Sbjct: 32 VTAGHCGTVNATARIGGAVVGTFAARVF---PGNDRAWVSLTSAQTLLPRVANGSSFVTV 88
Query: 144 NARRVPHIGDVVLAIGNPYNLG-QTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSG 202
+G V G TIT ++A + Q +A G+SG
Sbjct: 89 RGSTEAAVGAAVCRSGRTTGYQCGTITAKNVTA----NYAEGAVRGLTQGNACAGRGDSG 144
Query: 203 GALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKL 248
G+ + S G+ G+ S G IP + + ++L
Sbjct: 145 GSWITSAGQAQGV------MSGLNVQSNGNNCGIPASQRSSLFERL 184
>3NK6-A nrPDB
Length = 277
Score = 28.1 bits (61), Expect = 5.4, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 8/98 (8%)
Query: 85 MDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDS--------LTDLAVLKINATG 136
+ G ++ + + AD+ ++ G VF +V +D D+A++ ++ G
Sbjct: 143 LGAAGIVLVDSDLATIADRRLLRASRGYVFSLPVVLADREEAVSFLRDNDIALMVLDTDG 202
Query: 137 GLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIIS 174
L + R G P L Q + G +S
Sbjct: 203 DLGVKDLGDRADRMALVFGSEKGGPSGLFQEASAGTVS 240
>1V62-A nrPDB
Length = 117
Score = 28.1 bits (61), Expect = 5.9, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Query: 282 IVVNEVSPDGPAANAG-IQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVM 336
I ++ + P +G + D I+S+D + + ++
Sbjct: 44 ITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLASISEKVRLEIL 99
>6N4D-A nrPDB
Length = 397
Score = 27.7 bits (60), Expect = 6.9, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Query: 197 NHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIR 256
N G G A N MG T+S D + ET + IG +++ ++I D
Sbjct: 274 NPGVKGWAFDNDNDVWMG-RTISKDLRSGYETFKVIGGWTTANSKSQVNRQVIVDNNNWS 332
Query: 257 GYIGIGGREIAPLHAQGGGIDQLQG 281
GY GI E + ++ ++G
Sbjct: 333 GYSGIFSVEGKSCVNRCFYVELIRG 357
>3BSF-A nrPDB
Length = 254
Score = 27.7 bits (60), Expect = 7.5, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Query: 169 TQGIIS-ATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELM 213
T G+ S T L +Q D IN G +GG + G +
Sbjct: 71 TLGVESVGTVPASLVTYASILAIQPDLIINAGTAGG--FKAKGACI 114
>1P3E-A nrPDB
Length = 215
Score = 27.7 bits (60), Expect = 8.6, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 51/164 (31%), Gaps = 27/164 (16%)
Query: 90 YIITNKHVINDADQIIVALQDGRVFEAL---------------------LVGSDSLTDLA 128
I+TN H + + + + G V+ + + S D A
Sbjct: 41 KILTNGHCVYNTASRSYSAK-GSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFA 99
Query: 129 VLKINAT--GGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNPTGR 186
V+K + + I G + G P + + G +S G
Sbjct: 100 VIKTDTNIGNTVGYRSIRQVTNL-TGTTIKISGYP--GDKMRSTGKVSQWEMSGSVTRED 156
Query: 187 QNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPE 230
N GNSG A+++ +++G++ + P+
Sbjct: 157 TNLAYYTIDTFSGNSGSAMLDQNQQIVGVHNAGYSNGTINGGPK 200
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.310 0.132 0.335
Lambda K H
0.267 0.0407 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,228,449
Number of Sequences: 36641
Number of extensions: 479292
Number of successful extensions: 1936
Number of sequences better than 10.0: 147
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 87
Number of HSP's that attempted gapping in prelim test: 1554
Number of HSP's gapped (non-prelim): 249
length of query: 355
length of database: 10,336,785
effective HSP length: 98
effective length of query: 257
effective length of database: 6,745,967
effective search space: 1733713519
effective search space used: 1733713519
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 60 (27.7 bits)