BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P0ACH5 (127 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1BL0-A nrPDB 266 2e-72 1D5Y-A nrPDB 111 1e-25 3OIO-A nrPDB 52 6e-08 4FE4-A nrPDB 44 2e-05 3LSG-A nrPDB 42 8e-05 5NLA-A nrPDB 40 2e-04 3OOU-A nrPDB 39 5e-04 2K9S-A nrPDB 38 0.001 3W6V-A nrPDB 34 0.019 1U8B-A nrPDB 33 0.047 5U8S-7 nrPDB 28 0.70 3MN2-A nrPDB 28 0.77 4CHU-A nrPDB 28 0.89 4CIC-A nrPDB 28 1.1 3IX0-A nrPDB 28 1.1 1BSF-A nrPDB 26 3.4 4Z53-A nrPDB 26 4.0 4JF0-A nrPDB 25 6.6 2C0S-A nrPDB 25 8.1 5XMC-A nrPDB 25 8.8 >1BL0-A nrPDB Length = 129 Score = 266 bits (680), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 127/127 (100%), Positives = 127/127 (100%) Query: 1 MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRS 60 MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRS Sbjct: 3 MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRS 62 Query: 61 RKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGESRFLH 120 RKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGESRFLH Sbjct: 63 RKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGESRFLH 122 Query: 121 PLNHYNS 127 PLNHYNS Sbjct: 123 PLNHYNS 129 >1D5Y-A nrPDB Length = 292 Score = 111 bits (277), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 51/101 (50%), Positives = 71/101 (70%) Query: 8 AITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIA 67 A I +L W+E +L+ PLSL+ V+ ++GYSKWHLQRMFK TGH++G YIR+R++++ A Sbjct: 2 AGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSA 61 Query: 68 QKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYR 108 L+ + PIL +A +Y F+SQQT TR FK F P YR Sbjct: 62 VALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYR 102 >3OIO-A nrPDB Length = 113 Score = 52.0 bits (123), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 53/99 (53%) Query: 15 LDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKLKESN 74 + +E N+E PLS + ++ G S+ L+R+FK+ G +Y ++ Q L++++ Sbjct: 13 VSLMEANIEEPLSTDDIAYYVGVSRRQLERLFKQYLGTVPSKYYLELRLNRARQLLQQTS 72 Query: 75 EPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQ 113 + I+ + GF S + T++N+F++ P + R Q Sbjct: 73 KSIVQIGLACGFSSGPHFSSTYRNHFNITPREERAQRAQ 111 >4FE4-A nrPDB Length = 392 Score = 43.5 bits (101), Expect = 2e-05, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 1/111 (0%) Query: 3 RRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRK 62 R TD I + + +I ++ + +++V + G S+ +L++ FK+E G ++ I + K Sbjct: 280 RSLTDPAVIQA-MHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEK 338 Query: 63 MTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQ 113 + + L + I +++ G+ S Q FK +D P +YR N + Sbjct: 339 LEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 >3LSG-A nrPDB Length = 103 Score = 41.6 bits (96), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 2/98 (2%) Query: 11 IHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKL 70 I +I++ E +S +L +SE+ S +L MFKK G Y+ ++M + L Sbjct: 7 IQNIIE--ESYTDSQFTLSVLSEKLDLSSGYLSIMFKKNFGIPFQDYLLQKRMEKAKLLL 64 Query: 71 KESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYR 108 + +AE+ GFE FK Y+ + P +YR Sbjct: 65 LTTELKNYEIAEQVGFEDVNYFITKFKKYYQITPKQYR 102 >5NLA-A nrPDB Length = 382 Score = 40.4 bits (93), Expect = 