BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P0ABH9 (758 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1R6B-X nrPDB 1551 0.0 3J3U-A nrPDB 508 e-144 6EM8-A nrPDB 458 e-129 3PXI-A nrPDB 429 e-120 5OFO-C nrPDB 336 2e-92 6ED3-A nrPDB 291 6e-79 1QVR-A nrPDB 283 2e-76 4LJ8-A nrPDB 278 8e-75 4HSE-A nrPDB 277 1e-74 4CIU-A nrPDB 273 3e-73 6D00-1 nrPDB 269 4e-72 3PXG-A nrPDB 257 1e-68 5D4W-A nrPDB 256 2e-68 5VY8-A nrPDB 253 3e-67 6E11-1 nrPDB 224 1e-58 2P65-A nrPDB 217 2e-56 6EMW-B nrPDB 214 1e-55 1JBK-A nrPDB 209 3e-54 6AMN-A nrPDB 206 2e-53 6EMW-E nrPDB 204 9e-53 6MAT-A nrPDB 54 2e-07 5W0T-A nrPDB 46 5e-05 4LGM-A nrPDB 46 6e-05 6AP1-A nrPDB 45 9e-05 3M6A-A nrPDB 44 2e-04 5XMK-A nrPDB 44 3e-04 3EIH-A nrPDB 44 3e-04 4I5O-A nrPDB 44 3e-04 6B5D-A nrPDB 43 4e-04 5ZQM-A nrPDB 43 5e-04 1XWI-A nrPDB 43 5e-04 5WC0-A nrPDB 43 6e-04 2ZAO-A nrPDB 42 0.001 6B5C-A nrPDB 41 0.002 5Z6Q-A nrPDB 40 0.003 1E94-E nrPDB 40 0.004 5VC7-A nrPDB 40 0.005 6NYV-B nrPDB 39 0.006 5G4G-A nrPDB 39 0.006 1OFI-A nrPDB 39 0.007 1UM8-A nrPDB 39 0.007 4L16-A nrPDB 38 0.020 1IM2-A nrPDB 37 0.029 2W0A-A nrPDB 37 0.035 3D8B-A nrPDB 37 0.038 3PVS-A nrPDB 37 0.042 6CHS-H nrPDB 37 0.042 4LCB-A nrPDB 36 0.061 3HU1-A nrPDB 36 0.067 5EQT-A nrPDB 36 0.078 2R65-A nrPDB 35 0.093 5VFP-B nrPDB 35 0.097 6MSK-B nrPDB 35 0.099 4YPN-A nrPDB 35 0.11 3H4M-A nrPDB 35 0.11 2CHV-A nrPDB 35 0.14 5VHO-B nrPDB 35 0.14 5VHF-B nrPDB 35 0.15 2CHG-A nrPDB 35 0.15 5M32-h nrPDB 35 0.15 5GJQ-J nrPDB 34 0.22 5VHP-C nrPDB 34 0.23 5UBV-A nrPDB 34 0.23 3T1U-A nrPDB 34 0.24 5TSG-B nrPDB 34 0.25 6MCK-A nrPDB 33 0.35 5C18-A nrPDB 33 0.40 6MSD-E nrPDB 33 0.40 4YPL-A nrPDB 33 0.41 6EPC-H nrPDB 33 0.44 1NJG-A nrPDB 33 0.44 3H1T-A nrPDB 33 0.50 3GLF-B nrPDB 33 0.50 5VHP-E nrPDB 33 0.60 5VHO-A nrPDB 33 0.60 5VFU-A nrPDB 33 0.66 6HE9-H nrPDB 32 0.73 1SXJ-D nrPDB 32 0.75 3WHK-A nrPDB 32 0.78 6EF3-H nrPDB 32 0.93 5IY9-V nrPDB 32 0.96 1LV7-A nrPDB 32 1.0 6EF0-H nrPDB 32 1.2 3JCO-J nrPDB 32 1.2 5ZFR-A nrPDB 32 1.2 5EXS-A nrPDB 32 1.3 6EF2-J nrPDB 32 1.4 6HE4-H nrPDB 32 1.5 5EXX-A nrPDB 31 1.6 3JCP-I nrPDB 31 1.7 2DHR-A nrPDB 31 1.7 2ZXU-A nrPDB 31 2.0 1J3B-A nrPDB 31 2.0 4WW4-B nrPDB 31 2.1 2Z4R-A nrPDB 31 2.2 6EF1-I nrPDB 31 2.3 6FVU-I nrPDB 31 2.5 2QZ4-A nrPDB 30 2.9 6MFV-A nrPDB 30 3.1 6F8L-G nrPDB 30 3.3 5C3C-A nrPDB 30 3.6 4F0L-A nrPDB 30 4.2 2AWD-A nrPDB 30 4.5 2CE7-A nrPDB 30 4.6 1IQP-A nrPDB 30 4.7 1IN6-A nrPDB 30 5.0 6ABJ-A nrPDB 30 5.1 2YV5-A nrPDB 30 5.2 2V1U-A nrPDB 29 6.0 3EXA-A nrPDB 29 8.7 2XSZ-D nrPDB 29 9.2 3GL5-A nrPDB 29 9.7 >1R6B-X nrPDB Length = 758 Score = 1551 bits (4017), Expect = 0.0, Method: Compositional matrix adjust. Identities = 757/758 (99%), Positives = 758/758 (100%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA Sbjct: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA Sbjct: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEER+ENFTTNLNQLA Sbjct: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERLENFTTNLNQLA 180 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM Sbjct: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ Sbjct: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING Sbjct: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT Sbjct: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG Sbjct: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY 540 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY Sbjct: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY 540 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV Sbjct: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ Sbjct: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL Sbjct: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 Query: 721 LFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH 758 LFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH Sbjct: 721 LFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH 758 >3J3U-A nrPDB Length = 810 Score = 508 bits (1308), Expect = e-144, Method: Compositional matrix adjust. Identities = 307/795 (38%), Positives = 467/795 (58%), Gaps = 93/795 (11%) Query: 22 HEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQ 79 H + EH+LL L+ A +AL+A + +++E+E+ I + E + Sbjct: 26 HNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGR------GQEMSQTIH 79 Query: 80 PTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVS----RLDVV 135 T ++V++ ++ + G + V ++L+ + E E AA +L VS R V+ Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139 Query: 136 NFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKEL 195 + T SS G+ N+ +++ +L +A+ +DP+IGR KE+ Sbjct: 140 QLLGSN-----ETGSSAAGTNSNANTPT-----LDSLARDLTAIAKEDSLDPVIGRSKEI 189 Query: 196 ERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLA 255 +R I+VL RR KNNP+L+GE GVGKTAIAEGLA +I+ +VPE++ D + +LD+G+++A Sbjct: 190 QRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVA 249 Query: 256 GTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGK 315 GTKYRG+FE R K ++ ++ Q N ILFID +HT+IGAG A G +DA+N++KP L+ G+ Sbjct: 250 GTKYRGEFEDRLKKVMDEIRQAGNIILFIDALHTLIGAGGAEGA-IDASNILKPSLARGE 308 Query: 316 IRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTA 375 ++ IG+TT E+ EKD AL RRFQ I + +PS++E++QI+ GL+ +YEAHH V T Sbjct: 309 LQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITD 368 Query: 376 KAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS---------------KRKKT 420 A+ AAV+L+ +YI+DR LPDKAID+IDEAG++ RL + +++K Sbjct: 369 DAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKD 428 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLG------------DRLKMLV-------- 460 V E A R E+ + + DT K+ D + M+V Sbjct: 429 AAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVVSSWTGVPV 488 Query: 461 ----------------------FGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTG 498 GQD+A+ A+ +A++ ARAGL +P+GSF+F GPTG Sbjct: 489 SKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTG 548 Query: 499 VGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIK 555 VGKTE+ L++++ G E ++R DMSEYME+H+ SRL+G+PPGYVG+D+GG LT+ V + Sbjct: 549 VGKTELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRR 608 Query: 556 HPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER- 614 P++V+LLD IEKAHPDVFNILLQV+++G LTD+ GR DFRN +L+MT+N G E +R Sbjct: 609 KPYSVVLLDAIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKRN 668 Query: 615 KSIGL-------IHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIV 667 K +G H+D M E+K+ F PEF NR+D II F L + ++V Sbjct: 669 KYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLTEIVSLMSD 728 Query: 668 ELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVD 727 +L +L ++ +S+E++ A+ +AE+G D GARP+ R IQ +++ L+ ELL G++ Sbjct: 729 QLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHK 788 Query: 728 GGQVTVALDKEKNEL 742 G + LD E E Sbjct: 789 GQHIV--LDVEDGEF 801 >6EM8-A nrPDB Length = 818 Score = 458 bits (1178), Expect = e-129, Method: Compositional matrix adjust. Identities = 280/804 (34%), Positives = 453/804 (56%), Gaps = 107/804 (13%) Query: 22 HEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQ 79 H + EHLLL L+ P A + LE+ ++ + +E+E I +D Sbjct: 26 HSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHG----------QDHV 75 Query: 80 PTLSF----QRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEV----SR 131 TL + ++V++ ++ + N V ++L+ + E E AA + ++ +R Sbjct: 76 GTLHYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKAR 135 Query: 132 LDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGR 191 VV + + ++ Q+S + P +++ +L +A+ G +DP+IGR Sbjct: 136 AQVVKALGNPEMSNKNAQASKSNNTPT----------LDSLARDLTVIAKDGTLDPVIGR 185 Query: 192 EKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIG 251 +KE+ R I+VL RR KNNP+L+GE GVGKTAIAEGLA IV +VPE + D + SLD+G Sbjct: 186 DKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMG 245 Query: 252 SLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL 311 +++AGTKYRG+FE+R K ++++++Q N ILFIDE+HT++GAG A G +DA+N++KP L Sbjct: 246 TVVAGTKYRGEFEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGA-IDASNILKPAL 304 Query: 312 SSGKIRVIGSTTYQEFSNIFEKDRALARRFQ---------------------------KI 344 + G+++ IG+TT E+ EKD AL RRFQ +I Sbjct: 305 ARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRI 364 Query: 345 DITEPSIEETVQIIN-----------GLKPKYEAHHDVRYTA-------KAVRAAVELAV 386 +I++ +IE V++ N + EA VR + K + +E Sbjct: 365 NISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQEIE--- 421 Query: 387 KYINDRHLPDKAIDVIDEAGARARLMPVSKR---------------KKTVNVADIESVVA 431 K N++ A + + A R + + K+ +++ DI V+A Sbjct: 422 KVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTSLSEEDIAEVIA 481 Query: 432 RIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSF 491 IP +++++ + L +L D L V GQ A+ ++++A++ ARAGL +P+GSF Sbjct: 482 GWTGIPLTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSF 541 Query: 492 LFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL 548 +F GPTGVGKTE+ L++++ + ++R DMSE+ME+H VSRL+GAPPGYVG D GG Sbjct: 542 IFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQ 601 Query: 549 LTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG 608 LT+ V + P++V+L DEIEKAHPDVFNILLQV+D+G LTD GR DFRN +++MT+N G Sbjct: 602 LTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVG 661 Query: 609 VRETERK--------SIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 +E + + S G ++ ++E+K F PEF NR+D+II F L+ + + + Sbjct: 662 AQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELKE 721 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 +V + +L +L ++ +++ V+ +A++ +AE+GYD GARP+ R IQ ++ L+ + Sbjct: 722 IVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELI 781 Query: 721 LFGSLVDGGQVTVALDKEKNELTY 744 L G+ ++G +VTV D + E Y Sbjct: 782 LDGNQIEGKKVTV--DHDGKEFKY 803 >3PXI-A nrPDB Length = 758 Score = 429 bits (1104), Expect = e-120, Method: Compositional matrix adjust. Identities = 282/787 (35%), Positives = 432/787 (54%), Gaps = 129/787 (16%) Query: 22 HEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQ 79 H + EH+LL L+ A +AL+A + +++E+E+ I + E + Sbjct: 26 HNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGR------GQEMSQTIH 79 Query: 80 PTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVS----RLDVV 135 T ++V++ ++ + G + V ++L+ + E E AA +L VS R V+ Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139 Query: 136 NFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKEL 195 + T SS G+ N+ +++ +L +A+ +DP+IGR KE+ Sbjct: 140 QLLGSN-----ETGSSAAGTNSNANTPT-----LDSLARDLTAIAKEDSLDPVIGRSKEI 189 Query: 196 ERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLA 255 +R I+VL RR KNNP+L+GE GVGKTAIAEGLA +I+ +VPE++ D + +LD+G Sbjct: 190 QRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMG---- 245 Query: 256 GTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGK 315 TKYRG+FE R K ++ ++ Q N ILFID +DA+N++KP L+ G+ Sbjct: 246 -TKYRGEFEDRLKKVMDEIRQAGNIILFID-------------AAIDASNILKPSLARGE 291 Query: 316 IRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTA 375 ++ IG+TT E+ EKD AL RRFQ I + +PS++E++QI+ GL+ +YEAHH V T Sbjct: 292 LQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITD 351 Query: 376 KAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS---------------KRKKT 420 A+ AAV+L+ +YI+DR LPDKAID+IDEAG++ RL + +++K Sbjct: 352 DAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKD 411 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLG------------DRLKMLV-------- 460 V E A R E+ + + DT K+ D + M+V Sbjct: 412 AAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVVSSWTGVPV 471 Query: 461 ----------------------FGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTG 498 GQD+A+ A+ +A++ ARAGL +P+GSF+F GPTG Sbjct: 472 SKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTG 531 Query: 499 VGKTEVTVQLSKAL-GIE--LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIK 555 VGKTE+ L++++ G E ++R DMSEYME+H+ S GG LT+ V + Sbjct: 532 VGKTELARALAESIFGDEESMIRIDMSEYMEKHSTS--------------GGQLTEKVRR 577 Query: 556 HPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERK 615 P++V+LLD IEKAHPDVFNILLQV+++G LTD+ GR DFRN +L+MT+N G E ++ Sbjct: 578 KPYSVVLLDAIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASEKDK- 636 Query: 616 SIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQ 675 M E+K+ F PEF NR+D II F L + ++V +L +L + Sbjct: 637 ------------VMGELKRAFRPEFINRIDEIIVFHSLEKKHLTEIVSLMSDQLTKRLKE 684 Query: 676 KGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVAL 735 + +S+E++ A+ +AE+G D GARP+ R IQ +++ L+ ELL G++ G + L Sbjct: 685 QDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIV--L 742 Query: 736 DKEKNEL 742 D E E Sbjct: 743 DVEDGEF 749 >5OFO-C nrPDB Length = 871 Score = 336 bits (862), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 163/325 (50%), Positives = 229/325 (70%), Gaps = 3/325 (0%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 + V A+I V+AR IP + +S+R+ L + L V GQ++A++A++ AI+ + Sbjct: 532 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 591 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLI 534 RAGL ++P+GSFLF GPTGVGKTE+ L+ + ++R DMSE+ME+H+VSRL+ Sbjct: 592 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 651 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVG+++GG LT+AV + P++V+LLD +EKAHPDVFNILLQV+D+G LTD GR Sbjct: 652 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDAVEKAHPDVFNILLQVLDDGRLTDGQGRTV 711 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 DFRN V++MT+N GVRETERKSIGLIHQDNSTDAMEEIKKIF PEF NR+D ++ F L Sbjct: 712 DFRNTVVIMTSNLGVRETERKSIGLIHQDNSTDAMEEIKKIFRPEFINRIDEVVVFHPLG 771 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 I + + L +L+++G + +S EA L+E GYD GARP+ R IQ ++ Sbjct: 772 EQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIEN 831 Query: 715 PLANELLFGSLVDGGQVTVALDKEK 739 PLA ++L G LV G + + +++++ Sbjct: 832 PLAQQILSGELVPGKVIRLEVNEDR 856 Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 167/419 (39%), Positives = 247/419 (58%), Gaps = 20/419 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNP--SAREALEACSVDLVALRQELE 59 L + +L+L A + A H ++F+ HL+ ALL+ S L + ++ LR + Sbjct: 10 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTD-- 67 Query: 60 AFIEQTTPVLPASEEER-DTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQES 118 I Q LP E D QP+ RVL Q G N ++ ++A E Sbjct: 68 --INQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRG 124 Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 A +L+ + ++ I E + + + +E+Q + ++ +T +L + Sbjct: 125 TLADILKAAGATTANITQAI-------EQMRGGESVNDQGAEDQ---RQALKKYTIDLTE 174 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 A G +DP+IGR++E+ R IQVL RR KNNP+L+GE GVGKTAI EGLA RI+ G+VPE Sbjct: 175 RAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPE 234 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEIHTIIGAGAAS 297 + + +LD+G+L+AG KYRG+FE+R K +L L +Q+ N ILFID +HT++GAG A Sbjct: 235 GLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDALHTMVGAGKAD 294 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +DA N++KP L+ G++ +G+TT E+ EKD AL RRFQK+ + EPS+E+T+ I Sbjct: 295 GA-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAI 353 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK 416 + GLK +YE HH V+ T A+ AA L+ +YI DR LPDKAID+IDEA + R+ SK Sbjct: 354 LRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSK 412 >6ED3-A nrPDB Length = 848 Score = 291 bits (746), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 177/426 (41%), Positives = 260/426 (61%), Gaps = 33/426 (7%) Query: 29 HLLLALLSNPSAREA--LEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQR 86 HLL+ALL+ A LEA V+ +R E + +++ AS TQP LS + Sbjct: 33 HLLMALLTQNDGIAAPLLEAVGVEPATVRAETQRLLDRLPQATGAS-----TQPQLSRES 87 Query: 87 VLQRAVFHVQSSGRNE--VTGANVLVAIFSEQESQAAYLLRKHEVS----RLDVVNFISH 140 + ++ ++ V+ +V+V + + +S A LL H S R V + Sbjct: 88 LAAITTAQQLATELDDEYVSTEHVMVGLAT-GDSDVAKLLTGHGASPQALREAFVK-VRG 145 Query: 141 GTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQ 200 R P +P + QA ++ ++T+L AR G +DP+IGR+ E+ R +Q Sbjct: 146 SARVTSP--------EPEATYQA-----LQKYSTDLTARAREGKLDPVIGRDNEIRRVVQ 192 Query: 201 VLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYR 260 VL RR KNNP+L+GE GVGKTAI EGLA RIV GDVPE + D TI +LD+GS++AG+KYR Sbjct: 193 VLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVALDLGSMVAGSKYR 252 Query: 261 GDFEKRFKALLKQLEQDTNSIL-FIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVI 319 G+FE+R KA+L ++ I+ FIDE+HTI+GAGA G +DA N+IKP+L+ G++R++ Sbjct: 253 GEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIKPMLARGELRLV 312 Query: 320 GSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVR 379 G+TT E+ EKD AL RRFQ++ + EPS+E+T+ I+ GLK +YE HH VR T A+ Sbjct: 313 GATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVHHGVRITDSALV 372 Query: 380 AAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEK 439 AA L+ +YI R LPDKAID++DEA +R R M + R V + ++E +V R+ I E Sbjct: 373 AAATLSDRYITARFLPDKAIDLVDEAASRLR-MEIDSRP--VEIDEVERLVRRL-EIEEM 428 Query: 440 SVSQSD 445 ++S+ + Sbjct: 429 ALSKEE 434 Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 145/354 (40%), Positives = 220/354 (62%), Gaps = 20/354 (5%) Query: 396 DKAIDV-IDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGD 454 +K +D + +A AR ++M K+ V DI VV+ IP + + + L + D Sbjct: 511 EKKLDAALPQAQAREQVM----LKEEVGPDDIADVVSAWTGIPAGRLLEGETAKLLRMED 566 Query: 455 RLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI 514 L V GQ A+ A+++A++ +RAG+ ++P G+F+F GPTGVGKTE+ L+ L Sbjct: 567 ELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPTGAFMFLGPTGVGKTELAKALADFLFD 626 Query: 515 E---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHP 571 + ++R DMSEY E+HTV+RLIGAPPGYVG++ GG LT+AV + P+ V+L DEIEKAHP Sbjct: 627 DERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEAGGQLTEAVRRRPYTVVLFDEIEKAHP 686 Query: 572 DVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEE 631 DVF++LLQV+D G LTD +GR DFRN +L++T+N G S G Q + Sbjct: 687 DVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTSNLG-------SGGSAEQ-----VLAA 734 Query: 632 IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLA 691 ++ F PEF NRLD+++ F+ L+ + + ++VD + +L +L Q+ + L+VS A+ WLA Sbjct: 735 VRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQLAQLGKRLAQRRLQLQVSLPAKRWLA 794 Query: 692 EKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYG 745 ++G+D GARP+ R++Q + LA LL G + DG V V + + + L G Sbjct: 795 QRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNVSPDADSLILG 848 >1QVR-A nrPDB Length = 854 Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 150/319 (47%), Positives = 220/319 (68%), Gaps = 8/319 (2%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V DI +V+R IP + + +R+ L L + L V GQD+AI A+ +AI+ ARAG Sbjct: 521 VTEEDIAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAG 580 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAP 537 L ++P+GSFLF GPTGVGKTE+ L+ L ++R DM+EYME+H VSRLIGAP Sbjct: 581 LKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAP 640 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+++GG LT+AV + P++V+L DEIEKAHPDVFNILLQ++D+G LTD++GR DFR Sbjct: 641 PGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFR 700 Query: 598 NVVLVMTTNAG---VRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 N V+++T+N G + E +K G ++ + + +++ F PEF NRLD I+ F L+ Sbjct: 701 NTVIILTSNLGSPLILEGLQK--GWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLT 758 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 + I Q+V+ + L+ +L +K +SLE+++ A+++LAE+GYD GARP+ RVIQ L+ Sbjct: 759 KEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELET 818 Query: 715 PLANELLFGSLVDGGQVTV 733 PLA ++L G + +G +V V Sbjct: 819 PLAQKILAGEVKEGDRVQV 837 Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 136/244 (55%), Positives = 182/244 (74%), Gaps = 3/244 (1%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 +E + +L +LA G +DP+IGR++E+ R IQ+L RR KNNP+L+GE GVGKTAI EGLA Sbjct: 153 LEQYGIDLTRLAAEGKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLA 212 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS-ILFIDEI 287 RIV+GDVPE + I SL +GSLLAG KYRG+FE+R KA+++++ Q ILFIDE+ Sbjct: 213 QRIVKGDVPEGLKGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDEL 272 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HT++GAG A G VDA N++KP L+ G++R+IG+TT E+ I EKD AL RRFQ + + Sbjct: 273 HTVVGAGKAEGA-VDAGNMLKPALARGELRLIGATTLDEYREI-EKDPALERRFQPVYVD 330 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EP++EET+ I+ GLK KYE HH VR + A+ AA L+ +YI +R LPDKAID+IDEA A Sbjct: 331 EPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAA 390 Query: 408 RARL 411 R R+ Sbjct: 391 RLRM 394 >4LJ8-A nrPDB Length = 339 Score = 278 bits (710), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 148/315 (46%), Positives = 219/315 (69%), Gaps = 8/315 (2%) Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 DI +V+R IP + + +R+ L L + L V GQD+AI A+ +AI+ ARAGL Sbjct: 10 DIAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDP 69 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYV 541 ++P+GSFLF GPTGVGKTE+ L+ L +++ DM+EYME+H VSRLIGAPPGYV Sbjct: 70 NRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIQIDMTEYMEKHAVSRLIGAPPGYV 129 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G+++GG LT+AV + P++V+L DEIEKAHPDVFNILLQ++D+G LTD++GR DFRN V+ Sbjct: 130 GYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVI 189 Query: 602 VMTTNAG---VRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVI 658 ++T+N G + E +K G ++ + + +++ F PEF NRLD I+ F L+ + I Sbjct: 190 ILTSNLGSPLILEGLQK--GWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQI 247 Query: 659 HQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLAN 718 Q+V+ + L+ +L +K +SLE+++ A+++LAE+GYD GARP+ RVIQ L+ PLA Sbjct: 248 RQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQ 307 Query: 719 ELLFGSLVDGGQVTV 733 ++L G + +G +V V Sbjct: 308 KILAGEVKEGDRVQV 322 >4HSE-A nrPDB Length = 397 Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 139/259 (53%), Positives = 186/259 (71%), Gaps = 3/259 (1%) Query: 154 GSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLV 213 GS +E +E + +L +LA G +DP+IGR++E+ R IQ+L RR KNNP+L+ Sbjct: 1 GSHMQTEHAESTYNALEQYGIDLTRLAAEGKLDPVIGRDEEIRRVIQILLRRTKNNPVLI 60 Query: 214 GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ 273 GE GVGKTAI EGLA RIV+GDVPE + I SL +GSLLAG KYRG+FE+R KA++++ Sbjct: 61 GEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQE 120 Query: 274 LEQDTNS-ILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFE 332 + Q ILFIDE+HT++GAG A G VDA N++KP L+ G++R+IG+TT E+ I E Sbjct: 121 VVQSQGEVILFIDELHTVVGAGKAEGA-VDAGNMLKPALARGELRLIGATTLDEYREI-E 178 Query: 333 KDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDR 392 KD AL RRFQ + + EP++EET+ I+ GLK KYE HH VR + A+ AA L+ +YI +R Sbjct: 179 KDPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITER 238 Query: 393 HLPDKAIDVIDEAGARARL 411 LPDKAID+IDEA AR R+ Sbjct: 239 RLPDKAIDLIDEAAARLRM 257 >4CIU-A nrPDB Length = 727 Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 137/325 (42%), Positives = 208/325 (64%), Gaps = 3/325 (0%) Query: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477 + V A+I V+AR IP + +S+R+ L + L V GQ++A++A++ AI+ + Sbjct: 386 RNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS 445 Query: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLI 534 RAGL ++P+GSFLF GPTGVGKTE+ L+ + ++R DMSE+ME+H+VSRL+ Sbjct: 446 RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLV 505 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKA 594 GAPPGYVG+++GG LT+AV + P++V+LLD +EKAHPDVFNILLQV+D+G LTD GR Sbjct: 506 GAPPGYVGYEEGGYLTEAVRRRPYSVILLDAVEKAHPDVFNILLQVLDDGRLTDGQGRTV 565 Query: 595 DFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLS 654 DFRN V++MT+N G + + L + + + F PEF NR+D ++ F L Sbjct: 566 DFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLG 625 Query: 655 TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 I + + L +L+++G + +S EA L+E GYD GARP+ R IQ ++ Sbjct: 626 EQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIEN 685 Query: 715 PLANELLFGSLVDGGQVTVALDKEK 739 PLA ++L G LV G + + +++++ Sbjct: 686 PLAQQILSGELVPGKVIRLEVNEDR 710 Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 129/249 (51%), Positives = 180/249 (72%), Gaps = 2/249 (0%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ +T +L + A G +DP+IGR++E+ R IQVL RR KNNP+L+GE GVGKTAI EGLA Sbjct: 19 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 78 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEI 287 RI+ G+VPE + + +LD+G+L+AG KYRG+FE+R K +L L +Q+ N ILFID + Sbjct: 79 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDAL 138 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HT++GAG A G +DA N++KP L+ G++ +G+TT E+ EKD AL RRFQK+ + Sbjct: 139 HTMVGAGKADGA-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 197 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 EPS+E+T+ I+ GLK +YE HH V+ T A+ AA L+ +YI DR LPDKAID+IDEA + Sbjct: 198 EPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAAS 257 Query: 408 RARLMPVSK 416 R+ SK Sbjct: 258 SIRMQIDSK 266 >6D00-1 nrPDB Length = 883 Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 186/487 (38%), Positives = 276/487 (56%), Gaps = 57/487 (11%) Query: 9 SLNMAFARAREHRHEFMTVEHLLLALLS--NPSAREALEACSVDLVALRQELEA-FIEQT 65 +LN A A E+ H + H+ + +L N R LE D+V++ + + + Q Sbjct: 14 TLNAAAKYAAENSHVQLHPSHVAVVMLDEENSLFRSILEKAGGDVVSIERGFKKIMVRQP 73 Query: 66 TPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLR 125 + P +E P L+ ++L A H++ R+ + L+ ++ S A +L+ Sbjct: 74 SQDPPPTE--MGHSPELA--KLLHYAHEHMKKQ-RDLYIAQDHLILALADLPSMAQ-VLK 127 Query: 126 KHEVSRLDVVNFISH--GTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVG 183 + V++ + N ++H G R+ E S E+A E + + +L +LA G Sbjct: 128 EGGVTKKSLENAVTHVRGNRRVES----------KSAEEA--YEALSKYCIDLTELAASG 175 Query: 184 GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC 243 +DP+IGR++ + R I+VL RR KNNP LVGE GVGKTAIAEGLA RIV+GD+P + Sbjct: 176 KLDPVIGRDEIISRVIRVLSRRTKNNPCLVGEPGVGKTAIAEGLANRIVKGDIPSSLQK- 234 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDA 303 +YSLDIGSLLAG KYRG+FE+R KA+LK+L ++ +I+FIDEIHT++GAG + G +DA Sbjct: 235 KVYSLDIGSLLAGAKYRGEFEERLKAVLKEL-KEAQAIVFIDEIHTVLGAGKSEGA-IDA 292 Query: 304 ANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKP 363 ANL+KP+L+ G++R IG+TT E+ EKD A RRFQ + + EPS+ +T+ I+ GLK Sbjct: 293 ANLLKPMLARGELRCIGATTLTEYRQYVEKDPAFERRFQLVMVEEPSVTDTISILRGLKE 352 Query: 364 KYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM----------- 412 +YE HH VR A+ AA +LA +YI R +PDKAID+IDEA A R+ Sbjct: 353 RYETHHGVRIADAAIVAAAQLAARYITQRFMPDKAIDLIDEACANTRVQLDSQPEAIDKL 412 Query: 413 ------------PVSKRKKTVNVADIESVVARIARI-----PEKSVSQSDR---DTLKNL 452 + K K + ++ V A +ARI P K +S++ D ++NL Sbjct: 413 ERRHLQLEVEATALEKEKDAASKQRLQEVRAEMARIQEELRPLKMKYESEKGRLDEIRNL 472 Query: 453 GDRLKML 459 RL L Sbjct: 473 SQRLDEL 479 Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 133/316 (42%), Positives = 208/316 (65%), Gaps = 3/316 (0%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I VV+R IP ++ +S+++ L ++ + +K V GQD+AI+A+ +AI+++R GL + + Sbjct: 538 IMEVVSRWTGIPVSNLQRSEKEKLLHMEEYMKQHVVGQDEAIKAICDAIRLSRTGLQNRN 597 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P+ SFLF GPTG GKT +L+ L + ++R DMSEYME+H VSRL+GAPPGY+G Sbjct: 598 RPLASFLFLGPTGCGKTLCVKELAAFLFNDPGAIVRIDMSEYMEKHAVSRLVGAPPGYIG 657 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 D+GG LT+AV + P+ V+L DE+EKAH DV N+LLQ++D+G TD+ GR+ DF+N ++V Sbjct: 658 HDEGGQLTEAVRRRPYTVVLFDEMEKAHKDVSNLLLQILDDGHCTDSKGRRVDFKNTIIV 717 Query: 603 MTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVV 662 MT+N G E + Q + ++ F EF NR+D +I F+ L+ I ++V Sbjct: 718 MTSNLGADLFELDEGDKVSQATKNAVLATARRHFANEFINRIDELIVFNRLTPSNIRKIV 777 Query: 663 DKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLF 722 D + E+Q +LD+K ++L+V +A++ LA++G+D GARP+ R+IQ L L+ LL Sbjct: 778 DVRLKEVQERLDEKQITLDVDDKAKDLLAQQGFDPVYGARPLNRLIQHALLTQLSRLLLD 837 Query: 723 GSLVDGGQVTVALDKE 738 G + G V +D+E Sbjct: 838 GGVRPGEIAKVTVDQE 853 >3PXG-A nrPDB Length = 468 Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 150/396 (37%), Positives = 233/396 (58%), Gaps = 40/396 (10%) Query: 22 HEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQ 79 H + EH+LL L+ A +AL+A + +++E+E+ I + E + Sbjct: 26 HNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGR------GQEMSQTIH 79 Query: 80 PTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVS----RLDVV 135 T ++V++ ++ + G + V ++L+ + E E AA +L VS R V+ Sbjct: 80 YTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVL 139 Query: 136 NFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKEL 195 + T SS G+ N+ +++ +L +A+ +DP+IGR KE+ Sbjct: 140 QLLGSN-----ETGSSAAGTNSNANTPT-----LDSLARDLTAIAKEDSLDPVIGRSKEI 189 Query: 196 ERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLA 255 +R I+VL RR KNNP+L+GE GVGKTAIAEGLA +I+ +VPE++ D + +LD+G Sbjct: 190 QRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMG---- 245 Query: 256 GTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGK 315 TKYRG+FE R K ++ ++ Q N ILFID +DA+N++KP L+ G+ Sbjct: 246 -TKYRGEFEDRLKKVMDEIRQAGNIILFID-------------AAIDASNILKPSLARGE 291 Query: 316 IRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTA 375 ++ IG+TT E+ EKD AL RRFQ I + +PS++E++QI+ GL+ +YEAHH V T Sbjct: 292 LQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITD 351 Query: 376 KAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 A+ AAV+L+ +YI+DR LPDKAID+IDEAG++ RL Sbjct: 352 DAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRL 387 >5D4W-A nrPDB Length = 926 Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 122/238 (51%), Positives = 171/238 (71%), Gaps = 1/238 (0%) Query: 167 ERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEG 226 E + F ++ +AR G IDP+IGRE+E+ R I++L RR KNNP+L+GE GVGKT I EG Sbjct: 176 ENLSKFCIDMTAMAREGKIDPVIGREEEIRRVIRILSRRTKNNPVLIGEPGVGKTTIVEG 235 Query: 227 LAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI-LFID 285 LA RIV DVP+ +A C + SLD+G+L+AG+KYRG+FE+R K +LK++++ +I LF+D Sbjct: 236 LAQRIVNADVPDNLAACKLLSLDVGALVAGSKYRGEFEERMKGVLKEIQESKETIILFVD 295 Query: 286 EIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKID 345 IH ++GAG++ G +DAANL+KP+L+ G++ IG+TT E+ EKD A RRFQ++ Sbjct: 296 AIHLLMGAGSSGEGGMDAANLLKPMLARGQLHCIGATTLAEYRKYIEKDAAFERRFQQVL 355 Query: 346 ITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID 403 + EPSI ET+ I+ GLK KYE HH V A+ AA LA +Y+ R LPD A+D+ID Sbjct: 356 VKEPSISETISILRGLKEKYEVHHGVNIADAAIVAAANLAARYLTSRRLPDSAVDLID 413 Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 122/314 (38%), Positives = 196/314 (62%), Gaps = 15/314 (4%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 I +VAR IP + S+++ L ++ L +V GQ +A+++++ AI++ R+GL + + Sbjct: 566 INEIVARWTGIPVTRLKTSEKEKLLHMEQALSKIVVGQKEAVQSVSNAIRLQRSGLSNPN 625 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKAL---GIELLRFDMSEYMERHTVSRLIGAPPGYVG 542 +P SFLF GP+G GKT +T L++ L ++RFDMSEY ERH++SR+IGAPPGYVG Sbjct: 626 QP-PSFLFCGPSGTGKTLLTKALAEFLFDDPKSMIRFDMSEYQERHSLSRMIGAPPGYVG 684 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 D GG LT+A+ + P ++LL D +EKA +V +LLQ+MD+G +TD GR D +N ++V Sbjct: 685 HDAGGQLTEALRRRPFSILLFDAVEKAAKEVLTVLLQLMDDGRITDGQGRVVDAKNCIVV 744 Query: 603 MTTNAGVRETERKSIGLIHQDNSTD------AMEEIKKIFTPEFRNRLDNIIWFDHLSTD 656 MT+N G R + G +D D M ++ F PEF NR+ +++ F+ L+ Sbjct: 745 MTSNLGAEYLSRANNG---KDGKIDPTTRELVMNTLRNYFLPEFLNRISSVVIFNRLTRR 801 Query: 657 VIHQVVDKFIVELQVQL--DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 I ++VD I E+Q +L + + V ++VS+EA++ L +GY GARP+ R+++ + Sbjct: 802 EIRKIVDLRIAEIQKRLTDNDRNVIIKVSEEAKDKLGAQGYSPVYGARPLQRLLEKEVLN 861 Query: 715 PLANELLFGSLVDG 728 LA +L G + +G Sbjct: 862 RLAILILRGQIREG 875 >5VY8-A nrPDB Length = 908 Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 147/405 (36%), Positives = 233/405 (57%), Gaps = 25/405 (6%) Query: 10 LNMAFARAREHRHEFMTVEHLLLALL------SNPSAREALEACSVDLVALRQELEAFIE 63 L +A A +H+H + H+L A + S P + +E D ++ + + Sbjct: 15 LTLAQKLASDHQHPQLQPIHILAAFIETPEDGSVPYLQNLIEKGRYDYDLFKKVVNRNLV 74 Query: 64 QTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYL 123 + PA E P+ + +VLQ A + + + ++L A+F++ Q + Sbjct: 75 RIPQQQPAPAE---ITPSYALGKVLQDAAKIQKQQKDSFIAQDHILFALFNDSSIQQIF- 130 Query: 124 LRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVG 183 + +++D+ T+ G+ N+ E + + ++ + AR G Sbjct: 131 ----KEAQVDIEAIKQQALELRGNTRIDSRGADTNTPL-----EYLSKYAIDMTEQARQG 181 Query: 184 GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC 243 +DP+IGRE+E+ I+VL RR K+NP L+GE G+GKTAI EG+A RI+ DVP ++ Sbjct: 182 KLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGA 241 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTIIGAGAASGGQVD 302 ++SLD+ +L AG KY+GDFE+RFK +LK++E+ T +LFIDEIH ++G G+ D Sbjct: 242 KLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMG-----NGKDD 296 Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLK 362 AAN++KP LS G+++VIG+TT E+ +I EKD A RRFQKI++ EPS+ +TV I+ GL+ Sbjct: 297 AANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVAILRGLQ 356 Query: 363 PKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 PKYE HH VR A+ A +LA +Y+ R LPD A+D++D + A Sbjct: 357 PKYEIHHGVRILDSALVTAAQLAKRYLPYRRLPDSALDLVDISCA 401 Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 122/327 (37%), Positives = 198/327 (60%), Gaps = 9/327 (2%) Query: 422 NVAD---IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 NV D I AR+ IP K +S+S+ + L ++ L V GQ AI+A++ A++++R Sbjct: 539 NVVDSDTISETAARLTGIPVKKLSESENEKLIHMERDLSSEVVGQMDAIKAVSNAVRLSR 598 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIG 535 +GL + +P SFLF G +G GKTE+ +++ L + ++R D SE E++ VS+L+G Sbjct: 599 SGLANPRQP-ASFLFLGLSGSGKTELAKKVAGFLFNDEDMMIRVDCSELSEKYAVSKLLG 657 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 GYVG+D+GG LT+ + P++VLL DE+EKAHPDV ++LQ++D+G +T G+ D Sbjct: 658 TTAGYVGYDEGGFLTNQLQYKPYSVLLFDEVEKAHPDVLTVMLQMLDDGRITSGQGKTID 717 Query: 596 FRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLST 655 N +++MT+N G + I + M +++ F PEF NR+ +I+ F+ LS Sbjct: 718 CSNCIVIMTSNLGAEFINSQQGSKIQESTKNLVMGAVRQHFRPEFLNRISSIVIFNKLSR 777 Query: 656 DVIHQVVDKFIVELQVQLDQ--KGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 IH++VD + E++ + +Q K L ++QEA+++LA+ GY MGARP+ R+IQ+ + Sbjct: 778 KAIHKIVDIRLKEIEERFEQNDKHYKLNLTQEAKDFLAKYGYSDDMGARPLNRLIQNEIL 837 Query: 714 KPLANELLFGSLVDGGQVTVALDKEKN 740 LA +L + D V V L K K+ Sbjct: 838 NKLALRILKNEIKDKETVNVVLKKGKS 864 Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust. Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 22/144 (15%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYS--LDIGSLLAGTK-YRGDFEKRF 267 L +G SG GKT +A+ +A + + + DC+ S + LL T Y G E F Sbjct: 611 LFLGLSGSGKTELAKKVAGFLFNDEDMMIRVDCSELSEKYAVSKLLGTTAGYVGYDEGGF 670 Query: 268 KALLKQLEQDTNSILFIDEIHT-----------IIGAGAASGGQ---VDAANLIKPLLSS 313 L QL+ S+L DE+ ++ G + GQ +D +N I + S+ Sbjct: 671 --LTNQLQYKPYSVLLFDEVEKAHPDVLTVMLQMLDDGRITSGQGKTIDCSNCIVIMTSN 728 Query: 314 GKIRVIGSTTYQEFSNIFEKDRAL 337 I S Q+ S I E + L Sbjct: 729 LGAEFINS---QQGSKIQESTKNL 749 >6E11-1 nrPDB Length = 906 Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 115/271 (42%), Positives = 179/271 (66%), Gaps = 5/271 (1%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 +E F +N+N+ R G + + GR++E+ I+ L R KN+P+LVG G GKT I EGL Sbjct: 190 IEQFGSNMNEKVRNGKLQGIYGRDEEIRAIIESLLRYNKNSPVLVGNPGTGKTTIVEGLV 249 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI-LFIDEI 287 +RI +GDVP+ + T+ SL+ +GT YRG+FE R K ++K+L+ N I LF+DEI Sbjct: 250 YRIEKGDVPKELQGYTVISLNFRKFTSGTSYRGEFETRMKNIIKELKNKKNKIILFVDEI 309 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 H ++GAG A GG DAANL+KP+LS G+I++IG+TT E+ E A RRF+KI + Sbjct: 310 HLLLGAGKAEGG-TDAANLLKPVLSKGEIKLIGATTIAEYRKFIESCSAFERRFEKILVE 368 Query: 348 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 407 PS++ TV+I+ LK KYE + + T KA+ AA +++ ++I DR+LPDKAID++++A + Sbjct: 369 PPSVDMTVKILRSLKSKYENFYGINITDKALVAAAKISDRFIKDRYLPDKAIDLLNKACS 428 Query: 408 RARLMPVSKRKKTVNVA--DIESVVARIARI 436 ++ +S + + ++V DIE + I+ + Sbjct: 429 FLQVQ-LSGKPRIIDVTERDIERLSYEISTL 458 Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 124/329 (37%), Positives = 193/329 (58%), Gaps = 28/329 (8%) Query: 426 IESVVARIARIPEKSVS-QSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 + + R + +P S+S +S + LK L + L + G + I++L++A+ A G+ Sbjct: 569 VSYIYLRDSGMPLGSLSFESSKGALK-LYNSLSKSIIGNEDIIKSLSDAVVKAATGMKDP 627 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALGIEL-------LRFDMSEYMERHTVSRLIGAP 537 KP+G+FLF GPTGVGKTE L+K L IEL +R +MSE+ E H+VS++ G+P Sbjct: 628 EKPIGTFLFLGPTGVGKTE----LAKTLAIELFNSKDNLIRVNMSEFTEAHSVSKITGSP 683 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVGF G LT+AV + PH+V+L DE+EKAH DVF +LLQ++ +G + DN+ R DF Sbjct: 684 PGYVGFSDSGQLTEAVREKPHSVVLFDELEKAHADVFKVLLQILGDGYINDNHRRNIDFS 743 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNS-----TDAMEEI--------KKIFTPEFRNRL 644 N +++MT+N G ++K DNS ME++ KK+F PEF NR+ Sbjct: 744 NTIIIMTSNLGAELFKKKL--FFDADNSGTPEYKRVMEDVRLSLIKKCKKVFKPEFVNRI 801 Query: 645 DNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPM 704 D I F+ L+ +H++V +L+ +L++K + + VS++A +++ ++ YD +GARP Sbjct: 802 DKIGVFEPLNKKNLHKIVALRFKKLEKRLEEKNIQVSVSEKAIDYIIDQSYDPELGARPT 861 Query: 705 ARVIQDNLKKPLANELLFGSLVDGGQVTV 733 I+ + A L LVD V V Sbjct: 862 LIFIESVIMTKFAIMYLKKELVDDMDVFV 890 >2P65-A nrPDB Length = 187 Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 99/187 (52%), Positives = 143/187 (76%), Gaps = 1/187 (0%) Query: 165 GEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIA 224 G + +E ++ +L LAR G +DP+IGR+ E+ RAIQ+L RR KNNP+L+G+ GVGKTAI Sbjct: 1 GYQALEKYSRDLTALARAGKLDPVIGRDTEIRRAIQILSRRTKNNPILLGDPGVGKTAIV 60 Query: 225 EGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILF 283 EGLA +IVQGDVP+ + + SLD+ SL+AG KYRGDFE+R K++LK+++ + ++F Sbjct: 61 EGLAIKIVQGDVPDSLKGRKLVSLDLSSLIAGAKYRGDFEERLKSILKEVQDAEGQVVMF 120 Query: 284 IDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 IDEIHT++GAGA + G +DA N++KP+L+ G++R IG+TT E+ EKD+AL RRFQ+ Sbjct: 121 IDEIHTVVGAGAVAEGALDAGNILKPMLARGELRCIGATTVSEYRQFIEKDKALERRFQQ 180 Query: 344 IDITEPS 350 I + +PS Sbjct: 181 ILVEQPS 187 >6EMW-B nrPDB Length = 225 Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 105/221 (47%), Positives = 154/221 (69%), Gaps = 11/221 (4%) Query: 441 VSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVG 500 +++++ + L +L D L V GQ A+ ++++A++ ARAGL +P+GSF+F GPTGVG Sbjct: 4 INETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVG 63 Query: 501 KTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHP 557 KTE+ L++++ + ++R DMSE+ME+H VSRL+GAPPGYVG D GG LT+ V + P Sbjct: 64 KTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKP 123 Query: 558 HAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERK-- 615 ++V+L DEIEKAHPDVFNILLQV+D+G LTD GR DFRN +++MT+N G +E + + Sbjct: 124 YSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQDQRF 183 Query: 616 ------SIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWF 650 S G ++ ++E+K F PEF NR+D+II F Sbjct: 184 AGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRVDDIIVF 224 >1JBK-A nrPDB Length = 195 Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 99/191 (51%), Positives = 142/191 (74%), Gaps = 2/191 (1%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 ++ +T +L + A G +DP+IGR++E+ R IQVL RR KNNP+L+GE GVGKTAI EGLA Sbjct: 5 LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 64 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQL-EQDTNSILFIDEI 287 RI+ G+VPE + + +LD+G+L+AG KYRG+FE+R K +L L +Q+ N ILFIDE+ Sbjct: 65 QRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 124 Query: 288 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 347 HT++GAG A G +DA N++KP L+ G++ +G+TT E+ EKD AL RRFQK+ + Sbjct: 125 HTMVGAGKADGA-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVA 183 Query: 348 EPSIEETVQII 358 EPS+E+T+ I+ Sbjct: 184 EPSVEDTIAIL 194 >6AMN-A nrPDB Length = 349 Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 124/356 (34%), Positives = 201/356 (56%), Gaps = 25/356 (7%) Query: 10 LNMAFARAREHRHEFMTVEHLLLALL------SNPSAREALEACSVDLVALRQELEAFIE 63 L +A A +H+H + H+L A + S P + +E D ++ + + Sbjct: 12 LTLAQKLASDHQHPQLQPIHILAAFIETPEDGSVPYLQNLIEKGRYDYDLFKKVVNRNLV 71 Query: 64 QTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYL 123 + PA E P+ + +VLQ A + + + ++L A+F++ Q + Sbjct: 72 RIPQQQPAPAE---ITPSYALGKVLQDAAKIQKQQKDSFIAQDHILFALFNDSSIQQIF- 127 Query: 124 LRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVG 183 + +++D+ T+ G+ N+ E + + ++ + AR G Sbjct: 128 ----KEAQVDIEAIKQQALELRGNTRIDSRGADTNTPL-----EYLSKYAIDMTEQARQG 178 Query: 184 GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC 243 +DP+IGRE+E+ I+VL RR K+NP L+GE G+GKTAI EG+A RI+ DVP ++ Sbjct: 179 KLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGA 238 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTIIGAGAASGGQVD 302 ++SLD+ +L AG KY+GDFE+RFK +LK++E+ T +LFIDEIH ++G G+ D Sbjct: 239 KLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMG-----NGKDD 293 Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 AAN++KP LS G+++VIG+TT E+ +I EKD A RRFQKI++ EPS+ +TV I+ Sbjct: 294 AANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVAIL 349 >6EMW-E nrPDB Length = 181 Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 94/181 (51%), Positives = 137/181 (75%), Gaps = 1/181 (0%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 +++ +L +A+ G +DP+IGR+KE+ R I+VL RR KNNP+L+GE GVGKTAIAEGLA Sbjct: 2 LDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLA 61 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 IV +VPE + D + SLD+G+++AGTKYRG+FE+R K ++++++Q N ILFIDE+H Sbjct: 62 QAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGNVILFIDELH 121 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 T++GAG A G +DA+N++KP L+ G+++ IG+TT E+ EKD AL RRFQ + + E Sbjct: 122 TLVGAGGAEGA-IDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDE 180 Query: 349 P 349 P Sbjct: 181 P 181 >6MAT-A nrPDB Length = 813 Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 116/508 (22%), Positives = 192/508 (37%), Gaps = 116/508 (22%) Query: 147 PTQSSD--PGSQPNSEEQAGGEERMENFTTNLNQLARVGGID------------PLIGRE 192 P S+D P +P +++ + ++ + + G+D PL G E Sbjct: 167 PASSTDRQPNGEPRPKKRKAAPKEIDRTPPTKVSILDIAGVDDTLQRLLKEVWFPLRGGE 226 Query: 193 KELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGS 252 A + + R N LL G SG GKT +A +A I +P + S Sbjct: 227 -----ACEKMGYRYDNGVLLHGPSGCGKTTLAHAIAGSIGVAFIP----------VSAPS 271 Query: 253 LLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLS 312 ++ GT G+ EK + + + + ++F+D+I I G ++ +++ + + + Sbjct: 272 VIGGTS--GESEKNIRDVFDEAIRLAPCLIFLDQIDAIAGRRESANKGMESRIVAEIMNG 329 Query: 313 SGKIR----------VIGSTTYQEFSNIFEKDRALARRFQ-KIDITEPSIEETVQIINGL 361 +IR V+ +T EF D A+ RRF +ID+ PS QI+ L Sbjct: 330 MDRIRQNTPLGKNVVVLAATNRPEFL-----DPAIRRRFSVEIDMGMPSERAREQILRSL 384 Query: 362 K------------------PKYEAHHDVRYTAKAV-----RAAVELAVKYINDRHLPDKA 398 P Y D++Y KA +A ++ + +H D Sbjct: 385 TRDLSLADDINFKELAKMTPGY-VGSDLQYVVKAAVSESFQANIDSLLAQARAKHPADHL 443 Query: 399 IDVI--------------DEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQS 444 +V +E + + + + +K V++ S + IP+ + S Sbjct: 444 ANVSQPQRDWLLLEAHRDEEVSWPSTKITMEQFRKAVSLVQPASKREGFSTIPDTTWSHV 503 Query: 445 DRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEV 504 L+++ +L+M + G K E T R G+ KP L GP G GKT V Sbjct: 504 G--ALEDVRKKLEMSIIGPIKNPELFT------RVGI----KPAAGILLWGPPGCGKTLV 551 Query: 505 TVQL---SKA-----LGIELLR--FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVI 554 + SKA G ELL SE R SR + P + FDQ DA++ Sbjct: 552 AKAVANESKANFISIKGPELLNKYVGESERAVRQLFSRAKSSAPCILFFDQ----MDALV 607 Query: 555 KHPHAVLLLDEIEKAHPDVFNILLQVMD 582 D + A V N LL +D Sbjct: 608 PRRD-----DSLSDASARVVNTLLTELD 630 Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 67/159 (42%), Gaps = 24/159 (15%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT +A+ +A + S+ LL KY G+ E+ + L Sbjct: 539 LLWGPPGCGKTLVAKAVANE----------SKANFISIKGPELL--NKYVGESERAVRQL 586 Query: 271 LKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLS--------SGKIRVIGST 322 + + ILF D++ ++ S +A ++ LL+ SG I VIG+T Sbjct: 587 FSRAKSSAPCILFFDQMDALVPRRDDSLSDA-SARVVNTLLTELDGVGDRSG-IYVIGAT 644 Query: 323 TYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL 361 + I E R R I + PS E+ V+I+ L Sbjct: 645 NRPDM--IDEAIRRPGRLGTSIYVGLPSAEDRVKILKTL 681 >5W0T-A nrPDB Length = 304 Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 50/262 (19%) Query: 182 VGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGV--------GKTAIAEGLAWRIVQ 233 +GG+DPLI E ++ N+PLL SGV GKT +A+ LA Sbjct: 44 IGGLDPLISDLHESVIYPLMMPEVYSNSPLLQAPSGVLLYGPPGCGKTMLAKALAKE--- 100 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGA 293 + S+ + S++ K+ G+ K A+ + I+FIDEI + + Sbjct: 101 -------SGANFISIRMSSIM--DKWYGESNKIVDAMFSLANKLQPCIIFIDEIDSFLRE 151 Query: 294 GAASGGQVDAA------NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK-IDI 346 +++ +V A L LL++G++ +IG+T + I + D A RR K + Sbjct: 152 RSSTDHEVTATLKAEFMTLWDGLLNNGRVMIIGAT-----NRINDIDDAFLRRLPKRFLV 206 Query: 347 TEPSIEETVQIINGLKPKY---EAHHDVRYTAKAVR-------------AAVELAVKYIN 390 + P ++ +I++ L E D++ A + AA++ A +YI Sbjct: 207 SLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDLKELCREAALDAAKEYIK 266 Query: 391 D-RHLPDKA-IDVIDEAGARAR 410 R L D IDV D + + R Sbjct: 267 QKRQLIDSGTIDVNDTSSLKIR 288 >4LGM-A nrPDB Length = 295 Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 41/199 (20%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT IA +A I D LD S++ +K+ G+ EK + Sbjct: 61 LLYGPPGCGKTMIAAAVANEI----------DSIFMQLDAASVM--SKWLGEAEKNVANV 108 Query: 271 LKQL-----EQDTNSILFIDEIHTIIGAGAAS-GGQVDAAN-LIKPL------LSSGKIR 317 K +Q+ +I+FID++ ++G + GG+ N +K + + K+ Sbjct: 109 FKMAREESKKQNKPAIIFIDQLDALLGVYSTEVGGEARVRNQFLKEMDGLLDKSENYKVY 168 Query: 318 VIGSTTYQEFSNIFEKDRALARRFQK-IDITEPSIEETVQIINGLKPKYEAHHDVR---- 372 VIG+T + + D A RRFQK I + P E+ + + K + +V Sbjct: 169 VIGAT-----NKPWRLDEAFLRRFQKRIYVPLPDYEQRLSLFKYYTSKIKLDTEVSLEEL 223 Query: 373 ------YTAKAVRAAVELA 385 YTA +R V+ A Sbjct: 224 AKLTEGYTASDIRDIVQAA 242 >6AP1-A nrPDB Length = 519 Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 30/150 (20%) Query: 204 RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDF 263 R+ + LL G G GK+ +A+ +A A+ T +S+ L+ +K+ G+ Sbjct: 64 RKPTSGILLYGPPGTGKSYLAKAVA----------TEANSTFFSVSSSDLV--SKWMGES 111 Query: 264 EKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL---------SSG 314 EK K L ++ SI+FIDE+ + G G+ +A+ IK L S Sbjct: 112 EKLVKQLFAMARENKPSIIFIDEVDALTGTRGE--GESEASRRIKTELLVQMNGVGNDSQ 169 Query: 315 KIRVIGSTTYQEFSNI-FEKDRALARRFQK 343 + V+G+T NI ++ D A+ RRF++ Sbjct: 170 GVLVLGAT------NIPWQLDSAIRRRFER 193 >3M6A-A nrPDB Length = 543 Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 22/130 (16%) Query: 491 FLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTV----SRLIGAPPGYV--GFD 544 AGP GVGKT + ++K+LG + +R + + + +GA PG + G Sbjct: 111 LCLAGPPGVGKTSLAKSIAKSLGRKFVRISLGGVRDESEIRGHRRTYVGAMPGRIIQGMK 170 Query: 545 QGGLLTDAVIKHPHAVLLLDEIEKAHPDV----FNILLQVMD---NGTLTDNNGRKA-DF 596 + G L + V LLDEI+K D + +L+V+D N + +D+ + D Sbjct: 171 KAGKL--------NPVFLLDEIDKMSSDFRGDPSSAMLEVLDPEQNSSFSDHYIEETFDL 222 Query: 597 RNVVLVMTTN 606 V+ + T N Sbjct: 223 SKVLFIATAN 232 >5XMK-A nrPDB Length = 437 Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 30/150 (20%) Query: 204 RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDF 263 R+ + LL G G GK+ +A+ +A A+ T +S+ L+ +K+ G+ Sbjct: 163 RKPTSGILLYGPPGTGKSYLAKAVA----------TEANSTFFSVSSSDLV--SKWMGES 210 Query: 264 EKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL---------SSG 314 EK K L ++ SI+FID++ + G G+ +A+ IK L S Sbjct: 211 EKLVKQLFAMARENKPSIIFIDQVDALTGTRGE--GESEASRRIKTELLVQMNGVGNDSQ 268 Query: 315 KIRVIGSTTYQEFSNI-FEKDRALARRFQK 343 + V+G+T NI ++ D A+ RRF++ Sbjct: 269 GVLVLGAT------NIPWQLDSAIRRRFER 292 >3EIH-A nrPDB Length = 340 Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 30/150 (20%) Query: 204 RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDF 263 R+ + LL G G GK+ +A+ +A A+ T +S+ L+ +K+ G+ Sbjct: 66 RKPTSGILLYGPPGTGKSYLAKAVA----------TEANSTFFSVSSSDLV--SKWMGES 113 Query: 264 EKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL---------SSG 314 EK K L ++ SI+FID++ + G G+ +A+ IK L S Sbjct: 114 EKLVKQLFAMARENKPSIIFIDQVDALTGTRGE--GESEASRRIKTELLVQMNGVGNDSQ 171 Query: 315 KIRVIGSTTYQEFSNI-FEKDRALARRFQK 343 + V+G+T NI ++ D A+ RRF++ Sbjct: 172 GVLVLGAT------NIPWQLDSAIRRRFER 195 >4I5O-A nrPDB Length = 363 Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 16/89 (17%) Query: 207 KNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRG-DFEK 265 K+N LL+G +G GKT +AE LA + DVP MAD T L Y G D E Sbjct: 51 KSNILLIGPTGSGKTLLAETLARLL---DVPFTMADATT--------LTEAGYVGEDVEN 99 Query: 266 RFKALLKQLEQDTN----SILFIDEIHTI 290 + LL++ + D I++IDEI I Sbjct: 100 IIQKLLQKCDYDVQKAQRGIVYIDEIDKI 128 Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust. Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 4/85 (4%) Query: 632 IKKIFTPEFRNRLDNIIWFDHLSTDVIHQVV----DKFIVELQVQLDQKGVSLEVSQEAR 687 IK PEF RL + + LS + + Q++ + + Q + +GV LE EA Sbjct: 235 IKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEAL 294 Query: 688 NWLAEKGYDRAMGARPMARVIQDNL 712 + +A+K R GAR + +++ L Sbjct: 295 DAIAKKAMARKTGARGLRSIVEAAL 319 >6B5D-A nrPDB Length = 309 Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 26/158 (16%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 +L G G GKT IA +A D + +K+RGD EK + L Sbjct: 67 VLAGPPGTGKTLIARAIASESSSTFFTVSSTDLS------------SKWRGDSEKIVRLL 114 Query: 271 LKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNI 330 + SI+FIDEI T +G + G+ +A+ +K S +++ GS + + Sbjct: 115 FELARFYAPSIIFIDEIDT-LGGQRGNSGEHEASRRVK---SEFLVQMDGSQNKFDSRRV 170 Query: 331 F---------EKDRALARRFQK-IDITEPSIEETVQII 358 F E D AL RRF+K I I P I+ ++I Sbjct: 171 FVLAATNIPWELDEALRRRFEKRIFIPLPDIDARKKLI 208 >5ZQM-A nrPDB Length = 309 Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 34/163 (20%) Query: 204 RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDF 263 RR L+VG G GKT +A+ +A +C ++ S +KYRG+ Sbjct: 59 RRPWKGVLMVGPPGTGKTLLAKAVA------------TECKTTFFNVSSSTLTSKYRGES 106 Query: 264 EKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL------------ 311 EK + L + + + +FIDEI +I S + +A+ +K L Sbjct: 107 EKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS-EEHEASRRVKAELLVQMDGVGGTSE 165 Query: 312 ---SSGKIRVIGSTTYQEFSNIFEKDRALARRFQK-IDITEPS 350 S + V+ +T + ++ D AL RR +K I I PS Sbjct: 166 NDDPSKMVMVLAATNFP-----WDIDEALRRRLEKRIYIPLPS 203 >1XWI-A nrPDB Length = 322 Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 30/151 (19%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GK+ +A+ +A + T +S+ L+ +K+ G+ EK K L Sbjct: 49 LLFGPPGTGKSYLAKAVA---------TEANNSTFFSISSSDLV--SKWLGESEKLVKNL 97 Query: 271 LKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL---------SSGKIRVIGS 321 + ++ SI+FIDEI ++ G+ S + +AA IK + I V+G+ Sbjct: 98 FQLARENKPSIIFIDEIDSL--CGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGA 155 Query: 322 TTYQEFSNIFEKDRALARRFQK---IDITEP 349 T + D A+ RRF+K I + EP Sbjct: 156 TNIP-----WVLDSAIRRRFEKRIYIPLPEP 181 >5WC0-A nrPDB Length = 472 Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 26/158 (16%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 +L G G GKT IA +A D + +K+RGD EK + L Sbjct: 230 VLAGPPGTGKTLIARAIASESSSTFFTVSSTDLS------------SKWRGDSEKIVRLL 277 Query: 271 LKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNI 330 + SI+FID+I T +G + G+ +A+ +K S +++ GS + + Sbjct: 278 FELARFYAPSIIFIDQIDT-LGGQRGNSGEHEASRRVK---SEFLVQMDGSQNKFDSRRV 333 Query: 331 F---------EKDRALARRFQK-IDITEPSIEETVQII 358 F E D AL RRF+K I I P I+ ++I Sbjct: 334 FVLAATNIPWELDEALRRRFEKRIFIPLPDIDARKKLI 371 >2ZAO-A nrPDB Length = 444 Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 29/143 (20%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GK+ +A+ +A + T +S+ L+ +K+ G+ EK K L Sbjct: 171 LLFGPPGTGKSYLAKAVA---------TEANNSTFFSISSSDLV--SKWLGESEKLVKNL 219 Query: 271 LKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL---------SSGKIRVIGS 321 + ++ SI+FIDEI ++ G+ S + +AA IK + I V+G+ Sbjct: 220 FQLARENKPSIIFIDEIDSL--CGSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGA 277 Query: 322 TTYQEFSNI-FEKDRALARRFQK 343 T NI + D A+ RRF+K Sbjct: 278 T------NIPWVLDSAIRRRFEK 294 >6B5C-A nrPDB Length = 307 Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 12/88 (13%) Query: 204 RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDF 263 RR L+VG G GKT +A+ +A +C ++ S +KYRG+ Sbjct: 55 RRPWKGVLMVGPPGTGKTMLAKAVA------------TECGTTFFNVSSSTLTSKYRGES 102 Query: 264 EKRFKALLKQLEQDTNSILFIDEIHTII 291 EK + L + + +FID+I +I Sbjct: 103 EKLVRLLFEMARFYAPTTIFIDQIDSIC 130 >5Z6Q-A nrPDB Length = 392 Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust. Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 31/155 (20%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT +A+ +A ++ T +++ SL +KY G+ EK +AL Sbjct: 155 LLFGPPGNGKTMLAKAVA----------AESNATFFNISAASLT--SKYVGEGEKLVRAL 202 Query: 271 LKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKP--------LLSSG--KIRVIG 320 + SI+FIDE+ +++ G+ DA+ +K + S+G ++ V+G Sbjct: 203 FAVARELQPSIIFIDEVDSLL--CERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMG 260 Query: 321 STTYQEFSNIFEKDRALARRF-QKIDITEPSIEET 354 +T + E D A+ RRF +++ ++ P+ EET Sbjct: 261 ATNRPQ-----ELDEAVLRRFIKRVYVSLPN-EET 289 >1E94-E nrPDB Length = 449 Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 21/105 (20%) Query: 460 VFGQDKAIEALTEAIK------MARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG 513 + GQD A ++ A++ L HE P + L GPTGVGKTE+ +L+K Sbjct: 23 IIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTP-KNILMIGPTGVGKTEIARRLAKLAN 81 Query: 514 IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL---LTDAVIK 555 ++ + +++ E GYVG + + LTDA +K Sbjct: 82 APFIKVEATKFTE-----------VGYVGKEVDSIIRDLTDAAVK 115 >5VC7-A nrPDB Length = 564 Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 26/122 (21%) Query: 211 LLVGESGVGKTAIAEGLA----WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKR 266 +L G G GKT IA +A + + PE+M +KY G E++ Sbjct: 47 ILYGPPGTGKTLIARAVANESGANFLSINGPEIM----------------SKYYGQSEQK 90 Query: 267 FKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVD------AANLIKPLLSSGKIRVIG 320 + + + E+ SI+FIDEI +I G+V+ L+ + G + VIG Sbjct: 91 LREIFSKAEETAPSIIFIDEIDSIAPKREEVQGEVERRVVAQLLTLMDGMKERGHVIVIG 150 Query: 321 ST 322 +T Sbjct: 151 AT 152 Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 27/158 (17%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G GVGKT +A+ +A ++ S+ +L +K+ G+ EK + + Sbjct: 324 LLYGPPGVGKTLLAKAVATE----------SNANFISIKGPEVL--SKWVGESEKAIREI 371 Query: 271 LKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS-------GKIRVIGSTT 323 K+ +Q +I+F+DEI +I + ++ LL+S + VIG+T Sbjct: 372 FKKAKQVAPAIVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATN 431 Query: 324 YQEFSNIFEKDRALAR--RFQK-IDITEPSIEETVQII 358 + D AL R RF K I I P E + I+ Sbjct: 432 RPDIM-----DPALLRAGRFDKLIYIPPPDKEARLSIL 464 >6NYV-B nrPDB Length = 314 Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 12/77 (15%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT +A +A +C+ L+I + +KY GD EK +AL Sbjct: 76 LLFGPPGNGKTLLARAVA------------TECSATFLNISAASLTSKYVGDGEKLVRAL 123 Query: 271 LKQLEQDTNSILFIDEI 287 SI+FIDE+ Sbjct: 124 FAVARHMQPSIIFIDEV 140 >5G4G-A nrPDB Length = 721 Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 26/122 (21%) Query: 211 LLVGESGVGKTAIAEGLA----WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKR 266 +L G G GKT IA +A + + PE+M +KY G E++ Sbjct: 223 ILYGPPGTGKTLIARAVANESGANFLSINGPEIM----------------SKYYGQSEQK 266 Query: 267 FKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVD------AANLIKPLLSSGKIRVIG 320 + + + E+ SI+FIDEI +I G+V+ L+ + G + VIG Sbjct: 267 LREIFSKAEETAPSIIFIDEIDSIAPKREEVQGEVERRVVAQLLTLMDGMKERGHVIVIG 326 Query: 321 ST 322 +T Sbjct: 327 AT 328 Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 27/158 (17%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G GVGKT +A+ +A ++ S+ +L +K+ G+ EK + + Sbjct: 500 LLYGPPGVGKTLLAKAVATE----------SNANFISIKGPEVL--SKWVGESEKAIREI 547 Query: 271 LKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS-------GKIRVIGSTT 323 K+ +Q +I+F+DEI +I + ++ LL+S + VIG+T Sbjct: 548 FKKAKQVAPAIVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATN 607 Query: 324 YQEFSNIFEKDRALAR--RFQK-IDITEPSIEETVQII 358 + D AL R RF K I I P E + I+ Sbjct: 608 RPDIM-----DPALLRAGRFDKLIYIPPPDKEARLSIL 640 >1OFI-A nrPDB Length = 310 Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 24/98 (24%) Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY 540 L HE P + L GPTGVGKTE+ +L+K ++ + +++ E GY Sbjct: 44 LRHEVTP-KNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTE-----------VGY 91 Query: 541 VG----------FDQGGLLTDAVIKHPHAVLLLDEIEK 568 VG D G DAV + ++ +DEI+K Sbjct: 92 VGKEVDSIIRDLTDSAGGAIDAV--EQNGIVFIDEIDK 127 Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 11/106 (10%) Query: 209 NPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRG---DFEK 265 N L++G +GVGKT IA LA + P + + T ++ ++G + G + D Sbjct: 52 NILMIGPTGVGKTEIARRLAK---LANAPFIKVEATKFT-EVGYV--GKEVDSIIRDLTD 105 Query: 266 RFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL 311 + +EQ N I+FIDEI I G SG V + + LL Sbjct: 106 SAGGAIDAVEQ--NGIVFIDEIDKICKKGEYSGADVSREGVQRDLL 149 >1UM8-A nrPDB Length = 376 Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust. Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 64/273 (23%) Query: 490 SFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLL 549 + L GPTG GKT + L+K L I + D + E GYVG D +L Sbjct: 74 NILLIGPTGSGKTLMAQTLAKHLDIPIAISDATSLTE-----------AGYVGEDVENIL 122 Query: 550 TDA-------VIKHPHAVLLLDEIEK--------------AHPDVFNILLQVMDNGTLTD 588 T V K ++ +DEI+K + V LL++++ G+L + Sbjct: 123 TRLLQASDWNVQKAQKGIVFIDEIDKISRLSENRSITRDVSGEGVQQALLKIVE-GSLVN 181 Query: 589 ---NNGRKADFRNVVLVMTTN-----AGV---------RETERKSIGLIHQDNSTDAMEE 631 GRK N + + T++ AG + T + +G + S E Sbjct: 182 IPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEA 241 Query: 632 IKKI----------FTPEFRNRLDNIIWFDHLS----TDVIHQVVDKFIVELQVQLDQKG 677 I + PE RL + D +S D++ + + I + Q Sbjct: 242 ILHLVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDE 301 Query: 678 VSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 710 V L +EA +A+ +R GAR + +I+D Sbjct: 302 VDLIFEEEAIKEIAQLALERKTGARGLRAIIED 334 Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 14/88 (15%) Query: 207 KNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKR 266 K+N LL+G +G GKT +A+ LA + D+P ++D T SL D E Sbjct: 72 KSNILLIGPTGSGKTLMAQTLAKHL---DIPIAISDAT-------SLTEAGYVGEDVENI 121 Query: 267 FKALLK----QLEQDTNSILFIDEIHTI 290 LL+ +++ I+FIDEI I Sbjct: 122 LTRLLQASDWNVQKAQKGIVFIDEIDKI 149 >4L16-A nrPDB Length = 334 Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 67/164 (40%), Gaps = 34/164 (20%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT I +A + C +I + +K+ G+ EK +AL Sbjct: 93 LLFGPPGTGKTMIGRCVA------------SQCKATFFNISASSLTSKWVGEGEKLVRAL 140 Query: 271 LKQLEQDTNSILFIDEIHTIIGAGAASGG------------QVDAANLIKPLLSSGKIRV 318 S++FIDEI +++ + + S Q+D N ++ V Sbjct: 141 FSVARLKLPSVIFIDEIDSLLSSRSESEHESSRRIKTEFLVQLDGVNTA----PDERLLV 196 Query: 319 IGSTTYQEFSNIFEKDRALARRFQK-IDITEPSIEETVQIINGL 361 +G+T + E D A RRFQK + I P E QI+ L Sbjct: 197 LGATNRPQ-----ELDEAARRRFQKRLYIALPEPESRTQIVQNL 235 >1IM2-A nrPDB Length = 444 Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 15/78 (19%) Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY 540 L HE P + L GPTGVGKTE+ +L+K ++ + +++ E GY Sbjct: 44 LRHEVTP-KNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTE-----------VGY 91 Query: 541 VGFDQGGL---LTDAVIK 555 VG + + LTD+ +K Sbjct: 92 VGKEVDSIIRDLTDSAMK 109 >2W0A-A nrPDB Length = 455 Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 12/91 (13%) Query: 205 RRK---NNPLLVGESGVGKTAIAEGLAWRIV-------QGDVPEVMADCTIYSLDIGSLL 254 RRK +N L GE G A E R++ + D+ + A+ TIY+ + L Sbjct: 95 RRKEMLHNAALRGEQMKGHAATIEDQVRRMIADWGEAGEIDLLDFFAELTIYT--SSACL 152 Query: 255 AGTKYRGDFEKRFKALLKQLEQDTNSILFID 285 G K+R + RF L +LE+ T+ + ++D Sbjct: 153 IGKKFRDQLDGRFAKLYHELERGTDPLAYVD 183 >3D8B-A nrPDB Length = 357 Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 12/81 (14%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT I + +A + T +S+ SL +K+ G+ EK +AL Sbjct: 121 LLFGPPGTGKTLIGKCIA----------SQSGATFFSISASSLT--SKWVGEGEKMVRAL 168 Query: 271 LKQLEQDTNSILFIDEIHTII 291 +++FIDEI +++ Sbjct: 169 FAVARCQQPAVIFIDEIDSLL 189 >3PVS-A nrPDB Length = 447 Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 38/184 (20%) Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 LA+ G L+ K L RAI+ ++ +L G G GKT +AE +A R DV Sbjct: 25 LAQYIGQQHLLAAGKPLPRAIEA---GHLHSMILWGPPGTGKTTLAEVIA-RYANADVER 80 Query: 239 VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN----SILFIDEIHTIIGAG 294 I ++ +G K + +++ Q+ N +ILF+DE+H Sbjct: 81 -----------ISAVTSGV-------KEIREAIERARQNRNAGRRTILFVDEVHRF---- 118 Query: 295 AASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEET 354 + Q DA P + G I IG+TT FE + AL R + + S E+ Sbjct: 119 --NKSQQDA---FLPHIEDGTITFIGATTENP---SFELNSALLSRARVYLLKSLSTEDI 170 Query: 355 VQII 358 Q++ Sbjct: 171 EQVL 174 >6CHS-H nrPDB Length = 819 Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 27/131 (20%) Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA------WRI 231 QLA++ + L R +L ++I + R LL G G GKT +A +A + + Sbjct: 228 QLAQIREMVELPLRHPQLFKSIGIKPPR---GVLLYGPPGTGKTLMARAVANETGAFFFL 284 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII 291 + G PE+M +K G+ E + ++ E+++ +I+FIDEI +I Sbjct: 285 ING--PEIM----------------SKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIA 326 Query: 292 GAGAASGGQVD 302 + G+V+ Sbjct: 327 PKREKTNGEVE 337 >4LCB-A nrPDB Length = 367 Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust. Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 30/146 (20%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT +A +A I D +D S++ +K+ G+ EK + Sbjct: 134 LLYGPPGNGKTMLAAAVANEI----------DSYFIHVDAASIM--SKWLGEAEKNVAKI 181 Query: 271 L---KQLEQDTN--SILFIDEIHTIIGAGAAS-GGQVDAAN-LIKPL------LSSGKIR 317 ++ + N +I+F+DEI ++G + GG+V N +K + + + Sbjct: 182 FNTAREYSKKDNKPAIIFVDEIDALLGTYTSEVGGEVRVRNQFLKEMDGIMDKNENYMVY 241 Query: 318 VIGSTTYQEFSNIFEKDRALARRFQK 343 VIG+T + + D RRFQK Sbjct: 242 VIGAT-----NKPWRLDEPFLRRFQK 262 >3HU1-A nrPDB Length = 489 Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 27/149 (18%) Query: 160 EEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVG 219 EE++ E ++ QLA++ + L R L +AI V + LL G G G Sbjct: 194 EEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGV---KPPRGILLYGPPGTG 250 Query: 220 KTAIAEGLA------WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ 273 KT IA +A + ++ G PE+M +K G+ E + ++ Sbjct: 251 KTLIARAVANETGAFFFLING--PEIM----------------SKLAGESESNLRKAFEE 292 Query: 274 LEQDTNSILFIDEIHTIIGAGAASGGQVD 302 E++ +I+FIDE+ I + G+V+ Sbjct: 293 AEKNAPAIIFIDELDAIAPKREKTHGEVE 321 >5EQT-A nrPDB Length = 257 Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 31/162 (19%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT +A+ LA + + T + +GS L KY G+ + L Sbjct: 43 LLYGPPGCGKTLMAKALAHEV----------NATFIRV-VGSELV-RKYIGEGARLVHEL 90 Query: 271 LKQLEQDTNSILFIDEIHTIIGA---GAASGGQVDAANLIKPLLSS-------GKIRVIG 320 + ++ +I+FIDEI IGA +GG+ + + LL+ G ++VI Sbjct: 91 FELAKEKAPTIIFIDEIDA-IGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIA 149 Query: 321 STTYQEFSNIFEKDRALAR--RFQK-IDITEPSIEETVQIIN 359 +T + D AL R RF + I++ P E ++I+ Sbjct: 150 ATNRPDIL-----DPALLRPGRFDRLIEVPLPDFEGRLEILK 186 >2R65-A nrPDB Length = 268 Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 13/91 (14%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LLVG G GKT +A+ +A A +S+ S + + G R + L Sbjct: 48 LLVGPPGTGKTLLAKAVAGE----------AHVPFFSMGGSSFI--EMFVGLGASRVRDL 95 Query: 271 LKQLEQDTNSILFIDEIHTIIGAGAASGGQV 301 + ++ SI+FIDEI IG A+GG V Sbjct: 96 FETAKKQAPSIIFIDEIDA-IGKSRAAGGVV 125 >5VFP-B nrPDB Length = 389 Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 21/121 (17%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 +L G G GKT +A+ +A + T + +GS L KY GD K + L Sbjct: 172 ILYGPPGTGKTLLAKAVANQ----------TSATFLRV-VGSELI-QKYLGDGPKLVREL 219 Query: 271 LKQLEQDTNSILFIDEIHTIIGA--GAASGGQVDAANLIKPLL-------SSGKIRVIGS 321 + E+ SI+FIDEI I + SGG+ + + LL S G ++VI + Sbjct: 220 FRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 279 Query: 322 T 322 T Sbjct: 280 T 280 >6MSK-B nrPDB Length = 440 Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 21/121 (17%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 +L G G GKT +A+ +A + T + +GS L KY GD K + L Sbjct: 223 ILYGPPGTGKTLLAKAVANQ----------TSATFLRV-VGSELI-QKYLGDGPKLVREL 270 Query: 271 LKQLEQDTNSILFIDEIHTIIGA--GAASGGQVDAANLIKPLL-------SSGKIRVIGS 321 + E+ SI+FIDEI I + SGG+ + + LL S G ++VI + Sbjct: 271 FRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 330 Query: 322 T 322 T Sbjct: 331 T 331 >4YPN-A nrPDB Length = 293 Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 25/150 (16%) Query: 473 AIKMARAGLGHEHK-PVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMS----EYMER 527 A++ GL +K P+ + GP GVGKT + +++++ + R + E R Sbjct: 129 AVRQLTQGLDVRNKAPI--LVLVGPPGVGKTSLGRSIARSMNRKFHRISLGGVRDEAEIR 186 Query: 528 HTVSRLIGAPPGYV--GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDV----FNILLQVM 581 IGA PG + Q G++ + V+LLDEI+K D + +L+V+ Sbjct: 187 GHRRTYIGAMPGKLIHAMKQVGVI--------NPVILLDEIDKMSSDWRGDPASAMLEVL 238 Query: 582 D---NGTLTDNN-GRKADFRNVVLVMTTNA 607 D N T TD+ D V + T N Sbjct: 239 DPEQNNTFTDHYLDVPYDLSKVFFITTANT 268 >3H4M-A nrPDB Length = 285 Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 29/154 (18%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT +A+ +A + T + +GS L K+ G+ K + Sbjct: 55 LLYGPPGTGKTLLAKAVATE----------TNATFIRV-VGSELV-KKFIGEGASLVKDI 102 Query: 271 LKQLEQDTNSILFIDEIHTIIG--AGAASGGQVDAANLIKPLLSS-------GKIRVIGS 321 K ++ SI+FIDEI I A +GG + + LL+ G +++IG+ Sbjct: 103 FKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGA 162 Query: 322 TTYQEFSNIFEKDRALAR--RFQKIDITEPSIEE 353 T + D A+ R RF +I I P+ +E Sbjct: 163 TNRPDIL-----DPAILRPGRFDRI-IEVPAPDE 190 >2CHV-A nrPDB Length = 319 Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 30/109 (27%) Query: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL------- 512 V GQD+ I+ L + E K + LF+GP G GKT + L++ L Sbjct: 19 VVGQDEVIQRLKGYV---------ERKNIPHLLFSGPPGTGKTATAIALARDLFGENWRD 69 Query: 513 -----------GIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLT 550 GI+++R + E+ + GAP + D+ LT Sbjct: 70 NFIEMNASDERGIDVVRHKIKEFARTAPIG---GAPFKIIFLDEADALT 115 >5VHO-B nrPDB Length = 267 Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 21/121 (17%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 +L G G GKT +A+ +A + + +GS L KY GD K + L Sbjct: 57 ILYGPPGTGKTLLAKAVANQT-----------SATFLRVVGSELI-QKYLGDGPKLVREL 104 Query: 271 LKQLEQDTNSILFIDEIHTIIGA--GAASGGQVDAANLIKPLL-------SSGKIRVIGS 321 + E+ SI+FIDEI I + SGG+ + + LL S G ++VI + Sbjct: 105 FRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 164 Query: 322 T 322 T Sbjct: 165 T 165 >5VHF-B nrPDB Length = 340 Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust. Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 21/121 (17%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 +L G G GKT +A+ +A + T + +GS L KY GD K + L Sbjct: 131 ILYGPPGTGKTLLAKAVANQ----------TSATFLRV-VGSELI-QKYLGDGPKLVREL 178 Query: 271 LKQLEQDTNSILFIDEIHTIIGA--GAASGGQVDAANLIKPLL-------SSGKIRVIGS 321 + E+ SI+FIDEI I + SGG+ + + LL S G ++VI + Sbjct: 179 FRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMA 238 Query: 322 T 322 T Sbjct: 239 T 239 >2CHG-A nrPDB Length = 226 Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 30/109 (27%) Query: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL------- 512 V GQD+ I+ L + E K + LF+GP G GKT + L++ L Sbjct: 19 VVGQDEVIQRLKGYV---------ERKNIPHLLFSGPPGTGKTATAIALARDLFGENWRD 69 Query: 513 -----------GIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLT 550 GI+++R + E+ + GAP + D+ LT Sbjct: 70 NFIEMNASDERGIDVVRHKIKEFARTAPIG---GAPFKIIFLDEADALT 115 >5M32-h nrPDB Length = 355 Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 13/89 (14%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT +A +A DCT + GS L K+ G+ + + L Sbjct: 150 LLYGPPGTGKTLLARAVAHH----------TDCTFIRVS-GSELV-QKFIGEGARMVREL 197 Query: 271 LKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + SI+F+DEI + IG+ GG Sbjct: 198 FVMAREHAPSIIFMDEIDS-IGSSRLEGG 225 >5GJQ-J nrPDB Length = 406 Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 13/89 (14%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT +A +A DCT + GS L K+ G+ + + L Sbjct: 187 LLYGPPGTGKTLLARAVAHH----------TDCTFIRVS-GSELV-QKFIGEGARMVREL 234 Query: 271 LKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + SI+F+DEI + IG+ GG Sbjct: 235 FVMAREHAPSIIFMDEIDS-IGSSRLEGG 262 >5VHP-C nrPDB Length = 266 Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 13/89 (14%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT +A +A DCT + GS L K+ G+ + + L Sbjct: 58 LLYGPPGTGKTLLARAVAHH----------TDCTFIRVS-GSELV-QKFIGEGARMVREL 105 Query: 271 LKQLEQDTNSILFIDEIHTIIGAGAASGG 299 + SI+F+DEI + IG+ GG Sbjct: 106 FVMAREHAPSIIFMDEIDS-IGSSRLEGG 133 >5UBV-A nrPDB Length = 246 Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 42/188 (22%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LLVG G GKT +A +A + VP + + Y G KR + L Sbjct: 43 LLVGPPGTGKTLLARAVAG---EAGVPFFYMSGSEFD---------EIYVGVGAKRVREL 90 Query: 271 LKQLEQDTNSILFIDEIHTIIGAGAASGGQVDA--ANLIKPLL------------SSGKI 316 + SI+FIDE+ I GG+ ++ A ++ L +SG I Sbjct: 91 FNAAKAKAPSIVFIDELDAI-------GGRRNSRDATYVRQTLNQLLTEMDGFAQNSGVI 143 Query: 317 RVIGSTTYQEFSNIFEKDRALAR--RFQK-IDITEPSIEETVQIINGLKPKYEAHHDVRY 373 ++G+T + E D+AL R RF + + ++ P + + I+ K + DV Sbjct: 144 -ILGATNFPE-----SLDKALTRPGRFDRHVHVSLPDVRGRIAILKHHAKKIKIGSDVNI 197 Query: 374 TAKAVRAA 381 A A R + Sbjct: 198 AAIAARTS 205 >3T1U-A nrPDB Length = 163 Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust. Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 638 PEFRNRLDNIIWFDHLSTDVIHQVVDKFIVE---LQVQLDQKGVSLEVSQEARNWLAEKG 694 PE + + H + H+V+D F+++ + + QK + EA N L+ K Sbjct: 21 PETAANFEQYVKDGHYDGTIFHRVIDGFMIQGGGFEPGMKQKSTRAPIKNEANNGLSNKK 80 Query: 695 YDRAMGARP 703 Y AM P Sbjct: 81 YTIAMARTP 89 >5TSG-B nrPDB Length = 588 Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 22/97 (22%) Query: 436 IPEKSVSQSDRDTLK-----NLGDRLKML--VFGQDKAIEALTEA-IKMARAGLGHE--- 484 I E+ + Q R +K ++ R+ +L +FG+ + L ++ +++ LG+E Sbjct: 267 IAERRLPQDGRIKIKLGGGQDMDYRVSVLPTLFGEKVVLRLLDKSNLQLDMTKLGYEPDA 326 Query: 485 --------HKPVGSFLFAGPTGVGKTEVTVQLSKALG 513 HKP G L GPTG GK TV L ALG Sbjct: 327 LHYFKEAIHKPFGMVLVTGPTGSGK---TVSLYSALG 360 >6MCK-A nrPDB Length = 606 Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust. Identities = 104/465 (22%), Positives = 172/465 (36%), Gaps = 88/465 (18%) Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA------WRI 231 QLA++ + L R L +AI V R LL G G GKT IA +A + + Sbjct: 4 QLAQIKEMVELPLRHPALFKAIGVKPPR---GILLYGPPGTGKTLIARAVANETGAFFFL 60 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII 291 + G PE+M +K G+ E + ++ E++ +I+FIDE+ I Sbjct: 61 ING--PEIM----------------SKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIA 102 Query: 292 GAGAASGGQVDAANLIKPLLS-----SGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDI 346 + G+V+ ++ LL+ + VI ++I R R +++DI Sbjct: 103 PKREKTHGEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 161 Query: 347 TEPSIEETVQI--INGLKPKYEAHHDVRYTAKAVRAAV---------ELAVKYINDR-HL 394 P ++I I+ K D+ A V E A++ I + L Sbjct: 162 GIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDL 221 Query: 395 PDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGD 454 D + ID + + + + ++ ++ ++ + +P+ V+ D L+++ Sbjct: 222 IDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQ--VTWEDIGGLEDVKR 279 Query: 455 RLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKT--------EVTV 506 L+ LV +E + +K P LF GP G GKT E Sbjct: 280 ELQELV---QYPVEHPDKFLKFGMT-------PSKGVLFYGPPGCGKTLLAKAIANECQA 329 Query: 507 QLSKALGIELLR--FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLD 564 G ELL F SE R + A P + FD+ LD Sbjct: 330 NFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDE-----------------LD 372 Query: 565 EIEKAHPDVFNILLQVMD---NGTLTDNNGRKADFRNVVLVMTTN 606 I KA D N LT+ +G +NV ++ TN Sbjct: 373 SIAKARGGNIGDGGGAADRVINQILTEMDGMSTK-KNVFIIGATN 416 >5C18-A nrPDB Length = 785 Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust. Identities = 106/483 (21%), Positives = 179/483 (37%), Gaps = 88/483 (18%) Query: 160 EEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVG 219 EE++ E ++ QLA++ + L R L +AI V + LL G G G Sbjct: 193 EEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGV---KPPRGILLYGPPGTG 249 Query: 220 KTAIAEGLA------WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ 273 KT IA +A + ++ G PE+M +K G+ E + ++ Sbjct: 250 KTLIARAVANETGAFFFLING--PEIM----------------SKLAGESESNLRKAFEE 291 Query: 274 LEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLS-----SGKIRVIGSTTYQEFS 328 E++ +I+FIDE+ I + G+V+ ++ LL+ + VI + Sbjct: 292 AEKNAPAIIFIDELDAIAPKREKTHGEVER-RIVSQLLTLMDGLKQRAHVIVMAATNRPN 350 Query: 329 NIFEKDRALARRFQKIDITEPSIEETVQI--INGLKPKYEAHHDVRYTAKAVRAAV---- 382 +I R R +++DI P ++I I+ K D+ A V Sbjct: 351 SIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADL 410 Query: 383 -----ELAVKYINDR-HLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARI 436 E A++ I + L D + ID + + + + ++ ++ ++ + + Sbjct: 411 AALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEV 470 Query: 437 PEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGP 496 P+ V+ D L+++ L+ LV +E + +K P LF GP Sbjct: 471 PQ--VTWEDIGGLEDVKRELQELV---QYPVEHPDKFLKFGMT-------PSKGVLFYGP 518 Query: 497 TGVGKT--------EVTVQLSKALGIELLR--FDMSEYMERHTVSRLIGAPPGYVGFDQG 546 G GKT E G ELL F SE R + A P + FD+ Sbjct: 519 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDE- 577 Query: 547 GLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD---NGTLTDNNGRKADFRNVVLVM 603 LD I KA D N LT+ +G +NV ++ Sbjct: 578 ----------------LDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTK-KNVFIIG 620 Query: 604 TTN 606 TN Sbjct: 621 ATN 623 >6MSD-E nrPDB Length = 403 Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust. Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 12/92 (13%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT +A +A ++ DC + S++ KY G+ + + + Sbjct: 185 LLYGPPGTGKTLLARAVASQL----------DCNFLKVVSSSIV--DKYIGESARLIREM 232 Query: 271 LKQLEQDTNSILFIDEIHTIIGAGAASGGQVD 302 I+F+DEI I G + G D Sbjct: 233 FNYARDHQPCIIFMDEIDAIGGRRFSEGTSAD 264 >4YPL-A nrPDB Length = 555 Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%) Query: 491 FLFAGPTGVGKTEVTVQLSKALGIELLRFDMS----EYMERHTVSRLIGAPPGYV--GFD 544 + GP GVGKT + +++++ + R + E R IGA PG + Sbjct: 113 LVLVGPPGVGKTSLGRSIARSMNRKFHRISLGGVRDEAEIRGHRRTYIGAMPGKLIHAMK 172 Query: 545 QGGLLTDAVIKHPHAVLLLDEIEKAHPDV----FNILLQVMD---NGTLTDNN-GRKADF 596 Q G++ + V+LLD+I+K D + +L+V+D N T TD+ D Sbjct: 173 QVGVI--------NPVILLDQIDKMSSDWRGDPASAMLEVLDPEQNNTFTDHYLDVPYDL 224 Query: 597 RNVVLVMTTN 606 V + T N Sbjct: 225 SKVFFITTAN 234 >6EPC-H nrPDB Length = 433 Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 67/175 (38%), Gaps = 29/175 (16%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT A +A R +P IGS L KY G+ + + L Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIPV-----------IGSELV-QKYVGEGARMVREL 260 Query: 271 LKQLEQDTNSILFIDEIHTIIGA----GAASGGQV-----DAANLIKPLLSSGKIRVIGS 321 + ++F DEI I GA GA +V + N + G I+V+ + Sbjct: 261 FEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA 320 Query: 322 TTYQEFSNIFEKDRALAR--RF-QKIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 T + D AL R R +KI+ + P +E I D+R+ Sbjct: 321 TNRPD-----TLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRF 370 >1NJG-A nrPDB Length = 250 Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 8/56 (14%) Query: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE 515 V GQ+ + AL + + R + H ++LF+G GVGKT + L+K L E Sbjct: 25 VVGQEHVLTALANGLSLGR--IHH------AYLFSGTRGVGKTSIARLLAKGLNCE 72 >3H1T-A nrPDB Length = 590 Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust. Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 170 ENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAW 229 E+ T L+ V G P ++ + RA+Q + + +K + L+ +G GKT +A ++W Sbjct: 162 EDLDTLLSPYHHVSGYSPRYYQQIAINRAVQSVLQGKKRS-LITMATGTGKTVVAFQISW 220 Query: 230 RI 231 ++ Sbjct: 221 KL 222 >3GLF-B nrPDB Length = 395 Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 8/56 (14%) Query: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE 515 V GQ+ + AL + + R + H ++LF+G GVGKT + L+K L E Sbjct: 40 VVGQEHVLTALANGLSLGR--IHH------AYLFSGTRGVGKTSIARLLAKGLNCE 87 >5VHP-E nrPDB Length = 262 Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust. Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 12/92 (13%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT +A +A ++ DC + S++ KY G+ + + + Sbjct: 44 LLYGPPGTGKTLLARAVASQL----------DCNFLKVVSSSIV--DKYIGESARLIREM 91 Query: 271 LKQLEQDTNSILFIDEIHTIIGAGAASGGQVD 302 I+F+DEI I G + G D Sbjct: 92 FNYARDHQPCIIFMDEIDAIGGRRFSEGTSAD 123 >5VHO-A nrPDB Length = 267 Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 67/175 (38%), Gaps = 29/175 (16%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT A +A R D + IGS L KY G+ + + L Sbjct: 56 LLFGPPGTGKTLCARAVANR----------TDACFIRV-IGSELV-QKYVGEGARMVREL 103 Query: 271 LKQLEQDTNSILFIDEIHTIIGA----GAASGGQV-----DAANLIKPLLSSGKIRVIGS 321 + ++F DEI I GA GA +V + N + G I+V+ + Sbjct: 104 FEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA 163 Query: 322 TTYQEFSNIFEKDRALAR--RF-QKIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 T + D AL R R +KI+ + P +E I D+R+ Sbjct: 164 TNRPD-----TLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRF 213 >5VFU-A nrPDB Length = 361 Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 67/175 (38%), Gaps = 29/175 (16%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT A +A R D + IGS L KY G+ + + L Sbjct: 141 LLFGPPGTGKTLCARAVANR----------TDACFIRV-IGSELV-QKYVGEGARMVREL 188 Query: 271 LKQLEQDTNSILFIDEIHTIIGA----GAASGGQV-----DAANLIKPLLSSGKIRVIGS 321 + ++F DEI I GA GA +V + N + G I+V+ + Sbjct: 189 FEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMA 248 Query: 322 TTYQEFSNIFEKDRALAR--RF-QKIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 T + D AL R R +KI+ + P +E I D+R+ Sbjct: 249 TNRPD-----TLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRF 298 >6HE9-H nrPDB Length = 390 Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust. Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 40/239 (16%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT +A+ +A + T + +GS KY G+ + + + Sbjct: 171 LLYGPPGTGKTLLAKAVANQ----------TRATFIRV-VGSEFV-QKYIGEGARLVREV 218 Query: 271 LKQLEQDTNSILFIDEIHTIIG--AGAASGGQVDAANLIKPLLSS-------GKIRVIGS 321 + ++ SI+FIDE+ I + + G + + LL+ G ++VIG+ Sbjct: 219 FQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGA 278 Query: 322 TTYQEFSNIFEKDRALAR--RFQK-IDITEPSIEETVQI--INGLKPKYEAHHDVRYTAK 376 T + I D A+ R RF + I++ P+ E +QI I+ K K D + A+ Sbjct: 279 T-----NRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELAR 333 Query: 377 AVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR-----KKTVNVADIESVV 430 A +K I + + I E A+ ++ +K KKT + D++ V+ Sbjct: 334 ITEGASGADIKAICT----EAGMFAIREERAKVTMLDFTKAIEKVLKKTTPIPDLKGVM 388 >1SXJ-D nrPDB Length = 353 Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 10/60 (16%) Query: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIELLR 518 V QD A+ L + +K A L H LF GP G GKT + L+K L G +L++ Sbjct: 39 VTAQDHAVTVLKKTLK--SANLPH-------MLFYGPPGTGKTSTILALTKELYGPDLMK 89 >3WHK-A nrPDB Length = 270 Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 31/176 (17%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT +A+ +A + + T + +GS L KY G+ + L Sbjct: 55 LLYGPPGCGKTLMAKAIAHEV----------NATFIRV-VGSELV-RKYIGEGARLVHEL 102 Query: 271 LKQLEQDTNSILFIDEIHTIIGA---GAASGGQVDAANLIKPLLSS-------GKIRVIG 320 + ++ +I+FIDEI IGA +GG+ + + LL+ G ++VI Sbjct: 103 FELAKEKAPTIIFIDEIDA-IGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIA 161 Query: 321 STTYQEFSNIFEKDRALAR--RFQK-IDITEPSIEETVQIINGLKPKYEAHHDVRY 373 +T + D AL R RF + I++ P QI+ K D+ + Sbjct: 162 ATNRPDIL-----DPALLRPGRFDRLIEVPLPDEFSRAQILQIHSRKMTTDDDINW 212 >6EF3-H nrPDB Length = 467 Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 12/83 (14%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT A +A R D T + IGS L KY G+ + + L Sbjct: 247 LLYGPPGTGKTLCARAVANR----------TDATFIRV-IGSELV-QKYVGEGARMVREL 294 Query: 271 LKQLEQDTNSILFIDEIHTIIGA 293 + I+F DEI + GA Sbjct: 295 FEMARTKKACIIFFDEIDAVGGA 317 >5IY9-V nrPDB Length = 782 Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust. Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 22/159 (13%) Query: 467 IEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTV-QLSKALGIELLRFDMSEYM 525 +EA + K A+ L +PV PT V + ++T L A+ + L D++EY+ Sbjct: 86 LEAFSPVYKYAQDFLVAIAEPV-----CRPTHVHEYKLTAYSLYAAVSVGLQTSDITEYL 140 Query: 526 ERHTVSRLIGAPPGYVGFDQGGLLTDA----VIKHPHAVLLLDEIEKAHPDVFNILLQ-- 579 + + + G P G + F + ++ V+KH +E HPDV LLQ Sbjct: 141 RKLSKT---GVPDGIMQFIKLCTVSYGKVKLVLKHNRYF-----VESCHPDVIQHLLQDP 192 Query: 580 VMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIG 618 V+ L ++ G + + T+ + + +T S G Sbjct: 193 VIRECRLRNSEGEATEL--ITETFTSKSAISKTAESSGG 229 >1LV7-A nrPDB Length = 257 Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 15/91 (16%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 L+VG G GKT +A+ +A + VP TI D + G R + + Sbjct: 49 LMVGPPGTGKTLLAKAIAG---EAKVPFF----TISGSDFVEMFVGVGA-----SRVRDM 96 Query: 271 LKQLEQDTNSILFIDEIHTII---GAGAASG 298 +Q ++ I+FIDEI + GAG G Sbjct: 97 FEQAKKAAPCIIFIDEIDAVGRQRGAGLGGG 127 >6EF0-H nrPDB Length = 257 Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 12/83 (14%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT A +A R D T + IGS L KY G+ + + L Sbjct: 47 LLYGPPGTGKTLCARAVANR----------TDATFIRV-IGSELV-QKYVGEGARMVREL 94 Query: 271 LKQLEQDTNSILFIDEIHTIIGA 293 + I+F DEI + GA Sbjct: 95 FEMARTKKACIIFFDEIDAVGGA 117 >3JCO-J nrPDB Length = 405 Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 29/160 (18%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 +L G G GKT +A +A DC + L+ KY G+ + + L Sbjct: 186 ILYGPPGTGKTLLARAVAHH----------TDCKFIRVSGAELV--QKYIGEGSRMVREL 233 Query: 271 LKQLEQDTNSILFIDEIHTI--IGAGAASGGQVDAANLIKPLL-------SSGKIRVIGS 321 + SI+F+DEI +I + GG + + LL +S I++I + Sbjct: 234 FVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMA 293 Query: 322 TTYQEFSNIFEKDRALAR--RF-QKIDITEPSIEETVQII 358 T + D AL R R +KI+ PS+ +I+ Sbjct: 294 TNRLDIL-----DPALLRPGRIDRKIEFPPPSVAARAEIL 328 >5ZFR-A nrPDB Length = 582 Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 22/96 (22%) Query: 436 IPEKSVSQSDRDTLK-----NLGDRLKML--VFGQDKAIEALTEA-IKMARAGLGHE--- 484 I E+ + Q R +K ++ R+ +L +FG+ + L ++ +++ LG+E Sbjct: 261 IAERRLPQDGRIKIKMGGGQDMDYRVSVLPTLFGEKVVLRLLDKSNLQLDMTKLGYEPTA 320 Query: 485 --------HKPVGSFLFAGPTGVGKTEVTVQLSKAL 512 HKP G L GPTG GK TV L AL Sbjct: 321 LSYFKEAIHKPFGMVLVTGPTGSGK---TVSLYSAL 353 >5EXS-A nrPDB Length = 260 Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC-TIYSLDIGSLLAGTKYRGDFEKRFKA 269 L++GESG GK +A L + + + P V +C I + + S L G + +G F + Sbjct: 37 LILGESGTGKEVVARNLHYHSKRREGPFVPVNCGAIPAELLESELFGHE-KGAFTGAITS 95 Query: 270 LLKQLEQDTNSILFIDEI 287 + E LF+DEI Sbjct: 96 RAGRFELANGGTLFLDEI 113 >6EF2-J nrPDB Length = 262 Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 12/80 (15%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 +L G G GKT +A +A DC + L+ KY G+ + + L Sbjct: 43 ILYGPPGTGKTLLARAVAHH----------TDCKFIRVSGAELV--QKYIGEGSRMVREL 90 Query: 271 LKQLEQDTNSILFIDEIHTI 290 + SI+F+DEI +I Sbjct: 91 FVMAREHAPSIIFMDEIDSI 110 >6HE4-H nrPDB Length = 267 Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 29/175 (16%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT +A+ +A + T + +GS KY G+ + + + Sbjct: 57 LLYGPPGTGKTLLAKAVANQ----------TRATFIRV-VGSEFV-QKYIGEGARLVREV 104 Query: 271 LKQLEQDTNSILFIDEIHTIIG--AGAASGGQVDAANLIKPLLSS-------GKIRVIGS 321 + ++ SI+FIDE+ I + + G + + LL+ G ++VIG+ Sbjct: 105 FQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGA 164 Query: 322 TTYQEFSNIFEKDRALAR--RFQK-IDITEPSIEETVQIINGLKPKYEAHHDVRY 373 T + I D A+ R RF + I++ P+ E +QI K + DV + Sbjct: 165 T-----NRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDF 214 >5EXX-A nrPDB Length = 343 Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC-TIYSLDIGSLLAGTKYRGDFEKRFKA 269 L++GESG GK +A L + + + P V +C I + + S L G + +G F + Sbjct: 37 LILGESGTGKEVVARNLHYHSKRREGPFVPVNCGAIPAELLESELFGHE-KGAFTGAITS 95 Query: 270 LLKQLEQDTNSILFIDEI 287 + E LF+DEI Sbjct: 96 RAGRFELANGGTLFLDEI 113 >3JCP-I nrPDB Length = 437 Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 12/80 (15%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 +L G G GKT +A+ +A + T + +GS L KY GD + + + Sbjct: 220 ILYGAPGTGKTLLAKAVANQ----------TSATFLRI-VGSELI-QKYLGDGPRLCRQI 267 Query: 271 LKQLEQDTNSILFIDEIHTI 290 K ++ SI+FIDEI I Sbjct: 268 FKVAGENAPSIVFIDEIDAI 287 >2DHR-A nrPDB Length = 499 Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 15/95 (15%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LLVG GVGKT +A +A + VP + A + D + G R + L Sbjct: 68 LLVGPPGVGKTHLARAVAG---EARVPFITASGS----DFVEMFVGVG-----AARVRDL 115 Query: 271 LKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAAN 305 + ++ I+FIDEI + G G V N Sbjct: 116 FETAKRHAPCIVFIDEIDAV---GRKRGSGVGGGN 147 >2ZXU-A nrPDB Length = 316 Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 18/86 (20%) Query: 487 PVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQG 546 P FL GPT GKT + ++L K L +EL+ D S LI Y G D G Sbjct: 10 PKAIFLM-GPTASGKTALAIELRKILPVELISVD----------SALI-----YKGMDIG 53 Query: 547 GLLTDA--VIKHPHAVLLLDEIEKAH 570 +A ++ PH +L + + +A+ Sbjct: 54 TAKPNAEELLAAPHRLLDIRDPSQAY 79 >1J3B-A nrPDB Length = 529 Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust. Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Query: 666 IVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 + +V L+ GV E+ W ++ YD+ AR +AR+ Q+N +K Sbjct: 466 VFGFEVPLEAPGVPQELLNPRETWADKEAYDQQ--ARKLARLFQENFQK 512 >4WW4-B nrPDB Length = 513 Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 8/88 (9%) Query: 188 LIGREKELERAIQVLCRRRKNN-----PLLVGESGVGKTAIAEGLAWRIVQGDVP-EVMA 241 L+G+EK + A VL ++ L+ G GKTAIA G+A + Q DVP +A Sbjct: 71 LVGQEKARKAAAVVLEMIKQGKIAGRAVLIAGPPSTGKTAIAMGMAQSLGQ-DVPFTTLA 129 Query: 242 DCTIYSLDIGSLLAGTK-YRGDFEKRFK 268 I+SL++ A T+ +R R K Sbjct: 130 ASEIFSLEMSKTEALTQAFRKSIGVRIK 157 Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 6/55 (10%) Query: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVG-SFLFAGPTGVGKTEVTVQLSKALG 513 + GQ+KA +A ++M + G K G + L AGP GKT + + ++++LG Sbjct: 71 LVGQEKARKAAAVVLEMIKQG-----KIAGRAVLIAGPPSTGKTAIAMGMAQSLG 120 >2Z4R-A nrPDB Length = 440 Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 31/168 (18%) Query: 198 AIQVLCRRRKNNPLLV-GESGVGKTAIAEGLAWRIVQGD--------VPEVMADCTIYSL 248 A++V + NPL + G G+GKT + + + +VQ + E + + S+ Sbjct: 120 ALEVAKHPGRYNPLFIYGGVGLGKTHLLQSIGNYVVQNEPDLRVMYITSEKFLNDLVDSM 179 Query: 249 DIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIK 308 G L ++R + K+ IL ID++ +IG +G Q + + Sbjct: 180 KEGKL---NEFREKYRKKV------------DILLIDDVQFLIG---KTGVQTELFHTFN 221 Query: 309 PLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK--IDITEPSIEET 354 L SGK VI S +E + E L RFQ + EP EET Sbjct: 222 ELHDSGKQIVICSD--REPQKLSEFQDRLVSRFQMGLVAKLEPPDEET 267 >6EF1-I nrPDB Length = 271 Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 12/80 (15%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 +L G G GKT +A+ +A + T + +GS L KY GD + + + Sbjct: 54 ILYGAPGTGKTLLAKAVANQ----------TSATFLRI-VGSELI-QKYLGDGPRLCRQI 101 Query: 271 LKQLEQDTNSILFIDEIHTI 290 K ++ SI+FIDEI I Sbjct: 102 FKVAGENAPSIVFIDEIDAI 121 >6FVU-I nrPDB Length = 384 Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 12/80 (15%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 +L G G GKT +A+ +A + T + +GS L KY GD + + + Sbjct: 167 ILYGAPGTGKTLLAKAVANQ----------TSATFLRI-VGSELI-QKYLGDGPRLCRQI 214 Query: 271 LKQLEQDTNSILFIDEIHTI 290 K ++ SI+FIDEI I Sbjct: 215 FKVAGENAPSIVFIDEIDAI 234 >2QZ4-A nrPDB Length = 262 Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 13/98 (13%) Query: 193 KELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGS 252 K ER +Q L + LL+G G GKT +A+ +A + VP + + IG Sbjct: 26 KSPERFLQ-LGAKVPKGALLLGPPGCGKTLLAKAVA---TEAQVPFLAMAGAEFVEVIGG 81 Query: 253 LLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTI 290 L A R ++L K+ I++IDEI + Sbjct: 82 LGAA---------RVRSLFKEARARAPCIVYIDEIDAV 110 >6MFV-A nrPDB Length = 653 Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust. Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 23/119 (19%) Query: 185 IDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE----GLAWRIVQGDVPEVM 240 ++ +GR++EL + R K ++ G +G+GKT++A W V G + Sbjct: 12 VEVFVGRKRELS-----IIRNAKGVVVIYGIAGIGKTSLAAKAFPNAYWYNVTG-----L 61 Query: 241 ADCTIYSLDIGSLLAGTKYR---------GDFEKRFKALLKQLEQDTNSILFIDEIHTI 290 D ++ +G L+ + G+ E L+ + + T +I+ ID+ H Sbjct: 62 EDFKYFAWQLGLFLSSIGFEDLLEYLRGGGNNENDIFKLITEGIEKTGAIIIIDDFHKF 120 >6F8L-G nrPDB Length = 913 Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust. Identities = 13/25 (52%), Positives = 15/25 (60%) Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSK 510 KP G FL GPTG GK+ T + K Sbjct: 639 KPYGIFLITGPTGSGKSFTTFSILK 663 >5C3C-A nrPDB Length = 281 Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust. Identities = 59/246 (23%), Positives = 98/246 (39%), Gaps = 53/246 (21%) Query: 469 ALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERH 528 A+ + I++ RAG ++ + GPTG GK+ ++ L L+ +E M Sbjct: 32 AVQDEIELYRAG----YEARIPMMLKGPTGCGKSRFVEHMAWKLNRPLITIACNEDM--- 84 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDA---VIKHPHAVLLLDEIEKAHPDVFNILLQVMDN-- 583 T S L+G Y+ G D V A+ LDEI +A D ++ + D+ Sbjct: 85 TASDLVGR---YLLDKDGTRWQDGPLTVAARIGAICYLDEIVEARQDTIVVIHPLTDHRR 141 Query: 584 -------GTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIF 636 G L + + DF+ +V++ N G +Q D + K+ F Sbjct: 142 VLPLEKKGELVEAH---PDFQ---IVISYNPG------------YQSLMKDLKQSTKQRF 183 Query: 637 TPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYD 696 LD FD+ D+ ++V E V D ++++Q+ARN L G D Sbjct: 184 -----GALD----FDYPKPDIEAEIVSH---EAGVDKDTAEKLVQIAQKARN-LKGHGLD 230 Query: 697 RAMGAR 702 + R Sbjct: 231 EGLSTR 236 >4F0L-A nrPDB Length = 458 Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%) Query: 389 INDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDT 448 I+ H+ D+ + +AGA A L PV++ N+ D A K SD + Sbjct: 277 IHATHMSDEETKHMAKAGAIAGLCPVTE----ANLGDGTFNATEFAAAGGKFGIGSDSNV 332 Query: 449 LKNLGDRLKMLVFGQ 463 L +GD L+ L + Q Sbjct: 333 LIGIGDELRQLEYSQ 347 >2AWD-A nrPDB Length = 323 Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust. Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%) Query: 609 VRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHL 653 ++E R SI ++H+ N T+ +E + E N L+N FD L Sbjct: 85 IKEETRDSIAILHEGNQTEILEAGPTVSPEEISNFLEN---FDQL 126 >2CE7-A nrPDB Length = 476 Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust. Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 15/91 (16%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LLVG G GKT +A +A + +VP I D L G R + L Sbjct: 53 LLVGPPGTGKTLLARAVAG---EANVPFFH----ISGSDFVELFVGVGA-----ARVRDL 100 Query: 271 LKQLEQDTNSILFIDEIHTI---IGAGAASG 298 Q + I+FIDEI + GAG G Sbjct: 101 FAQAKAHAPCIVFIDEIDAVGRHRGAGLGGG 131 >1IQP-A nrPDB Length = 327 Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust. Identities = 15/33 (45%), Positives = 19/33 (57%) Query: 491 FLFAGPTGVGKTEVTVQLSKALGIELLRFDMSE 523 LFAGP GVGKT + L++ L E R + E Sbjct: 49 LLFAGPPGVGKTTAALALARELFGENWRHNFLE 81 >1IN6-A nrPDB Length = 334 Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 25/116 (21%) Query: 178 QLARVGGIDPLIGRE---KELERAIQVLCRRRK--NNPLLVGESGVGKTAIAEGLAWRIV 232 Q R +D IG+E K+L A++ R + ++ LL G G+G+T +A +A Sbjct: 17 QFLRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGRTTLAHIIA---- 72 Query: 233 QGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 E+ + + S G +L +GD A+L LE+ +LFIDEIH Sbjct: 73 ----SELQTNIHVTS---GPVLVK---QGDM----AAILTSLER--GDVLFIDEIH 112 >6ABJ-A nrPDB Length = 345 Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%) Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRA 336 G V+AA LI+ L SG++ +G Y+E ++IF +DR+ Sbjct: 251 GALVNAAALIEAL-KSGQLGYLGLDVYEEEADIFFEDRS 288 >2YV5-A nrPDB Length = 302 Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 15/61 (24%) Query: 492 LFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYME--RHTVS--RLI--------GAPPG 539 + AGP+GVGK+ + LS+ G EL ++SE E RHT + RLI G PG Sbjct: 169 ILAGPSGVGKSSI---LSRLTGEELRTQEVSEKTERGRHTTTGVRLIPFGKGSFVGDTPG 225 Query: 540 Y 540 + Sbjct: 226 F 226 >2V1U-A nrPDB Length = 387 Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Query: 186 DPLIGREKELERAIQVLCR----RRKNNPLLVGESGVGKTAIA 224 D L RE EL R +VL + +N LL G +G GKTA+A Sbjct: 19 DVLPHREAELRRLAEVLAPALRGEKPSNALLYGLTGTGKTAVA 61 >3EXA-A nrPDB Length = 322 Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust. Identities = 13/28 (46%), Positives = 18/28 (64%) Query: 493 FAGPTGVGKTEVTVQLSKALGIELLRFD 520 GPT VGKT+ +V L+K L E++ D Sbjct: 8 IVGPTAVGKTKTSVMLAKRLNGEVISGD 35 >2XSZ-D nrPDB Length = 378 Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVP-EVMADCTIYSLDIGSLLAGTK 258 L+ G+ G GKTAIA G+A + + D P +A I+SL++ A T+ Sbjct: 89 LIAGQPGTGKTAIAMGMA-QALGPDTPFTAIAGSEIFSLEMSKTEALTQ 136 >3GL5-A nrPDB Length = 239 Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 10/84 (11%) Query: 213 VGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLK 272 GE +G A AEGLA+R D + D+ LL K RG E A + Sbjct: 74 AGEDNLGAQAAAEGLAYRTRDRDHGS--------TFDLHRLLHLAKERGRHEALLDAFYR 125 Query: 273 QLEQDTNSILFIDE--IHTIIGAG 294 D S+ DE + +GAG Sbjct: 126 GNFADERSVFNDDERLVELAVGAG 149 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1R6B-X nrPDB 1012 0.0 6EM8-A nrPDB 834 0.0 3J3U-A nrPDB 813 0.0 3PXI-A nrPDB 733 0.0 5OFO-C nrPDB 455 e-128 4CIU-A nrPDB 438 e-123 3PXG-A nrPDB 436 e-122 5VY8-A nrPDB 423 e-118 4LJ8-A nrPDB 412 e-115 6ED3-A nrPDB 411 e-115 6D00-1 nrPDB 407 e-114 1QVR-A nrPDB 403 e-112 5D4W-A nrPDB 383 e-106 6AMN-A nrPDB 362 e-100 6E11-1 nrPDB 361 e-100 6EMW-B nrPDB 311 8e-85 4HSE-A nrPDB 309 2e-84 6MAT-A nrPDB 308 7e-84 1JBK-A nrPDB 266 3e-71 6EMW-E nrPDB 251 8e-67 2P65-A nrPDB 248 7e-66 5W0T-A nrPDB 190 3e-48 4LGM-A nrPDB 146 3e-35 6AP1-A nrPDB 144 2e-34 3EIH-A nrPDB 143 4e-34 5XMK-A nrPDB 142 6e-34 2ZAO-A nrPDB 142 6e-34 1XWI-A nrPDB 141 1e-33 5ZQM-A nrPDB 140 2e-33 6B5D-A nrPDB 139 4e-33 5WC0-A nrPDB 137 2e-32 3M6A-A nrPDB 111 1e-24 4I5O-A nrPDB 69 7e-12 Sequences not found previously or not previously below threshold: 5C18-A nrPDB 157 2e-38 6MCK-A nrPDB 155 7e-38 6CHS-H nrPDB 154 1e-37 5VC7-A nrPDB 151 1e-36 5G4G-A nrPDB 148 6e-36 6B5C-A nrPDB 141 1e-33 4LCB-A nrPDB 133 4e-31 3D8B-A nrPDB 122 7e-28 4D81-A nrPDB 117 2e-26 5Z6Q-A nrPDB 117 2e-26 3HU1-A nrPDB 110 2e-24 6NYV-B nrPDB 104 1e-22 4L16-A nrPDB 102 6e-22 3CF0-A nrPDB 101 9e-22 6HE9-H nrPDB 101 2e-21 6HE4-H nrPDB 100 2e-21 6MSK-B nrPDB 100 3e-21 5VFP-B nrPDB 100 4e-21 5EQT-A nrPDB 100 4e-21 5VHF-B nrPDB 99 7e-21 6MDP-A nrPDB 98 1e-20 3H4M-A nrPDB 98 1e-20 5UBV-A nrPDB 98 1e-20 5VHP-E nrPDB 98 1e-20 3WHK-A nrPDB 98 2e-20 5VHO-B nrPDB 98 2e-20 1LV7-A nrPDB 96 5e-20 6MSD-E nrPDB 95 9e-20 5VFU-A nrPDB 95 9e-20 2X8A-A nrPDB 95 9e-20 5VHO-A nrPDB 95 1e-19 6EPC-H nrPDB 94 1e-19 4Z8X-A nrPDB 94 2e-19 6EF0-H nrPDB 94 3e-19 6EF3-H nrPDB 93 5e-19 5M32-h nrPDB 92 1e-18 6EF0-L nrPDB 91 1e-18 5GJQ-J nrPDB 91 2e-18 6EF2-J nrPDB 91 2e-18 6EF0-M nrPDB 90 3e-18 5VHN-D nrPDB 90 4e-18 5VHP-C nrPDB 89 5e-18 5VFP-F nrPDB 89 5e-18 3JCP-I nrPDB 89 5e-18 6FVU-I nrPDB 89 6e-18 6EPD-M nrPDB 89 7e-18 3JCO-J nrPDB 89 8e-18 5A5B-M nrPDB 89 9e-18 5VHO-F nrPDB 88 1e-17 6FVU-L nrPDB 88 1e-17 5KWA-A nrPDB 88 2e-17 5T0C-AD nrPDB 88 2e-17 6AZ0-A nrPDB 88 2e-17 5WVI-L nrPDB 88 2e-17 2DHR-A nrPDB 88 2e-17 6EF1-I nrPDB 87 3e-17 1IY1-A nrPDB 87 3e-17 4YPL-A nrPDB 86 6e-17 2R65-A nrPDB 86 7e-17 2CE7-A nrPDB 85 9e-17 5E7P-A nrPDB 83 5e-16 4YPN-A nrPDB 82 7e-16 6EF1-K nrPDB 79 7e-15 5WVI-K nrPDB 79 9e-15 2QZ4-A nrPDB 73 5e-13 4XGU-A nrPDB 61 2e-09 5VQ9-D nrPDB 61 3e-09 1OFI-A nrPDB 58 2e-08 1UM8-A nrPDB 57 3e-08 3PVS-A nrPDB 56 8e-08 5J1S-A nrPDB 53 5e-07 2CHV-A nrPDB 48 2e-05 1IM2-A nrPDB 48 2e-05 2CHG-A nrPDB 47 2e-05 1HQC-A nrPDB 47 4e-05 2QBY-A nrPDB 46 4e-05 1E94-E nrPDB 46 7e-05 1D2N-A nrPDB 46 8e-05 1IQP-A nrPDB 46 9e-05 3SYK-A nrPDB 44 2e-04 4WW4-B nrPDB 44 2e-04 1NJG-A nrPDB 44 3e-04 2XSZ-D nrPDB 43 4e-04 2XSZ-A nrPDB 43 4e-04 3GLF-B nrPDB 43 5e-04 2Z4R-A nrPDB 43 6e-04 2R44-A nrPDB 42 6e-04 2V1U-A nrPDB 42 7e-04 5UJ7-C nrPDB 42 8e-04 1SXJ-A nrPDB 41 0.001 1SXJ-D nrPDB 41 0.002 1SXJ-C nrPDB 41 0.002 4UPB-C nrPDB 41 0.002 6QI8-A nrPDB 41 0.003 5C3C-A nrPDB 41 0.003 3U5Z-B nrPDB 40 0.003 1IN6-A nrPDB 40 0.004 6QI9-D nrPDB 40 0.005 1U0J-A nrPDB 40 0.005 5BQ5-A nrPDB 40 0.005 4L4U-A nrPDB 40 0.005 6GEJ-U nrPDB 39 0.006 1NY5-A nrPDB 39 0.006 1KAG-A nrPDB 39 0.006 4QHS-A nrPDB 39 0.006 1OJL-A nrPDB 39 0.007 4LZZ-A nrPDB 39 0.011 4ZPX-A nrPDB 38 0.014 3IIK-A nrPDB 38 0.015 6MFV-A nrPDB 37 0.027 4Y0A-A nrPDB 37 0.028 3K1J-A nrPDB 37 0.029 5EP0-A nrPDB 36 0.054 3CRQ-A nrPDB 36 0.066 6BLB-A nrPDB 35 0.097 5JZV-A nrPDB 35 0.12 2GZA-A nrPDB 34 0.17 3BE4-A nrPDB 34 0.19 5EP3-A nrPDB 34 0.21 5M7N-A nrPDB 34 0.21 4HI0-E nrPDB 34 0.24 3PFI-A nrPDB 34 0.28 6GEJ-T nrPDB 34 0.29 2GA8-A nrPDB 34 0.29 3GP8-A nrPDB 34 0.32 5FM7-A nrPDB 34 0.36 4BS1-B nrPDB 33 0.38 5EXS-A nrPDB 33 0.41 5LKM-A nrPDB 33 0.42 5EXX-A nrPDB 33 0.49 1SXJ-B nrPDB 33 0.50 3TRF-A nrPDB 33 0.58 5U8S-7 nrPDB 32 0.63 3DZD-A nrPDB 32 0.69 4A2W-A nrPDB 32 0.73 1B74-A nrPDB 32 0.75 3OZX-A nrPDB 32 0.76 6QEL-G nrPDB 32 0.78 2QBY-B nrPDB 32 0.80 1YE8-A nrPDB 32 0.86 3FVQ-A nrPDB 32 0.87 6MJP-A nrPDB 32 0.89 1J8M-F nrPDB 32 0.92 2ZXU-A nrPDB 32 0.93 4A2Q-A nrPDB 32 0.97 2SHK-A nrPDB 32 1.1 1Y63-A nrPDB 32 1.2 5ZFQ-A nrPDB 31 1.4 5I8Q-A nrPDB 31 1.4 6C2V-A nrPDB 31 1.5 2I3B-A nrPDB 31 1.5 4R7Y-A nrPDB 31 1.6 3A4L-A nrPDB 31 1.7 4CVN-A nrPDB 31 1.9 1YB4-A nrPDB 31 1.9 3B85-A nrPDB 31 2.1 5NSS-F nrPDB 31 2.3 6BKF-A nrPDB 31 2.3 2C98-A nrPDB 31 2.3 4OV4-A nrPDB 31 2.4 5TSG-B nrPDB 31 2.7 1D9Z-A nrPDB 31 3.0 3EPJ-A nrPDB 30 3.2 3SR0-A nrPDB 30 3.8 2D62-A nrPDB 30 4.3 2IYT-A nrPDB 30 4.4 5UCD-A nrPDB 30 4.7 3TR0-A nrPDB 30 5.2 3D31-A nrPDB 29 6.0 1E3H-A nrPDB 29 6.0 1YPX-A nrPDB 29 6.3 3E70-C nrPDB 29 8.2 1U35-C nrPDB 29 8.4 >1R6B-X nrPDB Length = 758 Score = 1012 bits (2616), Expect = 0.0, Method: Composition-based stats. Identities = 757/758 (99%), Positives = 758/758 (100%) Query: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA Sbjct: 1 MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEA 60 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA Sbjct: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEER+ENFTTNLNQLA Sbjct: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERLENFTTNLNQLA 180 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM Sbjct: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ Sbjct: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQ 300 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING Sbjct: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIING 360 Query: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT Sbjct: 361 LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKT 420 Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG Sbjct: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY 540 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY Sbjct: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGY 540 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV Sbjct: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ Sbjct: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL Sbjct: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 Query: 721 LFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH 758 LFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH Sbjct: 721 LFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH 758 >6EM8-A nrPDB Length = 818 Score = 834 bits (2153), Expect = 0.0, Method: Composition-based stats. Identities = 297/817 (36%), Positives = 475/817 (58%), Gaps = 93/817 (11%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 L + + L A A H + EHLLL L+ P A + LE+ ++ + +E+E Sbjct: 6 LTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVE 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 I + T ++V++ ++ + N V ++L+ + E E Sbjct: 66 KLIGH------GQDHVGTLHYTPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGV 119 Query: 120 AAYLLRKHEV----SRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTN 175 AA + ++ +R VV + + ++ Q+S + P +++ + Sbjct: 120 AARVFANLDLNITKARAQVVKALGNPEMSNKNAQASKSNNTPT----------LDSLARD 169 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 L +A+ G +DP+IGR+KE+ R I+VL RR KNNP+L+GE GVGKTAIAEGLA IV + Sbjct: 170 LTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNE 229 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGA 295 VPE + D + SLD+G+++AGTKYRG+FE+R K ++++++Q N ILFIDE+HT++GAG Sbjct: 230 VPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGNVILFIDELHTLVGAGG 289 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 A G +DA+N++KP L+ G+++ IG+TT E+ EKD AL RRFQ + + EPS+ +TV Sbjct: 290 AEGA-IDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTV 348 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA------ 409 I+ GL+ +YEAHH + + +A+ AAV+L+ +Y++DR LPDKAID+IDEA ++ Sbjct: 349 AILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHT 408 Query: 410 ------------------------------------RLMPVSKR---------------K 418 + + K+ Sbjct: 409 TPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEAKNEWKNAQNGMS 468 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 +++ DI V+A IP +++++ + L +L D L V GQ A+ ++++A++ AR Sbjct: 469 TSLSEEDIAEVIAGWTGIPLTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRAR 528 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIG 535 AGL +P+GSF+F GPTGVGKTE+ L++++ + ++R DMSE+ME+H VSRL+G Sbjct: 529 AGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVG 588 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 APPGYVG D GG LT+ V + P++V+L DEIEKAHPDVFNILLQV+D+G LTD GR D Sbjct: 589 APPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVD 648 Query: 596 FRNVVLVMTTNAGVRETERK--------SIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNI 647 FRN +++MT+N G +E + + S G ++ ++E+K F PEF NR+D+I Sbjct: 649 FRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRVDDI 708 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 I F L+ + + ++V + +L +L ++ +++ V+ +A++ +AE+GYD GARP+ R Sbjct: 709 IVFHKLTKEELKEIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRA 768 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTY 744 IQ ++ L+ +L G+ ++G +VTV D + E Y Sbjct: 769 IQKTIEDNLSELILDGNQIEGKKVTV--DHDGKEFKY 803 >3J3U-A nrPDB Length = 810 Score = 813 bits (2099), Expect = 0.0, Method: Composition-based stats. Identities = 305/816 (37%), Positives = 467/816 (57%), Gaps = 93/816 (11%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + + L +A A H + EH+LL L+ A +AL+A + +++E+E Sbjct: 6 FTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVE 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + I + E + T ++V++ ++ + G + V ++L+ + E E Sbjct: 66 SLIGR------GQEMSQTIHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGV 119 Query: 120 AAYLLRKHEVS----RLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTN 175 AA +L VS R V+ + T SS G+ N+ +++ + Sbjct: 120 AARVLNNLGVSLNKARQQVLQLLGSN-----ETGSSAAGTNSNANTPT-----LDSLARD 169 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 L +A+ +DP+IGR KE++R I+VL RR KNNP+L+GE GVGKTAIAEGLA +I+ + Sbjct: 170 LTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNE 229 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGA 295 VPE++ D + +LD+G+++AGTKYRG+FE R K ++ ++ Q N ILFID +HT+IGAG Sbjct: 230 VPEILRDKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDALHTLIGAGG 289 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 A G +DA+N++KP L+ G+++ IG+TT E+ EKD AL RRFQ I + +PS++E++ Sbjct: 290 AEGA-IDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESI 348 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE----------- 404 QI+ GL+ +YEAHH V T A+ AAV+L+ +YI+DR LPDKAID+IDE Sbjct: 349 QILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFT 408 Query: 405 -------------------------------AGARARLMPVS---------------KRK 418 A R + + Sbjct: 409 TPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQEN 468 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 V V DI VV+ +P ++Q++ D L N+ + L V GQD+A+ A+ +A++ AR Sbjct: 469 SEVTVDDIAMVVSSWTGVPVSKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRAR 528 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIG 535 AGL +P+GSF+F GPTGVGKTE+ L++++ + ++R DMSEYME+H+ SRL+G Sbjct: 529 AGLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVG 588 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 +PPGYVG+D+GG LT+ V + P++V+LLD IEKAHPDVFNILLQV+++G LTD+ GR D Sbjct: 589 SPPGYVGYDEGGQLTEKVRRKPYSVVLLDAIEKAHPDVFNILLQVLEDGRLTDSKGRTVD 648 Query: 596 FRNVVLVMTTNAGVRETER--------KSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNI 647 FRN +L+MT+N G E +R + H+D M E+K+ F PEF NR+D I Sbjct: 649 FRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEI 708 Query: 648 IWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARV 707 I F L + ++V +L +L ++ +S+E++ A+ +AE+G D GARP+ R Sbjct: 709 IVFHSLEKKHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRA 768 Query: 708 IQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELT 743 IQ +++ L+ ELL G++ G + LD E E Sbjct: 769 IQKHVEDRLSEELLRGNIHKGQHI--VLDVEDGEFV 802 >3PXI-A nrPDB Length = 758 Score = 733 bits (1892), Expect = 0.0, Method: Composition-based stats. Identities = 282/808 (34%), Positives = 432/808 (53%), Gaps = 129/808 (15%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + + L +A A H + EH+LL L+ A +AL+A + +++E+E Sbjct: 6 FTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVE 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + I + E + T ++V++ ++ + G + V ++L+ + E E Sbjct: 66 SLIGR------GQEMSQTIHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGV 119 Query: 120 AAYLLRKHEVS----RLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTN 175 AA +L VS R V+ + T SS G+ N+ +++ + Sbjct: 120 AARVLNNLGVSLNKARQQVLQLLGSN-----ETGSSAAGTNSNANTPT-----LDSLARD 169 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 L +A+ +DP+IGR KE++R I+VL RR KNNP+L+GE GVGKTAIAEGLA +I+ + Sbjct: 170 LTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNE 229 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGA 295 VPE++ D + +LD+ GTKYRG+FE R K ++ ++ Q N ILFID Sbjct: 230 VPEILRDKRVMTLDM-----GTKYRGEFEDRLKKVMDEIRQAGNIILFID---------- 274 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 +DA+N++KP L+ G+++ IG+TT E+ EKD AL RRFQ I + +PS++E++ Sbjct: 275 ---AAIDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESI 331 