2e-04, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%) Query: 17 WIEDNLES-PLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKLKE--S 73 +I NL S L+ E + G S+ L ++F+ G + YIR R++ + +L + + Sbjct: 258 YIHLNLNSGDLTPETICRELGISRTRLYQLFEPSGG--VLNYIRRRRLLQAYAELSDPTN 315 Query: 74 NEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYR 108 N PI +AE GF+ TR F + F P + R Sbjct: 316 NRPIGEIAEAAGFDLAANFTRAFSHEFGASPREIR 350 >3OOU-A nrPDB Length = 108 Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 20/98 (20%), Positives = 48/98 (48%) Query: 11 IHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKL 70 I ++L +I ++ +SL+ + + +L ++F+KE G Y+ ++ ++L Sbjct: 7 IQNVLSYITEHFSEGMSLKTLGNDFHINAVYLGQLFQKEMGEHFTDYLNRYRVNYAKEEL 66 Query: 71 KESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYR 108 ++ + + +A + G+ R FK + P++YR Sbjct: 67 LQTKDNLTIIAGKSGYTDMAYFYRQFKKHTGETPNRYR 104 >2K9S-A nrPDB Length = 107 Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/99 (21%), Positives = 45/99 (45%), Gaps = 1/99 (1%) Query: 11 IHSILDWIEDNL-ESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQK 69 + +I D+L +S + V++ S L +F+++ G S+ + +++++ Sbjct: 5 VREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLL 64 Query: 70 LKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYR 108 L + PI + GF+ Q +R FK P ++R Sbjct: 65 LSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFR 103 >3W6V-A nrPDB Length = 147 Score = 33.9 bits (76), Expect = 0.019, Method: Compositional matrix adjust. Identities = 20/94 (21%), Positives = 45/94 (47%) Query: 11 IHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKL 70 + ++ W ++L +E ++ R+ S+ R F+ TG + Q++ ++++ + + L Sbjct: 40 LAEVVAWALEHLHEQFDVETLAARAYMSRRTFDRRFRSLTGSAPLQWLITQRVLQAQRLL 99 Query: 71 KESNEPILYLAERYGFESQQTLTRTFKNYFDVPP 104 + S+ + +A R GF S L F+ P Sbjct: 100 ETSDYSVDEVAGRCGFRSPVALRGHFRRQLGSSP 133 >1U8B-A nrPDB Length = 133 Score = 32.7 bits (73), Expect = 0.047, Method: Compositional matrix adjust. Identities = 12/29 (41%), Positives = 21/29 (72%) Query: 23 ESPLSLEKVSERSGYSKWHLQRMFKKETG 51 E+P++LE ++++ S +HL R+FK TG Sbjct: 91 ETPVTLEALADQVAMSPFHLHRLFKATTG 119 >5U8S-7 nrPDB Length = 845 Score = 28.5 bits (62), Expect = 0.70, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 51 GHSLGQYIRSRKMTEIAQKLKESNEPILYLAERYGFES-QQTLTRTF 96 G LGQ I R + +K + E I Y ++ G+E Q+ +RTF Sbjct: 232 GDFLGQLITVRGIITRVSDVKPAVEVIAYTCDQCGYEVFQEVNSRTF 278 >3MN2-A nrPDB Length = 108 Score = 28.5 bits (62), Expect = 0.77, Method: Compositional matrix adjust. Identities = 11/44 (25%), Positives = 26/44 (59%) Query: 10 TIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHS 53 + + ++IE N P+++EK++ +G S + + F++ G+S Sbjct: 3 AVRQVEEYIEANWMRPITIEKLTALTGISSRGIFKAFQRSRGYS 46 >4CHU-A nrPDB Length = 163 Score = 28.5 bits (62), Expect = 0.89, Method: Compositional matrix adjust. Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 13/77 (16%) Query: 10 TIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKK-------------ETGHSLGQ 56 + ++LD ++ P+ L +SER G S +L+++F + G+ LG+ Sbjct: 11 AVTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGK 70 Query: 57 YIRSRKMTEIAQKLKES 73 S + E+ + ES Sbjct: 71 DASSIAVGEVISAVDES 87 >4CIC-A nrPDB Length = 153 Score = 28.1 bits (61), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 13/80 (16%) Query: 11 IHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFK--------KETGHSLGQYIRSR- 61 + ++ D + E P+SL+ ++ER G S+ +L+++ K + G YI +R Sbjct: 15 VQAMFDLAQHFGEGPVSLKSIAERQGLSEPYLEQLIAVLRKAGLVKSVRGAQGGYILARE 74 Query: 62 ----KMTEIAQKLKESNEPI 77 K+ +I + L+ P+ Sbjct: 75 PRDIKVGDIIRVLEGPIAPV 94 >3IX0-A nrPDB Length = 94 Score = 28.1 bits (61), Expect = 1.1, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 7/41 (17%) Query: 16 DWIEDNLESPLSLEK-------VSERSGYSKWHLQRMFKKE 49 +W DN E+ E VS GY K + QR+FKKE Sbjct: 31 EWQTDNCETCTCYETEISCCTLVSTPVGYDKDNCQRIFKKE 71 >1BSF-A nrPDB Length = 278 Score = 26.2 bits (56), Expect = 3.4, Method: Compositional matrix adjust. Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 4/79 (5%) Query: 42 LQRMFKKETGHSLGQYIRSRKMTEIAQKLKESNEPILYLAERYGFESQQT-LTRTFKNYF 100 LQRM + TG+ LG+YI + + + ++ + ER FE+ + + K+++ Sbjct: 198 LQRMIAQVTGYELGEYIFNIGDCHVYTRHIDN---LKIQMEREQFEAPELWINPEVKDFY 254 Query: 101 DVPPHKYRMTNMQGESRFL 119 D +++ N + + L Sbjct: 255 DFTIDDFKLINYKHGDKLL 273 >4Z53-A nrPDB Length = 742 Score = 26.2 bits (56), Expect = 4.0, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 26/63 (41%) Query: 17 WIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKLKESNEP 76 WIEDN++ L V S L+ + + G I+ R + +I LK Sbjct: 230 WIEDNVKFTLEEATVFHMSNIQNMSLEDIMGERFGRYSKYIIQDRALPDIRDGLKPVQRR 289 Query: 77 ILY 79 ILY Sbjct: 290 ILY 292 >4JF0-A nrPDB Length = 422 Score = 25.4 bits (54), Expect = 6.6, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 3/62 (4%) Query: 27 SLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTE---IAQKLKESNEPILYLAER 83 +L + + G + WH R+F E LG+ + E E+NE LA Sbjct: 77 ALVEALKSQGETLWHTSRVFTNEPALRLGRKLIDATFAERVLFMNSGTEANETAFKLARH 136 Query: 84 YG 85 Y Sbjct: 137 YA 138 >2C0S-A nrPDB Length = 64 Score = 25.0 bits (53), Expect = 8.1, Method: Compositional matrix adjust. Identities = 7/31 (22%), Positives = 20/31 (64%) Query: 63 MTEIAQKLKESNEPILYLAERYGFESQQTLT 93 +T++ +++ + ++YL E+YGF + ++ Sbjct: 3 VTKLNDRIEAKKKELIYLVEKYGFTHHKVIS 33 >5XMC-A nrPDB Length = 722 Score = 25.0 bits (53), Expect = 8.8, Method: Compositional matrix adjust. Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 2/69 (2%) Query: 40 WHLQRMFKKETGHSLGQYIRSRKMTEIA--QKLKESNEPILYLAERYGFESQQTLTRTFK 97 W + E L Q++ + L SN P + E+ G E+ + T Sbjct: 632 WQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCF 691 Query: 98 NYFDVPPHK 106 N D+PP+K Sbjct: 692 NRLDLPPYK 700 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1BL0-A nrPDB 171 1e-43 4FE4-A nrPDB 139 3e-34 1D5Y-A nrPDB 135 5e-33 2K9S-A nrPDB 121 6e-29 3OOU-A nrPDB 116 2e-27 3OIO-A nrPDB 116 3e-27 5NLA-A nrPDB 105 4e-24 3LSG-A nrPDB 96 5e-21 Sequences not found previously or not previously below threshold: 3W6V-A nrPDB 65 7e-12 3MKL-A nrPDB 57 3e-09 3MN2-A nrPDB 55 1e-08 5CHH-A nrPDB 50 3e-07 3GBG-A nrPDB 49 6e-07 2PE4-A nrPDB 31 0.14 2G3B-A nrPDB 29 0.49 2ZOY-A nrPDB 29 0.67 2RAS-A nrPDB 28 0.87 1NEX-A nrPDB 28 0.95 1KU9-A nrPDB 28 1.3 4CIC-A nrPDB 27 1.5 6GSA-C nrPDB 27 1.5 3MWA-A nrPDB 27 2.2 4CHU-A nrPDB 27 2.8 3NXC-A nrPDB 26 3.9 2K9Q-A nrPDB 25 5.7 4GFK-A nrPDB 25 6.6 6BN1-B nrPDB 25 6.8 3KJX-A nrPDB 25 8.1 2HCV-A nrPDB 25 8.4 6GY8-A nrPDB 25 8.7 >1BL0-A nrPDB Length = 129 Score = 171 bits (432), Expect = 1e-43, Method: Composition-based stats. Identities = 127/127 (100%), Positives = 127/127 (100%) Query: 1 MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRS 60 MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRS Sbjct: 3 MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRS 62 Query: 61 RKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGESRFLH 120 RKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGESRFLH Sbjct: 63 RKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGESRFLH 122 Query: 121 PLNHYNS 127 PLNHYNS Sbjct: 123 PLNHYNS 129 >4FE4-A nrPDB Length = 392 Score = 139 bits (350), Expect = 3e-34, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 1/111 (0%) Query: 3 RRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRK 62 R TD I + +I ++ + +++V + G S+ +L++ FK+E G ++ I + K Sbjct: 280 RSLTDPAVIQ-AMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEK 338 Query: 63 MTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQ 113 + + L + I +++ G+ S Q FK +D P +YR N + Sbjct: 339 LEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNSE 389 >1D5Y-A nrPDB Length = 292 Score = 135 bits (340), Expect = 5e-33, Method: Composition-based stats. Identities = 51/101 (50%), Positives = 71/101 (70%) Query: 8 AITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIA 67 A I +L W+E +L+ PLSL+ V+ ++GYSKWHLQRMFK TGH++G YIR+R++++ A Sbjct: 2 AGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSA 61 Query: 68 QKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYR 108 L+ + PIL +A +Y F+SQQT TR FK F P YR Sbjct: 62 VALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYR 102 >2K9S-A nrPDB Length = 107 Score = 121 bits (304), Expect = 6e-29, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 45/100 (45%), Gaps = 1/100 (1%) Query: 11 IHSILDWIEDNL-ESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQK 69 + +I D+L +S + V++ S L +F+++ G S+ + +++++ Sbjct: 5 VREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLL 64 Query: 70 LKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRM 109 L + PI + GF+ Q +R FK P ++R Sbjct: 65 LSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFRA 104 >3OOU-A nrPDB Length = 108 Score = 116 bits (291), Expect = 2e-27, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 48/99 (48%) Query: 10 TIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQK 69 I ++L +I ++ +SL+ + + +L ++F+KE G Y+ ++ ++ Sbjct: 6 IIQNVLSYITEHFSEGMSLKTLGNDFHINAVYLGQLFQKEMGEHFTDYLNRYRVNYAKEE 65 Query: 70 LKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYR 108 L ++ + + +A + G+ R FK + P++YR Sbjct: 66 LLQTKDNLTIIAGKSGYTDMAYFYRQFKKHTGETPNRYR 104 >3OIO-A nrPDB Length = 113 Score = 116 bits (290), Expect = 3e-27, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 53/101 (52%) Query: 13 SILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKLKE 72 + +E N+E PLS + ++ G S+ L+R+FK+ G +Y ++ Q L++ Sbjct: 11 EAVSLMEANIEEPLSTDDIAYYVGVSRRQLERLFKQYLGTVPSKYYLELRLNRARQLLQQ 70 Query: 73 SNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQ 113 +++ I+ + GF S + T++N+F++ P + R Q Sbjct: 71 TSKSIVQIGLACGFSSGPHFSSTYRNHFNITPREERAQRAQ 111 >5NLA-A nrPDB Length = 382 Score = 105 bits (263), Expect = 4e-24, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 7/117 (5%) Query: 9 ITIHSILDWIEDNLESP-LSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIA 67 + +I NL S L+ E + G S+ L ++F+ G + YIR R++ + Sbjct: 250 GVMERAHRYIHLNLNSGDLTPETICRELGISRTRLYQLFEPSGG--VLNYIRRRRLLQAY 307 Query: 68 QKLK--ESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGESRFLHPL 122 +L +N PI +AE GF+ TR F + F P + R R P+ Sbjct: 308 AELSDPTNNRPIGEIAEAAGFDLAANFTRAFSHEFGASPREIR--KAAATERLATPV 362 >3LSG-A nrPDB Length = 103 Score = 95.6 bits (236), Expect = 5e-21, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 2/99 (2%) Query: 10 TIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQK 69 I +I++ E +S +L +SE+ S +L MFKK G Y+ ++M + Sbjct: 6 LIQNIIE--ESYTDSQFTLSVLSEKLDLSSGYLSIMFKKNFGIPFQDYLLQKRMEKAKLL 63 Query: 70 LKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYR 108 L + +AE+ GFE FK Y+ + P +YR Sbjct: 64 LLTTELKNYEIAEQVGFEDVNYFITKFKKYYQITPKQYR 102 >3W6V-A nrPDB Length = 147 Score = 65.1 bits (157), Expect = 7e-12, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 44/92 (47%) Query: 13 SILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKLKE 72 ++ W ++L +E ++ R+ S+ R F+ TG + Q++ ++++ + + L+ Sbjct: 42 EVVAWALEHLHEQFDVETLAARAYMSRRTFDRRFRSLTGSAPLQWLITQRVLQAQRLLET 101 Query: 73 SNEPILYLAERYGFESQQTLTRTFKNYFDVPP 104 S+ + +A R GF S L F+ P Sbjct: 102 SDYSVDEVAGRCGFRSPVALRGHFRRQLGSSP 133 >3MKL-A nrPDB Length = 120 Score = 56.7 bits (135), Expect = 3e-09, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 1/100 (1%) Query: 14 ILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKLKES 73 + I +N+ +L +++ S L++ ++E S Q + +M Q + Sbjct: 12 VCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEE-TSYSQLLTECRMQRALQLIVIH 70 Query: 74 NEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQ 113 I +A G+ S F+NY+ + P +Y+ + Q Sbjct: 71 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEYQERSAQ 110 >3MN2-A nrPDB Length = 108 Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Query: 11 IHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKL 70 + + ++IE N P+++EK++ +G S + + F++ G+S + + ++ L Sbjct: 4 VRQVEEYIEANWMRPITIEKLTALTGISSRGIFKAFQRSRGYSPMAFAKRVRLQHAHNLL 63 Query: 71 KE--SNEPILYLAERYGFESQQTLTRTFKNYFDVPPHK 106 + + + A GF + R +++ F P + Sbjct: 64 SDGATPTTVTAAALSCGFSNLGHFARDYRDMFGEKPSE 101 >5CHH-A nrPDB Length = 341 Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 43/105 (40%), Gaps = 1/105 (0%) Query: 12 HSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQKLK 71 I+ +E + S+ V+ + ++ L+R E G + + + + Q L+ Sbjct: 231 QRIVALLEVLQDRYPSIAWVARQLKVTERTLRRRLADE-GTNYREVLDLVRHDRARQLLR 289 Query: 72 ESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGES 116 + I +AER G+ + F+ + + YR + G++ Sbjct: 290 DERLRIEEVAERLGYMDTSSFRHAFRRWTGQCANDYRQARLAGKT 334 >3GBG-A nrPDB Length = 276 Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 39/101 (38%), Gaps = 1/101 (0%) Query: 7 DAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEI 66 D + I ++ ++ + ++ L++ + G + I S +++ Sbjct: 167 DLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYS 225 Query: 67 AQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKY 107 +K I +A + GF S + FK+ +V P +Y Sbjct: 226 ISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEY 266 >2PE4-A nrPDB Length = 424 Score = 30.8 bits (68), Expect = 0.14, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 16/43 (37%), Gaps = 5/43 (11%) Query: 84 YGFESQQTLTRTFKNYFDVPPHKYRMTNMQ-----GESRFLHP 121 YGF NY P R N Q G+SR L+P Sbjct: 183 YGFPDCYNYDFLSPNYTGQCPSGIRAQNDQLGWLWGQSRALYP 225 >2G3B-A nrPDB Length = 208 Score = 29.3 bits (64), Expect = 0.49, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 2/39 (5%) Query: 25 PLSLEKVSERSGYSKWHLQRMFKKETG--HSLGQYIRSR 61 L + V+E +G S L FK G + YI R Sbjct: 23 GLRVNDVAEVAGVSPGLLYYHFKDRIGLLEAALNYINDR 61 >2ZOY-A nrPDB Length = 185 Score = 28.5 bits (62), Expect = 0.67, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 22/44 (50%) Query: 3 RRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMF 46 R + + + + +D+I + LS + ++E +G SK L F Sbjct: 2 RTSKKEMILRTAIDYIGEYSLETLSYDSLAEATGLSKSGLIYHF 45 >2RAS-A nrPDB Length = 212 Score = 28.1 bits (61), Expect = 0.87, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 25/42 (59%), Gaps = 2/42 (4%) Query: 18 IEDNLESPLSLEKVSERSGYSKWHLQRMF--KKETGHSLGQY 57 +E+ + L+L +++ R+G S+ +L R F +++ ++ Y Sbjct: 24 VEERGGAGLTLSELAARAGISQANLSRYFETREDLMEAIADY 65 >1NEX-A nrPDB Length = 169 Score = 28.1 bits (61), Expect = 0.95, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 8/118 (6%) Query: 1 MSRRNTDAITIHSILDWIEDNLESPL---SLEKVSERSGYSKWHLQRMFKKETGHSLGQY 57 M N + + +++W E + +S + + + W R F K L + Sbjct: 52 MPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSW--DREFLKVDQEMLYEI 109 Query: 58 IRSRKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGE 115 I + I L + +AE S + + RTF D P + + E Sbjct: 110 ILAANYLNIKPLLDAGCK---VVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENE 164 >1KU9-A nrPDB Length = 152 Score = 27.8 bits (60), Expect = 1.3, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 19/45 (42%), Gaps = 2/45 (4%) Query: 23 ESPLSLEKVSERSGYSKWHLQRMFKK--ETGHSLGQYIRSRKMTE 65 + PL++ + E SK ++ KK E G +I+ + Sbjct: 39 DKPLTISDIMEELKISKGNVSMSLKKLEELGFVRKVWIKGERKNY 83 >4CIC-A nrPDB Length = 153 Score = 27.4 bits (59), Expect = 1.5, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 23/35 (65%) Query: 11 IHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRM 45 + ++ D + E P+SL+ ++ER G S+ +L+++ Sbjct: 15 VQAMFDLAQHFGEGPVSLKSIAERQGLSEPYLEQL 49 >6GSA-C nrPDB Length = 197 Score = 27.4 bits (59), Expect = 1.5, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 8/118 (6%) Query: 1 MSRRNTDAITIHSILDWIEDNLESPL---SLEKVSERSGYSKWHLQRMFKKETGHSLGQY 57 M N + + +++W E + +S + + + W R F K L + Sbjct: 78 MPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSW--DREFLKVDQEMLYEI 135 Query: 58 IRSRKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRMTNMQGE 115 I + I L + +AE S + + RTF D P + + E Sbjct: 136 ILAANYLNIKPLLDAGCK---VVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAIRRENE 190 >3MWA-A nrPDB Length = 342 Score = 27.0 bits (58), Expect = 2.2, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 17/39 (43%) Query: 66 IAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPP 104 L+++NE I ++ ++ + F N + + P Sbjct: 245 SYLNLEQNNEFIGFVVGANSYDEMNYIRTYFPNCYILSP 283 >4CHU-A nrPDB Length = 163 Score = 26.6 bits (57), Expect = 