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE----------- 404 QI+ GL+ +YEAHH V T A+ AAV+L+ +YI+DR LPDKAID+IDE Sbjct: 332 QILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFT 391 Query: 405 -------------------------------AGARARLMPVS---------------KRK 418 A R + + Sbjct: 392 TPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQEN 451 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 V V DI VV+ +P ++Q++ D L N+ + L V GQD+A+ A+ +A++ AR Sbjct: 452 SEVTVDDIAMVVSSWTGVPVSKIAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRAR 511 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIG 535 AGL +P+GSF+F GPTGVGKTE+ L++++ + ++R DMSEYME+H+ S Sbjct: 512 AGLKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEESMIRIDMSEYMEKHSTS---- 567 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 GG LT+ V + P++V+LLD IEKAHPDVFNILLQV+++G LTD+ GR D Sbjct: 568 ----------GGQLTEKVRRKPYSVVLLDAIEKAHPDVFNILLQVLEDGRLTDSKGRTVD 617 Query: 596 FRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLST 655 FRN +L+MT+N G E M E+K+ F PEF NR+D II F L Sbjct: 618 FRNTILIMTSNVGASE-------------KDKVMGELKRAFRPEFINRIDEIIVFHSLEK 664 Query: 656 DVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKP 715 + ++V +L +L ++ +S+E++ A+ +AE+G D GARP+ R IQ +++ Sbjct: 665 KHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDR 724 Query: 716 LANELLFGSLVDGGQVTVALDKEKNELT 743 L+ ELL G++ G + LD E E Sbjct: 725 LSEELLRGNIHKGQHI--VLDVEDGEFV 750 >5OFO-C nrPDB Length = 871 Score = 455 bits (1171), Expect = e-128, Method: Composition-based stats. Identities = 232/793 (29%), Positives = 376/793 (47%), Gaps = 80/793 (10%) Query: 3 NQELELSLNMAFARAREHRHEFMTVE-HLLLALLSNPSAREALEACSVDLVALRQELEAF 61 +Q+L LN+ A++ F++ E +L AL S + + L+A + Q +E Sbjct: 88 SQDLVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQM 147 Query: 62 -----------------IEQTTPVLPASEEERDTQPTLSFQRVLQRAVF-HVQSSGRNEV 103 +++ T L E+ P + ++R + + + N V Sbjct: 148 RGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPV 207 Query: 104 TGANVLVAIFSEQESQAAYL--------LRKHEVSRLDVVNFISHGTRKDEPTQSSDPGS 155 V + E A + L+ V LD+ ++ + E + Sbjct: 208 LIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVL 267 Query: 156 QPNSEEQAGGEERMENFTTNLNQLARVGGID------PLIGREK----------ELERAI 199 ++++ ++ T + G +D P + R + E + I Sbjct: 268 NDLAKQEGNVILFIDALHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYI 327 Query: 200 QV---LCRRRKNNPLLVGESGVGKT-AIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLA 255 + L RR + + V E V T AI GL R ++ + + Sbjct: 328 EKDAALERRFQK--VFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIV-----AAATL 380 Query: 256 GTKYRGDFEKRFKALLKQLEQDTNSI-LFID----EIHTIIGAGAASGGQVDAANLIKPL 310 +Y D + + +++ +SI + ID E+ + + A Sbjct: 381 SHRYIAD-RQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDE 439 Query: 311 LSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGL-KPKYEAHH 369 S ++ ++ + E + ++ + S+ T I L + K Sbjct: 440 ASKKRLDMLNEELSDKERQYSELE-------EEWKAEKASLSGTQTIKAELEQAKIAIEQ 492 Query: 370 DVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESV 429 R A + ++ ++ L EA + + + V A+I V Sbjct: 493 ARRVGDLARMSELQYGKIPELEKQL---------EAATQLEGKTMRLLRNKVTDAEIAEV 543 Query: 430 VARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVG 489 +AR IP + +S+R+ L + L V GQ++A++A++ AI+ +RAGL ++P+G Sbjct: 544 LARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIG 603 Query: 490 SFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQG 546 SFLF GPTGVGKTE+ L+ + ++R DMSE+ME+H+VSRL+GAPPGYVG+++G Sbjct: 604 SFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEG 663 Query: 547 GLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN 606 G LT+AV + P++V+LLD +EKAHPDVFNILLQV+D+G LTD GR DFRN V++MT+N Sbjct: 664 GYLTEAVRRRPYSVILLDAVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSN 723 Query: 607 AGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFI 666 GVRETERKSIGLIHQDNSTDAMEEIKKIF PEF NR+D ++ F L I + + Sbjct: 724 LGVRETERKSIGLIHQDNSTDAMEEIKKIFRPEFINRIDEVVVFHPLGEQHIASIAQIQL 783 Query: 667 VELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLV 726 L +L+++G + +S EA L+E GYD GARP+ R IQ ++ PLA ++L G LV Sbjct: 784 KRLYKRLEERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELV 843 Query: 727 DGGQVTVALDKEK 739 G + + +++++ Sbjct: 844 PGKVIRLEVNEDR 856 Score = 434 bits (1116), Expect = e-122, Method: Composition-based stats. Identities = 166/455 (36%), Positives = 260/455 (57%), Gaps = 21/455 (4%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELE 59 L + +L+L A + A H ++F+ HL+ ALL+ S L + ++ LR ++ Sbjct: 10 LTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVSPLLTSAGINAGQLRTDIN 69 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + V D QP+ RVL Q G N ++ ++A E Sbjct: 70 QALNRLPQVEGT---GGDVQPSQDLVRVLNLCDKLAQKRGDNFISSELFVLAAL-ESRGT 125 Query: 120 AAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQL 179 A +L+ + ++ I E + + + +E+Q + ++ +T +L + Sbjct: 126 LADILKAAGATTANITQAI-------EQMRGGESVNDQGAEDQ---RQALKKYTIDLTER 175 Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEV 239 A G +DP+IGR++E+ R IQVL RR KNNP+L+GE GVGKTAI EGLA RI+ G+VPE Sbjct: 176 AEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEG 235 Query: 240 MADCTIYSLDIGSLLAGTKYRGDFEKRFKALL-KQLEQDTNSILFIDEIHTIIGAGAASG 298 + + +LD+G+L+AG KYRG+FE+R K +L +Q+ N ILFID +HT++GAG A G Sbjct: 236 LKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDALHTMVGAGKADG 295 Query: 299 GQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 +DA N++KP L+ G++ +G+TT E+ EKD AL RRFQK+ + EPS+E+T+ I+ Sbjct: 296 A-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAIL 354 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK 418 GLK +YE HH V+ T A+ AA L+ +YI DR LPDKAID+IDEA + R+ SK + Sbjct: 355 RGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPE 414 Query: 419 KTVNVADIESVVARIARIPEKSVSQSDRDTLKNLG 453 + ++ + ++ + + +SD + K L Sbjct: 415 ---ELDRLDRRIIQLKLEQQALMKESDEASKKRLD 446 Score = 30.2 bits (66), Expect = 3.9, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 128/375 (34%), Gaps = 35/375 (9%) Query: 398 AIDVIDEAGARAR--LMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR 455 D++ AGA + + + +V D + R +++ + D + Sbjct: 126 LADILKAAGATTANITQAIEQMRGGESVNDQGAEDQR------QALKKYTIDLTERAEQG 179 Query: 456 LKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE 515 V G+D+ I + ++ ++ PV G GVGKT + L++ + Sbjct: 180 KLDPVIGRDEEIRRTIQVLQR-----RTKNNPV----LIGEPGVGKTAIVEGLAQRIING 230 Query: 516 LLRFDMSEYMERHTVSRLIGAPPGYVG-FDQ--GGLLTDAVIKHPHAVLLLDEIE----- 567 + + + A Y G F++ G+L D + + +L +D + Sbjct: 231 EVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDALHTMVGA 290 Query: 568 ---KAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN 624 D N+L + G L D + R ++ + ++ Sbjct: 291 GKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAAL-ERRFQKVFVAEPSVED 349 Query: 625 STDAMEEIKKIFTPEFRNRLDN--IIWFDHLSTDVI--HQVVDKFIVELQVQLDQKGVSL 680 + + +K+ + ++ + I+ LS I Q+ DK I + + + Sbjct: 350 TIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQI 409 Query: 681 EVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN 740 + E + L + + + + + + KK L ++L L D + L++E Sbjct: 410 DSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRL--DMLNEELSDKERQYSELEEEWK 467 Query: 741 ELTYGFQSAQKHKAE 755 Q KAE Sbjct: 468 AEKASLSGTQTIKAE 482 >4CIU-A nrPDB Length = 727 Score = 438 bits (1125), Expect = e-123, Method: Composition-based stats. Identities = 139/339 (41%), Positives = 212/339 (62%), Gaps = 3/339 (0%) Query: 404 EAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQ 463 EA + + + V A+I V+AR IP + +S+R+ L + L V GQ Sbjct: 372 EAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQ 431 Query: 464 DKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFD 520 ++A++A++ AI+ +RAGL ++P+GSFLF GPTGVGKTE+ L+ + ++R D Sbjct: 432 NEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRID 491 Query: 521 MSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQV 580 MSE+ME+H+VSRL+GAPPGYVG+++GG LT+AV + P++V+LLD +EKAHPDVFNILLQV Sbjct: 492 MSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDAVEKAHPDVFNILLQV 551 Query: 581 MDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEF 640 +D+G LTD GR DFRN V++MT+N G + + L + + + F PEF Sbjct: 552 LDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKELVLGVVSHNFRPEF 611 Query: 641 RNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMG 700 NR+D ++ F L I + + L +L+++G + +S EA L+E GYD G Sbjct: 612 INRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDEALKLLSENGYDPVYG 671 Query: 701 ARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEK 739 ARP+ R IQ ++ PLA ++L G LV G + + +++++ Sbjct: 672 ARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDR 710 Score = 338 bits (867), Expect = 5e-93, Method: Composition-based stats. Identities = 132/309 (42%), Positives = 199/309 (64%), Gaps = 6/309 (1%) Query: 148 TQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRK 207 + + + +E+Q + ++ +T +L + A G +DP+IGR++E+ R IQVL RR K Sbjct: 1 MRGGESVNDQGAEDQ---RQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTK 57 Query: 208 NNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRF 267 NNP+L+GE GVGKTAI EGLA RI+ G+VPE + + +LD+G+L+AG KYRG+FE+R Sbjct: 58 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 117 Query: 268 KALL-KQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQE 326 K +L +Q+ N ILFID +HT++GAG A G +DA N++KP L+ G++ +G+TT E Sbjct: 118 KGVLNDLAKQEGNVILFIDALHTMVGAGKADGA-MDAGNMLKPALARGELHCVGATTLDE 176 Query: 327 FSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAV 386 + EKD AL RRFQK+ + EPS+E+T+ I+ GLK +YE HH V+ T A+ AA L+ Sbjct: 177 YRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSH 236 Query: 387 KYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDR 446 +YI DR LPDKAID+IDEA + R+ SK + ++ D + ++ + S Sbjct: 237 RYIADRQLPDKAIDLIDEAASSIRMQIDSK-PEELDRLDRRIIQLKLEQQALMKASDEAS 295 Query: 447 DTLKNLGDR 455 ++ + Sbjct: 296 KKRLDMLNE 304 Score = 32.9 bits (73), Expect = 0.49, Method: Composition-based stats. Identities = 47/305 (15%), Positives = 104/305 (34%), Gaps = 26/305 (8%) Query: 18 REHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERD 77 + R + +E L S+ ++++ L+ + +L ++ E+ + + Sbjct: 273 LDRRIIQLKLEQQALMKASDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQT 332 Query: 78 TQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNF 137 + L ++ A+ + G + + + E E Q + + + N Sbjct: 333 IKAELEQAKI---AIEQARRVG-DLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNK 388 Query: 138 ISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELER 197 ++ + + + P S E++ L+ +G + + + R Sbjct: 389 VTDAEIAEVLARWT---GIPVSRMMESEREKLLRMEQELHHRV-IGQNEAVDAVSNAIRR 444 Query: 198 AIQVL--CRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD-CTIYSLDIGSLL 254 + L R + L +G +GVGKT + + LA + D V D S L Sbjct: 445 SRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEFMEKHSVSRL 504 Query: 255 AGT--KYRGDFEKRFKALLKQLEQDTN-SILFIDEIHTIIGAGAASGGQVDAANLIKPLL 311 G Y G E L + + S++ +D + D N++ +L Sbjct: 505 VGAPPGYVGYEEG---GYLTEAVRRRPYSVILLDAV---------EKAHPDVFNILLQVL 552 Query: 312 SSGKI 316 G++ Sbjct: 553 DDGRL 557 Score = 31.3 bits (69), Expect = 1.6, Method: Composition-based stats. Identities = 56/337 (16%), Positives = 114/337 (33%), Gaps = 35/337 (10%) Query: 442 SQSDRDTLKNLGDRLKML--------VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLF 493 ++ R LK L V G+D+ I + ++ ++ PV Sbjct: 12 AEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQR-----RTKNNPV----L 62 Query: 494 AGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVG-FDQ--GGLLT 550 G GVGKT + L++ + + + + A Y G F++ G+L Sbjct: 63 IGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLN 122 Query: 551 DAVIKHPHAVLLLDEIE--------KAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLV 602 D + + +L +D + D N+L + G L D + Sbjct: 123 DLAKQEGNVILFIDALHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIE 182 Query: 603 MTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDN--IIWFDHLSTDVI-- 658 R ++ + +++ + +K+ + ++ + I+ LS I Sbjct: 183 KDAAL-ERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIAD 241 Query: 659 HQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLAN 718 Q+ DK I + + ++ E + L + + + + + + KK L Sbjct: 242 RQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKASDEASKKRL-- 299 Query: 719 ELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAE 755 ++L L D + L++E Q KAE Sbjct: 300 DMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAE 336 >3PXG-A nrPDB Length = 468 Score = 436 bits (1121), Expect = e-122, Method: Composition-based stats. Identities = 162/475 (34%), Positives = 258/475 (54%), Gaps = 55/475 (11%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELE 59 + + L +A A H + EH+LL L+ A +AL+A + +++E+E Sbjct: 6 FTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVE 65 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + I + E + T ++V++ ++ + G + V ++L+ + E E Sbjct: 66 SLIGR------GQEMSQTIHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGV 119 Query: 120 AAYLLRKHEVS----RLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTN 175 AA +L VS R V+ + T SS G+ N+ +++ + Sbjct: 120 AARVLNNLGVSLNKARQQVLQLLGSN-----ETGSSAAGTNSNANTPT-----LDSLARD 169 Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGD 235 L +A+ +DP+IGR KE++R I+VL RR KNNP+L+GE GVGKTAIAEGLA +I+ + Sbjct: 170 LTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNE 229 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGA 295 VPE++ D + +LD+ GTKYRG+FE R K ++ ++ Q N ILFID Sbjct: 230 VPEILRDKRVMTLDM-----GTKYRGEFEDRLKKVMDEIRQAGNIILFID---------- 274 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV 355 +DA+N++KP L+ G+++ IG+TT E+ EKD AL RRFQ I + +PS++E++ Sbjct: 275 ---AAIDASNILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESI 331 Query: 356 QIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS 415 QI+ GL+ +YEAHH V T A+ AAV+L+ +YI+DR LPDKAID+IDEAG++ RL + Sbjct: 332 QILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFT 391 Query: 416 ---------------KRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR 455 +++K V E A R E+ + + DT K+ ++ Sbjct: 392 TPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEK 446 Score = 31.7 bits (70), Expect = 1.4, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 84/236 (35%), Gaps = 36/236 (15%) Query: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRF 519 V G+ K I+ + E + ++ PV G GVGKT +++ L +++ Sbjct: 182 VIGRSKEIQRVIEVLSR-----RTKNNPV----LIGEPGVGKT----AIAEGLAQQIINN 228 Query: 520 DMSE-YMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILL 578 ++ E ++ ++ +G D+ + D + + + +L +D A D NIL Sbjct: 229 EVPEILRDKRVMTLDMGTKYRGEFEDRLKKVMDEIRQAGNIILFID----AAIDASNILK 284 Query: 579 QVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTP 638 + G L D + R + + D S ++ ++ + Sbjct: 285 PSLARGELQCIGATTLDEYRKYIEKDAAL-ERRFQPIQVDQPSVDESIQILQGLRDRY-- 341 Query: 639 EFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKG 694 E +R+ ++ D I V + + + +A + + E G Sbjct: 342 EAHHRVS-------ITDDAIEAAVKLSDRYISDRF--------LPDKAIDLIDEAG 382 >5VY8-A nrPDB Length = 908 Score = 423 bits (1087), Expect = e-118, Method: Composition-based stats. Identities = 156/500 (31%), Positives = 262/500 (52%), Gaps = 41/500 (8%) Query: 10 LNMAFARAREHRHEFMTVEHLLLALL------SNPSAREALEACSVDLVALRQELEAFIE 63 L +A A +H+H + H+L A + S P + +E D ++ + + Sbjct: 15 LTLAQKLASDHQHPQLQPIHILAAFIETPEDGSVPYLQNLIEKGRYDYDLFKKVVNRNLV 74 Query: 64 QTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYL 123 + PA E P+ + +VLQ A + + + ++L A+F++ Q + Sbjct: 75 RIPQQQPAPAE---ITPSYALGKVLQDAAKIQKQQKDSFIAQDHILFALFNDSSIQQIF- 130 Query: 124 LRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVG 183 + +++D+ T+ G+ N+ E + + ++ + AR G Sbjct: 131 ----KEAQVDIEAIKQQALELRGNTRIDSRGADTNTPL-----EYLSKYAIDMTEQARQG 181 Query: 184 GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC 243 +DP+IGRE+E+ I+VL RR K+NP L+GE G+GKTAI EG+A RI+ DVP ++ Sbjct: 182 KLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGA 241 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI-LFIDEIHTIIGAGAASGGQVD 302 ++SLD+ +L AG KY+GDFE+RFK +LK++E+ I LFIDEIH ++G G+ D Sbjct: 242 KLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMG-----NGKDD 296 Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLK 362 AAN++KP LS G+++VIG+TT E+ +I EKD A RRFQKI++ EPS+ +TV I+ GL+ Sbjct: 297 AANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVAILRGLQ 356 Query: 363 PKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA------RARLMPVSK 416 PKYE HH VR A+ A +LA +Y+ R LPD A+D++D + A ++ + Sbjct: 357 PKYEIHHGVRILDSALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAVARDSKPEELDS 416 Query: 417 RKKTVNVADIESVVARIARIPEKSVSQ----------SDRDTLKNLGDRLKMLVFGQDKA 466 +++ + + +E + + S ++ L+ L R G ++ Sbjct: 417 KERQLQLIQVEIKALERDEDADSTTKDRLKLARQKEASLQEELEPLRQRYNEEKHGHEEL 476 Query: 467 IEALTEAIKMARAGLGHEHK 486 +A + ++ L E + Sbjct: 477 TQAKKKLDELENKALDAERR 496 Score = 391 bits (1004), Expect = e-109, Method: Composition-based stats. Identities = 196/807 (24%), Positives = 347/807 (42%), Gaps = 114/807 (14%) Query: 10 LNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVL 69 L A ++ + F+ +H+L AL ++ S ++ + VD+ A++Q+ T Sbjct: 96 LQDAAKIQKQQKDSFIAQDHILFALFNDSSIQQIFKEAQVDIEAIKQQALELRGNTRID- 154 Query: 70 PASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA-AYLLRKHE 128 S P + + + V G E+E ++ +L + Sbjct: 155 --SRGADTNTPLEYLSKYAIDMTEQARQGKLDPVIG--------REEEIRSTIRVLAR-- 202 Query: 129 VSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGID-- 186 K P +PG + + + +++ + Q A++ +D Sbjct: 203 -------------RIKSNPCLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFSLDLA 249 Query: 187 ------PLIGREKELERAIQVLCRRRKNNPLLVGES-----GVGKTAIAEGLAWRIVQGD 235 G +E + + K +L + G GK A L + +G Sbjct: 250 ALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMGNGKDDAANILKPALSRGQ 309 Query: 236 VPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFI-------DEIH 288 + + A + + S++ G FE+RF+ + + E + I EIH Sbjct: 310 LKVIGA---TTNNEYRSIVEKD---GAFERRFQKI-EVAEPSVRQTVAILRGLQPKYEIH 362 Query: 289 TIIGAGAASGGQVDAANLIK----------PLLSSGKIRVIGSTTYQEFSNIFEKDRALA 338 G V AA L K L I G ++ S E D Sbjct: 363 H--GVRILDSALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAVARD-SKPEELDSK-E 418 Query: 339 RRFQKIDITEPSIE----------ETVQI-----------INGLKPKY--EAHHDVRYT- 374 R+ Q I + ++E + +++ + L+ +Y E H T Sbjct: 419 RQLQLIQVEIKALERDEDADSTTKDRLKLARQKEASLQEELEPLRQRYNEEKHGHEELTQ 478 Query: 375 -----AKAVRAAVELAVKY--INDRHLPDKAIDVIDEAGARARLMPVSKRKKT------- 420 + A++ +Y L AI I + + + ++ Sbjct: 479 AKKKLDELENKALDAERRYDTATAADLRYFAIPDIKKQIEKLEDQVAEEERRAGANSMIQ 538 Query: 421 --VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 V+ I AR+ IP K +S+S+ + L ++ L V GQ AI+A++ A++++R Sbjct: 539 NVVDSDTISETAARLTGIPVKKLSESENEKLIHMERDLSSEVVGQMDAIKAVSNAVRLSR 598 Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIG 535 +GL + +P SFLF G +G GKTE+ +++ L + ++R D SE E++ VS+L+G Sbjct: 599 SGLANPRQP-ASFLFLGLSGSGKTELAKKVAGFLFNDEDMMIRVDCSELSEKYAVSKLLG 657 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 GYVG+D+GG LT+ + P++VLL DE+EKAHPDV ++LQ++D+G +T G+ D Sbjct: 658 TTAGYVGYDEGGFLTNQLQYKPYSVLLFDEVEKAHPDVLTVMLQMLDDGRITSGQGKTID 717 Query: 596 FRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLST 655 N +++MT+N G + I + M +++ F PEF NR+ +I+ F+ LS Sbjct: 718 CSNCIVIMTSNLGAEFINSQQGSKIQESTKNLVMGAVRQHFRPEFLNRISSIVIFNKLSR 777 Query: 656 DVIHQVVDKFIVELQVQLDQ--KGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLK 713 IH++VD + E++ + +Q K L ++QEA+++LA+ GY MGARP+ R+IQ+ + Sbjct: 778 KAIHKIVDIRLKEIEERFEQNDKHYKLNLTQEAKDFLAKYGYSDDMGARPLNRLIQNEIL 837 Query: 714 KPLANELLFGSLVDGGQVTVALDKEKN 740 LA +L + D V V L K K+ Sbjct: 838 NKLALRILKNEIKDKETVNVVLKKGKS 864 Score = 29.0 bits (63), Expect = 7.1, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 74/227 (32%), Gaps = 26/227 (11%) Query: 376 KAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIAR 435 K ++ A ++ + D + I + + + + + + R Sbjct: 94 KVLQDAAKIQKQQ-KDSFIAQDHILFALFNDSSIQQIFKEAQVDIEAIKQQALELRGNTR 152 Query: 436 I---------PEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHK 486 I P + +S+ D + V G+++ I + +AR + Sbjct: 153 IDSRGADTNTPLEYLSKYAIDMTEQARQGKLDPVIGREEEIRSTIRV--LARRIKSNP-- 208 Query: 487 PVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVG-FDQ 545 G G+GKT + +++ + + + + + A Y G F++ Sbjct: 209 -----CLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFSLDLAALTAGAKYKGDFEE 263 Query: 546 --GGLLTDAVIKHPHAVLLLDEIE----KAHPDVFNILLQVMDNGTL 586 G+L + VL +DEI D NIL + G L Sbjct: 264 RFKGVLKEIEESKTLIVLFIDEIHMLMGNGKDDAANILKPALSRGQL 310 >4LJ8-A nrPDB Length = 339 Score = 412 bits (1059), Expect = e-115, Method: Composition-based stats. Identities = 148/321 (46%), Positives = 218/321 (67%), Gaps = 4/321 (1%) Query: 421 VNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG 480 V DI +V+R IP + + +R+ L L + L V GQD+AI A+ +AI+ ARAG Sbjct: 6 VTEEDIAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAG 65 Query: 481 LGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAP 537 L ++P+GSFLF GPTGVGKTE+ L+ L +++ DM+EYME+H VSRLIGAP Sbjct: 66 LKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIQIDMTEYMEKHAVSRLIGAP 125 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 PGYVG+++GG LT+AV + P++V+L DEIEKAHPDVFNILLQ++D+G LTD++GR DFR Sbjct: 126 PGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFR 185 Query: 598 NVVLVMTTNAGVRE-TERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTD 656 N V+++T+N G E G ++ + + +++ F PEF NRLD I+ F L+ + Sbjct: 186 NTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKE 245 Query: 657 VIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPL 716 I Q+V+ + L+ +L +K +SLE+++ A+++LAE+GYD GARP+ RVIQ L+ PL Sbjct: 246 QIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPL 305 Query: 717 ANELLFGSLVDGGQVTVALDK 737 A ++L G + +G +V V + Sbjct: 306 AQKILAGEVKEGDRVQVDVGP 326 Score = 42.1 bits (97), Expect = 8e-04, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 86/245 (35%), Gaps = 35/245 (14%) Query: 188 LIGREKELERAIQVLCR---------RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPE 238 ++G+++ + + R R + L +G +GVGKT +A+ LA + + Sbjct: 45 VVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAM 104 Query: 239 VMADCT-IYSLDIGSLLAGT--KYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGA 295 + D T S L G Y G E L + + + S++ DEI Sbjct: 105 IQIDMTEYMEKHAVSRLIGAPPGYVGYEEG--GQLTEAVRRRPYSVILFDEI-------- 154 Query: 296 ASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARR--FQKIDITEPSIEE 353 D N++ +L G++ T + + L + + P Sbjct: 155 -EKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERI 213 Query: 354 TVQIINGLKPKYEAHHDVR---------YTAKAVRAAVELAVKYINDRHLPDKAIDVIDE 404 ++ L+ + R T + +R VE+ + Y+ R L +K I + Sbjct: 214 RDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRAR-LAEKRISLELT 272 Query: 405 AGARA 409 A+ Sbjct: 273 EAAKD 277 >6ED3-A nrPDB Length = 848 Score = 411 bits (1056), Expect = e-115, Method: Composition-based stats. Identities = 214/805 (26%), Positives = 362/805 (44%), Gaps = 100/805 (12%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS-NPSAREALEACSVDLVALRQELEA 60 L++E ++ A A E E+++ EH+++ L + + + L ALR+ Sbjct: 83 LSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDSDVAKLLTGHGASPQALREAFVK 142 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANV----LVAIFSEQ 116 P E + Q+ + + V G + +V + S + Sbjct: 143 VRGSARVTSPEPEATY-----QALQKYSTDLTARAREGKLDPVIGRDNEIRRVVQVLSRR 197 Query: 117 ESQAAYLLRKHEVSRLDVVNFISH---------GTRKDEPTQSSDPGSQPNSEEQAGGEE 167 L+ + V + +V ++ R S+ + EE Sbjct: 198 TKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVALDLGSMVAGSKYRGEFEE 257 Query: 168 RMENFTTNLNQLAR-------------------VGGID------PLIGREK--------- 193 R++ ++ A G +D P++ R + Sbjct: 258 RLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIKPMLARGELRLVGATTL 317 Query: 194 -ELERAIQV---LCRRRKNNPLLVGESGVGKTA-IAEGLAWRIVQGDVPEVMADCTIYSL 248 E + I+ L RR + + VGE V T I GL R + + + Sbjct: 318 DEYRKHIEKDAALERRFQQ--VYVGEPSVEDTIGILRGLKDRYEVHHGVRITDSALVAAA 375 Query: 249 DIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI----LFIDEIHTIIGAGAASGGQVDAA 304 + ++ D K + + + I + IDE+ ++ +++ Sbjct: 376 TLSDRYITARFLPD--KAIDLVDEAASRLRMEIDSRPVEIDEVERLVRRL-----EIEEM 428 Query: 305 NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPK 364 L K + R+ + E ++ EK L R+Q + + ++I+ LK + Sbjct: 429 ALSKEEDEASAERL--AKLRSELADQKEKLAELTTRWQ-------NEKNAIEIVRDLKEQ 479 Query: 365 YEAHHDVRYTAKAVRAAVELA-VKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNV 423 EA A+ + A ++Y + K + +A AR ++M K+ V Sbjct: 480 LEALRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVML----KEEVGP 535 Query: 424 ADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGH 483 DI VV+ IP + + + L + D L V GQ A+ A+++A++ +RAG+ Sbjct: 536 DDIADVVSAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSD 595 Query: 484 EHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGY 540 ++P G+F+F GPTGVGKTE+ L+ L + ++R DMSEY E+HTV+RLIGAPPGY Sbjct: 596 PNRPTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGY 655 Query: 541 VGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVV 600 VG++ GG LT+AV + P+ V+L DEIEKAHPDVF++LLQV+D G LTD +GR DFRN + Sbjct: 656 VGYEAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTI 715 Query: 601 LVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 L++T+N G S G Q + ++ F PEF NRLD+++ F+ L+ + + + Sbjct: 716 LILTSNLG-------SGGSAEQ-----VLAAVRATFKPEFINRLDDVLIFEGLNPEELVR 763 Query: 661 VVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 720 +VD + +L +L Q+ + L+VS A+ WLA++G+D GARP+ R++Q + LA L Sbjct: 764 IVDIQLAQLGKRLAQRRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKML 823 Query: 721 LFGSLVDGGQVTVALDKEKNELTYG 745 L G + DG V V + + + L G Sbjct: 824 LAGQVHDGDTVPVNVSPDADSLILG 848 Score = 409 bits (1052), Expect = e-114, Method: Composition-based stats. Identities = 175/455 (38%), Positives = 267/455 (58%), Gaps = 25/455 (5%) Query: 22 HEFMTVEHLLLALLSNPS--AREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQ 79 + + HLL+ALL+ A LEA V+ +R E + +++ AS TQ Sbjct: 26 NPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATVRAETQRLLDRLPQATGAS-----TQ 80 Query: 80 PTLSFQRVLQRAVFHVQSSG--RNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNF 137 P LS + + ++ V+ +V+V + + +S A LL H S + Sbjct: 81 PQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLAT-GDSDVAKLLTGHGASPQALREA 139 Query: 138 ISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELER 197 + + + P E + ++ ++T+L AR G +DP+IGR+ E+ R Sbjct: 140 F---VKVRGSARVTSP-------EPEATYQALQKYSTDLTARAREGKLDPVIGRDNEIRR 189 Query: 198 AIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGT 257 +QVL RR KNNP+L+GE GVGKTAI EGLA RIV GDVPE + D TI +LD+GS++AG+ Sbjct: 190 VVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVALDLGSMVAGS 249 Query: 258 KYRGDFEKRFKALLKQLEQDTNSIL-FIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKI 316 KYRG+FE+R KA+L ++ I+ FIDE+HTI+GAGA G +DA N+IKP+L+ G++ Sbjct: 250 KYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIKPMLARGEL 309 Query: 317 RVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAK 376 R++G+TT E+ EKD AL RRFQ++ + EPS+E+T+ I+ GLK +YE HH VR T Sbjct: 310 RLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVHHGVRITDS 369 Query: 377 AVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARI 436 A+ AA L+ +YI R LPDKAID++DEA +R R+ S+ V + ++E +V R+ I Sbjct: 370 ALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSR---PVEIDEVERLVRRL-EI 425 Query: 437 PEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALT 471 E ++S+ + + +L+ + Q + + LT Sbjct: 426 EEMALSKEEDEASAERLAKLRSELADQKEKLAELT 460 >6D00-1 nrPDB Length = 883 Score = 407 bits (1046), Expect = e-114, Method: Composition-based stats. Identities = 154/429 (35%), Positives = 243/429 (56%), Gaps = 24/429 (5%) Query: 332 EKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHD-------VRYTAKAVRAAVEL 384 EKD A +R Q++ I+E + LK KYE+ + ++A E Sbjct: 429 EKDAASKQRLQEVRAEMARIQEE---LRPLKMKYESEKGRLDEIRNLSQRLDELKAKAED 485 Query: 385 AVKY--------INDRHLPD---KAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARI 433 A + I +PD + + E + V I VV+R Sbjct: 486 AERRYDLARAADIRYYAIPDLEKRLAQLQAEKSQADAERADGLLAEVVGPDQIMEVVSRW 545 Query: 434 ARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLF 493 IP ++ +S+++ L ++ + +K V GQD+AI+A+ +AI+++R GL + ++P+ SFLF Sbjct: 546 TGIPVSNLQRSEKEKLLHMEEYMKQHVVGQDEAIKAICDAIRLSRTGLQNRNRPLASFLF 605 Query: 494 AGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLT 550 GPTG GKT +L+ L + ++R DMSEYME+H VSRL+GAPPGY+G D+GG LT Sbjct: 606 LGPTGCGKTLCVKELAAFLFNDPGAIVRIDMSEYMEKHAVSRLVGAPPGYIGHDEGGQLT 665 Query: 551 DAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVR 610 +AV + P+ V+L DE+EKAH DV N+LLQ++D+G TD+ GR+ DF+N ++VMT+N G Sbjct: 666 EAVRRRPYTVVLFDEMEKAHKDVSNLLLQILDDGHCTDSKGRRVDFKNTIIVMTSNLGAD 725 Query: 611 ETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQ 670 E + Q + ++ F EF NR+D +I F+ L+ I ++VD + E+Q Sbjct: 726 LFELDEGDKVSQATKNAVLATARRHFANEFINRIDELIVFNRLTPSNIRKIVDVRLKEVQ 785 Query: 671 VQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQ 730 +LD+K ++L+V +A++ LA++G+D GARP+ R+IQ L L+ LL G + G Sbjct: 786 ERLDEKQITLDVDDKAKDLLAQQGFDPVYGARPLNRLIQHALLTQLSRLLLDGGVRPGEI 845 Query: 731 VTVALDKEK 739 V +D+E Sbjct: 846 AKVTVDQEG 854 Score = 402 bits (1032), Expect = e-112, Method: Composition-based stats. Identities = 182/500 (36%), Positives = 277/500 (55%), Gaps = 55/500 (11%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS--NPSAREALEACSVDLVALRQELE 59 + +LN A A E+ H + H+ + +L N R LE D+V++ + + Sbjct: 7 FTDKATETLNAAAKYAAENSHVQLHPSHVAVVMLDEENSLFRSILEKAGGDVVSIERGFK 66 Query: 60 AFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQ 119 + + P E P L+ ++L A H++ + ++++A+ ++ S Sbjct: 67 KIMVRQPSQDPPPTE-MGHSPELA--KLLHYAHEHMKKQRDLYIAQDHLILAL-ADLPSM 122 Query: 120 AAYLLRKHEVSRLDVVNFISH--GTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLN 177 A +L++ V++ + N ++H G R+ E + + E + + +L Sbjct: 123 AQ-VLKEGGVTKKSLENAVTHVRGNRRVESKSAEE------------AYEALSKYCIDLT 169 Query: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 +LA G +DP+IGR++ + R I+VL RR KNNP LVGE GVGKTAIAEGLA RIV+GD+P Sbjct: 170 ELAASGKLDPVIGRDEIISRVIRVLSRRTKNNPCLVGEPGVGKTAIAEGLANRIVKGDIP 229 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS 297 + +YSLDIGSLLAG KYRG+FE+R KA+LK+L++ +I+FIDEIHT++GAG + Sbjct: 230 SSLQ-KKVYSLDIGSLLAGAKYRGEFEERLKAVLKELKE-AQAIVFIDEIHTVLGAGKSE 287 Query: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357 G +DAANL+KP+L+ G++R IG+TT E+ EKD A RRFQ + + EPS+ +T+ I Sbjct: 288 GA-IDAANLLKPMLARGELRCIGATTLTEYRQYVEKDPAFERRFQLVMVEEPSVTDTISI 346 Query: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLM----- 412 + GLK +YE HH VR A+ AA +LA +YI R +PDKAID+IDEA A R+ Sbjct: 347 LRGLKERYETHHGVRIADAAIVAAAQLAARYITQRFMPDKAIDLIDEACANTRVQLDSQP 406 Query: 413 ------------------PVSKRKKTVNVADIESVVARIARI-----PEKSVSQSDR--- 446 + K K + ++ V A +ARI P K +S++ Sbjct: 407 EAIDKLERRHLQLEVEATALEKEKDAASKQRLQEVRAEMARIQEELRPLKMKYESEKGRL 466 Query: 447 DTLKNLGDRLKMLVFGQDKA 466 D ++NL RL L + A Sbjct: 467 DEIRNLSQRLDELKAKAEDA 486 Score = 41.7 bits (96), Expect = 0.001, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 86/245 (35%), Gaps = 27/245 (11%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFI 62 N ++L E RH + VE L + ++++ L+ ++ +++EL Sbjct: 397 NTRVQLDSQPEAIDKLERRHLQLEVEATALEKEKDAASKQRLQEVRAEMARIQEELRPLK 456 Query: 63 EQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAY 122 + +E R+ L + A + A++ + E + A Sbjct: 457 MKYESEKGRLDEIRNLSQRLDELK----AKAEDAERRYDLARAADIRYYAIPDLEKRLAQ 512 Query: 123 LLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQ----PNSEEQAGGEERMENFTTNLNQ 178 L + E S+ D P Q + S+ P S Q +E++ + + Q Sbjct: 513 L--QAEKSQADAERADGLLAEVVGPDQIMEVVSRWTGIPVSNLQRSEKEKLLHMEEYMKQ 570 Query: 179 LARVGGIDPLIGREKELERAIQV--LCR-------RRKNNPLLVGESGVGKTAIAEGLAW 229 ++G+++ ++ L R R + L +G +G GKT + LA Sbjct: 571 H--------VVGQDEAIKAICDAIRLSRTGLQNRNRPLASFLFLGPTGCGKTLCVKELAA 622 Query: 230 RIVQG 234 + Sbjct: 623 FLFND 627 Score = 37.9 bits (86), Expect = 0.019, Method: Composition-based stats. Identities = 51/259 (19%), Positives = 90/259 (34%), Gaps = 47/259 (18%) Query: 327 FSNIFEKDR----ALARRFQKIDITEPSIEETVQIINGLKPKYEAHHD---VRYTAKAVR 379 F +I EK ++ R F+KI + +PS + P E H + A Sbjct: 47 FRSILEKAGGDVVSIERGFKKIMVRQPSQDP---------PPTEMGHSPELAKLLHYAHE 97 Query: 380 AAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEK 439 + YI HL D+ + + + T + R R E Sbjct: 98 HMKKQRDLYIAQDHLILALADL------PSMAQVLKEGGVTKKSLENAVTHVRGNRRVES 151 Query: 440 SVSQSDRDTLKNLGDRLKML--------VFGQDKAIEALTEAIKMARAGLGHEHKPVGSF 491 ++ + L L L V G+D+ I + + ++ P Sbjct: 152 KSAEEAYEALSKYCIDLTELAASGKLDPVIGRDEIISRVIRVLSR-----RTKNNP---- 202 Query: 492 LFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIG---APPGYVG-FDQGG 547 G GVGKT +++ L +++ D+ +++ S IG A Y G F++ Sbjct: 203 CLVGEPGVGKT----AIAEGLANRIVKGDIPSSLQKKVYSLDIGSLLAGAKYRGEFEERL 258 Query: 548 LLTDAVIKHPHAVLLLDEI 566 +K A++ +DEI Sbjct: 259 KAVLKELKEAQAIVFIDEI 277 >1QVR-A nrPDB Length = 854 Score = 403 bits (1034), Expect = e-112, Method: Composition-based stats. Identities = 166/423 (39%), Positives = 253/423 (59%), Gaps = 21/423 (4%) Query: 332 EKDRALARRFQKIDITEPSIEETVQIING--------LKPKYEAHHDVRYTAKAVRAAVE 383 EKD R + I+ + E + + L+ EA H + VR +E Sbjct: 423 EKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQHRL----DEVRREIE 478 Query: 384 LAVKYINDRHLPD----KAIDVIDEAGARARLMPVSKR-KKTVNVADIESVVARIARIPE 438 LA + + + + + E A + + ++ + V DI +V+R IP Sbjct: 479 LAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEEDIAEIVSRWTGIPV 538 Query: 439 KSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTG 498 + + +R+ L L + L V GQD+AI A+ +AI+ ARAGL ++P+GSFLF GPTG Sbjct: 539 SKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTG 598 Query: 499 VGKTEVTVQLSKALGI---ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIK 555 VGKTE+ L+ L ++R DM+EYME+H VSRLIGAPPGYVG+++GG LT+AV + Sbjct: 599 VGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRR 658 Query: 556 HPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRE-TER 614 P++V+L DEIEKAHPDVFNILLQ++D+G LTD++GR DFRN V+++T+N G E Sbjct: 659 RPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEG 718 Query: 615 KSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLD 674 G ++ + + +++ F PEF NRLD I+ F L+ + I Q+V+ + L+ +L Sbjct: 719 LQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLA 778 Query: 675 QKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVA 734 +K +SLE+++ A+++LAE+GYD GARP+ RVIQ L+ PLA ++L G + +G +V V Sbjct: 779 EKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVD 838 Query: 735 LDK 737 + Sbjct: 839 VGP 841 Score = 351 bits (900), Expect = 7e-97, Method: Composition-based stats. Identities = 172/461 (37%), Positives = 251/461 (54%), Gaps = 29/461 (6%) Query: 3 NQELELSLNMAFARAREHRHEFMTVEHLLLALLSN--PSAREALEACSVDLVALRQELEA 60 Q +L A A+ +H+ + + HL LL + A LE D AL++ E Sbjct: 7 TQAAREALAQAQVLAQRMKHQAIDLPHLWAVLLKDERSLAWRLLEKAGADPKALKELQER 66 Query: 61 FIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120 + + V A + T L RA ++ V +++A+ Sbjct: 67 ELARLPKVEGAEVGQYLTS---RLSGALNRAEGLMEELKDRYVAVDTLVLALAEATPG-- 121 Query: 121 AYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA 180 L E + + T + E +S+ +E + +L +LA Sbjct: 122 ---LPGLEALKGALKELRGGRTVQTEHAEST--------------YNALEQYGIDLTRLA 164 Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 G +DP+IGR++E+ R IQ+L RR KNNP+L+GE GVGKTAI EGLA RIV+GDVPE + Sbjct: 165 AEGKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGL 224 Query: 241 ADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD-TNSILFIDEIHTIIGAGAASGG 299 I SL +GSLLAG KYRG+FE+R KA+++++ Q ILFIDE+HT++GAG A G Sbjct: 225 KGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGA 284 Query: 300 QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN 359 VDA N++KP L+ G++R+IG+TT E+ EKD AL RRFQ + + EP++EET+ I+ Sbjct: 285 -VDAGNMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVDEPTVEETISILR 342 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKK 419 GLK KYE HH VR + A+ AA L+ +YI +R LPDKAID+IDEA AR R M + + Sbjct: 343 GLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLR-MALESAPE 401 Query: 420 TVNVADIESVVARIARIPEKSVSQSD-RDTLKNLGDRLKML 459 ++ + + + I R K D ++ LK + + L Sbjct: 402 EIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKL 442 Score = 40.2 bits (92), Expect = 0.003, Method: Composition-based stats. Identities = 71/416 (17%), Positives = 140/416 (33%), Gaps = 51/416 (12%) Query: 17 AREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEER 76 A E + + +E L +P ++E L+A ++ L +E+ + + R Sbjct: 405 ALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLR 464 Query: 77 DTQPTLSFQR----VLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRL 132 + Q L R + +R +++ + + + E + EV+ Sbjct: 465 EAQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEE 524 Query: 133 DVVNFISHGT-----RKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDP 187 D+ +S T + E + + ++ G++ + + AR G DP Sbjct: 525 DIAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDP 584 Query: 188 LIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCT-IY 246 R + L +G +GVGKT +A+ LA + + + D T Sbjct: 585 ----------------NRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYM 628 Query: 247 SLDIGSLLAGT--KYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAA 304 S L G Y G E L + + + S++ DEI D Sbjct: 629 EKHAVSRLIGAPPGYVGYEEG--GQLTEAVRRRPYSVILFDEI---------EKAHPDVF 677 Query: 305 NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARR--FQKIDITEPSIEETVQIINGLK 362 N++ +L G++ T + + L + + P ++ L+ Sbjct: 678 NILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQ 737 Query: 363 PKYEAHHDVR---------YTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA 409 + R T + +R VE+ + Y+ R L +K I + A+ Sbjct: 738 QHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRAR-LAEKRISLELTEAAKD 792 >5D4W-A nrPDB Length = 926 Score = 383 bits (983), Expect = e-106, Method: Composition-based stats. Identities = 145/441 (32%), Positives = 232/441 (52%), Gaps = 37/441 (8%) Query: 332 EKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAH-------HDVRYTAKAVRAAVEL 384 EKD A R + ++EE + L+ KYE + + +A+R E Sbjct: 450 EKDEASKARLAQAKQDAQNVEEE---LRPLREKYERERQRGKAIQEAKMKLEALRVKAED 506 Query: 385 AVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK------------------KTVNVADI 426 A + + D I E A + + K V I Sbjct: 507 ASRMGDHSRAADLQYYAIPEQEAIIKRLEAEKAAADAALNANGADVGGSMITDVVGPDQI 566 Query: 427 ESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHK 486 +VAR IP + S+++ L ++ L +V GQ +A+++++ AI++ R+GL + ++ Sbjct: 567 NEIVARWTGIPVTRLKTSEKEKLLHMEQALSKIVVGQKEAVQSVSNAIRLQRSGLSNPNQ 626 Query: 487 PVGSFLFAGPTGVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGF 543 P SFLF GP+G GKT +T L++ L + ++RFDMSEY ERH++SR+IGAPPGYVG Sbjct: 627 P-PSFLFCGPSGTGKTLLTKALAEFLFDDPKSMIRFDMSEYQERHSLSRMIGAPPGYVGH 685 Query: 544 DQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVM 603 D GG LT+A+ + P ++LL D +EKA +V +LLQ+MD+G +TD GR D +N ++VM Sbjct: 686 DAGGQLTEALRRRPFSILLFDAVEKAAKEVLTVLLQLMDDGRITDGQGRVVDAKNCIVVM 745 Query: 604 TTNAGVRETERKS---IGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 T+N G R + G I M ++ F PEF NR+ +++ F+ L+ I + Sbjct: 746 TSNLGAEYLSRANNGKDGKIDPTTRELVMNTLRNYFLPEFLNRISSVVIFNRLTRREIRK 805 Query: 661 VVDKFIVELQVQL--DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLAN 718 +VD I E+Q +L + + V ++VS+EA++ L +GY GARP+ R+++ + LA Sbjct: 806 IVDLRIAEIQKRLTDNDRNVIIKVSEEAKDKLGAQGYSPVYGARPLQRLLEKEVLNRLAI 865 Query: 719 ELLFGSLVDGGQVTVALDKEK 739 +L G + +G V L K Sbjct: 866 LILRGQIREGEVAHVELVDGK 886 Score = 352 bits (903), Expect = 3e-97, Method: Composition-based stats. Identities = 156/466 (33%), Positives = 250/466 (53%), Gaps = 33/466 (7%) Query: 2 LNQELELSLNMAFARAREHRHEFMTVEHLLLALLS----------------NPSAREALE 45 + +L A A A +++H + HL +ALL + R+ +E Sbjct: 7 FTDRAKKALEDAMALAEQYQHLQLQPVHLAVALLDPTPDPSKDQSIAPGTTSTLFRQVVE 66 Query: 46 ACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTG 105 D A + L+ + + P ++ + VL++A + + + Sbjct: 67 RAHGDAQAFDRALKKKLVRLPSQDPPPDQ---VSMSAGCSNVLRKANELQKVQKDSYIAV 123 Query: 106 ANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGG 165 +++ A+ + Q A L++ + + ++ R + + E Sbjct: 124 DHLIAALAEDHAIQEA--LKEANIPKPKLIQDAIQAIR--GNKRVDSRNADTEQEN---- 175 Query: 166 EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 E + F ++ +AR G IDP+IGRE+E+ R I++L RR KNNP+L+GE GVGKT I E Sbjct: 176 -ENLSKFCIDMTAMAREGKIDPVIGREEEIRRVIRILSRRTKNNPVLIGEPGVGKTTIVE 234 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSIL-FI 284 GLA RIV DVP+ +A C + SLD+G+L+AG+KYRG+FE+R K +LK++++ +I+ F+ Sbjct: 235 GLAQRIVNADVPDNLAACKLLSLDVGALVAGSKYRGEFEERMKGVLKEIQESKETIILFV 294 Query: 285 DEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKI 344 D IH ++GAG++ G +DAANL+KP+L+ G++ IG+TT E+ EKD A RRFQ++ Sbjct: 295 DAIHLLMGAGSSGEGGMDAANLLKPMLARGQLHCIGATTLAEYRKYIEKDAAFERRFQQV 354 Query: 345 DITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDE 404 + EPSI ET+ I+ GLK KYE HH V A+ AA LA +Y+ R LPD A+D+IDE Sbjct: 355 LVKEPSISETISILRGLKEKYEVHHGVNIADAAIVAAANLAARYLTSRRLPDSAVDLIDE 414 Query: 405 AGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLK 450 A A R+ S+ + + D R +I ++S+ + K Sbjct: 415 AAAAVRVARESQPE----IIDSLERRLRQLKIEIHALSREKDEASK 456 Score = 32.5 bits (72), Expect = 0.76, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 70/200 (35%), Gaps = 28/200 (14%) Query: 322 TTYQEFSNIFEKD----RALARRFQKIDITEPSIE---ETVQIINGLKPKYEAHHDVRYT 374 TT F + E+ +A R +K + PS + + V + G ++++ Sbjct: 56 TTSTLFRQVVERAHGDAQAFDRALKKKLVRLPSQDPPPDQVSMSAGCSNVLRKANELQKV 115 Query: 375 AKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVS----KRKKTVNVADIESVV 430 K AV+ + + + H +A+ + + + ++ AD E Sbjct: 116 QKDSYIAVDHLIAALAEDHAIQEALKEANIPKPKLIQDAIQAIRGNKRVDSRNADTEQEN 175 Query: 431 ARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGS 490 +++ + + + V G+++ I + + ++ PV Sbjct: 176 ENLSKFCIDMTAMAREGKIDP--------VIGREEEIRRVIRILSR-----RTKNNPV-- 220 Query: 491 FLFAGPTGVGKTEVTVQLSK 510 G GVGKT + L++ Sbjct: 221 --LIGEPGVGKTTIVEGLAQ 238 >6AMN-A nrPDB Length = 349 Score = 362 bits (928), Expect = e-100, Method: Composition-based stats. Identities = 124/356 (34%), Positives = 200/356 (56%), Gaps = 25/356 (7%) Query: 10 LNMAFARAREHRHEFMTVEHLLLALL------SNPSAREALEACSVDLVALRQELEAFIE 63 L +A A +H+H + H+L A + S P + +E D ++ + + Sbjct: 12 LTLAQKLASDHQHPQLQPIHILAAFIETPEDGSVPYLQNLIEKGRYDYDLFKKVVNRNLV 71 Query: 64 QTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYL 123 + PA E P+ + +VLQ A + + + ++L A+F++ Q + Sbjct: 72 RIPQQQPAPAE---ITPSYALGKVLQDAAKIQKQQKDSFIAQDHILFALFNDSSIQQIF- 127 Query: 124 LRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVG 183 + +++D+ T+ G+ N+ E + + ++ + AR G Sbjct: 128 ----KEAQVDIEAIKQQALELRGNTRIDSRGADTNTPL-----EYLSKYAIDMTEQARQG 178 Query: 184 GIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC 243 +DP+IGRE+E+ I+VL RR K+NP L+GE G+GKTAI EG+A RI+ DVP ++ Sbjct: 179 KLDPVIGREEEIRSTIRVLARRIKSNPCLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGA 238 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSI-LFIDEIHTIIGAGAASGGQVD 302 ++SLD+ +L AG KY+GDFE+RFK +LK++E+ I LFIDEIH ++G G+ D Sbjct: 239 KLFSLDLAALTAGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMG-----NGKDD 293 Query: 303 AANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQII 358 AAN++KP LS G+++VIG+TT E+ +I EKD A RRFQKI++ EPS+ +TV I+ Sbjct: 294 AANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVAIL 349 Score = 29.8 bits (65), Expect = 5.1, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 74/227 (32%), Gaps = 26/227 (11%) Query: 376 KAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIAR 435 K ++ A ++ + D + I + + + + + + R Sbjct: 91 KVLQDAAKIQKQQ-KDSFIAQDHILFALFNDSSIQQIFKEAQVDIEAIKQQALELRGNTR 149 Query: 436 I---------PEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHK 486 I P + +S+ D + V G+++ I + +AR + Sbjct: 150 IDSRGADTNTPLEYLSKYAIDMTEQARQGKLDPVIGREEEIRSTIRV--LARRIKSNP-- 205 Query: 487 PVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVG-FDQ 545 G G+GKT + +++ + + + + + A Y G F++ Sbjct: 206 -----CLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFSLDLAALTAGAKYKGDFEE 260 Query: 546 --GGLLTDAVIKHPHAVLLLDEIE----KAHPDVFNILLQVMDNGTL 586 G+L + VL +DEI D NIL + G L Sbjct: 261 RFKGVLKEIEESKTLIVLFIDEIHMLMGNGKDDAANILKPALSRGQL 307 >6E11-1 nrPDB Length = 906 Score = 361 bits (927), Expect = e-100, Method: Composition-based stats. Identities = 134/433 (30%), Positives = 222/433 (51%), Gaps = 24/433 (5%) Query: 328 SNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVK 387 EK L + +++ IT ++ +I L E + Y+ K ++ ++K Sbjct: 475 KEFEEKKEQLKKYYEEYVITGERLKRKKEIEKKLNDLKELTQNYVYSNKEPPIELQNSLK 534 Query: 388 YINDRHLPDKAIDVIDEAGARARLMPVSKRK-KTVNVADIESVVARIARIPEKSVSQSDR 446 ++L ++ E A + V + + R + +P S+S Sbjct: 535 EAQQKYL-----ELYKETVAYVEAKTHNAMNVDAVYQEHVSYIYLRDSGMPLGSLSFESS 589 Query: 447 DTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTV 506 L + L + G + I++L++A+ A G+ KP+G+FLF GPTGVGKTE+ Sbjct: 590 KGALKLYNSLSKSIIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFLGPTGVGKTELAK 649 Query: 507 QLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLL 563 L+ L L+R +MSE+ E H+VS++ G+PPGYVGF G LT+AV + PH+V+L Sbjct: 650 TLAIELFNSKDNLIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQLTEAVREKPHSVVLF 709 Query: 564 DEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQD 623 DE+EKAH DVF +LLQ++ +G + DN+ R DF N +++MT+N G ++K D Sbjct: 710 DELEKAHADVFKVLLQILGDGYINDNHRRNIDFSNTIIIMTSNLGAELFKKKL--FFDAD 767 Query: 624 NS-----TDAMEEI--------KKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQ 670 NS ME++ KK+F PEF NR+D I F+ L+ +H++V +L+ Sbjct: 768 NSGTPEYKRVMEDVRLSLIKKCKKVFKPEFVNRIDKIGVFEPLNKKNLHKIVALRFKKLE 827 Query: 671 VQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQ 730 +L++K + + VS++A +++ ++ YD +GARP I+ + A L LVD Sbjct: 828 KRLEEKNIQVSVSEKAIDYIIDQSYDPELGARPTLIFIESVIMTKFAIMYLKKELVDDMD 887 Query: 731 VTVALDKEKNELT 743 V V + + L Sbjct: 888 VFVDYNSKAKNLV 900 Score = 330 bits (846), Expect = 1e-90, Method: Composition-based stats. Identities = 137/465 (29%), Positives = 240/465 (51%), Gaps = 29/465 (6%) Query: 10 LNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVL 69 LN A+ + H + H+L AL + + +V+ L++ ++ +EQT Sbjct: 45 LNAGKNIAKSYGHNKLKPIHILSALAKSDYGSTLFKENNVNAANLKEYIDIALEQTRAGA 104 Query: 70 PASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEV 129 P + + + + L A +V ++L + +++ + + + Sbjct: 105 PLDNKSK-IVNSAEVKETLALAEAAANKYKSPKVDVEHLLSGLSNDE--LVNEIFNEVYL 161 Query: 130 SRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLI 189 + + + K + ++ G +E F +N+N+ R G + + Sbjct: 162 TDEAIKAILKRKFEKTK-----------KDKDGKTGTLYIEQFGSNMNEKVRNGKLQGIY 210 Query: 190 GREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLD 249 GR++E+ I+ L R KN+P+LVG G GKT I EGL +RI +GDVP+ + T+ SL+ Sbjct: 211 GRDEEIRAIIESLLRYNKNSPVLVGNPGTGKTTIVEGLVYRIEKGDVPKELQGYTVISLN 270 Query: 250 IGSLLAGTKYRGDFEKRFKALLKQLEQDTN-SILFIDEIHTIIGAGAASGGQVDAANLIK 308 +GT YRG+FE R K ++K+L+ N ILF+DEIH ++GAG A GG DAANL+K Sbjct: 271 FRKFTSGTSYRGEFETRMKNIIKELKNKKNKIILFVDEIHLLLGAGKAEGG-TDAANLLK 329 Query: 309 PLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAH 368 P+LS G+I++IG+TT E+ E A RRF+KI + PS++ TV+I+ LK KYE Sbjct: 330 PVLSKGEIKLIGATTIAEYRKFIESCSAFERRFEKILVEPPSVDMTVKILRSLKSKYENF 389 Query: 369 HDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVA--DI 426 + + T KA+ AA +++ ++I DR+LPDKAID++++A + ++ +S + + ++V DI Sbjct: 390 YGINITDKALVAAAKISDRFIKDRYLPDKAIDLLNKACSFLQVQ-LSGKPRIIDVTERDI 448 Query: 427 ESVVARIARIPEK----------SVSQSDRDTLKNLGDRLKMLVF 461 E + I+ + + + + + + L + V Sbjct: 449 ERLSYEISTLEKDVDKVSKKKYNKLIKEFEEKKEQLKKYYEEYVI 493 Score = 34.4 bits (77), Expect = 0.17, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 84/255 (32%), Gaps = 26/255 (10%) Query: 51 LVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLV 110 L +E E E+ + EE T L ++ +++ + ++ +N V Sbjct: 470 YNKLIKEFE---EKKEQLKKYYEEYVITGERLKRKKEIEKKLNDLKELTQNYVYSNKEPP 526 Query: 111 AIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPT-----------QSSDPGSQPNS 159 +A + + V +H + S P + Sbjct: 527 IELQNSLKEAQQKYLELYKETVAYVEAKTHNAMNVDAVYQEHVSYIYLRDSGMPLGSLSF 586 Query: 160 EEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVL--CRRRKNNPLLVGESG 217 E G + + + ++ +G D + + +A + + L +G +G Sbjct: 587 ESSKGALKLYNSLSKSI-----IGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFLGPTG 641 Query: 218 VGKTAIAEGLAWRIVQG-DVPEVMADCTIYSLDIGSLLAGT--KYRGDFEKRFKALLKQL 274 VGKT +A+ LA + D + S + G+ Y G + L + + Sbjct: 642 VGKTELAKTLAIELFNSKDNLIRVNMSEFTEAHSVSKITGSPPGYVGFSDS--GQLTEAV 699 Query: 275 EQDTNSILFIDEIHT 289 + +S++ DE+ Sbjct: 700 REKPHSVVLFDELEK 714 >6EMW-B nrPDB Length = 225 Score = 311 bits (796), Expect = 8e-85, Method: Composition-based stats. Identities = 105/225 (46%), Positives = 154/225 (68%), Gaps = 11/225 (4%) Query: 438 EKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPT 497 +++++ + L +L D L V GQ A+ ++++A++ ARAGL +P+GSF+F GPT Sbjct: 1 LTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 60 Query: 498 GVGKTEVTVQLSKALGIE---LLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVI 554 GVGKTE+ L++++ + ++R DMSE+ME+H VSRL+GAPPGYVG D GG LT+ V Sbjct: 61 GVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVR 120 Query: 555 KHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER 614 + P++V+L DEIEKAHPDVFNILLQV+D+G LTD GR DFRN +++MT+N G +E + Sbjct: 121 RKPYSVILFDEIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD 180 Query: 615 K--------SIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFD 651 + S G ++ ++E+K F PEF NR+D+II F Sbjct: 181 QRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRVDDIIVFH 225 Score = 38.6 bits (88), Expect = 0.009, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 8/136 (5%) Query: 159 SEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVL--CRRRKNNPLLVGES 216 ++ E++ + L++ +G D + K + RA L +R + + +G + Sbjct: 2 TKINETESEKLLSLEDTLHERV-IGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPT 60 Query: 217 GVGKTAIAEGLAWRIVQGDVPEVMAD-CTIYSLDIGSLLAGT--KYRGDFEKRFKALLKQ 273 GVGKT +A LA + D + D S L G Y G + L ++ Sbjct: 61 GVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDG--GQLTEK 118 Query: 274 LEQDTNSILFIDEIHT 289 + + S++ DEI Sbjct: 119 VRRKPYSVILFDEIEK 134 >4HSE-A nrPDB Length = 397 Score = 309 bits (792), Expect = 2e-84, Method: Composition-based stats. Identities = 146/308 (47%), Positives = 203/308 (65%), Gaps = 5/308 (1%) Query: 154 GSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLV 213 GS +E +E + +L +LA G +DP+IGR++E+ R IQ+L RR KNNP+L+ Sbjct: 1 GSHMQTEHAESTYNALEQYGIDLTRLAAEGKLDPVIGRDEEIRRVIQILLRRTKNNPVLI 60 Query: 214 GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ 273 GE GVGKTAI EGLA RIV+GDVPE + I SL +GSLLAG KYRG+FE+R KA++++ Sbjct: 61 GEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQE 120 Query: 274 LEQD-TNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFE 332 + Q ILFIDE+HT++GAG A G VDA N++KP L+ G++R+IG+TT E+ E Sbjct: 121 VVQSQGEVILFIDELHTVVGAGKAEGA-VDAGNMLKPALARGELRLIGATTLDEYRE-IE 178 Query: 333 KDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDR 392 KD AL RRFQ + + EP++EET+ I+ GLK KYE HH VR + A+ AA L+ +YI +R Sbjct: 179 KDPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITER 238 Query: 393 HLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSD-RDTLKN 451 LPDKAID+IDEA AR R M + + ++ + + + I R K D ++ LK Sbjct: 239 RLPDKAIDLIDEAAARLR-MALESAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKA 297 Query: 452 LGDRLKML 459 + + L Sbjct: 298 IEAEIAKL 305 >6MAT-A nrPDB Length = 813 Score = 308 bits (788), Expect = 7e-84, Method: Composition-based stats. Identities = 113/508 (22%), Positives = 190/508 (37%), Gaps = 116/508 (22%) Query: 147 PTQSSD--PGSQPNSEEQAGGEERMENFTTNLNQLARVGGID------------PLIGRE 192 P S+D P +P +++ + ++ + + G+D PL G E Sbjct: 167 PASSTDRQPNGEPRPKKRKAAPKEIDRTPPTKVSILDIAGVDDTLQRLLKEVWFPLRGGE 226 Query: 193 KELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGS 252 A + + R N LL G SG GKT +A +A I +P + S Sbjct: 227 -----ACEKMGYRYDNGVLLHGPSGCGKTTLAHAIAGSIGVAFIP----------VSAPS 271 Query: 253 LLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLS 312 ++ GT G+ EK + + + + ++F+D+I I G ++ +++ + + + Sbjct: 272 VIGGTS--GESEKNIRDVFDEAIRLAPCLIFLDQIDAIAGRRESANKGMESRIVAEIMNG 329 Query: 313 SGKIR----------VIGSTTYQEFSNIFEKDRALARRFQ-KIDITEPSIEETVQIINGL 361 +IR V+ +T EF D A+ RRF +ID+ PS QI+ L Sbjct: 330 MDRIRQNTPLGKNVVVLAATNRPEF-----LDPAIRRRFSVEIDMGMPSERAREQILRSL 384 Query: 362 ------------------KPKYEAHHDVRYTAKAV-----RAAVELAVKYINDRHLPDKA 398 P Y D++Y KA +A ++ + +H D Sbjct: 385 TRDLSLADDINFKELAKMTPGY-VGSDLQYVVKAAVSESFQANIDSLLAQARAKHPADHL 443 Query: 399 IDVI--------------DEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQS 444 +V +E + + + + +K V++ S + IP+ + S Sbjct: 444 ANVSQPQRDWLLLEAHRDEEVSWPSTKITMEQFRKAVSLVQPASKREGFSTIPDTTWSHV 503 Query: 445 DRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEV 504 L+++ +L+M + G K E T R G+ KP L GP G GKT V Sbjct: 504 G--ALEDVRKKLEMSIIGPIKNPELFT------RVGI----KPAAGILLWGPPGCGKTLV 551 Query: 505 TVQLSK--------ALGIELLR--FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVI 554 ++ G ELL SE R SR + P + FDQ DA++ Sbjct: 552 AKAVANESKANFISIKGPELLNKYVGESERAVRQLFSRAKSSAPCILFFDQ----MDALV 607 Query: 555 KHPHAVLLLDEIEKAHPDVFNILLQVMD 582 D + A V N LL +D Sbjct: 608 PRRD-----DSLSDASARVVNTLLTELD 630 Score = 101 bits (251), Expect = 1e-21, Method: Composition-based stats. Identities = 60/300 (20%), Positives = 103/300 (34%), Gaps = 54/300 (18%) Query: 205 RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFE 264 + LL G G GKT +A+ +A + S+ LL KY G+ E Sbjct: 533 KPAAGILLWGPPGCGKTLVAKAVANE----------SKANFISIKGPELL--NKYVGESE 580 Query: 265 KRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANL------IKPLLSSGKIRV 318 + + L + + ILF D++ ++ S A + + + I V Sbjct: 581 RAVRQLFSRAKSSAPCILFFDQMDALVPRRDDSLSDASARVVNTLLTELDGVGDRSGIYV 640 Query: 319 IGSTTYQEFSNIFEKDRALAR--RF-QKIDITEPSIEETVQIINGL---------KPKYE 366 IG+T + D A+ R R I + PS E+ V+I+ L K + Sbjct: 641 IGATNRPDM-----IDEAIRRPGRLGTSIYVGLPSAEDRVKILKTLYRNTVKAPKKREGT 695 Query: 367 AHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADI 426 DV T AA E + D L A+D+ R + AD+ Sbjct: 696 NGEDVDMTD----AAAEQQHQGTTDADLEKVALDL---------------RCTGFSGADL 736 Query: 427 ESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHK 486 +++ A+ + V + K G + +E +A+ + + K Sbjct: 737 GNLMQAAAQACLERVYTQRQQKRKEGGSVAEEEEIEPVITMEDWEKALNEVKPSVKDPEK 796 >1JBK-A nrPDB Length = 195 Score = 266 bits (679), Expect = 3e-71, Method: Composition-based stats. Identities = 98/194 (50%), Positives = 142/194 (73%), Gaps = 2/194 (1%) Query: 167 ERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEG 226 + ++ +T +L + A G +DP+IGR++E+ R IQVL RR KNNP+L+GE GVGKTAI EG Sbjct: 3 QALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG 62 Query: 227 LAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALL-KQLEQDTNSILFID 285 LA RI+ G+VPE + + +LD+G+L+AG KYRG+FE+R K +L +Q+ N ILFID Sbjct: 63 LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFID 122 Query: 286 EIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKID 345 E+HT++GAG A G +DA N++KP L+ G++ +G+TT E+ EKD AL RRFQK+ Sbjct: 123 ELHTMVGAGKADGA-MDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVF 181 Query: 346 ITEPSIEETVQIIN 359 + EPS+E+T+ I+ Sbjct: 182 VAEPSVEDTIAILR 195 >6EMW-E nrPDB Length = 181 Score = 251 bits (641), Expect = 8e-67, Method: Composition-based stats. Identities = 94/181 (51%), Positives = 137/181 (75%), Gaps = 1/181 (0%) Query: 169 MENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLA 228 +++ +L +A+ G +DP+IGR+KE+ R I+VL RR KNNP+L+GE GVGKTAIAEGLA Sbjct: 2 LDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLA 61 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIH 288 IV +VPE + D + SLD+G+++AGTKYRG+FE+R K ++++++Q N ILFIDE+H Sbjct: 62 QAIVNNEVPETLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGNVILFIDELH 121 Query: 289 TIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE 348 T++GAG A G +DA+N++KP L+ G+++ IG+TT E+ EKD AL RRFQ + + E Sbjct: 122 TLVGAGGAEGA-IDASNILKPALARGELQCIGATTLDEYRKNIEKDAALERRFQPVQVDE 180 Query: 349 P 349 P Sbjct: 181 P 181 Score = 30.6 bits (67), Expect = 2.6, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 11/109 (10%) Query: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRF 519 V G+DK I + E + ++ PV G GVGKT + L++A+ + Sbjct: 21 VIGRDKEITRVIEVLSR-----RTKNNPV----LIGEPGVGKTAIAEGLAQAIVNNEVPE 71 Query: 520 DMSEYMERHTVSRLIGAPPGYVG--FDQGGLLTDAVIKHPHAVLLLDEI 566 + + + A Y G ++ + + + + + +L +DE+ Sbjct: 72 TLKDKRVMSLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGNVILFIDEL 120 >2P65-A nrPDB Length = 187 Score = 248 bits (633), Expect = 7e-66, Method: Composition-based stats. Identities = 99/187 (52%), Positives = 143/187 (76%), Gaps = 1/187 (0%) Query: 165 GEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIA 224 G + +E ++ +L LAR G +DP+IGR+ E+ RAIQ+L RR KNNP+L+G+ GVGKTAI Sbjct: 1 GYQALEKYSRDLTALARAGKLDPVIGRDTEIRRAIQILSRRTKNNPILLGDPGVGKTAIV 60 Query: 225 EGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-DTNSILF 283 EGLA +IVQGDVP+ + + SLD+ SL+AG KYRGDFE+R K++LK+++ + ++F Sbjct: 61 EGLAIKIVQGDVPDSLKGRKLVSLDLSSLIAGAKYRGDFEERLKSILKEVQDAEGQVVMF 120 Query: 284 IDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 IDEIHT++GAGA + G +DA N++KP+L+ G++R IG+TT E+ EKD+AL RRFQ+ Sbjct: 121 IDEIHTVVGAGAVAEGALDAGNILKPMLARGELRCIGATTVSEYRQFIEKDKALERRFQQ 180 Query: 344 IDITEPS 350 I + +PS Sbjct: 181 ILVEQPS 187 >5W0T-A nrPDB Length = 304 Score = 190 bits (481), Expect = 3e-48, Method: Composition-based stats. Identities = 66/276 (23%), Positives = 112/276 (40%), Gaps = 50/276 (18%) Query: 181 RVGGIDPLIGREKELERAIQVLCRRRKNNPLL--------VGESGVGKTAIAEGLAWRIV 232 +GG+DPLI E ++ N+PLL G G GKT +A+ LA Sbjct: 43 DIGGLDPLISDLHESVIYPLMMPEVYSNSPLLQAPSGVLLYGPPGCGKTMLAKALAKE-- 100 Query: 233 QGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIG 292 + S+ + S++ K+ G+ K A+ + I+FIDEI + + Sbjct: 101 --------SGANFISIRMSSIM--DKWYGESNKIVDAMFSLANKLQPCIIFIDEIDSFLR 150 Query: 293 AGAASGGQVDAA------NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK-ID 345 +++ +V A L LL++G++ +IG+T I + D A RR K Sbjct: 151 ERSSTDHEVTATLKAEFMTLWDGLLNNGRVMIIGATN-----RINDIDDAFLRRLPKRFL 205 Query: 346 ITEPSIEETVQIINGLKPKY---EAHHDVRYTAKAV-------------RAAVELAVKYI 389 ++ P ++ +I++ L E D++ A AA++ A +YI Sbjct: 206 VSLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDLKELCREAALDAAKEYI 265 Query: 390 ND-RHLPDKA-IDVIDEAGARARLMPVSKRKKTVNV 423 R L D IDV D + + R + + V Sbjct: 266 KQKRQLIDSGTIDVNDTSSLKIRPLKTKDFTSGLEV 301 Score = 52.5 bits (124), Expect = 7e-07, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 23/153 (15%) Query: 407 ARARLMPVSKRKKTVNVADIE----SVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFG 462 A + + KR + ++ ++++ I E +++ D L L L V Sbjct: 1 ASLQWEKLVKRSPALAEVTLDAYERTILSSIVTPDEINITFQDIGGLDPLISDLHESVIY 60 Query: 463 QDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMS 522 E + + + + L GP G GKT + L+K G + MS Sbjct: 61 PLMMPEVYSNSPLL---------QAPSGVLLYGPPGCGKTMLAKALAKESGANFISIRMS 111 Query: 523 EYMERH--TVSRLIGAP--------PGYVGFDQ 545 M++ ++++ A P + D+ Sbjct: 112 SIMDKWYGESNKIVDAMFSLANKLQPCIIFIDE 144 >5C18-A nrPDB Length = 785 Score = 157 bits (397), Expect = 2e-38, Method: Composition-based stats. Identities = 108/636 (16%), Positives = 215/636 (33%), Gaps = 102/636 (16%) Query: 156 QPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAI-------QVLCRRRKN 208 + ++ EE + + +GG + + KE+ + + + Sbjct: 184 EGEPIKREDEEESLNEVGYD-----DIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 238 Query: 209 NPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFK 268 LL G G GKT IA +A + ++ ++ +K G+ E + Sbjct: 239 GILLYGPPGTGKTLIARAVANE----------TGAFFFLINGPEIM--SKLAGESESNLR 286 Query: 269 ALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAA------NLIKPLLSSGKIRVIGST 322 ++ E++ +I+FIDE+ I + G+V+ L+ L + V+ +T Sbjct: 287 KAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAAT 346 Query: 323 TYQEFSNIFEKDRALAR--RFQK-IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVR 379 D AL R RF + +DI P ++I+ + DV A Sbjct: 347 NRPNS-----IDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANE 401 Query: 380 A-----------AVELAVKYINDR-HLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIE 427 E A++ I + L D + ID + + + + ++ ++ Sbjct: 402 THGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS 461 Query: 428 SVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKP 487 ++ + +P+ + L+++ L+ LV + + L P Sbjct: 462 ALRETVVEVPQVTWEDIG--GLEDVKRELQELVQYPVEHPDKF----------LKFGMTP 509 Query: 488 VGSFLFAGPTGVGKTEVTVQLSK--------ALGIELLR--FDMSEYMERHTVSRLIGAP 537 LF GP G GKT + ++ G ELL F SE R + A Sbjct: 510 SKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAA 569 Query: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597 P + FD+ + A + A V N +L MD + + Sbjct: 570 PCVLFFDELDSIAKARGGNIGDG------GGAADRVINQILTEMDGMSTK---------K 614 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDV 657 NV ++ TN + + ++++ I P+ ++R+ I +L Sbjct: 615 NVFIIGATN--------RPDIIDPAILRPGRLDQLIYIPLPDEKSRV--AILKANLRKSP 664 Query: 658 IHQVVDK-FIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPL 716 + + VD F+ ++ ++ E+ Q A + + + RP R Sbjct: 665 VAKDVDLEFLAKMTNGFSGADLT-EICQRACKLAIRESIESEI--RPEIRRDHFEEAMRF 721 Query: 717 ANE-LLFGSLVDGGQVTVALDKEKNELTYGFQSAQK 751 A + + L + + ++ F S + Sbjct: 722 ARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQ 757 Score = 101 bits (252), Expect = 9e-22, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 109/365 (29%), Gaps = 56/365 (15%) Query: 30 LLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQ 89 ++ A S AL +E++ I E + + + Sbjct: 342 VMAATNRPNSIDPALRRFG----RFDREVDIGI---PDATGRLEILQIHTKNMKLADDVD 394 Query: 90 RAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQ 149 V + V L A+ SE QA ++D+++ + Sbjct: 395 L--EQVANETHGHVGAD--LAALCSEAALQAIR-------KKMDLIDLEDETIDAEVMNS 443 Query: 150 SSDPGSQPNSEEQAGGEERMENFTTNLNQLA--RVGGIDPLIGREKELERAI-------Q 200 + + + Q+ +GG++ + +EL + Sbjct: 444 LAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFL 503 Query: 201 VLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYR 260 L G G GKT +A+ +A S+ LL T + Sbjct: 504 KFGMTPSKGVLFYGPPGCGKTLLAKAIANEC----------QANFISIKGPELL--TMWF 551 Query: 261 GDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAA---------NLIKPLL 311 G+ E + + + Q +LF DE+ +I A + G A + + Sbjct: 552 GESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS 611 Query: 312 SSGKIRVIGSTTYQEFSNIFEKDRALAR--RF-QKIDITEPSIEETVQIINGLKPKYEAH 368 + + +IG+T + D A+ R R Q I I P + V I+ K Sbjct: 612 TKKNVFIIGATNRPDI-----IDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVA 666 Query: 369 HDVRY 373 DV Sbjct: 667 KDVDL 671 >6MCK-A nrPDB Length = 606 Score = 155 bits (391), Expect = 7e-38, Method: Composition-based stats. Identities = 80/409 (19%), Positives = 143/409 (34%), Gaps = 66/409 (16%) Query: 205 RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFE 264 + LL G G GKT IA +A + ++ ++ +K G+ E Sbjct: 28 KPPRGILLYGPPGTGKTLIARAVANE----------TGAFFFLINGPEIM--SKLAGESE 75 Query: 265 KRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAA------NLIKPLLSSGKIRV 318 + ++ E++ +I+FIDE+ I + G+V+ L+ L + V Sbjct: 76 SNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIV 135 Query: 319 IGSTTYQEFSNIFEKDRALAR--RFQK-IDITEPSIEETVQIINGLKPKYEAHHDVRYTA 375 + +T D AL R RF + +DI P ++I+ + DV Sbjct: 136 MAATNRPNS-----IDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQ 190 Query: 376 KAVRA-----------AVELAVKYINDR-HLPDKAIDVIDEAGARARLMPVSKRKKTVNV 423 A E A++ I + L D + ID + + + + ++ Sbjct: 191 VANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQ 250 Query: 424 ADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGH 483 ++ ++ + +P+ + L+++ L+ LV + + L Sbjct: 251 SNPSALRETVVEVPQVTWEDIG--GLEDVKRELQELVQYPVEHPDKF----------LKF 298 Query: 484 EHKPVGSFLFAGPTGVGKTEVTVQLSK--------ALGIELLR--FDMSEYMERHTVSRL 533 P LF GP G GKT + ++ G ELL F SE R + Sbjct: 299 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 358 Query: 534 IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD 582 A P + FD+ + A + A V N +L MD Sbjct: 359 RQAAPCVLFFDELDSIAKARGGNIGDG------GGAADRVINQILTEMD 401 Score = 101 bits (250), Expect = 2e-21, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 109/365 (29%), Gaps = 56/365 (15%) Query: 30 LLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQ 89 ++ A S AL +E++ I E + + + Sbjct: 135 VMAATNRPNSIDPALRRFG----RFDREVDIGI---PDATGRLEILQIHTKNMKLADDVD 187 Query: 90 RAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQ 149 V + V L A+ SE QA ++D+++ + Sbjct: 188 L--EQVANETHGHVGAD--LAALCSEAALQAIR-------KKMDLIDLEDETIDAEVMNS 236 Query: 150 SSDPGSQPNSEEQAGGEERMENFTTNLNQLA--RVGGIDPLIGREKELERAI-------Q 200 + + + Q+ +GG++ + +EL + Sbjct: 237 LAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFL 296 Query: 201 VLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYR 260 L G G GKT +A+ +A S+ LL T + Sbjct: 297 KFGMTPSKGVLFYGPPGCGKTLLAKAIANEC----------QANFISIKGPELL--TMWF 344 Query: 261 GDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAA---------NLIKPLL 311 G+ E + + + Q +LF DE+ +I A + G A + + Sbjct: 345 GESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS 404 Query: 312 SSGKIRVIGSTTYQEFSNIFEKDRALAR--RF-QKIDITEPSIEETVQIINGLKPKYEAH 368 + + +IG+T + D A+ R R Q I I P + V I+ K Sbjct: 405 TKKNVFIIGATNRPDI-----IDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVA 459 Query: 369 HDVRY 373 DV Sbjct: 460 KDVDL 464 >6CHS-H nrPDB Length = 819 Score = 154 bits (389), Expect = 1e-37, Method: Composition-based stats. Identities = 83/410 (20%), Positives = 142/410 (34%), Gaps = 67/410 (16%) Query: 205 RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFE 264 + LL G G GKT +A +A + ++ ++ +K G+ E Sbjct: 252 KPPRGVLLYGPPGTGKTLMARAVANE----------TGAFFFLINGPEIM--SKMAGESE 299 Query: 265 KRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAA------NLIKPLLSSGKIRV 318 + ++ E+++ +I+FIDEI +I + G+V+ L+ + + + V Sbjct: 300 SNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSNVVV 359 Query: 319 IGSTTYQEFSNIFEKDRALAR--RFQK-IDITEPSIEETVQIINGLKPKYEAHHDVRYTA 375 + +T D AL R RF + +DI P ++I+ + DV Sbjct: 360 MAATNRPNS-----IDPALRRFGRFDREVDIGIPDPTGRLEILQIHTKNMKLADDVDLEQ 414 Query: 376 KAVRA-----------AVELAVKYINDR-HLPDKAIDVIDEAGARARLMPVSKRKKTVNV 423 A E A++ I ++ L D D ID + + + + + V Sbjct: 415 IAAETHGYVGSDLAALCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMDNFRYALGV 474 Query: 424 ADIESVVA-RIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG 482 ++ ++ + +P L+ + LK V E L Sbjct: 475 SNPSALREVAVVEVPNVRWEDIG--GLEQVKQELKEQVQYPVDHPEKF----------LK 522 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSK--------ALGIELLR--FDMSEYMERHTVSR 532 P LF GP G GKT + ++ G ELL F SE R + Sbjct: 523 FGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDK 582 Query: 533 LIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD 582 A P V D+ L ++ + A V N LL MD Sbjct: 583 ARAAAPCVVFLDE---LDSIAKARGGSI---GDAGGASDRVVNQLLTEMD 626 Score = 110 bits (275), Expect = 2e-24, Method: Composition-based stats. Identities = 57/307 (18%), Positives = 100/307 (32%), Gaps = 40/307 (13%) Query: 181 RVGGIDPLIGREKELERAIQVLCRR-------RKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 +GG++ + KE + + L G G GKT +A+ +A Sbjct: 495 DIGGLEQVKQELKEQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAA 554 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGA 293 + + + S+ + G+ E + + + ++F+DE+ +I A Sbjct: 555 NFI--SVKGPELLSM----------WFGESESNIRDIFDKARAAAPCVVFLDELDSIAKA 602 Query: 294 GAASGGQVDAA---------NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR--RF- 341 S G A + + S + VIG+T E + D AL R R Sbjct: 603 RGGSIGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPE-----QLDPALCRPGRLD 657 Query: 342 QKIDITEPSIEETVQIINGLKPKYEAHHDVR--YTAKAVRAAVELAVKYINDRHLPDKAI 399 Q I + P + I+ K DV Y A + +I R K Sbjct: 658 QLIYVPLPDEAGRLSILKAQLRKTPVSKDVDLAYIASKTHGFSGADLAFITQR--AVKLA 715 Query: 400 DVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKML 459 A R + VN+ D E V + + + + R ++ ++ R Sbjct: 716 IKESIAAEIERQKAREAAGEDVNMEDDEDPVPELTKRHFEEAMRDARRSVSDVEIRRYEA 775 Query: 460 VFGQDKA 466 Q K Sbjct: 776 FAQQMKN 782 >5VC7-A nrPDB Length = 564 Score = 151 bits (381), Expect = 1e-36, Method: Composition-based stats. Identities = 88/444 (19%), Positives = 155/444 (34%), Gaps = 79/444 (17%) Query: 181 RVGGIDPLIGREKELERAI-------QVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 +GG+ +G+ +E+ + L +L G G GKT IA +A Sbjct: 10 DIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVANE--- 66 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGA 293 + S++ ++ +KY G E++ + + + E+ SI+FIDEI +I Sbjct: 67 -------SGANFLSINGPEIM--SKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPK 117 Query: 294 GAASGGQVDAA------NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR--RFQK-I 344 G+V+ L+ + G + VIG+T I D AL R RF + I Sbjct: 118 REEVQGEVERRVVAQLLTLMDGMKERGHVIVIGATN-----RIDAIDPALRRPGRFDREI 172 Query: 345 DITEPSIEETVQIIN--------GLKPKYE-------AHHDVRYTAKAVRAAVELAVKYI 389 +I P +I+ G+ + + A + + + A V + Sbjct: 173 EIGVPDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNA 232 Query: 390 NDRHLPDKAIDV-IDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDT 448 R+LP+ +D I ++ K + + S+ + +P Sbjct: 233 LRRYLPEIDLDKPIPTEILEKMVVTEDDFKNALKSIEPSSLREVMVEVPNVHWDDIG--G 290 Query: 449 LKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL 508 L+++ +K V + R G+ +P FL GP GVGKT + + Sbjct: 291 LEDVKREIKETVELPLLKPDVF------KRLGI----RPSKGFLLYGPPGVGKTLLAKAV 340 Query: 509 S--------KALGIELLR--FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPH 558 + G E+L SE R + P V D+ D++ Sbjct: 341 ATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDE----IDSIAPRRG 396 Query: 559 AVLLLDEIEKAHPDVFNILLQVMD 582 + N LL +D Sbjct: 397 TT----SDSGVTERIVNQLLTSLD 416 Score = 112 bits (279), Expect = 7e-25, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 104/297 (35%), Gaps = 54/297 (18%) Query: 181 RVGGIDPLIGREKELERAIQV-------LCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 +GG++ + KE + L R LL G GVGKT +A+ +A Sbjct: 287 DIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATE--- 343 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGA 293 ++ S+ +L +K+ G+ EK + + K+ +Q +I+F+DEI +I Sbjct: 344 -------SNANFISIKGPEVL--SKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPR 394 Query: 294 GAASGGQVDAANLIKPLLSS-------GKIRVIGSTTYQEFSNIFEKDRALAR--RFQK- 343 + ++ LL+S + VIG+T + D AL R RF K Sbjct: 395 RGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNRPDI-----MDPALLRAGRFDKL 449 Query: 344 IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVID 403 I I P E + I+ DV I R D+ + Sbjct: 450 IYIPPPDKEARLSILKVHTKNMPLAPDVDLND-------------IAQRTEGYVGADLEN 496 Query: 404 EAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLV 460 A + + +V+ + A K++ S + + L + Sbjct: 497 -LCREAGMNAYRENPDATSVSQKNFLDA------LKTIRPSVDEEVIKFYRTLSETM 546 Score = 48.3 bits (113), Expect = 1e-05, Method: Composition-based stats. Identities = 47/275 (17%), Positives = 83/275 (30%), Gaps = 70/275 (25%) Query: 436 IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAG 495 + +S D L +++ ++ K E R G+ + G Sbjct: 1 MEVSRISYEDIGGLSEQLGKIREMIELPLKHPELF------ERLGITPPK----GVILYG 50 Query: 496 PTGVGKTEVTVQLSKALGIELLRFDMSEYMERH----------TVSRLIGAPPGYVGFDQ 545 P G GKT + ++ G L + E M ++ S+ P + D+ Sbjct: 51 PPGTGKTLIARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDE 110 Query: 546 GGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTT 605 D++ V E+E+ V LL +MD Sbjct: 111 ----IDSIAPKREEVQ--GEVER---RVVAQLLTLMDG---------------------- 139 Query: 606 NAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKF 665 ER + +I N DA++ + P +R I D I + Sbjct: 140 -----MKERGHVIVIGATNRIDAIDPALR--RPGRFDREIEIGVPDRNGRKEILMI---- 188 Query: 666 IVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMG 700 + + L +S+E +N E+ D G Sbjct: 189 --------HTRNMPLGMSEEEKNKFLEEMADYTYG 215 >5G4G-A nrPDB Length = 721 Score = 148 bits (374), Expect = 6e-36, Method: Composition-based stats. Identities = 88/444 (19%), Positives = 155/444 (34%), Gaps = 79/444 (17%) Query: 181 RVGGIDPLIGREKELERAI-------QVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 +GG+ +G+ +E+ + L +L G G GKT IA +A Sbjct: 186 DIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVANE--- 242 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGA 293 + S++ ++ +KY G E++ + + + E+ SI+FIDEI +I Sbjct: 243 -------SGANFLSINGPEIM--SKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPK 293 Query: 294 GAASGGQVDAA------NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR--RFQK-I 344 G+V+ L+ + G + VIG+T I D AL R RF + I Sbjct: 294 REEVQGEVERRVVAQLLTLMDGMKERGHVIVIGATN-----RIDAIDPALRRPGRFDREI 348 Query: 345 DITEPSIEETVQIIN--------GLKPKYE-------AHHDVRYTAKAVRAAVELAVKYI 389 +I P +I+ G+ + + A + + + A V + Sbjct: 349 EIGVPDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNA 408 Query: 390 NDRHLPDKAIDV-IDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDT 448 R+LP+ +D I ++ K + + S+ + +P Sbjct: 409 LRRYLPEIDLDKPIPTEILEKMVVTEDDFKNALKSIEPSSLREVMVEVPNVHWDDIG--G 466 Query: 449 LKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL 508 L+++ +K V + R G+ +P FL GP GVGKT + + Sbjct: 467 LEDVKREIKETVELPLLKPDVF------KRLGI----RPSKGFLLYGPPGVGKTLLAKAV 516 Query: 509 S--------KALGIELLR--FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPH 558 + G E+L SE R + P V D+ D++ Sbjct: 517 ATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDE----IDSIAPRRG 572 Query: 559 AVLLLDEIEKAHPDVFNILLQVMD 582 + N LL +D Sbjct: 573 TT----SDSGVTERIVNQLLTSLD 592 Score = 110 bits (275), Expect = 2e-24, Method: Composition-based stats. Identities = 53/218 (24%), Positives = 85/218 (38%), Gaps = 34/218 (15%) Query: 181 RVGGIDPLIGREKELERAIQV-------LCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 +GG++ + KE + L R LL G GVGKT +A+ +A Sbjct: 463 DIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATE--- 519 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGA 293 ++ S+ +L +K+ G+ EK + + K+ +Q +I+F+DEI +I Sbjct: 520 -------SNANFISIKGPEVL--SKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPR 570 Query: 294 GAASGGQVDAANLIKPLLSS-------GKIRVIGSTTYQEFSNIFEKDRALAR--RFQK- 343 + ++ LL+S + VIG+T + D AL R RF K Sbjct: 571 RGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNRPDI-----MDPALLRAGRFDKL 625 Query: 344 IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAA 381 I I P E + I+ DV A R Sbjct: 626 IYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRTE 663 Score = 48.3 bits (113), Expect = 1e-05, Method: Composition-based stats. Identities = 49/289 (16%), Positives = 85/289 (29%), Gaps = 70/289 (24%) Query: 422 NVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 +I A +S D L +++ ++ K E R G+ Sbjct: 163 TKIEIREEPASEVLEEVSRISYEDIGGLSEQLGKIREMIELPLKHPELF------ERLGI 216 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERH----------TVS 531 + GP G GKT + ++ G L + E M ++ S Sbjct: 217 TPPK----GVILYGPPGTGKTLIARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFS 272 Query: 532 RLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNG 591 + P + D+ D++ V E+E+ V LL +MD Sbjct: 273 KAEETAPSIIFIDE----IDSIAPKREEVQ--GEVER---RVVAQLLTLMDG-------- 315 Query: 592 RKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFD 651 ER + +I N DA++ + P +R I D Sbjct: 316 -------------------MKERGHVIVIGATNRIDAIDPALR--RPGRFDREIEIGVPD 354 Query: 652 HLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMG 700 I + + + L +S+E +N E+ D G Sbjct: 355 RNGRKEILMI------------HTRNMPLGMSEEEKNKFLEEMADYTYG 391 >4LGM-A nrPDB Length = 295 Score = 146 bits (368), Expect = 3e-35, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 98/260 (37%), Gaps = 51/260 (19%) Query: 158 NSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRK-------NNP 210 + E + + G+D + ++ L AI +R Sbjct: 4 DPFTNTSPPEEVVITEKPKVSFKDIVGLDDV---KEALREAIIYPTKRPDLFPLGWPRGI 60 Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 LL G G GKT IA +A I D LD S++ +K+ G+ EK + Sbjct: 61 LLYGPPGCGKTMIAAAVANEI----------DSIFMQLDAASVM--SKWLGEAEKNVANV 108 Query: 271 LKQLE-----QDTNSILFIDEIHTIIGAGAAS-GGQVDAAN-LIKPL------LSSGKIR 317 K Q+ +I+FID++ ++G + GG+ N +K + + K+ Sbjct: 109 FKMAREESKKQNKPAIIFIDQLDALLGVYSTEVGGEARVRNQFLKEMDGLLDKSENYKVY 168 Query: 318 VIGSTTYQEFSNIFEKDRALARRFQK-IDITEPSIEETVQIINGLKPKYEAHHDVR---- 372 VIG+T + D A RRFQK I + P E+ + + K + +V Sbjct: 169 VIGATNKP-----WRLDEAFLRRFQKRIYVPLPDYEQRLSLFKYYTSKIKLDTEVSLEEL 223 Query: 373 ------YTAKAVRAAVELAV 386 YTA +R V+ A Sbjct: 224 AKLTEGYTASDIRDIVQAAH 243 Score = 42.1 bits (97), Expect = 0.001, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 35/94 (37%), Gaps = 3/94 (3%) Query: 436 IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIK--MARAGLGHEHKPVGSFLF 493 P + S + + + G D EAL EAI R L P G L Sbjct: 4 DPFTNTSPPEEVVITEKPKVSFKDIVGLDDVKEALREAIIYPTKRPDLFPLGWPRG-ILL 62 Query: 494 AGPTGVGKTEVTVQLSKALGIELLRFDMSEYMER 527 GP G GKT + ++ + ++ D + M + Sbjct: 63 YGPPGCGKTMIAAAVANEIDSIFMQLDAASVMSK 96 >6AP1-A nrPDB Length = 519 Score = 144 bits (362), Expect = 2e-34, Method: Composition-based stats. Identities = 74/354 (20%), Positives = 125/354 (35%), Gaps = 60/354 (16%) Query: 146 EPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLC-- 203 + D G + N + + + + N + V G++ KE Sbjct: 1 GQEEGEDNGGEDNKKLRGALSSAILSEKPN-VKWEDVAGLEGAKEALKEAVILPVKFPHL 59 Query: 204 ----RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKY 259 R+ + LL G G GK+ +A+ +A A+ T +S+ L+ +K+ Sbjct: 60 FKGNRKPTSGILLYGPPGTGKSYLAKAVATE----------ANSTFFSVSSSDLV--SKW 107 Query: 260 RGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL-------- 311 G+ EK K L ++ SI+FIDE+ + G G+ +A+ IK L Sbjct: 108 MGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRG--EGESEASRRIKTELLVQMNGVG 165 Query: 312 -SSGKIRVIGSTTYQEFSNIFEKDRALARRFQ-KIDITEPSIEETVQIINGLKPKYEAHH 369 S + V+G+T ++ D A+ RRF+ +I I P + + Sbjct: 166 NDSQGVLVLGATNIP-----WQLDSAIRRRFERRIYIPLPDLAARTTMF----EINVGDT 216 Query: 370 DVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESV 429 T + R + Y D A+ V D R + + K V+ D E+ Sbjct: 217 PCVLTKEDYRTLGAMTEGYSGS----DIAVVVKDALMQPIRKIQSATHFKDVSTEDDETR 272 Query: 430 V-----ARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 E S + + D LK D I+ +AIK R Sbjct: 273 KLTPCSPGDDGAIEMSWTDIEADELKE-----------PDLTIKDFLKAIKSTR 315 Score = 45.2 bits (105), Expect = 1e-04, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 34/131 (25%), Gaps = 23/131 (17%) Query: 430 VARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVG 489 A ++ P L+ + LK V K KP Sbjct: 22 SAILSEKPNVKWEDV--AGLEGAKEALKEAVILPVKFPHLF-----------KGNRKPTS 68 Query: 490 SFLFAGPTGVGKTEVTVQLSKALGIELLRF----------DMSEYMERHTVSRLIGAPPG 539 L GP G GK+ + ++ SE + + + P Sbjct: 69 GILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPS 128 Query: 540 YVGFDQGGLLT 550 + D+ LT Sbjct: 129 IIFIDEVDALT 139 >3EIH-A nrPDB Length = 340 Score = 143 bits (359), Expect = 4e-34, Method: Composition-based stats. Identities = 74/354 (20%), Positives = 126/354 (35%), Gaps = 60/354 (16%) Query: 146 EPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLC-- 203 +P D G + N + + + + N + V G++ KE Sbjct: 3 DPFTGEDNGGEDNKKLRGALSSAILSEKPN-VKWEDVAGLEGAKEALKEAVILPVKFPHL 61 Query: 204 ----RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKY 259 R+ + LL G G GK+ +A+ +A A+ T +S+ L+ +K+ Sbjct: 62 FKGNRKPTSGILLYGPPGTGKSYLAKAVATE----------ANSTFFSVSSSDLV--SKW 109 Query: 260 RGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL-------- 311 G+ EK K L ++ SI+FID++ + G G+ +A+ IK L Sbjct: 110 MGESEKLVKQLFAMARENKPSIIFIDQVDALTGTRG--EGESEASRRIKTELLVQMNGVG 167 Query: 312 -SSGKIRVIGSTTYQEFSNIFEKDRALARRFQ-KIDITEPSIEETVQIINGLKPKYEAHH 369 S + V+G+T ++ D A+ RRF+ +I I P + + Sbjct: 168 NDSQGVLVLGATNIP-----WQLDSAIRRRFERRIYIPLPDLAARTTMF----EINVGDT 218 Query: 370 DVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESV 429 T + R + Y D A+ V D R + + K V+ D E+ Sbjct: 219 PCVLTKEDYRTLGAMTEGYSGS----DIAVVVKDALMQPIRKIQSATHFKDVSTEDDETR 274 Query: 430 V-----ARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 E S + + D LK D I+ +AIK R Sbjct: 275 KLTPCSPGDDGAIEMSWTDIEADELKE-----------PDLTIKDFLKAIKSTR 317 Score = 44.8 bits (104), Expect = 1e-04, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 34/131 (25%), Gaps = 23/131 (17%) Query: 430 VARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVG 489 A ++ P L+ + LK V K KP Sbjct: 24 SAILSEKPNVKWEDV--AGLEGAKEALKEAVILPVKFPHLF-----------KGNRKPTS 70 Query: 490 SFLFAGPTGVGKTEVTVQLSKALGIELLRF----------DMSEYMERHTVSRLIGAPPG 539 L GP G GK+ + ++ SE + + + P Sbjct: 71 GILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPS 130 Query: 540 YVGFDQGGLLT 550 + DQ LT Sbjct: 131 IIFIDQVDALT 141 >5XMK-A nrPDB Length = 437 Score = 142 bits (357), Expect = 6e-34, Method: Composition-based stats. Identities = 75/360 (20%), Positives = 128/360 (35%), Gaps = 60/360 (16%) Query: 140 HGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAI 199 G +K + D G + N + + + + N + V G++ KE Sbjct: 94 GGNKKISQEEGEDNGGEDNKKLRGALSSAILSEKPN-VKWEDVAGLEGAKEALKEAVILP 152 Query: 200 QVLC------RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSL 253 R+ + LL G G GK+ +A+ +A A+ T +S+ L Sbjct: 153 VKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATE----------ANSTFFSVSSSDL 202 Query: 254 LAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL-- 311 + +K+ G+ EK K L ++ SI+FID++ + G G+ +A+ IK L Sbjct: 203 V--SKWMGESEKLVKQLFAMARENKPSIIFIDQVDALTGTRG--EGESEASRRIKTELLV 258 Query: 312 -------SSGKIRVIGSTTYQEFSNIFEKDRALARRFQ-KIDITEPSIEETVQIINGLKP 363 S + V+G+T ++ D A+ RRF+ +I I P + + Sbjct: 259 QMNGVGNDSQGVLVLGATNIP-----WQLDSAIRRRFERRIYIPLPDLAARTTMF----E 309 Query: 364 KYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNV 423 T + R + Y D A+ V D R + + K V+ Sbjct: 310 INVGDTPCVLTKEDYRTLGAMTEGYSGS----DIAVVVKDALMQPIRKIQSATHFKDVST 365 Query: 424 ADIESVV-----ARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR 478 D E+ E S + + D LK D I+ +AIK R Sbjct: 366 EDDETRKLTPCSPGDDGAIEMSWTDIEADELKE-----------PDLTIKDFLKAIKSTR 414 Score = 44.0 bits (102), Expect = 2e-04, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 34/131 (25%), Gaps = 23/131 (17%) Query: 430 VARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVG 489 A ++ P L+ + LK V K KP Sbjct: 121 SAILSEKPNVKWEDV--AGLEGAKEALKEAVILPVKFPHLF-----------KGNRKPTS 167 Query: 490 SFLFAGPTGVGKTEVTVQLSKALGIELLRF----------DMSEYMERHTVSRLIGAPPG 539 L GP G GK+ + ++ SE + + + P Sbjct: 168 GILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPS 227 Query: 540 YVGFDQGGLLT 550 + DQ LT Sbjct: 228 IIFIDQVDALT 238 >2ZAO-A nrPDB Length = 444 Score = 142 bits (357), Expect = 6e-34, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 92/239 (38%), Gaps = 37/239 (15%) Query: 140 HGTRKDEPTQSSDPGSQPNSEEQAGGEERMEN---FTTNLNQLARVGGIDPLIGREKELE 196 DE SD ++ + E+ + +++ + + V G++ KE Sbjct: 91 QSGPVDEKGNDSDGEAESDDPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAV 150 Query: 197 RAIQVLC------RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDI 250 R LL G G GK+ +A+ +A + T +S+ Sbjct: 151 ILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVA---------TEANNSTFFSISS 201 Query: 251 GSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPL 310 L+ +K+ G+ EK K L + ++ SI+FIDEI ++ G+ + + +AA IK Sbjct: 202 SDLV--SKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRS--ENESEAARRIKTE 257 Query: 311 L---------SSGKIRVIGSTTYQEFSNIFEKDRALARRFQK-IDITEPSIEETVQIIN 359 + I V+G+T + D A+ RRF+K I I P + Sbjct: 258 FLVQMQGVGVDNDGILVLGATNIP-----WVLDSAIRRRFEKRIYIPLPEAHARAAMFR 311 Score = 40.2 bits (92), Expect = 0.003, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 50/154 (32%), Gaps = 22/154 (14%) Query: 415 SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 +++ + I +V SD L+ + LK V K T Sbjct: 105 EAESDDPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTG-- 162 Query: 475 KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLS-KALGIELLRFDMSEYMERHTVSRL 533 + P L GP G GK+ + ++ +A S+ VS+ Sbjct: 163 ---------KRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSISSSD-----LVSKW 208 Query: 534 IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIE 567 +G V L ++ +++ +DEI+ Sbjct: 209 LGESEKLV-----KNLFQLARENKPSIIFIDEID 237 >1XWI-A nrPDB Length = 322 Score = 141 bits (355), Expect = 1e-33, Method: Composition-based stats. Identities = 47/196 (23%), Positives = 78/196 (39%), Gaps = 34/196 (17%) Query: 180 ARVGGIDPLIGREKELERAIQVLC------RRRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 + V G++ KE R LL G G GK+ +A+ +A Sbjct: 12 SDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVA----- 66 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGA 293 + T +S+ L+ +K+ G+ EK K L + ++ SI+FIDEI ++ G+ Sbjct: 67 ----TEANNSTFFSISSSDLV--SKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGS 120 Query: 294 GAASGGQVDAANLIKPLL---------SSGKIRVIGSTTYQEFSNIFEKDRALARRFQK- 343 + + +AA IK + I V+G+T + D A+ RRF+K Sbjct: 121 RS--ENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIP-----WVLDSAIRRRFEKR 173 Query: 344 IDITEPSIEETVQIIN 359 I I P + Sbjct: 174 IYIPLPEPHARAAMFK 189 Score = 40.2 bits (92), Expect = 0.003, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 24/132 (18%) Query: 437 PEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGP 496 P S L+ + LK V K T + P L GP Sbjct: 7 PNVKWSDV--AGLEGAKEALKEAVILPIKFPHLFTG-----------KRTPWRGILLFGP 53 Query: 497 TGVGKTEVTVQLS-KALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIK 555 G GK+ + ++ +A S+ VS+ +G V L + Sbjct: 54 PGTGKSYLAKAVATEANNSTFFSISSSD-----LVSKWLGESEKLV-----KNLFQLARE 103 Query: 556 HPHAVLLLDEIE 567 + +++ +DEI+ Sbjct: 104 NKPSIIFIDEID 115 >6B5C-A nrPDB Length = 307 Score = 141 bits (354), Expect = 1e-33, Method: Composition-based stats. Identities = 51/253 (20%), Positives = 98/253 (38%), Gaps = 48/253 (18%) Query: 204 RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDF 263 RR L+VG G GKT +A+ +A +C ++ S +KYRG+ Sbjct: 55 RRPWKGVLMVGPPGTGKTMLAKAVA------------TECGTTFFNVSSSTLTSKYRGES 102 Query: 264 EKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL------------ 311 EK + L + + +FID+I +I S + +A+ +K L Sbjct: 103 EKLVRLLFEMARFYAPTTIFIDQIDSICSRRGTSD-EHEASRRVKSELLIQMDGVGGALE 161 Query: 312 ---SSGKIRVIGSTTYQEFSNIFEKDRALARRFQK-IDITEPSIEETVQIINGLKPKYEA 367 S + V+ +T + ++ D AL RR +K I I P+ + +++ + E Sbjct: 162 NDDPSKMVMVLAATNFP-----WDIDEALRRRLEKRIYIPLPTAKGRAELLKINLREVEL 216 Query: 368 HHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIE 427 D++ I ++ D+ + A LM + +R ++ +I Sbjct: 217 DPDIQLED-------------IAEKIEGYSGADITN-VCRDASLMAMRRRINGLSPEEIR 262 Query: 428 SVVARIARIPEKS 440 ++ ++P Sbjct: 263 ALSKEELQMPVTK 275 Score = 41.7 bits (96), Expect = 0.001, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 15/94 (15%) Query: 450 KNLGDRLKMLVFGQD-----KAIEALTEAIKMARAGLGHE----------HKPVGSFLFA 494 K+L + L+ + ++ I L EA K+ R + +P L Sbjct: 5 KDLVEALERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMV 64 Query: 495 GPTGVGKTEVTVQLSKALGIELLRFDMSEYMERH 528 GP G GKT + ++ G S ++ Sbjct: 65 GPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKY 98 >5ZQM-A nrPDB Length = 309 Score = 140 bits (353), Expect = 2e-33, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 103/270 (38%), Gaps = 50/270 (18%) Query: 204 RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDF 263 RR L+VG G GKT +A+ +A +C ++ S +KYRG+ Sbjct: 59 RRPWKGVLMVGPPGTGKTLLAKAVA------------TECKTTFFNVSSSTLTSKYRGES 106 Query: 264 EKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL------------ 311 EK + L + + + +FIDEI +I S + +A+ +K L Sbjct: 107 EKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSE-EHEASRRVKAELLVQMDGVGGTSE 165 Query: 312 ---SSGKIRVIGSTTYQEFSNIFEKDRALARRFQK-IDITEPSIEETVQIINGLKPKYEA 367 S + V+ +T + ++ D AL RR +K I I PS + +++ + E Sbjct: 166 NDDPSKMVMVLAATNFP-----WDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELEL 220 Query: 368 HHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIE 427 DV + + E Y D+ + A LM + +R + + +I Sbjct: 221 ADDV-----DLASIAENMEGY--------SGADITN-VCRDASLMAMRRRIEGLTPEEIR 266 Query: 428 SVVARIARIPEKSVSQSDRDTLKNLGDRLK 457 ++ +P + LK + + Sbjct: 267 NLSKEEMHMPTT--MEDFEMALKKVSKSVS 294 Score = 41.0 bits (94), Expect = 0.002, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 15/94 (15%) Query: 450 KNLGDRLKMLVFGQDKAIE-----ALTEAIKMARAGLGHE----------HKPVGSFLFA 494 K+L + L+ + Q+ + L EA K+ + + +P L Sbjct: 9 KDLVEALERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMV 68 Query: 495 GPTGVGKTEVTVQLSKALGIELLRFDMSEYMERH 528 GP G GKT + ++ S ++ Sbjct: 69 GPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKY 102 >6B5D-A nrPDB Length = 309 Score = 139 bits (351), Expect = 4e-33, Method: Composition-based stats. Identities = 53/220 (24%), Positives = 83/220 (37%), Gaps = 38/220 (17%) Query: 184 GIDPLIGR------EKELERAIQVLC------RRRKNNPLLVGESGVGKTAIAEGLAWRI 231 +D +IG E ++ R +L G G GKT IA +A Sbjct: 28 SLDDIIGMHDVKQVLHEAVTLPLLVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASES 87 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII 291 D + +K+RGD EK + L + SI+FIDEI T+ Sbjct: 88 SSTFFTVSSTDLS------------SKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTL- 134 Query: 292 GAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNI---------FEKDRALARRFQ 342 G + G+ +A+ +K S +++ GS + + +E D AL RRF+ Sbjct: 135 GGQRGNSGEHEASRRVK---SEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRRRFE 191 Query: 343 K-IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAA 381 K I I P I+ ++I ++ Y A R Sbjct: 192 KRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLAARTE 231 Score = 38.6 bits (88), Expect = 0.010, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 66/194 (34%), Gaps = 39/194 (20%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 +++V +A E ++S D + ++ L V E GL Sbjct: 12 VQAVRGTMATNTENTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQ--------GLRSPW 63 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQ 545 K + + AGP G GKT + ++ ++ S+ G V Sbjct: 64 K---AMVLAGPPGTGKTLIARAIASESSSTFFTVSSTDLS-----SKWRGDSEKIV---- 111 Query: 546 GGLLTDAVIKHPHAVLLLDEIE------------KAHPDVFNILLQVMDNGTLTDNNGRK 593 LL + + +++ +DEI+ +A V + L M D + K Sbjct: 112 -RLLFELARFYAPSIIFIDEIDTLGGQRGNSGEHEASRRVKSEFLVQM------DGSQNK 164 Query: 594 ADFRNVVLVMTTNA 607 D R V ++ TN Sbjct: 165 FDSRRVFVLAATNI 178 >5WC0-A nrPDB Length = 472 Score = 137 bits (344), Expect = 2e-32, Method: Composition-based stats. Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 26/188 (13%) Query: 204 RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDF 263 R +L G G GKT IA +A D + +K+RGD Sbjct: 223 RSPWKAMVLAGPPGTGKTLIARAIASESSSTFFTVSSTDLS------------SKWRGDS 270 Query: 264 EKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTT 323 EK + L + SI+FID+I T+ G + G+ +A+ +K S +++ GS Sbjct: 271 EKIVRLLFELARFYAPSIIFIDQIDTL-GGQRGNSGEHEASRRVK---SEFLVQMDGSQN 326 Query: 324 YQEFSNI---------FEKDRALARRFQK-IDITEPSIEETVQIINGLKPKYEAHHDVRY 373 + + +E D AL RRF+K I I P I+ ++I ++ Y Sbjct: 327 KFDSRRVFVLAATNIPWELDEALRRRFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINY 386 Query: 374 TAKAVRAA 381 A R Sbjct: 387 DDLAARTE 394 Score = 37.9 bits (86), Expect = 0.019, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 11/84 (13%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 +++V +A E ++S D + ++ L V E GL Sbjct: 175 VQAVRGTMATNTENTMSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQ--------GLRSPW 226 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLS 509 K + + AGP G GKT + ++ Sbjct: 227 K---AMVLAGPPGTGKTLIARAIA 247 >4LCB-A nrPDB Length = 367 Score = 133 bits (333), Expect = 4e-31, Method: Composition-based stats. Identities = 58/331 (17%), Positives = 116/331 (35%), Gaps = 43/331 (12%) Query: 119 QAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQ 178 +L +R I ++ ++ P + Q +E + Sbjct: 39 TQIVVLYPDSPTRQAYEQMIDEYKKRVSVLENMLPETPQEDNSQKTDDELIMKEKP-KVS 97 Query: 179 LARVGGIDPLIGREKELERAIQVLCRRRK-------NNPLLVGESGVGKTAIAEGLAWRI 231 + + G+D + KE +R LL G G GKT +A +A I Sbjct: 98 FSDIVGLDDVKEALKEAIIYP---SKRPDLFPLGWPRGILLYGPPGNGKTMLAAAVANEI 154 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ-----DTNSILFIDE 286 D +D S++ +K+ G+ EK + + + +I+F+DE Sbjct: 155 ----------DSYFIHVDAASIM--SKWLGEAEKNVAKIFNTAREYSKKDNKPAIIFVDE 202 Query: 287 IHTIIGAGAAS-GGQVDAAN-LIKPL------LSSGKIRVIGSTTYQEFSNIFEKDRALA 338 I ++G + GG+V N +K + + + VIG+T + D Sbjct: 203 IDALLGTYTSEVGGEVRVRNQFLKEMDGIMDKNENYMVYVIGATNKP-----WRLDEPFL 257 Query: 339 RRFQK-IDITEPSIEETVQIINGLKPKYEAHH-DVRYTAKAVRAAVELAVKYINDRHLPD 396 RRFQK I + P + + + K + + D++ AK ++ I Sbjct: 258 RRFQKRIYVPLPDFNQRLALFKYYTSKVKLGNVDLQELAKMTEGYSASDIRDIVQSAHMR 317 Query: 397 KAIDVIDEAGARARLMPVSKRKKTVNVADIE 427 ++ ++ + R + + K+ + + Sbjct: 318 VVKEMFEKNLSEPREITMDDFKEVLKIRKPS 348 Score = 41.3 bits (95), Expect = 0.002, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 397 KAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRL 456 KAIDV+ + ++ + I+ R++ + D + D L Sbjct: 33 KAIDVL----TQIVVLYPDSPTRQAYEQMIDEYKKRVSVLENMLPETPQEDNSQKTDDEL 88 Query: 457 KML---------VFGQDKAIEALTEAIK--MARAGLGHEHKPVGSFLFAGPTGVGKTEVT 505 M + G D EAL EAI R L P G L GP G GKT + Sbjct: 89 IMKEKPKVSFSDIVGLDDVKEALKEAIIYPSKRPDLFPLGWPRG-ILLYGPPGNGKTMLA 147 Query: 506 VQLSKALGIELLRFDMSEYMER 527 ++ + + D + M + Sbjct: 148 AAVANEIDSYFIHVDAASIMSK 169 >3D8B-A nrPDB Length = 357 Score = 122 bits (305), Expect = 7e-28, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 104/282 (36%), Gaps = 55/282 (19%) Query: 138 ISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLA--------------RVG 183 G ++ Q G+ P +ER++N + +L + Sbjct: 29 KQDGGEQNGGMQCKPYGAGPTEPAH-PVDERLKNLEPKMIELIMNEIMDHGPPVNWEDIA 87 Query: 184 GIDPLIGREKELERAIQVLC------RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237 G++ KE+ + R LL G G GKT I + +A + Sbjct: 88 GVEFAKATIKEIVVWPMLRPDIFTGLRGPPKGILLFGPPGTGKTLIGKCIASQ------- 140 Query: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS 297 + T +S+ SL +K+ G+ EK +AL +++FIDEI +++ Sbjct: 141 ---SGATFFSISASSLT--SKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRG-- 193 Query: 298 GGQVDAANLIKPLL----------SSGKIRVIGSTTYQEFSNIFEKDRALARRF-QKIDI 346 G+ +++ IK S +I V+G+T + E D A RR +++ I Sbjct: 194 DGEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQ-----EIDEAARRRLVKRLYI 248 Query: 347 TEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKY 388 P QI+ L K + + + + V+ + + Sbjct: 249 PLPEASARKQIVINLMSKEQ----CCLSEEEIEQIVQQSDAF 286 Score = 41.3 bits (95), Expect = 0.001, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 63/192 (32%), Gaps = 28/192 (14%) Query: 479 AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPP 538 GL K L GP G GKT + ++ G S S+ +G Sbjct: 111 TGLRGPPK---GILLFGPPGTGKTLIGKCIASQSGATFFSISAS-----SLTSKWVGE-- 160 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 598 G L AV+ +DEI+ LL +G + K +F Sbjct: 161 ---GEKMVRALFAVARCQQPAVIFIDEIDS--------LLSQRGDGEHESSRRIKTEFLV 209 Query: 599 VVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIF--TPEFRNRLDNIIWFDH---- 652 + TT++ R + + + +K+++ PE R +I Sbjct: 210 QLDGATTSSEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIVINLMSKEQC 269 Query: 653 -LSTDVIHQVVD 663 LS + I Q+V Sbjct: 270 CLSEEEIEQIVQ 281 >4D81-A nrPDB Length = 283 Score = 117 bits (293), Expect = 2e-26, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 101/279 (36%), Gaps = 54/279 (19%) Query: 176 LNQLARVGGIDPLIGREKELERAIQVLCRRRK-------NNPLLVGESGVGKTAIAEGLA 228 L + G++ + KE +R LL G G GKT IA +A Sbjct: 10 KVTLNEIVGLEDVKEALKEAVVYP---SKRPDLFPLGWPRGILLYGPPGCGKTMIAAAVA 66 Query: 229 WRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE-----QDTNSILF 283 + D +D S++ +K+ G+ EK + K ++ +I+F Sbjct: 67 NEL----------DSEFIHVDAASIM--SKWLGEAEKNVAKIFKTARELSKKENKPAIIF 114 Query: 284 IDEIHTIIGAGAAS-GGQVDAAN-LIKPL------LSSGKIRVIGSTTYQEFSNIFEKDR 335 IDE+ ++ + + GG+ N +K + K+ VIG+T + D Sbjct: 115 IDELDALLASYTSEVGGEARVRNQFLKEMDGLADKNEISKVYVIGATNKP-----WRLDE 169 Query: 336 ALARRFQK-IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHL 394 RRFQK I IT P ++++ K + +V + + D + Sbjct: 170 PFLRRFQKRIYITLPDKAHRLELLKHYSSKVKLDPNVNLEE----------LAELTDGYT 219 Query: 395 PDKAIDVIDEAGARARLMPVSK---RKKTVNVADIESVV 430 D++ A R K + +N+ D V+ Sbjct: 220 ASDIRDIVQSAHMRVVKEMFEKNLQEPRAINMDDFREVL 258 Score = 46.3 bits (108), Expect = 5e-05, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 84/252 (33%), Gaps = 47/252 (18%) Query: 449 LKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL 508 L+++ + LK V K + LG L GP G GKT + + Sbjct: 19 LEDVKEALKEAVVYPSKRPDLFP---------LGWPR----GILLYGPPGCGKTMIAAAV 65 Query: 509 SKALGIELLRFDMSEYMERHTVSRLIGAPPGYVG--FDQGGLLTDAVIKHPHAVLLLDEI 566 + L E + D + M S+ +G V F L+ P A++ +DE+ Sbjct: 66 ANELDSEFIHVDAASIM-----SKWLGEAEKNVAKIFKTARELSKK-ENKP-AIIFIDEL 118 Query: 567 EK----------AHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN--------AG 608 + V N L+ M D K + V ++ TN Sbjct: 119 DALLASYTSEVGGEARVRNQFLKEM------DGLADKNEISKVYVIGATNKPWRLDEPFL 172 Query: 609 VRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNII-WFDHLSTDVIHQVVDKFIV 667 R +R I L + + + ++ + L+ + D + I +V + Sbjct: 173 RRFQKRIYITLPDKAHRLELLKHYSSKVKLDPNVNLEELAELTDGYTASDIRDIVQSAHM 232 Query: 668 ELQVQLDQKGVS 679 + ++ +K + Sbjct: 233 RVVKEMFEKNLQ 244 >5Z6Q-A nrPDB Length = 392 Score = 117 bits (292), Expect = 2e-26, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 99/240 (41%), Gaps = 47/240 (19%) Query: 143 RKDEPTQSSDPGSQPNSEEQAGGEERMENFTTN--LNQLARVG---GIDPLIGRE----- 192 + + + S P + ++ +++ N +N++ G D + G++ Sbjct: 70 KTNRTNKPSTPTTATRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQDLAKQA 129 Query: 193 -KELERAIQVLC------RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTI 245 +E+ + R LL G G GKT +A+ +A ++ T Sbjct: 130 LQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAE----------SNATF 179 Query: 246 YSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAAN 305 +++ SL +KY G+ EK +AL + SI+FIDE+ +++ G+ DA+ Sbjct: 180 FNISAASLT--SKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERR--EGEHDASR 235 Query: 306 LIKPLL----------SSGKIRVIGSTTYQEFSNIFEKDRALARRF-QKIDITEPSIEET 354 +K ++ V+G+T + E D A+ RRF +++ ++ P+ E Sbjct: 236 RLKTEFLIEFDGVQSAGDDRVLVMGATNRPQ-----ELDEAVLRRFIKRVYVSLPNEETR 290 Score = 41.7 bits (96), Expect = 0.001, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 45/143 (31%), Gaps = 28/143 (19%) Query: 460 VFGQDKAIEALTEAIKMAR------AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG 513 + GQD A +AL E + + GL + L GP G GKT + ++ Sbjct: 120 IAGQDLAKQALQEIVILPSLRPELFTGLRAPAR---GLLLFGPPGNGKTMLAKAVAAESN 176 Query: 514 IELLRF----------DMSEYMERHTVSRLIGAPPGYVGFDQGGLLT--------DAVIK 555 E + R + P + D+ L DA + Sbjct: 177 ATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRR 236 Query: 556 -HPHAVLLLDEIEKAHPDVFNIL 577 ++ D ++ A D ++ Sbjct: 237 LKTEFLIEFDGVQSAGDDRVLVM 259 >3M6A-A nrPDB Length = 543 Score = 111 bits (276), Expect = 1e-24, Method: Composition-based stats. Identities = 75/378 (19%), Positives = 146/378 (38%), Gaps = 53/378 (14%) Query: 381 AVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVA-RIARIPEK 439 V+ + I + +PD + + R +P S + +V I+ +VA + Sbjct: 9 EVQTLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDWLVALPWTDETDD 68 Query: 440 SVSQSDRDTLKNLG----DRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAG 495 + + L + +++K + + A++ LT+++K P+ AG Sbjct: 69 KLDLKEAGRLLDEEHHGLEKVKERIL-EYLAVQKLTKSLKG----------PI--LCLAG 115 Query: 496 PTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTV----SRLIGAPPGYV--GFDQGGLL 549 P GVGKT + ++K+LG + +R + + + +GA PG + G + G L Sbjct: 116 PPGVGKTSLAKSIAKSLGRKFVRISLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGKL 175 Query: 550 TDAVIKHPHAVLLLDEIEKAHPDV----FNILLQVMD---NGTLTDNNGRKA-DFRNVVL 601 + V LLDEI+K D + +L+V+D N + +D+ + D V+ Sbjct: 176 --------NPVFLLDEIDKMSSDFRGDPSSAMLEVLDPEQNSSFSDHYIEETFDLSKVLF 227 Query: 602 VMTTN----AGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDV 657 + T N +R I I + +E +K P+ L Sbjct: 228 IATANNLATIPGPLRDRMEIINIAGYTEIEKLEIVKDHLLPKQIKEHGLKKSNLQLRDQA 287 Query: 658 IHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLA 717 I ++ + E V+ ++ ++ + A+ +AE+ R V + NL+ + Sbjct: 288 ILDIIRYYTREAGVRSLERQLAAICRKAAKAIVAEE--------RKRITVTEKNLQDFIG 339 Query: 718 NELLF-GSLVDGGQVTVA 734 + G QV V Sbjct: 340 KRIFRYGQAETEDQVGVV 357 Score = 47.9 bits (112), Expect = 2e-05, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 93/281 (33%), Gaps = 24/281 (8%) Query: 198 AIQVLCRRRKNNPL-LVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAG 256 A+Q L + K L L G GVGKT++A+ +A + + V + S G Sbjct: 98 AVQKLTKSLKGPILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLGGVRDESEIRGHRRT- 156 Query: 257 TKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKI 316 Y G R +K+ + L +DEI + L SS Sbjct: 157 --YVGAMPGRIIQGMKKAGKLNPVFL-LDEIDKMSSDFRGDPSSAMLEVLDPEQNSSFSD 213 Query: 317 RVIGST-------TYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIIN-GLKPKYEAH 368 I T +N+ L R + I+I + E ++I+ L PK Sbjct: 214 HYIEETFDLSKVLFIATANNLATIPGPLRDRMEIINIAGYTEIEKLEIVKDHLLPKQIKE 273 Query: 369 HD-----VRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNV 423 H ++ +A+ + + R L + + +A V++ +K + V Sbjct: 274 HGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQLAAI----CRKAAKAIVAEERKRITV 329 Query: 424 ADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQD 464 E + Q++ + + L G D Sbjct: 330 T--EKNLQDFIGKRIFRYGQAETEDQVGVVTGLAYTTVGGD 368 >3HU1-A nrPDB Length = 489 Score = 110 bits (274), Expect = 2e-24, Method: Composition-based stats. Identities = 53/318 (16%), Positives = 112/318 (35%), Gaps = 50/318 (15%) Query: 156 QPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAI-------QVLCRRRKN 208 + ++ EE + + +GG + + KE+ + + + Sbjct: 185 EGEPIKREDEEESLNEVGYD-----DIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR 239 Query: 209 NPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFK 268 LL G G GKT IA +A + ++ ++ +K G+ E + Sbjct: 240 GILLYGPPGTGKTLIARAVANE----------TGAFFFLINGPEIM--SKLAGESESNLR 287 Query: 269 ALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAA------NLIKPLLSSGKIRVIGST 322 ++ E++ +I+FIDE+ I + G+V+ L+ L + V+ +T Sbjct: 288 KAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAAT 347 Query: 323 TYQEFSNIFEKDRALAR--RFQK-IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVR 379 D AL R RF + +DI P ++I+ + DV A Sbjct: 348 NRPNS-----IDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANE 402 Query: 380 A-----------AVELAVKYINDR-HLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIE 427 E A++ I + L D + ID + + + + ++ ++ Sbjct: 403 THGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPS 462 Query: 428 SVVARIARIPEKSVSQSD 445 ++ + +P+ + Sbjct: 463 ALRETVVEVPQVTWEDIG 480 Score = 42.9 bits (99), Expect = 6e-04, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 34/111 (30%), Gaps = 27/111 (24%) Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRF----------DMSEYMERHTVSRLIG 535 KP L GP G GKT + ++ G SE R Sbjct: 236 KPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEK 295 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDV----FNILLQVMD 582 P + D+ DA+ EK H +V + LL +MD Sbjct: 296 NAPAIIFIDE----LDAIAPKR---------EKTHGEVERRIVSQLLTLMD 333 >6NYV-B nrPDB Length = 314 Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats. Identities = 66/315 (20%), Positives = 110/315 (34%), Gaps = 54/315 (17%) Query: 148 TQSSDPGSQPNSEEQAGGEERMENF--TTNLNQLARVGGIDPLIGREKELERAIQVLC-- 203 + +S P EQ + ++ + + G D +E+ V Sbjct: 5 SGASTPVVSVKGVEQKLVQLILDEIVEGGAKVEWTDIAGQDVAKQALQEMVILPSVRPEL 64 Query: 204 ----RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKY 259 R LL G G GKT +A +A +C+ L+I + +KY Sbjct: 65 FTGLRAPAKGLLLFGPPGNGKTLLARAVA------------TECSATFLNISAASLTSKY 112 Query: 260 RGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL-------- 311 GD EK +AL SI+FIDE+ ++ S + +A+ +K Sbjct: 113 VGDGEKLVRALFAVARHMQPSIIFIDEVDSL--LSERSSSEHEASRRLKTEFLVEFDGLP 170 Query: 312 ---SSGKIRVIGSTTYQEFSNIFEKDRALARRFQK-IDITEPSIEETVQIINGLKPKYEA 367 +I V+ +T + E D A RRF K + ++ P + ++N L K Sbjct: 171 GNPDGDRIVVLAATNRPQ-----ELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQK--- 222 Query: 368 HHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRK-------KT 420 +A+R ++ Y D D A R + V + K + Sbjct: 223 -QGSPLDTEALRRLAKITDGYSGS----DLTALAKDAALEPIRELNVEQVKCLDISAMRA 277 Query: 421 VNVADIESVVARIAR 435 + D S + RI R Sbjct: 278 ITEQDFHSSLKRIRR 292 Score = 41.3 bits (95), Expect = 0.002, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 27/118 (22%) Query: 460 VFGQDKAIEALTEAIKMAR------AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG 513 + GQD A +AL E + + GL K L GP G GKT + ++ Sbjct: 41 IAGQDVAKQALQEMVILPSVRPELFTGLRAPAK---GLLLFGPPGNGKTLLARAVATECS 97 Query: 514 IELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAV----IKHPHAVLLLDEIE 567 L + S+ +G G L A+ +++ +DE++ Sbjct: 98 ATFLNISAA-----SLTSKYVG---------DGEKLVRALFAVARHMQPSIIFIDEVD 141 >4L16-A nrPDB Length = 334 Score = 102 bits (254), Expect = 6e-22, Method: Composition-based stats. Identities = 52/226 (23%), Positives = 81/226 (35%), Gaps = 40/226 (17%) Query: 180 ARVGGIDPLIGREKELERAIQVLC------RRRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 A V G++ +E+ R LL G G GKT I +A + Sbjct: 56 ADVAGLEGAKKALREIVVLPFKRPDVFTGIRAPPKGVLLFGPPGTGKTMIGRCVASQ--- 112 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGA 293 C +I + +K+ G+ EK +AL S++FIDEI +++ + Sbjct: 113 ---------CKATFFNISASSLTSKWVGEGEKLVRALFSVARLKLPSVIFIDEIDSLLSS 163 Query: 294 GAASGGQVDAANLIKPLL----------SSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 + S + + IK ++ V+G+T + E D A RRFQK Sbjct: 164 RSESEHES--SRRIKTEFLVQLDGVNTAPDERLLVLGATNRPQ-----ELDEAARRRFQK 216 Query: 344 -IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKY 388 + I P E QI+ L T + EL Y Sbjct: 217 RLYIALPEPESRTQIVQNLL----VGTRHDITNHNLERIRELTDGY 258 Score = 39.0 bits (89), Expect = 0.007, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 29/123 (23%) Query: 449 LKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL 508 L+ L+ +V K + T G+ K L GP G GKT + + Sbjct: 61 LEGAKKALREIVVLPFKRPDVFT--------GIRAPPK---GVLLFGPPGTGKTMIGRCV 109 Query: 509 SKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAV----IKHPHAVLLLD 564 + S S+ +G +G L A+ +V+ +D Sbjct: 110 ASQCKATFFNISAS-----SLTSKWVG---------EGEKLVRALFSVARLKLPSVIFID 155 Query: 565 EIE 567 EI+ Sbjct: 156 EID 158 >3CF0-A nrPDB Length = 301 Score = 101 bits (252), Expect = 9e-22, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 72/212 (33%), Gaps = 36/212 (16%) Query: 181 RVGGIDPLIGREKELERAI-------QVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 +GG++ + +EL + L G G GKT +A+ +A Sbjct: 16 DIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANEC-- 73 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGA 293 S+ LL T + G+ E + + + Q +LF DE+ +I A Sbjct: 74 --------QANFISIKGPELL--TMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA 123 Query: 294 GAASGGQVDAA---------NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR--RF- 341 + G A + + + + +IG+T + D A+ R R Sbjct: 124 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDI-----IDPAILRPGRLD 178 Query: 342 QKIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 Q I I P + V I+ K DV Sbjct: 179 QLIYIPLPDEKSRVAILKANLRKSPVAKDVDL 210 Score = 59.8 bits (143), Expect = 4e-09, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 54/164 (32%), Gaps = 28/164 (17%) Query: 429 VVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPV 488 + + +P+ + L+++ L+ LV + + L P Sbjct: 2 LRETVVEVPQVTWEDIG--GLEDVKRELQELVQYPVEHPDKF----------LKFGMTPS 49 Query: 489 GSFLFAGPTGVGKTEVTVQLSK--------ALGIELLR--FDMSEYMERHTVSRLIGAPP 538 LF GP G GKT + ++ G ELL F SE R + A P Sbjct: 50 KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAP 109 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD 582 + FD+ + A + A V N +L MD Sbjct: 110 CVLFFDELDSIAKARGGNIGDG------GGAADRVINQILTEMD 147 >6HE9-H nrPDB Length = 390 Score = 101 bits (250), Expect = 2e-21, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 88/240 (36%), Gaps = 38/240 (15%) Query: 157 PNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCR-------RRKNN 209 P S++ +E +GG+D I +E + Sbjct: 112 PTSKDPMVYGFEVEEKPE--VSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKG 169 Query: 210 PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKA 269 LL G G GKT +A+ +A + T + + KY G+ + + Sbjct: 170 VLLYGPPGTGKTLLAKAVANQ----------TRATFIRVVGSEFVQ--KYIGEGARLVRE 217 Query: 270 LLKQLEQDTNSILFIDEIHTIIGAGAASG--GQVDAANLIKPLLS-------SGKIRVIG 320 + + ++ SI+FIDE+ I S G + + LL+ G ++VIG Sbjct: 218 VFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIG 277 Query: 321 STTYQEFSNIFEKDRALAR--RFQK-IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKA 377 +T I D A+ R RF + I++ P+ E +QI K + DV + A Sbjct: 278 ATN-----RIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELA 332 Score = 44.0 bits (102), Expect = 2e-04, Method: Composition-based stats. Identities = 27/210 (12%), Positives = 72/210 (34%), Gaps = 27/210 (12%) Query: 371 VRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVV 430 V + + + + + + + + +E + ++++ + S Sbjct: 57 VGVVSDILEDGRVVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKD 116 Query: 431 ARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEA-LTEAIKMARAGLGHEHKPVG 489 + + + + + L +++ + +A+E L + A G+ Sbjct: 117 PMVYGFEVEEKPEVSYEDIGGLDVQIEEI----REAVELPLLKPELFAEVGIEPPK---- 168 Query: 490 SFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLL 549 L GP G GKT + ++ +R SE++++ Y+G +G L Sbjct: 169 GVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQK------------YIG--EGARL 214 Query: 550 TDAV----IKHPHAVLLLDEIEKAHPDVFN 575 V + +++ +DE++ N Sbjct: 215 VREVFQLAKEKAPSIIFIDELDAIAARRTN 244 >6HE4-H nrPDB Length = 267 Score = 100 bits (249), Expect = 2e-21, Method: Composition-based stats. Identities = 49/216 (22%), Positives = 82/216 (37%), Gaps = 36/216 (16%) Query: 181 RVGGIDPLIGREKELERAIQVLCR-------RRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 +GG+D I +E + LL G G GKT +A+ +A + Sbjct: 20 DIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQ--- 76 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGA 293 T + + KY G+ + + + + ++ SI+FIDE+ I Sbjct: 77 -------TRATFIRVVGSEFVQ--KYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAAR 127 Query: 294 GAASG--GQVDAANLIKPLLS-------SGKIRVIGSTTYQEFSNIFEKDRALAR--RFQ 342 S G + + LL+ G ++VIG+T I D A+ R RF Sbjct: 128 RTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATN-----RIDILDPAILRPGRFD 182 Query: 343 K-IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKA 377 + I++ P+ E +QI K + DV + A Sbjct: 183 RIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELA 218 Score = 43.6 bits (101), Expect = 3e-04, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 18/94 (19%) Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQ 545 +P L GP G GKT + ++ +R SE++++ Y+G + Sbjct: 51 EPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQK------------YIG--E 96 Query: 546 GGLLTDAV----IKHPHAVLLLDEIEKAHPDVFN 575 G L V + +++ +DE++ N Sbjct: 97 GARLVREVFQLAKEKAPSIIFIDELDAIAARRTN 130 >6MSK-B nrPDB Length = 440 Score = 100 bits (248), Expect = 3e-21, Method: Composition-based stats. Identities = 77/405 (19%), Positives = 129/405 (31%), Gaps = 73/405 (18%) Query: 50 DLVALRQELEAFIEQTTPVLPASEEER----DTQPTLSFQRVLQRAVFHVQSSGRNEVTG 105 D + + +E EQ P+ EEER D + T L+ + + V Sbjct: 70 DYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGS 129 Query: 106 ANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGG 165 + + S +++ + V ++H D + Sbjct: 130 EHYV--------SILSFVDKDLLEPGCSV--LLNHKVHAVIGVLMDDTDPLVTVMKVEKA 179 Query: 166 EERMENFTTNLNQLARVGGIDPLIGREKELERAI-------QVLCRRRKNNPLLVGESGV 218 + A +GG+D I KE + + + +L G G Sbjct: 180 PQE---------TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 230 Query: 219 GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT 278 GKT +A+ +A + T + L+ KY GD K + L + E+ Sbjct: 231 GKTLLAKAVANQ----------TSATFLRVVGSELIQ--KYLGDGPKLVRELFRVAEEHA 278 Query: 279 NSILFIDEIHTI---------IGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSN 329 SI+FIDEI I G ++ N + S G ++VI +T E Sbjct: 279 PSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIET-- 336 Query: 330 IFEKDRALAR--RF-QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAV 386 D AL R R +KI+ P + +I + DV + A +L+ Sbjct: 337 ---LDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTL-DDLIMAKDDLSG 392 Query: 387 KYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVA 431 I A LM + +R+ V D + Sbjct: 393 ADIKA-------------ICTEAGLMALRERRMKVTNEDFKKSKE 424 Score = 49.0 bits (115), Expect = 8e-06, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 80/246 (32%), Gaps = 49/246 (19%) Query: 435 RIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH-------KP 487 P +V + ++ + D + G D I+ + E++++ L H KP Sbjct: 167 TDPLVTVMKVEKAPQETYAD-----IGGLDNQIQEIKESVELP---LTHPEYYEEMGIKP 218 Query: 488 VGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGG 547 + GP G GKT + ++ LR SE + + +G P V Sbjct: 219 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL-----IQKYLGDGPKLV-----R 268 Query: 548 LLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNA 607 L +H +++ +DEI+ + N+G + + + +L Sbjct: 269 ELFRVAEEHAPSIVFIDEID------------AIGTKRYDSNSGGEREIQRTML------ 310 Query: 608 GVRETERKSIGLIHQDNSTDAMEEIK-KIFTPEFR--NRLDNIIWFDHLSTDVIHQVVDK 664 E + G + + M + + P R+D I F ++ Sbjct: 311 ---ELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQI 367 Query: 665 FIVELQ 670 + Sbjct: 368 HTSRMT 373 >5VFP-B nrPDB Length = 389 Score = 99.9 bits (247), Expect = 4e-21, Method: Composition-based stats. Identities = 77/405 (19%), Positives = 129/405 (31%), Gaps = 73/405 (18%) Query: 50 DLVALRQELEAFIEQTTPVLPASEEER----DTQPTLSFQRVLQRAVFHVQSSGRNEVTG 105 D + + +E EQ P+ EEER D + T L+ + + V Sbjct: 19 DYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGS 78 Query: 106 ANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGG 165 + + S +++ + V ++H D + Sbjct: 79 EHYV--------SILSFVDKDLLEPGCSV--LLNHKVHAVIGVLMDDTDPLVTVMKVEKA 128 Query: 166 EERMENFTTNLNQLARVGGIDPLIGREKELERAI-------QVLCRRRKNNPLLVGESGV 218 + A +GG+D I KE + + + +L G G Sbjct: 129 PQE---------TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGT 179 Query: 219 GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT 278 GKT +A+ +A + T + L+ KY GD K + L + E+ Sbjct: 180 GKTLLAKAVANQ----------TSATFLRVVGSELIQ--KYLGDGPKLVRELFRVAEEHA 227 Query: 279 NSILFIDEIHTI---------IGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSN 329 SI+FIDEI I G ++ N + S G ++VI +T E Sbjct: 228 PSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIET-- 285 Query: 330 IFEKDRALAR--RF-QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAV 386 D AL R R +KI+ P + +I + DV + A +L+ Sbjct: 286 ---LDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTL-DDLIMAKDDLSG 341 Query: 387 KYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVA 431 I A LM + +R+ V D + Sbjct: 342 ADIKA-------------ICTEAGLMALRERRMKVTNEDFKKSKE 373 Score = 48.7 bits (114), Expect = 1e-05, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 80/246 (32%), Gaps = 49/246 (19%) Query: 435 RIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH-------KP 487 P +V + ++ + D + G D I+ + E++++ L H KP Sbjct: 116 TDPLVTVMKVEKAPQETYAD-----IGGLDNQIQEIKESVELP---LTHPEYYEEMGIKP 167 Query: 488 VGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGG 547 + GP G GKT + ++ LR SE + + +G P V Sbjct: 168 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL-----IQKYLGDGPKLV-----R 217 Query: 548 LLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNA 607 L +H +++ +DEI+ + N+G + + + +L Sbjct: 218 ELFRVAEEHAPSIVFIDEID------------AIGTKRYDSNSGGEREIQRTML------ 259 Query: 608 GVRETERKSIGLIHQDNSTDAMEEIK-KIFTPEFR--NRLDNIIWFDHLSTDVIHQVVDK 664 E + G + + M + + P R+D I F ++ Sbjct: 260 ---ELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQI 316 Query: 665 FIVELQ 670 + Sbjct: 317 HTSRMT 322 >5EQT-A nrPDB Length = 257 Score = 99.5 bits (246), Expect = 4e-21, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 30/198 (15%) Query: 206 RKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEK 265 LL G G GKT +A+ LA + + T + L+ KY G+ + Sbjct: 38 PPKGVLLYGPPGCGKTLMAKALAHEV----------NATFIRVVGSELVR--KYIGEGAR 85 Query: 266 RFKALLKQLEQDTNSILFIDEIHTIIGAG--AASGGQVDAANLIKPLLS-------SGKI 316 L + ++ +I+FIDEI I +GG+ + + LL+ G + Sbjct: 86 LVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNV 145 Query: 317 RVIGSTTYQEFSNIFEKDRALAR--RFQK-IDITEPSIEETVQIINGLKPKYEA-HHDVR 372 +VI +T + D AL R RF + I++ P E ++I+ + + D+R Sbjct: 146 KVIAATNRPDI-----LDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLKGVDLR 200 Query: 373 YTAKAVRAAVELAVKYIN 390 A+ A +K I Sbjct: 201 AIAEMTEGASGADLKAIA 218 Score = 45.6 bits (106), Expect = 8e-05, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 43/113 (38%), Gaps = 20/113 (17%) Query: 462 GQDKAIEALTEAIKMARAGLGHEH-------KPVGSFLFAGPTGVGKTEVTVQLSKALGI 514 G K ++ L EAI++ L H P L GP G GKT + L+ + Sbjct: 9 GLKKQLQELREAIELP---LKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNA 65 Query: 515 ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIE 567 +R SE V + IG G L + + ++ +DEI+ Sbjct: 66 TFIRVVGSEL-----VRKYIGE-----GARLVHELFELAKEKAPTIIFIDEID 108 >5VHF-B nrPDB Length = 340 Score = 98.7 bits (244), Expect = 7e-21, Method: Composition-based stats. Identities = 60/271 (22%), Positives = 94/271 (34%), Gaps = 50/271 (18%) Query: 180 ARVGGIDPLIGREKELERAI-------QVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIV 232 A +GG+D I KE + + + +L G G GKT +A+ +A + Sbjct: 93 ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ-- 150 Query: 233 QGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTI-- 290 T + L+ KY GD K + L + E+ SI+FIDEI I Sbjct: 151 --------TSATFLRVVGSELIQ--KYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 200 Query: 291 -------IGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR--RF 341 G ++ N + S G ++VI +T E D AL R R Sbjct: 201 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIET-----LDPALIRPGRI 255 Query: 342 -QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAID 400 +KI+ P + +I + DV + A +L+ I Sbjct: 256 DRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTL-DDLIMAKDDLSGADIKA--------- 305 Query: 401 VIDEAGARARLMPVSKRKKTVNVADIESVVA 431 A LM + +R+ V D + Sbjct: 306 ----ICTEAGLMALRERRMKVTNEDFKKSKE 332 Score = 49.0 bits (115), Expect = 8e-06, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 80/246 (32%), Gaps = 49/246 (19%) Query: 435 RIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH-------KP 487 P +V + ++ + D + G D I+ + E++++ L H KP Sbjct: 75 TDPLVTVMKVEKAPQETYAD-----IGGLDNQIQEIKESVELP---LTHPEYYEEMGIKP 126 Query: 488 VGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGG 547 + GP G GKT + ++ LR SE + + +G P V Sbjct: 127 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL-----IQKYLGDGPKLV-----R 176 Query: 548 LLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNA 607 L +H +++ +DEI+ + N+G + + + +L Sbjct: 177 ELFRVAEEHAPSIVFIDEID------------AIGTKRYDSNSGGEREIQRTML------ 218 Query: 608 GVRETERKSIGLIHQDNSTDAMEEIK-KIFTPEFR--NRLDNIIWFDHLSTDVIHQVVDK 664 E + G + + M + + P R+D I F ++ Sbjct: 219 ---ELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQI 275 Query: 665 FIVELQ 670 + Sbjct: 276 HTSRMT 281 >6MDP-A nrPDB Length = 768 Score = 98.3 bits (243), Expect = 1e-20, Method: Composition-based stats. Identities = 69/450 (15%), Positives = 151/450 (33%), Gaps = 79/450 (17%) Query: 108 VLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSD---PGSQPNSEEQAG 164 +L + + Q + S++ + ++ + P+ + Sbjct: 183 ILKGEPASGKRQKIEVGLVVGNSQVAFEKAENSSLNLIGKAKTKENRQSIINPDWNFEKM 242 Query: 165 GEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIA 224 G ++ +++ + A + P ++ + + LL G G GKT +A Sbjct: 243 GIGGLDKEFSDIFRRAFASRVFP--------PEIVEQMGCKHVKGILLYGPPGCGKTLLA 294 Query: 225 EGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQD------- 277 + +++ P+V+ I + KY G+ E + L E++ Sbjct: 295 RQI-GKMLNAREPKVVNGPEILN----------KYVGESEANIRKLFADAEEEQRRLGAN 343 Query: 278 -TNSILFIDEIHTIIGAGAASGGQVDA-ANLIKPLLSS-------GKIRVIGSTTYQEFS 328 I+ DEI I + G ++ LLS I VIG T + Sbjct: 344 SGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDL- 402 Query: 329 NIFEKDRALAR--RFQ-KIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELA 385 D AL R R + K++I P + +QI++ + H + Sbjct: 403 ----IDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLS------------- 445 Query: 386 VKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSD 445 D + + A++ + +GA + + + +N I S + +S+ + Sbjct: 446 ----ADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIIASTKVEVDMEKAESLQVTR 501 Query: 446 RDTLKNLGDRLKML---------------VFGQDKAIEALTEAIKMARAGLGHEHK-PVG 489 D L +L + +K + + + + ++ + + P+ Sbjct: 502 GDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLV 561 Query: 490 SFLFAGPTGVGKTEVTVQLSKALGIELLRF 519 S L GP GKT + ++++ ++ Sbjct: 562 SVLLEGPPHSGKTALAAKIAEESNFPFIKI 591 >3H4M-A nrPDB Length = 285 Score = 98.3 bits (243), Expect = 1e-20, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 83/212 (39%), Gaps = 36/212 (16%) Query: 181 RVGGIDPLIGREKELERAI-------QVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 +GG++ + +E+ + + LL G G GKT +A+ +A Sbjct: 18 DIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATE--- 74 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGA 293 + T + L+ K+ G+ K + K ++ SI+FIDEI I Sbjct: 75 -------TNATFIRVVGSELVK--KFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAK 125 Query: 294 G--AASGGQVDAANLIKPLL-------SSGKIRVIGSTTYQEFSNIFEKDRALAR--RFQ 342 A +GG + + LL + G +++IG+T + D A+ R RF Sbjct: 126 RTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDI-----LDPAILRPGRFD 180 Query: 343 K-IDITEPSIEETVQIINGLKPKYEAHHDVRY 373 + I++ P + ++I+ K DV Sbjct: 181 RIIEVPAPDEKGRLEILKIHTRKMNLAEDVNL 212 Score = 41.7 bits (96), Expect = 0.001, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 47/161 (29%), Gaps = 29/161 (18%) Query: 441 VSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVG 500 V D L+ ++ +V K E + G+ L GP G G Sbjct: 14 VRYEDIGGLEKQMQEIREVVELPLKHPELF------EKVGIEPPK----GILLYGPPGTG 63 Query: 501 KTEVTVQLSKALGIELLRFDMSEY----------MERHTVSRLIGAPPGYVGFDQGGLLT 550 KT + ++ +R SE + + P + D+ Sbjct: 64 KTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDE----I 119 Query: 551 DAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNG 591 DA+ D + +V L+Q++ D G Sbjct: 120 DAIAAKR-----TDALTGGDREVQRTLMQLLAEMDGFDARG 155 >5UBV-A nrPDB Length = 246 Score = 98.3 bits (243), Expect = 1e-20, Method: Composition-based stats. Identities = 43/189 (22%), Positives = 70/189 (37%), Gaps = 26/189 (13%) Query: 202 LCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRG 261 L + LLVG G GKT +A +A M+ + Y G Sbjct: 34 LGGKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFF--YMSGSEFDEI----------YVG 81 Query: 262 DFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANL------IKPLLSSGK 315 KR + L + SI+FIDE+ I G + L + + Sbjct: 82 VGAKRVRELFNAAKAKAPSIVFIDELDAIGGRRNSRDATYVRQTLNQLLTEMDGFAQNSG 141 Query: 316 IRVIGSTTYQEFSNIFEKDRALAR--RFQK-IDITEPSIEETVQIINGLKPKYEAHHDVR 372 + ++G+T + E D+AL R RF + + ++ P + + I+ K + DV Sbjct: 142 VIILGATNFPES-----LDKALTRPGRFDRHVHVSLPDVRGRIAILKHHAKKIKIGSDVN 196 Query: 373 YTAKAVRAA 381 A A R + Sbjct: 197 IAAIAARTS 205 Score = 44.8 bits (104), Expect = 1e-04, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 39/103 (37%), Gaps = 14/103 (13%) Query: 465 KAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEY 524 + +E L K + G L GP G GKT + ++ G+ SE+ Sbjct: 20 ELVEFLRNPEKFSNLGGKLPK----GVLLVGPPGTGKTLLARAVAGEAGVPFFYMSGSEF 75 Query: 525 MERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIE 567 E +G VG + L +A +++ +DE++ Sbjct: 76 DE-----IYVG-----VGAKRVRELFNAAKAKAPSIVFIDELD 108 >5VHP-E nrPDB Length = 262 Score = 98.0 bits (242), Expect = 1e-20, Method: Composition-based stats. Identities = 48/231 (20%), Positives = 87/231 (37%), Gaps = 41/231 (17%) Query: 177 NQLARVGGIDPLIGREKELERAI----QVLCRR---RKNNPLLVGESGVGKTAIAEGLAW 229 + +GG+ I +E+ ++ R LL G G GKT +A +A Sbjct: 3 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 62 Query: 230 RIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHT 289 ++ DC + S++ KY G+ + + + I+F+DEI Sbjct: 63 QL----------DCNFLKVVSSSIV--DKYIGESARLIREMFNYARDHQPCIIFMDEIDA 110 Query: 290 IIGAGAASGGQVD---AANLIKPLLSSG------KIRVIGSTTYQEFSNIFEKDRALAR- 339 I G + G D L++ L ++++I +T + D AL R Sbjct: 111 IGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDT-----LDPALLRP 165 Query: 340 -RF-QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKY 388 R +KI I P+ + + I+ H ++ Y A V+L+ + Sbjct: 166 GRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDY-----EAIVKLSDGF 211 Score = 48.7 bits (114), Expect = 1e-05, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 60/172 (34%), Gaps = 31/172 (18%) Query: 439 KSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTG 498 +VS S+ L L+ ++ E R G+ L GP G Sbjct: 1 GNVSYSEIGGLSEQIRELREVIELPLTNPELF------QRVGIIPPK----GCLLYGPPG 50 Query: 499 VGKTEVTVQLSKALGIELLRFDMSEYMERH--TVSRLIGAP--------PGYVGFDQGGL 548 GKT + ++ L L+ S ++++ +RLI P + D+ Sbjct: 51 TGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDE--- 107 Query: 549 LTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD--NGTLTDNNGRKADFRN 598 DA+ + E A ++ L+++++ +G T + + N Sbjct: 108 -IDAIGGRRFS-----EGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATN 153 >3WHK-A nrPDB Length = 270 Score = 98.0 bits (242), Expect = 2e-20, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 29/179 (16%) Query: 206 RKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEK 265 LL G G GKT +A+ +A + + T + L+ KY G+ + Sbjct: 50 PPKGVLLYGPPGCGKTLMAKAIAHEV----------NATFIRVVGSELVR--KYIGEGAR 97 Query: 266 RFKALLKQLEQDTNSILFIDEIHTIIGAG--AASGGQVDAANLIKPLLS-------SGKI 316 L + ++ +I+FIDEI I +GG+ + + LL+ G + Sbjct: 98 LVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNV 157 Query: 317 RVIGSTTYQEFSNIFEKDRALAR--RFQK-IDITEPSIEETVQIINGLKPKYEAHHDVR 372 +VI +T + D AL R RF + I++ P QI+ K D+ Sbjct: 158 KVIAATNRPDI-----LDPALLRPGRFDRLIEVPLPDEFSRAQILQIHSRKMTTDDDIN 211 Score = 48.7 bits (114), Expect = 1e-05, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 71/207 (34%), Gaps = 35/207 (16%) Query: 462 GQDKAIEALTEAIKMARAGLGHEH-------KPVGSFLFAGPTGVGKTEVTVQLSKALGI 514 G K ++ L EAI++ L H P L GP G GKT + ++ + Sbjct: 21 GLKKQLQELREAIELP---LKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNA 77 Query: 515 ELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVF 574 +R SE V + IG G L + + ++ +DEI+ Sbjct: 78 TFIRVVGSE-----LVRKYIGE-----GARLVHELFELAKEKAPTIIFIDEIDAIGAK-- 125 Query: 575 NILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKK 634 L + G + + ++ + R ++ +I N D ++ Sbjct: 126 ----------RLDETTGGEREVNRTLMQLLAEMDG-FDPRGNVKVIAATNRPDILDPA-- 172 Query: 635 IFTPEFRNRLDNIIWFDHLSTDVIHQV 661 + P +RL + D S I Q+ Sbjct: 173 LLRPGRFDRLIEVPLPDEFSRAQILQI 199 >5VHO-B nrPDB Length = 267 Score = 97.6 bits (241), Expect = 2e-20, Method: Composition-based stats. Identities = 60/271 (22%), Positives = 94/271 (34%), Gaps = 50/271 (18%) Query: 180 ARVGGIDPLIGREKELERAI-------QVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIV 232 A +GG+D I KE + + + +L G G GKT +A+ +A + Sbjct: 19 ADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ-- 76 Query: 233 QGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTI-- 290 T + L+ KY GD K + L + E+ SI+FIDEI I Sbjct: 77 --------TSATFLRVVGSELIQ--KYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGT 126 Query: 291 -------IGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR--RF 341 G ++ N + S G ++VI +T E D AL R R Sbjct: 127 KRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIET-----LDPALIRPGRI 181 Query: 342 -QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAID 400 +KI+ P + +I + DV + A +L+ I Sbjct: 182 DRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTL-DDLIMAKDDLSGADIKA--------- 231 Query: 401 VIDEAGARARLMPVSKRKKTVNVADIESVVA 431 A LM + +R+ V D + Sbjct: 232 ----ICTEAGLMALRERRMKVTNEDFKKSKE 258 Score = 47.9 bits (112), Expect = 1e-05, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 80/246 (32%), Gaps = 49/246 (19%) Query: 435 RIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH-------KP 487 P +V + ++ + D + G D I+ + E++++ L H KP Sbjct: 1 TDPLVTVMKVEKAPQETYAD-----IGGLDNQIQEIKESVELP---LTHPEYYEEMGIKP 52 Query: 488 VGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGG 547 + GP G GKT + ++ LR SE + + +G P V Sbjct: 53 PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL-----IQKYLGDGPKLV-----R 102 Query: 548 LLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNA 607 L +H +++ +DEI+ + N+G + + + +L Sbjct: 103 ELFRVAEEHAPSIVFIDEID------------AIGTKRYDSNSGGEREIQRTML------ 144 Query: 608 GVRETERKSIGLIHQDNSTDAMEEIK-KIFTPEFR--NRLDNIIWFDHLSTDVIHQVVDK 664 E + G + + M + + P R+D I F ++ Sbjct: 145 ---ELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQI 201 Query: 665 FIVELQ 670 + Sbjct: 202 HTSRMT 207 >1LV7-A nrPDB Length = 257 Score = 96.0 bits (237), Expect = 5e-20, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 79/223 (35%), Gaps = 38/223 (17%) Query: 176 LNQLARVGGIDPLIGREKELERAI------QVLCRRRKNNPLLVGESGVGKTAIAEGLAW 229 A V G D EL + Q L + L+VG G GKT +A+ +A Sbjct: 8 KTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAG 67 Query: 230 RIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHT 289 +D + +G+ R + + +Q ++ I+FIDEI Sbjct: 68 EAKVPFFTISGSDFVEMFVGVGA------------SRVRDMFEQAKKAAPCIIFIDEIDA 115 Query: 290 IIGAGAA--SGGQVDAANLIKPLL-------SSGKIRVIGSTTYQEFSNIFEKDRALAR- 339 + A GG + + +L + I VI +T + D AL R Sbjct: 116 VGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPD-----VLDPALLRP 170 Query: 340 -RF-QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRA 380 RF +++ + P + QI+ + D+ A+ A Sbjct: 171 GRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDI---DAAIIA 210 Score = 43.6 bits (101), Expect = 3e-04, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 35/103 (33%), Gaps = 21/103 (20%) Query: 460 VFGQDKAIEALTEAI-------KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL 512 V G D+A E + E + + + G L GP G GKT + ++ Sbjct: 14 VAGCDEAKEEVAELVEYLREPSRFQKLGGKIPK----GVLMVGPPGTGKTLLAKAIAGEA 69 Query: 513 GIELLRFDMSEYME----------RHTVSRLIGAPPGYVGFDQ 545 + S+++E R + A P + D+ Sbjct: 70 KVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDE 112 >6MSD-E nrPDB Length = 403 Score = 95.3 bits (235), Expect = 9e-20, Method: Composition-based stats. Identities = 48/231 (20%), Positives = 87/231 (37%), Gaps = 41/231 (17%) Query: 177 NQLARVGGIDPLIGREKELERAI----QVLCRR---RKNNPLLVGESGVGKTAIAEGLAW 229 + +GG+ I +E+ ++ R LL G G GKT +A +A Sbjct: 144 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 203 Query: 230 RIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHT 289 ++ DC + S++ KY G+ + + + I+F+DEI Sbjct: 204 QL----------DCNFLKVVSSSIV--DKYIGESARLIREMFNYARDHQPCIIFMDEIDA 251 Query: 290 IIGAGAASGGQVD---AANLIKPLLSSG------KIRVIGSTTYQEFSNIFEKDRALAR- 339 I G + G D L++ L ++++I +T + D AL R Sbjct: 252 IGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDT-----LDPALLRP 306 Query: 340 -RF-QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKY 388 R +KI I P+ + + I+ H ++ Y A V+L+ + Sbjct: 307 GRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDY-----EAIVKLSDGF 352 Score = 47.9 bits (112), Expect = 2e-05, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 62/186 (33%), Gaps = 31/186 (16%) Query: 425 DIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 +++ +V ++ +VS S+ L L+ ++ E R G+ Sbjct: 128 EVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELF------QRVGIIPP 181 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLR----------FDMSEYMERHTVSRLI 534 L GP G GKT + ++ L L+ S + R + Sbjct: 182 K----GCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYAR 237 Query: 535 GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD--NGTLTDNNGR 592 P + D+ DA+ + E A ++ L+++++ +G T + + Sbjct: 238 DHQPCIIFMDE----IDAIGGRRFS-----EGTSADREIQRTLMELLNQMDGFDTLHRVK 288 Query: 593 KADFRN 598 N Sbjct: 289 MIMATN 294 >5VFU-A nrPDB Length = 361 Score = 95.3 bits (235), Expect = 9e-20, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 87/270 (32%), Gaps = 50/270 (18%) Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKN-------NPLLVGESGVGKTAIAEGLAWRIV 232 + VGG I + +E+ + R N LL G G GKT A +A R Sbjct: 103 SDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR-- 160 Query: 233 QGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIG 292 D + L+ KY G+ + + L + ++F DEI I G Sbjct: 161 --------TDACFIRVIGSELVQ--KYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 210 Query: 293 AGAASGGQVDAA---------NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR--RF 341 A G D N + G I+V+ +T + D AL R R Sbjct: 211 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT-----LDPALMRPGRL 265 Query: 342 -QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAID 400 +KI+ + P +E I D+R+ + R P+ Sbjct: 266 DRKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--------------ELLARLCPNSTGA 311 Query: 401 VIDEAGARARLMPVSKRKKTVNVADIESVV 430 I A + + R+K D V Sbjct: 312 EIRSVCTEAGMFAIRARRKIATEKDFLEAV 341 Score = 49.0 bits (115), Expect = 7e-06, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 89/303 (29%), Gaps = 62/303 (20%) Query: 376 KAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA----RLMPVSKRKKTVNV-----ADI 426 K + A E IN + +D+ D+ + V + K +++ D Sbjct: 28 KIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDP 87 Query: 427 ESVVARIARIPEKSVSQSD--RDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHE 484 + ++ P+ + S ++ ++ L + ++ + ++ + G+ Sbjct: 88 TVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNL----------GIEPP 137 Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFD 544 L GP G GKT ++ +R SE V + +G G Sbjct: 138 K----GVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE-----LVQKYVGE-----GAR 183 Query: 545 QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMT 604 L + ++ DEI+ + D G + + +L Sbjct: 184 MVRELFEMARTKKACLIFFDEID------------AIGGARFDDGAGGDNEVQRTML--- 228 Query: 605 TNAGVRETERKSIGLIHQDNSTDAMEEIK------KIFTPEFRNRLDNIIWFDHLSTDVI 658 E + G + N M + + P +R D I Sbjct: 229 ------ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHI 282 Query: 659 HQV 661 ++ Sbjct: 283 FKI 285 >2X8A-A nrPDB Length = 274 Score = 95.3 bits (235), Expect = 9e-20, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 74/198 (37%), Gaps = 31/198 (15%) Query: 175 NLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 ++ + + + P+ ++ + L LL G G GKT +A+ +A Sbjct: 17 DIREELTMAILAPVRNPDQ-----FKALGLVTPAGVLLAGPPGCGKTLLAKAVANE---- 67 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAG 294 + S+ LL Y G+ E+ + + ++ + ++F DE+ + Sbjct: 68 ------SGLNFISVKGPELLNM--YVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRR 119 Query: 295 A--ASGGQVDAANLIKPLL----SSGKIRVIGSTTYQEFSNIFEKDRALAR--RFQK-ID 345 + +G V N + + + ++ ++ +T + D A+ R R K + Sbjct: 120 SDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDI-----IDPAILRPGRLDKTLF 174 Query: 346 ITEPSIEETVQIINGLKP 363 + P + + I+ + Sbjct: 175 VGLPPPADRLAILKTITK 192 Score = 75.6 bits (184), Expect = 8e-14, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 52/158 (32%), Gaps = 31/158 (19%) Query: 435 RIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFA 494 +P + + L+++ + L M + + + GL L A Sbjct: 3 TVPNVTWADIG--ALEDIREELTMAILAPVRNPDQF------KALGLVTP----AGVLLA 50 Query: 495 GPTGVGKTEVTVQLSK--------ALGIELLR--FDMSEYMERHTVSRLIGAPPGYVGFD 544 GP G GKT + ++ G ELL SE R R + P + FD Sbjct: 51 GPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFD 110 Query: 545 QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD 582 + DA+ D A V N LL MD Sbjct: 111 E----VDALCPRRS-----DRETGASVRVVNQLLTEMD 139 >5VHO-A nrPDB Length = 267 Score = 94.9 bits (234), Expect = 1e-19, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 87/270 (32%), Gaps = 50/270 (18%) Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKN-------NPLLVGESGVGKTAIAEGLAWRIV 232 + VGG I + +E+ + R N LL G G GKT A +A R Sbjct: 18 SDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR-- 75 Query: 233 QGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIG 292 D + L+ KY G+ + + L + ++F DEI I G Sbjct: 76 --------TDACFIRVIGSELVQ--KYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 125 Query: 293 AGAASGGQVDAA---------NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR--RF 341 A G D N + G I+V+ +T + D AL R R Sbjct: 126 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT-----LDPALMRPGRL 180 Query: 342 -QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAID 400 +KI+ + P +E I D+R+ + R P+ Sbjct: 181 DRKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--------------ELLARLCPNSTGA 226 Query: 401 VIDEAGARARLMPVSKRKKTVNVADIESVV 430 I A + + R+K D V Sbjct: 227 EIRSVCTEAGMFAIRARRKIATEKDFLEAV 256 Score = 49.0 bits (115), Expect = 8e-06, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 67/239 (28%), Gaps = 52/239 (21%) Query: 436 IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHK-------PV 488 P ++ Q + D V G + IE L E ++ L H + P Sbjct: 1 DPTVTMMQVEEKPDVTYSD-----VGGCKEQIEKLREVVE---TPLLHPERFVNLGIEPP 52 Query: 489 GSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL 548 L GP G GKT ++ +R SE V + +G G Sbjct: 53 KGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSE-----LVQKYVGE-----GARMVRE 102 Query: 549 LTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG 608 L + ++ DEI+ + D G + + +L Sbjct: 103 LFEMARTKKACLIFFDEID------------AIGGARFDDGAGGDNEVQRTML------- 143 Query: 609 VRETERKSIGLIHQDNSTDAMEEIK------KIFTPEFRNRLDNIIWFDHLSTDVIHQV 661 E + G + N M + + P +R D I ++ Sbjct: 144 --ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKI 200 >6EPC-H nrPDB Length = 433 Score = 94.5 bits (233), Expect = 1e-19, Method: Composition-based stats. Identities = 56/270 (20%), Positives = 88/270 (32%), Gaps = 50/270 (18%) Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKN-------NPLLVGESGVGKTAIAEGLAWRIV 232 + VGG I + +E+ + R N LL G G GKT A +A R Sbjct: 175 SDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTD 234 Query: 233 QGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIG 292 +P + ++ KY G+ + + L + ++F DEI I G Sbjct: 235 ACFIPVIGSELV------------QKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGG 282 Query: 293 AGAASGGQVDAA---------NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR--RF 341 A G D N + G I+V+ +T + D AL R R Sbjct: 283 ARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDT-----LDPALMRPGRL 337 Query: 342 -QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAID 400 +KI+ + P +E I D+R+ + R P+ Sbjct: 338 DRKIEFSLPDLEGRTHIFKIHARSMSVERDIRF--------------ELLARLCPNSTGA 383 Query: 401 VIDEAGARARLMPVSKRKKTVNVADIESVV 430 I A + + R+K D V Sbjct: 384 EIRSVCTEAGMFAIRARRKIATEKDFLEAV 413 Score = 44.0 bits (102), Expect = 2e-04, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 66/239 (27%), Gaps = 52/239 (21%) Query: 436 IPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHK-------PV 488 P ++ Q + D V G + IE L E ++ L H + P Sbjct: 158 DPTVTMMQVEEKPDVTYSD-----VGGCKEQIEKLREVVE---TPLLHPERFVNLGIEPP 209 Query: 489 GSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL 548 L GP G GKT ++ + SE V + +G G Sbjct: 210 KGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSE-----LVQKYVGE-----GARMVRE 259 Query: 549 LTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAG 608 L + ++ DEI+ + D G + + +L Sbjct: 260 LFEMARTKKACLIFFDEID------------AIGGARFDDGAGGDNEVQRTML------- 300 Query: 609 VRETERKSIGLIHQDNSTDAMEEIK------KIFTPEFRNRLDNIIWFDHLSTDVIHQV 661 E + G + N M + + P +R D I ++ Sbjct: 301 --ELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKI 357 >4Z8X-A nrPDB Length = 497 Score = 94.1 bits (232), Expect = 2e-19, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 73/187 (39%), Gaps = 30/187 (16%) Query: 200 QVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKY 259 Q L R LL GE GVGKT +A+ +A + +D + +G+ Sbjct: 44 QKLGGRPPKGVLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAA------ 97 Query: 260 RGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAA---SGGQVDAANLIKPLL----- 311 R + L + ++ ++FIDEI + A A GG + + LL Sbjct: 98 ------RVRDLFETAKKHAPCMIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDG 151 Query: 312 --SSGKIRVIGSTTYQEFSNIFEKDRALAR--RF-QKIDITEPSIEETVQIINGLKPKYE 366 +S I VI +T + D AL R RF ++I I +P + +I+ + Sbjct: 152 FDTSDGIIVIAATNRPDI-----LDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKK 206 Query: 367 AHHDVRY 373 DV Sbjct: 207 LAKDVDL 213 Score = 42.9 bits (99), Expect = 5e-04, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 30/134 (22%) Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYME----------RHTVSRLIG 535 +P L G GVGKT + ++ + + S+++E R Sbjct: 49 RPPKGVLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKK 108 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLL---LDEIEKAHPDVFNILLQVMDNGTLTDNNGR 592 P + D+ DAV + A+ + DE E+ N LL MD +D Sbjct: 109 HAPCMIFIDE----IDAVGRARGAIPVGGGHDEREQT----LNQLLVEMDGFDTSDG--- 157 Query: 593 KADFRNVVLVMTTN 606 ++++ TN Sbjct: 158 ------IIVIAATN 165 >6EF0-H nrPDB Length = 257 Score = 93.7 bits (231), Expect = 3e-19, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 70/212 (33%), Gaps = 36/212 (16%) Query: 180 ARVGGIDPLIGREKELERAIQVLCRR-------RKNNPLLVGESGVGKTAIAEGLAWRIV 232 + VGG I + +E+ + R LL G G GKT A +A R Sbjct: 9 SDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANR-- 66 Query: 233 QGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIG 292 D T + L+ KY G+ + + L + I+F DEI + G Sbjct: 67 --------TDATFIRVIGSELVQ--KYVGEGARMVRELFEMARTKKACIIFFDEIDAVGG 116 Query: 293 AGAASGGQVDAA---------NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR--RF 341 A G D + G I+V+ +T D AL R R Sbjct: 117 ARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRP-----NTLDPALLRPGRI 171 Query: 342 -QKIDITEPSIEETVQIINGLKPKYEAHHDVR 372 +K++ + P +E I +R Sbjct: 172 DRKVEFSLPDLEGRANIFRIHSKSMSVERGIR 203 Score = 51.0 bits (120), Expect = 2e-06, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 74/251 (29%), Gaps = 53/251 (21%) Query: 437 PEKSVSQSD--RDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFA 494 P+ + S +D ++ L + +++ + + + A G+ L Sbjct: 4 PDVTYSDVGGCKDQIEKLREVVELPLLSPE----------RFATLGIDPPK----GILLY 49 Query: 495 GPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVI 554 GP G GKT ++ +R SE V + +G G L + Sbjct: 50 GPPGTGKTLCARAVANRTDATFIRVIGSE-----LVQKYVGE-----GARMVRELFEMAR 99 Query: 555 KHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETER 614 ++ DEI+ + D G + + +L E Sbjct: 100 TKKACIIFFDEID------------AVGGARFDDGAGGDNEVQRTML---------ELIT 138 Query: 615 KSIGLIHQDNSTDAMEEIK-KIFTPEFR--NRLDNIIWFDHLSTDVIHQVVDKFIVELQV 671 + G + N + P R+D + F + + + V Sbjct: 139 QLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSV 198 Query: 672 QLDQKGVSLEV 682 ++G+ E+ Sbjct: 