2.8, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 16/24 (66%) Query: 25 PLSLEKVSERSGYSKWHLQRMFKK 48 P+ L +SER G S +L+++F + Sbjct: 26 PVPLADISERQGISLSYLEQLFSR 49 >3NXC-A nrPDB Length = 212 Score = 26.2 bits (56), Expect = 3.9, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 3/77 (3%) Query: 2 SRRNTDAITIHSILDWIEDNLESP-LSLEKVSERSGYSKWHLQRMF--KKETGHSLGQYI 58 ++RN + S+ +E + S ++ K++ G S+ L R F K SL ++I Sbjct: 21 AKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVSEAALYRHFPSKTRMFDSLIEFI 80 Query: 59 RSRKMTEIAQKLKESNE 75 +T I LK+ + Sbjct: 81 EDSLITRINLILKDEKD 97 >2K9Q-A nrPDB Length = 77 Score = 25.5 bits (54), Expect = 5.7, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 19/37 (51%) Query: 26 LSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRK 62 L+ + V+E G S+ L + + ET + +YI + Sbjct: 16 LTAKSVAEEMGISRQQLCNIEQSETAPVVVKYIAFLR 52 >4GFK-A nrPDB Length = 196 Score = 25.5 bits (54), Expect = 6.6, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 34/74 (45%), Gaps = 3/74 (4%) Query: 10 TIHSILDWIEDNL-ESPLSLEKVSERSGYSKWHLQRMF--KKETGHSLGQYIRSRKMTEI 66 + ++ + +E N S ++ K++++ G S+ L R F K L ++I M+ I Sbjct: 13 ILQALAEMLESNEGASRITTAKLAKQVGVSEAALYRHFPSKTRMFEGLIEFIEESLMSRI 72 Query: 67 AQKLKESNEPILYL 80 + E + + + Sbjct: 73 NRIFDEEKDTLNRI 86 >6BN1-B nrPDB Length = 70 Score = 25.5 bits (54), Expect = 6.8, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 7/60 (11%) Query: 10 TIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQ-------RMFKKETGHSLGQYIRSRK 62 + I W+ E+ S + + + + +S L+ R+FK+E G +G Y R R+ Sbjct: 1 LLEEIPKWLAVYSEADSSKDHLLQFNMFSLPELEGFDSMLVRLFKQELGTIVGFYERYRR 60 >3KJX-A nrPDB Length = 344 Score = 25.1 bits (53), Expect = 8.1, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Query: 18 IEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKMTEIAQK 69 + + + PL+L VSE SG S+ + R+ + + R+R + + Sbjct: 3 LTADTKRPLTLRDVSEASGVSEMTVSRVLRNRG--DVSDATRARVLAAAKEL 52 >2HCV-A nrPDB Length = 438 Score = 25.1 bits (53), Expect = 8.4, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 11/29 (37%) Query: 80 LAERYGFESQQTLTRTFKNYFDVPPHKYR 108 + + F Q TR F+ Y Y+ Sbjct: 180 IGDGSNFPGQSNFTRAFERYLSAMAEIYK 208 >6GY8-A nrPDB Length = 408 Score = 25.1 bits (53), Expect = 8.7, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 8/77 (10%) Query: 13 SILDWIEDNLESPLSLEKVSERSGYS--------KWHLQRMFKKETGHSLGQYIRSRKMT 64 +I +++ +LE P +LE V E GY+ + +FK+ H+L K+ Sbjct: 50 NIKLYVKHSLELPFTLEGVKEYIGYNDIDIDGLKPAKMATLFKEIHDHALSWSGVESKVQ 109 Query: 65 EIAQKLKESNEPILYLA 81 + + L+ + + I Sbjct: 110 QQSIDLENAGKQITLTG 126 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.130 0.320 Lambda K H 0.267 0.0399 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,272,484 Number of Sequences: 36641 Number of extensions: 130480 Number of successful extensions: 472 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 43 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 424 Number of HSP's gapped (non-prelim): 62 length of query: 127 length of database: 10,336,785 effective HSP length: 86 effective length of query: 41 effective length of database: 7,185,659 effective search space: 294612019 effective search space used: 294612019 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 53 (25.1 bits)