199 ---ERGIRWEL 206 >6EF3-H nrPDB Length = 467 Score = 92.6 bits (228), Expect = 5e-19, Method: Composition-based stats. Identities = 51/271 (18%), Positives = 84/271 (30%), Gaps = 47/271 (17%) Query: 132 LDVVNFISHGTRKDEPTQSSDP----GSQPNSEEQAGGEERMENFTTNLN-------QLA 180 + F+ + PT + + + R++ T + + Sbjct: 150 KQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYS 209 Query: 181 RVGGIDPLIGREKELERAIQVLCRR-------RKNNPLLVGESGVGKTAIAEGLAWRIVQ 233 VGG I + +E+ + R LL G G GKT A +A R Sbjct: 210 DVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANR--- 266 Query: 234 GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGA 293 D T + L+ KY G+ + + L + I+F DEI + GA Sbjct: 267 -------TDATFIRVIGSELVQ--KYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGA 317 Query: 294 GAASGGQVDAA---------NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR--RF- 341 G D + G I+V+ +T D AL R R Sbjct: 318 RFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRP-----NTLDPALLRPGRID 372 Query: 342 QKIDITEPSIEETVQIINGLKPKYEAHHDVR 372 +K++ + P +E I +R Sbjct: 373 RKVEFSLPDLEGRANIFRIHSKSMSVERGIR 403 Score = 50.2 bits (118), Expect = 3e-06, Method: Composition-based stats. Identities = 37/264 (14%), Positives = 77/264 (29%), Gaps = 53/264 (20%) Query: 424 ADIESVVARIARIPEKSVSQSD--RDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGL 481 D + + P+ + S +D ++ L + +++ + + + A G+ Sbjct: 191 IDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPE----------RFATLGI 240 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYV 541 L GP G GKT ++ +R SE V + +G Sbjct: 241 DPPK----GILLYGPPGTGKTLCARAVANRTDATFIRVIGSE-----LVQKYVGE----- 286 Query: 542 GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVL 601 G L + ++ DEI+ + D G + + +L Sbjct: 287 GARMVRELFEMARTKKACIIFFDEID------------AVGGARFDDGAGGDNEVQRTML 334 Query: 602 VMTTNAGVRETERKSIGLIHQDNSTDAMEEIK-KIFTPEFR--NRLDNIIWFDHLSTDVI 658 E + G + N + P R+D + F + Sbjct: 335 ---------ELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGR 385 Query: 659 HQVVDKFIVELQVQLDQKGVSLEV 682 + + V ++G+ E+ Sbjct: 386 ANIFRIHSKSMSV---ERGIRWEL 406 >5M32-h nrPDB Length = 355 Score = 91.8 bits (226), Expect = 1e-18, Method: Composition-based stats. Identities = 52/236 (22%), Positives = 87/236 (36%), Gaps = 38/236 (16%) Query: 157 PNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAI-------QVLCRRRKNN 209 PN + +E + ++ +GG+D I KE+ + L + Sbjct: 91 PNKVDPLVSLMMVEKVPDSTYEM--IGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKG 148 Query: 210 PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKA 269 LL G G GKT +A +A DCT + L+ K+ G+ + + Sbjct: 149 VLLYGPPGTGKTLLARAVAHH----------TDCTFIRVSGSELVQ--KFIGEGARMVRE 196 Query: 270 LLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAA---------NLIKPLLSSGKIRVIG 320 L + SI+F+DEI +I + G D+ N + ++ I+VI Sbjct: 197 LFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIM 256 Query: 321 STTYQEFSNIFEKDRALAR--RF-QKIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 +T I D AL R R +KI+ P+ E + I+ K + Sbjct: 257 ATN-----RIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINL 307 Score = 51.4 bits (121), Expect = 1e-06, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 92/277 (33%), Gaps = 43/277 (15%) Query: 396 DKAIDVID-EAGARARLMPVSKRKKTV--NVADIESVVARIARIPEKSVSQSDRDTLKNL 452 DK ID+ D R L S + N D + + ++P+ + L Sbjct: 63 DKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIG--GLDKQ 120 Query: 453 GDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL 512 +K ++ K E G+ L GP G GKT + ++ Sbjct: 121 IKEIKEVIELPVKHPELF------EALGIAQPK----GVLLYGPPGTGKTLLARAVAHHT 170 Query: 513 GIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPD 572 +R SE V + IG G L +H +++ +DEI+ Sbjct: 171 DCTFIRVSGSE-----LVQKFIGE-----GARMVRELFVMAREHAPSIIFMDEIDS---- 216 Query: 573 VFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEI 632 + + L +G ++ + +L + E K+I +I N D ++ Sbjct: 217 --------IGSSRLEGGSGGDSEVQRTMLELLNQLDGFE-ATKNIKVIMATNRIDILDSA 267 Query: 633 KKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVEL 669 + P R+D I F + + ++ ++ Sbjct: 268 --LLRP---GRIDRKIEFPPPNEEARLDILKIHSRKM 299 >6EF0-L nrPDB Length = 273 Score = 91.4 bits (225), Expect = 1e-18, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 82/226 (36%), Gaps = 41/226 (18%) Query: 182 VGGIDPLIGREKELERAIQVLCR-------RRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 +GG+ I +E+ + LL G G GKT +A+ +A I Sbjct: 20 IGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGAN 79 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAG 294 + + KY G+ + + + ++ I+F+DE+ I G Sbjct: 80 FIFSPASG------------IVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRR 127 Query: 295 AASG--GQVDAANLIKPLLSS-------GKIRVIGSTTYQEFSNIFEKDRALAR--RF-Q 342 + G + + LL+ G+ ++I +T + D AL R R + Sbjct: 128 FSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDT-----LDPALLRPGRLDR 182 Query: 343 KIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKY 388 K++I P+ ++I K + + AAV+++ + Sbjct: 183 KVEIPLPNEAGRLEIFKIHTAKVKKTGEF-----DFEAAVKMSDGF 223 Score = 54.0 bits (128), Expect = 2e-07, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 59/188 (31%), Gaps = 35/188 (18%) Query: 429 VVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPV 488 +V + + ++ L L+ ++ K E R G+ Sbjct: 3 LVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIF------QRVGIKPPK--- 53 Query: 489 GSFLFAGPTGVGKTEVTVQLSKALGIELL----------RFDMSEYMERHTVSRLIGAPP 538 L GP G GKT + ++ +G + S + R + P Sbjct: 54 -GVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEP 112 Query: 539 GYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRN 598 + D+ DA+ + E A ++ L++++ DN G+ Sbjct: 113 CIIFMDE----VDAIGGRRFS-----EGTSADREIQRTLMELLTQMDGFDNLGQTK---- 159 Query: 599 VVLVMTTN 606 ++M TN Sbjct: 160 --IIMATN 165 >5GJQ-J nrPDB Length = 406 Score = 91.0 bits (224), Expect = 2e-18, Method: Composition-based stats. Identities = 52/236 (22%), Positives = 87/236 (36%), Gaps = 38/236 (16%) Query: 157 PNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAI-------QVLCRRRKNN 209 PN + +E + ++ +GG+D I KE+ + L + Sbjct: 128 PNKVDPLVSLMMVEKVPDSTYEM--IGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKG 185 Query: 210 PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKA 269 LL G G GKT +A +A DCT + L+ K+ G+ + + Sbjct: 186 VLLYGPPGTGKTLLARAVAHH----------TDCTFIRVSGSELVQ--KFIGEGARMVRE 233 Query: 270 LLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAA---------NLIKPLLSSGKIRVIG 320 L + SI+F+DEI +I + G D+ N + ++ I+VI Sbjct: 234 LFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIM 293 Query: 321 STTYQEFSNIFEKDRALAR--RF-QKIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 +T I D AL R R +KI+ P+ E + I+ K + Sbjct: 294 ATN-----RIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINL 344 Score = 51.0 bits (120), Expect = 2e-06, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 92/277 (33%), Gaps = 43/277 (15%) Query: 396 DKAIDVID-EAGARARLMPVSKRKKTV--NVADIESVVARIARIPEKSVSQSDRDTLKNL 452 DK ID+ D R L S + N D + + ++P+ + L Sbjct: 100 DKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIG--GLDKQ 157 Query: 453 GDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL 512 +K ++ K E G+ L GP G GKT + ++ Sbjct: 158 IKEIKEVIELPVKHPELF------EALGIAQPK----GVLLYGPPGTGKTLLARAVAHHT 207 Query: 513 GIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPD 572 +R SE V + IG G L +H +++ +DEI+ Sbjct: 208 DCTFIRVSGSE-----LVQKFIGE-----GARMVRELFVMAREHAPSIIFMDEIDS---- 253 Query: 573 VFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEI 632 + + L +G ++ + +L + E K+I +I N D ++ Sbjct: 254 --------IGSSRLEGGSGGDSEVQRTMLELLNQLDGFE-ATKNIKVIMATNRIDILDSA 304 Query: 633 KKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVEL 669 + P R+D I F + + ++ ++ Sbjct: 305 --LLRP---GRIDRKIEFPPPNEEARLDILKIHSRKM 336 >6EF2-J nrPDB Length = 262 Score = 90.6 bits (223), Expect = 2e-18, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 76/211 (36%), Gaps = 36/211 (17%) Query: 182 VGGIDPLIGREKELERAI-------QVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 VGG+ I KE+ + L + +L G G GKT +A +A Sbjct: 7 VGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHH---- 62 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAG 294 DC + L+ KY G+ + + L + SI+F+DEI +I Sbjct: 63 ------TDCKFIRVSGAELVQ--KYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTR 114 Query: 295 AASGGQVDAA---------NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR--RF-Q 342 G D+ N + +S I++I +T + D AL R R + Sbjct: 115 VEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDI-----LDPALLRPGRIDR 169 Query: 343 KIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 KI+ PS+ +I+ K + Sbjct: 170 KIEFPPPSVAARAEILRIHSRKMNLTRGINL 200 Score = 46.0 bits (107), Expect = 6e-05, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 68/190 (35%), Gaps = 32/190 (16%) Query: 480 GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPG 539 G+ + GP G GKT + ++ + +R +E V + IG Sbjct: 35 GIAQPK----GVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAE-----LVQKYIGE--- 82 Query: 540 YVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNV 599 G L +H +++ +DEI+ + + + + G ++ + Sbjct: 83 --GSRMVRELFVMAREHAPSIIFMDEIDS------------IGSTRVEGSGGGDSEVQRT 128 Query: 600 VLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659 +L + ET K+I +I N D ++ + P R+D I F S Sbjct: 129 MLELLNQLDGFETS-KNIKIIMATNRLDILDPA--LLRP---GRIDRKIEFPPPSVAARA 182 Query: 660 QVVDKFIVEL 669 +++ ++ Sbjct: 183 EILRIHSRKM 192 >6EF0-M nrPDB Length = 258 Score = 90.3 bits (222), Expect = 3e-18, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 74/212 (34%), Gaps = 36/212 (16%) Query: 180 ARVGGIDPLIGREKELERAIQV-------LCRRRKNNPLLVGESGVGKTAIAEGLAWRIV 232 + VGG+D I E + R L+ G G GKT +A A + Sbjct: 6 SDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQ-- 63 Query: 233 QGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTI-- 290 + T L L+ Y G+ K + ++ +I+FIDE+ I Sbjct: 64 --------TNATFLKLAAPQLVQM--YIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGT 113 Query: 291 -------IGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR--RF 341 G ++ N + S +++V+ +T + D AL R R Sbjct: 114 KRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATN-----RVDVLDPALLRSGRL 168 Query: 342 -QKIDITEPSIEETVQIINGLKPKYEAHHDVR 372 +KI+ PS + QI+ K D+ Sbjct: 169 DRKIEFPLPSEDSRAQILQIHSRKMTTDDDIN 200 Score = 40.6 bits (93), Expect = 0.003, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 64/193 (33%), Gaps = 35/193 (18%) Query: 460 VFGQDKAIEALTEAIK--MARA------GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKA 511 V G DK IE L EAI M RA G+ L GP G GKT + + Sbjct: 8 VGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPK----GALMYGPPGTGKTLLARACAAQ 63 Query: 512 LGIELLR----------FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVL 561 L+ + R + P + D+ DA+ Sbjct: 64 TNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDE----LDAIGTKR---- 115 Query: 562 LLDEIEKAHPDVFNILLQVMD--NGTLTDNNGRKADFRNVVLVMTTNA--GVRETERKSI 617 D + +V +L++++ +G +D+ + N V V+ R + Sbjct: 116 -FDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEF 174 Query: 618 GLIHQDNSTDAME 630 L +D+ ++ Sbjct: 175 PLPSEDSRAQILQ 187 >5VHN-D nrPDB Length = 262 Score = 89.9 bits (221), Expect = 4e-18, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 77/215 (35%), Gaps = 36/215 (16%) Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKN-------NPLLVGESGVGKTAIAEGLAWRIV 232 A +GG+D +E K L+ G G GKT +A+ +A Sbjct: 21 ADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 80 Query: 233 QGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIG 292 + V KY G+ + + + + +++ +I+FIDEI I Sbjct: 81 AAFIRVV--GSEFVQ----------KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIAT 128 Query: 293 AG--AASGGQVDAANLIKPLLS-------SGKIRVIGSTTYQEFSNIFEKDRALAR--RF 341 A +G + ++ LL+ + ++VI +T + D AL R R Sbjct: 129 KRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADT-----LDPALLRPGRL 183 Query: 342 -QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTA 375 +KI+ P + I + + K +V Sbjct: 184 DRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLED 218 Score = 52.5 bits (124), Expect = 7e-07, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 47/130 (36%), Gaps = 25/130 (19%) Query: 487 PVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHT----------VSRLIGA 536 P L GP G GKT + ++ +R SE+++++ Sbjct: 54 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN 113 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 P + D+ DA+ D A +V ILL++++ D + Sbjct: 114 APAIIFIDE----IDAIATKR-----FDAQTGADREVQRILLELLNQ---MDGFDQNV-- 159 Query: 597 RNVVLVMTTN 606 NV ++M TN Sbjct: 160 -NVKVIMATN 168 >5VHP-C nrPDB Length = 266 Score = 89.5 bits (220), Expect = 5e-18, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 79/211 (37%), Gaps = 36/211 (17%) Query: 182 VGGIDPLIGREKELERAI-------QVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 +GG+D I KE+ + L + LL G G GKT +A +A Sbjct: 22 IGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH---- 77 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAG 294 DCT + L+ K+ G+ + + L + SI+F+DEI +I + Sbjct: 78 ------TDCTFIRVSGSELVQ--KFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 129 Query: 295 AASGGQVDAA---------NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR--RF-Q 342 G D+ N + ++ I+VI +T I D AL R R + Sbjct: 130 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATN-----RIDILDSALLRPGRIDR 184 Query: 343 KIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 KI+ P+ E + I+ K + Sbjct: 185 KIEFPPPNEEARLDILKIHSRKMNLTRGINL 215 Score = 50.6 bits (119), Expect = 2e-06, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 82/229 (35%), Gaps = 40/229 (17%) Query: 449 LKNLGDRLKMLVFGQDKAIEALTEAIKM--------ARAGLGHEHKPVGSFLFAGPTGVG 500 ++ + D ++ G DK I+ + E I++ G+ L GP G G Sbjct: 11 VEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPK----GVLLYGPPGTG 66 Query: 501 KTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAV 560 KT + ++ +R SE V + IG G L +H ++ Sbjct: 67 KTLLARAVAHHTDCTFIRVSGSE-----LVQKFIGE-----GARMVRELFVMAREHAPSI 116 Query: 561 LLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLI 620 + +DEI+ + + L +G ++ + +L + E K+I +I Sbjct: 117 IFMDEIDS------------IGSSRLEGGSGGDSEVQRTMLELLNQLDGFE-ATKNIKVI 163 Query: 621 HQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVEL 669 N D ++ + P R+D I F + + ++ ++ Sbjct: 164 MATNRIDILDSA--LLRP---GRIDRKIEFPPPNEEARLDILKIHSRKM 207 >5VFP-F nrPDB Length = 396 Score = 89.5 bits (220), Expect = 5e-18, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 81/237 (34%), Gaps = 36/237 (15%) Query: 156 QPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAI-------QVLCRRRKN 208 + E + ME Q + +GG+D I E + L + Sbjct: 119 ETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPK 178 Query: 209 NPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFK 268 L+ G G GKT +A A + T L L+ + GD K + Sbjct: 179 GVLMYGPPGTGKTLLARACAAQ----------TKATFLKLAGPQLVQM--FIGDGAKLVR 226 Query: 269 ALLKQLEQDTNSILFIDEIHTI---------IGAGAASGGQVDAANLIKPLLSSGKIRVI 319 ++ SI+FIDE+ I G ++ N + + +++VI Sbjct: 227 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVI 286 Query: 320 GSTTYQEFSNIFEKDRALAR--RF-QKIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 +T + D AL R R +KI+ P+ E +I+ K DV Y Sbjct: 287 AATNRVDI-----LDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNY 338 Score = 42.1 bits (97), Expect = 9e-04, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 21/130 (16%) Query: 486 KPVGSFLFAGPTGVGKTEVTVQLS--------KALGIELLR--FDMSEYMERHTVSRLIG 535 +P L GP G GKT + + K G +L++ + R + Sbjct: 175 QPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKE 234 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD--NGTLTDNNGRK 593 P + D+ DA+ D + +V +L++++ +G + + Sbjct: 235 KAPSIIFIDE----LDAIGTKR-----FDSEKAGDREVQRTMLELLNQLDGFQPNTQVKV 285 Query: 594 ADFRNVVLVM 603 N V ++ Sbjct: 286 IAATNRVDIL 295 >3JCP-I nrPDB Length = 437 Score = 89.5 bits (220), Expect = 5e-18, Method: Composition-based stats. Identities = 51/233 (21%), Positives = 86/233 (36%), Gaps = 38/233 (16%) Query: 160 EEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAI-------QVLCRRRKNNPLL 212 + +M+ T + +GG++ I KE + + + +L Sbjct: 164 ADPMVSVMKMDKSPTE--SYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVIL 221 Query: 213 VGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLK 272 G G GKT +A+ +A + T + L+ KY GD + + + K Sbjct: 222 YGAPGTGKTLLAKAVANQ----------TSATFLRIVGSELIQ--KYLGDGPRLCRQIFK 269 Query: 273 QLEQDTNSILFIDEIHTIIGAG--AASGGQ-------VDAANLIKPLLSSGKIRVIGSTT 323 ++ SI+FIDEI I + SGG+ ++ N + G ++VI +T Sbjct: 270 VAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATN 329 Query: 324 YQEFSNIFEKDRALAR--RF-QKIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 E D AL R R +KI P + +I+ K DV Sbjct: 330 KIET-----LDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNL 377 Score = 44.4 bits (103), Expect = 2e-04, Method: Composition-based stats. Identities = 50/323 (15%), Positives = 106/323 (32%), Gaps = 56/323 (17%) Query: 375 AKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA-RARLMPVSKRKKTVNVADIESVVARI 433 A+ + + Y++ DK ++++ + +S + AD V ++ Sbjct: 116 DHAIVTSPTMPDYYVSILSFVDK--ELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKM 173 Query: 434 ARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLF 493 + P +S S L++ +K V E E G+ + Sbjct: 174 DKSPTESYSDIG--GLESQIQEIKESVELPLTHPELYEE------MGIKPPK----GVIL 221 Query: 494 AGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPP--GYVGFDQGGLLTD 551 G G GKT + ++ LR SE + + +G P F G Sbjct: 222 YGAPGTGKTLLAKAVANQTSATFLRIVGSE-----LIQKYLGDGPRLCRQIFKVAGE--- 273 Query: 552 AVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRE 611 + +++ +DEI+ + N+G + + + +L E Sbjct: 274 ----NAPSIVFIDEID------------AIGTKRYDSNSGGEREIQRTML---------E 308 Query: 612 TERKSIGLIHQDNSTDAMEEIK-KIFTPEFR--NRLDNIIWFDHLSTDVIHQVVDKFIVE 668 + G + + M K + P R+D I F++ +++ + Sbjct: 309 LLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSK 368 Query: 669 LQVQLDQKGVSLEVSQEARNWLA 691 + L + V+LE ++ L+ Sbjct: 369 MN--LSE-DVNLETLVTTKDDLS 388 >6FVU-I nrPDB Length = 384 Score = 89.1 bits (219), Expect = 6e-18, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 82/233 (35%), Gaps = 38/233 (16%) Query: 160 EEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAI-------QVLCRRRKNNPLL 212 + +M+ T + +GG++ I KE + + + +L Sbjct: 111 ADPMVSVMKMDKSPTE--SYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVIL 168 Query: 213 VGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLK 272 G G GKT +A+ +A + T + L+ KY GD + + + K Sbjct: 169 YGAPGTGKTLLAKAVANQ----------TSATFLRIVGSELIQ--KYLGDGPRLCRQIFK 216 Query: 273 QLEQDTNSILFIDEIHTI---------IGAGAASGGQVDAANLIKPLLSSGKIRVIGSTT 323 ++ SI+FIDEI I G ++ N + G ++VI +T Sbjct: 217 VAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATN 276 Query: 324 YQEFSNIFEKDRALAR--RF-QKIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 E D AL R R +KI P + +I+ K DV Sbjct: 277 KIET-----LDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNL 324 Score = 44.4 bits (103), Expect = 2e-04, Method: Composition-based stats. Identities = 50/323 (15%), Positives = 106/323 (32%), Gaps = 56/323 (17%) Query: 375 AKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA-RARLMPVSKRKKTVNVADIESVVARI 433 A+ + + Y++ DK ++++ + +S + AD V ++ Sbjct: 63 DHAIVTSPTMPDYYVSILSFVDK--ELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKM 120 Query: 434 ARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLF 493 + P +S S L++ +K V E E G+ + Sbjct: 121 DKSPTESYSDIG--GLESQIQEIKESVELPLTHPELYEE------MGIKPPK----GVIL 168 Query: 494 AGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPP--GYVGFDQGGLLTD 551 G G GKT + ++ LR SE + + +G P F G Sbjct: 169 YGAPGTGKTLLAKAVANQTSATFLRIVGSE-----LIQKYLGDGPRLCRQIFKVAGE--- 220 Query: 552 AVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRE 611 + +++ +DEI+ + N+G + + + +L E Sbjct: 221 ----NAPSIVFIDEID------------AIGTKRYDSNSGGEREIQRTML---------E 255 Query: 612 TERKSIGLIHQDNSTDAMEEIK-KIFTPEFR--NRLDNIIWFDHLSTDVIHQVVDKFIVE 668 + G + + M K + P R+D I F++ +++ + Sbjct: 256 LLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSK 315 Query: 669 LQVQLDQKGVSLEVSQEARNWLA 691 + L + V+LE ++ L+ Sbjct: 316 MN--LSE-DVNLETLVTTKDDLS 335 >6EPD-M nrPDB Length = 442 Score = 88.7 bits (218), Expect = 7e-18, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 81/237 (34%), Gaps = 36/237 (15%) Query: 156 QPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAI-------QVLCRRRKN 208 + E + ME Q + +GG+D I E + L + Sbjct: 165 ETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPK 224 Query: 209 NPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFK 268 L+ G G GKT +A A + T L L+ + GD K + Sbjct: 225 GVLMYGPPGTGKTLLARACAAQ----------TKATFLKLAGPQLVQM--FIGDGAKLVR 272 Query: 269 ALLKQLEQDTNSILFIDEIHTI---------IGAGAASGGQVDAANLIKPLLSSGKIRVI 319 ++ SI+FIDE+ I G ++ N + + +++VI Sbjct: 273 DAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVI 332 Query: 320 GSTTYQEFSNIFEKDRALAR--RF-QKIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 +T + D AL R R +KI+ P+ E +I+ K DV Y Sbjct: 333 AATNRVDI-----LDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNY 384 Score = 41.7 bits (96), Expect = 0.001, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 21/130 (16%) Query: 486 KPVGSFLFAGPTGVGKTEVTVQLS--------KALGIELLR--FDMSEYMERHTVSRLIG 535 +P L GP G GKT + + K G +L++ + R + Sbjct: 221 QPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKE 280 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD--NGTLTDNNGRK 593 P + D+ DA+ D + +V +L++++ +G + + Sbjct: 281 KAPSIIFIDE----LDAIGTKR-----FDSEKAGDREVQRTMLELLNQLDGFQPNTQVKV 331 Query: 594 ADFRNVVLVM 603 N V ++ Sbjct: 332 IAATNRVDIL 341 >3JCO-J nrPDB Length = 405 Score = 88.7 bits (218), Expect = 8e-18, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 76/211 (36%), Gaps = 36/211 (17%) Query: 182 VGGIDPLIGREKELERAI-------QVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 VGG+ I KE+ + L + +L G G GKT +A +A Sbjct: 150 VGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHH---- 205 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAG 294 DC + L+ KY G+ + + L + SI+F+DEI +I Sbjct: 206 ------TDCKFIRVSGAELVQ--KYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTR 257 Query: 295 AASGGQVDAA---------NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR--RF-Q 342 G D+ N + +S I++I +T + D AL R R + Sbjct: 258 VEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDI-----LDPALLRPGRIDR 312 Query: 343 KIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 KI+ PS+ +I+ K + Sbjct: 313 KIEFPPPSVAARAEILRIHSRKMNLTRGINL 343 Score = 47.9 bits (112), Expect = 2e-05, Method: Composition-based stats. Identities = 57/300 (19%), Positives = 105/300 (35%), Gaps = 46/300 (15%) Query: 373 YTAKAVRAAVELAVKYINDRHLPDKAIDVID-EAGARARLMPVSKRKKTV--NVADIESV 429 + K V V+ KYI D K I+V D +A R L S V N AD Sbjct: 79 VSDKKVLVKVQPEGKYIVD---VAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVS 135 Query: 430 VARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVG 489 + + ++P+ + L +K ++ K E G+ Sbjct: 136 LMMVEKVPDSTYDMVG--GLTKQIKEIKEVIELPVKHPELFES------LGIAQPK---- 183 Query: 490 SFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLL 549 + GP G GKT + ++ + +R +E V + IG G L Sbjct: 184 GVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAEL-----VQKYIGE-----GSRMVREL 233 Query: 550 TDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGV 609 +H +++ +DEI+ + + + + G ++ + +L + Sbjct: 234 FVMAREHAPSIIFMDEIDS------------IGSTRVEGSGGGDSEVQRTMLELLNQLDG 281 Query: 610 RETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVEL 669 ET K+I +I N D ++ + P R+D I F S +++ ++ Sbjct: 282 FETS-KNIKIIMATNRLDILDPA--LLRP---GRIDRKIEFPPPSVAARAEILRIHSRKM 335 >5A5B-M nrPDB Length = 434 Score = 88.7 bits (218), Expect = 9e-18, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 74/212 (34%), Gaps = 36/212 (16%) Query: 180 ARVGGIDPLIGREKELERAIQV-------LCRRRKNNPLLVGESGVGKTAIAEGLAWRIV 232 + VGG+D I E + R L+ G G GKT +A A + Sbjct: 181 SDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQ-- 238 Query: 233 QGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTI-- 290 + T L L+ Y G+ K + ++ +I+FIDE+ I Sbjct: 239 --------TNATFLKLAAPQLVQM--YIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGT 288 Query: 291 -------IGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR--RF 341 G ++ N + S +++V+ +T + D AL R R Sbjct: 289 KRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATN-----RVDVLDPALLRSGRL 343 Query: 342 -QKIDITEPSIEETVQIINGLKPKYEAHHDVR 372 +KI+ PS + QI+ K D+ Sbjct: 344 DRKIEFPLPSEDSRAQILQIHSRKMTTDDDIN 375 Score = 39.4 bits (90), Expect = 0.006, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 64/193 (33%), Gaps = 35/193 (18%) Query: 460 VFGQDKAIEALTEAIK--MARA------GLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKA 511 V G DK IE L EAI M RA G+ L GP G GKT + + Sbjct: 183 VGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPK----GALMYGPPGTGKTLLARACAAQ 238 Query: 512 LGIELLR----------FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVL 561 L+ + R + P + D+ DA+ Sbjct: 239 TNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDE----LDAIGTKR---- 290 Query: 562 LLDEIEKAHPDVFNILLQVMD--NGTLTDNNGRKADFRNVVLVMTTNA--GVRETERKSI 617 D + +V +L++++ +G +D+ + N V V+ R + Sbjct: 291 -FDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEF 349 Query: 618 GLIHQDNSTDAME 630 L +D+ ++ Sbjct: 350 PLPSEDSRAQILQ 362 >5VHO-F nrPDB Length = 267 Score = 88.3 bits (217), Expect = 1e-17, Method: Composition-based stats. Identities = 47/215 (21%), Positives = 76/215 (35%), Gaps = 36/215 (16%) Query: 178 QLARVGGIDPLIGREKELERAI-------QVLCRRRKNNPLLVGESGVGKTAIAEGLAWR 230 Q + +GG+D I E + L + L+ G G GKT +A A + Sbjct: 19 QYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQ 78 Query: 231 IVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTI 290 T L L+ + GD K + ++ SI+FIDE+ I Sbjct: 79 ----------TKATFLKLAGPQLVQM--FIGDGAKLVRDAFALAKEKAPSIIFIDELDAI 126 Query: 291 ---------IGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR-- 339 G ++ N + + +++VI +T + D AL R Sbjct: 127 GTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDI-----LDPALLRSG 181 Query: 340 RF-QKIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 R +KI+ P+ E +I+ K DV Y Sbjct: 182 RLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNY 216 Score = 42.1 bits (97), Expect = 8e-04, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 21/130 (16%) Query: 486 KPVGSFLFAGPTGVGKTEVTVQLS--------KALGIELLR--FDMSEYMERHTVSRLIG 535 +P L GP G GKT + + K G +L++ + R + Sbjct: 53 QPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKE 112 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMD--NGTLTDNNGRK 593 P + D+ DA+ D + +V +L++++ +G + + Sbjct: 113 KAPSIIFIDE----LDAIGTKR-----FDSEKAGDREVQRTMLELLNQLDGFQPNTQVKV 163 Query: 594 ADFRNVVLVM 603 N V ++ Sbjct: 164 IAATNRVDIL 173 >6FVU-L nrPDB Length = 388 Score = 88.3 bits (217), Expect = 1e-17, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 82/226 (36%), Gaps = 41/226 (18%) Query: 182 VGGIDPLIGREKELERAIQVLCR-------RRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 +GG+ I +E+ + LL G G GKT +A+ +A I Sbjct: 135 IGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGAN 194 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAG 294 + + KY G+ + + + ++ I+F+DE+ I G Sbjct: 195 FIFSPASG------------IVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRR 242 Query: 295 AASG--GQVDAANLIKPLLSS-------GKIRVIGSTTYQEFSNIFEKDRALAR--RF-Q 342 + G + + LL+ G+ ++I +T + D AL R R + Sbjct: 243 FSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDT-----LDPALLRPGRLDR 297 Query: 343 KIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKY 388 K++I P+ ++I K + + AAV+++ + Sbjct: 298 KVEIPLPNEAGRLEIFKIHTAKVKKTGEF-----DFEAAVKMSDGF 338 Score = 54.8 bits (130), Expect = 1e-07, Method: Composition-based stats. Identities = 44/293 (15%), Positives = 87/293 (29%), Gaps = 42/293 (14%) Query: 326 EFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDV--RYTAKAVRAAVE 383 E D L +R Q I E ++T I L+ + +V + + Sbjct: 18 EHRRY---DDQLKQRRQNIRDLEKLYDKTENDIKALQSIGQLIGEVMKELSEEKYIVKAS 74 Query: 384 LAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQ 443 +YI + + ++ + D +V + + ++ Sbjct: 75 SGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDP--LVYNMTSFEQGEITF 132 Query: 444 SDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTE 503 L L+ ++ K E R G+ L GP G GKT Sbjct: 133 DGIGGLTEQIRELREVIELPLKNPEIF------QRVGIKPPK----GVLLYGPPGTGKTL 182 Query: 504 VTVQLSKALGIELL----------RFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAV 553 + ++ +G + S + R + P + D+ DA+ Sbjct: 183 LAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDE----VDAI 238 Query: 554 IKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN 606 + E A ++ L++++ DN G+ ++M TN Sbjct: 239 GGRRFS-----EGTSADREIQRTLMELLTQMDGFDNLGQTK------IIMATN 280 >5KWA-A nrPDB Length = 497 Score = 87.9 bits (216), Expect = 2e-17, Method: Composition-based stats. Identities = 70/368 (19%), Positives = 132/368 (35%), Gaps = 42/368 (11%) Query: 117 ESQAAYLLRKHEVSRLDVVN--FISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTT 174 + A ++ + R+ + I G RK P S ++ + + +E+ Sbjct: 79 DGHRALVVGHADEERVVWLADPLIGGGPRKLRPGDSLLVDTKAGYAFERIPKAEVEDLVL 138 Query: 175 NLN---QLARVGGIDPLIGREKELERAIQV----------LCRRRKNNPLLVGESGVGKT 221 A +GG+ I +++ A+++ R LL G G GKT Sbjct: 139 EEVPDVSYADIGGLSRQI---EQIRDAVELPFLHKELYREYSLRPPKGVLLYGPPGCGKT 195 Query: 222 AIAEGLAWRIVQGDVP---EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT 278 IA+ +A + + + + Y L+I K+ G+ E+ + + ++ + Sbjct: 196 LIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKA 255 Query: 279 ----NSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS-------GKIRVIGSTTYQEF 327 I+F DE+ +I ++ LLS + VIG++ ++ Sbjct: 256 SEGTPVIVFFDEMDSIFRTRGTGVSSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDM 315 Query: 328 SNIFEKDRALAR--RFQ-KIDITEPSIEETVQII-NGLKPKYEAHH-DVRYTAKAVRAAV 382 D A+ R R KI I P E I L H D+ A + Sbjct: 316 -----IDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTEFLPVHADDLAEFDGDRSACI 370 Query: 383 ELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVS 442 + ++ + DR + + E V K + A I++VV R + KSV Sbjct: 371 KAMIEKVVDRMYAEIDDNRFLEVTYANGDKEVMYFKDFNSGAMIQNVVDRAKKNAIKSVL 430 Query: 443 QSDRDTLK 450 ++ + L+ Sbjct: 431 ETGQPGLR 438 Score = 48.7 bits (114), Expect = 1e-05, Method: Composition-based stats. Identities = 57/340 (16%), Positives = 125/340 (36%), Gaps = 40/340 (11%) Query: 431 ARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKM----ARAGLGHEHK 486 RIP ++ + L+ + D + G + IE + +A+++ + + Sbjct: 123 YAFERIP---KAEVEDLVLEEVPDVSYADIGGLSRQIEQIRDAVELPFLHKELYREYSLR 179 Query: 487 PVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPP---GYVGF 543 P L GP G GKT + ++ +L ++ + E + I P +VG Sbjct: 180 PPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGE 239 Query: 544 DQG------GLLTDAVIKHPHAVLLLDEIEK--------AHPDVFNILLQVMDNGTLTDN 589 + + + ++ DE++ DV ++ + L++ Sbjct: 240 TERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETTVVPQL----LSEI 295 Query: 590 NGRKADFRNVVLVMTTNA------GVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRN- 642 +G + NV+++ +N + R + + + +A ++I + EF Sbjct: 296 DGVE-GLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTEFLPV 354 Query: 643 RLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGAR 702 D++ FD + I +++K + + ++D LEV+ + D GA Sbjct: 355 HADDLAEFDGDRSACIKAMIEKVVDRMYAEIDDNRF-LEVTYANGDKEVMYFKDFNSGAM 413 Query: 703 PMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNEL 742 + V+ K + + L G G ++ LD +E Sbjct: 414 -IQNVVDRAKKNAIKSVLETGQ--PGLRIQHLLDSIVDEF 450 >5T0C-AD nrPDB Length = 418 Score = 87.6 bits (215), Expect = 2e-17, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 77/215 (35%), Gaps = 36/215 (16%) Query: 180 ARVGGIDPLIGREKELERAIQVLCRRRKN-------NPLLVGESGVGKTAIAEGLAWRIV 232 A +GG+D +E K L+ G G GKT +A+ +A Sbjct: 165 ADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 224 Query: 233 QGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIG 292 + V KY G+ + + + + +++ +I+FIDEI I Sbjct: 225 AAFIRVV--GSEFVQ----------KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIAT 272 Query: 293 AG--AASGGQVDAANLIKPLLS-------SGKIRVIGSTTYQEFSNIFEKDRALAR--RF 341 A +G + ++ LL+ + ++VI +T + D AL R R Sbjct: 273 KRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADT-----LDPALLRPGRL 327 Query: 342 -QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTA 375 +KI+ P + I + + K +V Sbjct: 328 DRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLED 362 Score = 51.4 bits (121), Expect = 2e-06, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 47/130 (36%), Gaps = 25/130 (19%) Query: 487 PVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHT----------VSRLIGA 536 P L GP G GKT + ++ +R SE+++++ Sbjct: 198 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN 257 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 P + D+ DA+ D A +V ILL++++ D + Sbjct: 258 APAIIFIDE----IDAIATKR-----FDAQTGADREVQRILLELLNQ---MDGFDQNV-- 303 Query: 597 RNVVLVMTTN 606 NV ++M TN Sbjct: 304 -NVKVIMATN 312 >6AZ0-A nrPDB Length = 439 Score = 87.6 bits (215), Expect = 2e-17, Method: Composition-based stats. Identities = 44/206 (21%), Positives = 69/206 (33%), Gaps = 32/206 (15%) Query: 181 RVGGIDPLIGREKELERAI------QVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 V G D +E+ + + L + LL G G GKT +A A Sbjct: 4 DVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGEAGVD 63 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAG 294 M+ + Y G KR + L Q +I+FID++ I G Sbjct: 64 FF--FMSGSEFDEV----------YVGVGAKRIRDLFAQARSRAPAIIFIDQLDAIGGKR 111 Query: 295 AASGGQVDAANL------IKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR--RFQK-ID 345 L + + I +IG+T + E D+AL R RF K ++ Sbjct: 112 NPKDQAYAKQTLNQLLVELDGFSQTSGIIIIGATNFPEA-----LDKALTRPGRFDKVVN 166 Query: 346 ITEPSIEETVQIINGLKPKYEAHHDV 371 + P + I+ K +V Sbjct: 167 VDLPDVRGRADILKHHMKKITLADNV 192 Score = 44.0 bits (102), Expect = 2e-04, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 66/210 (31%), Gaps = 42/210 (20%) Query: 464 DKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSE 523 ++ ++ L + K G L GP G GKT + + G++ SE Sbjct: 16 EEIVDFLKDPTKYESLGGKLPK----GVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSE 71 Query: 524 YME----------RHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDV 573 + E R ++ P + DQ DA+ + + + Sbjct: 72 FDEVYVGVGAKRIRDLFAQARSRAPAIIFIDQ----LDAIGGKRNP-----KDQAYAKQT 122 Query: 574 FNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIK 633 N LL +D + T ++++ TN L +++ Sbjct: 123 LNQLLVELDGFSQTSG---------IIIIGATNF--------PEALDKALTRPGRFDKVV 165 Query: 634 KIFTPEFRNRLDNIIWFDHLSTDVIHQVVD 663 + P+ R R D I H+ + VD Sbjct: 166 NVDLPDVRGRAD--ILKHHMKKITLADNVD 193 >5WVI-L nrPDB Length = 437 Score = 87.6 bits (215), Expect = 2e-17, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 82/226 (36%), Gaps = 41/226 (18%) Query: 182 VGGIDPLIGREKELERAIQVLCR-------RRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 +GG+ I +E+ + LL G G GKT +A+ +A I Sbjct: 183 IGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGAN 242 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAG 294 + + KY G+ + + + ++ I+F+DE+ I G Sbjct: 243 FIFSPASG------------IVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRR 290 Query: 295 AASG--GQVDAANLIKPLLSS-------GKIRVIGSTTYQEFSNIFEKDRALAR--RF-Q 342 + G + + LL+ G+ ++I +T + D AL R R + Sbjct: 291 FSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDT-----LDPALLRPGRLDR 345 Query: 343 KIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKY 388 K++I P+ ++I K + + AAV+++ + Sbjct: 346 KVEIPLPNEAGRLEIFKIHTAKVKKTGEF-----DFEAAVKMSDGF 386 Score = 54.0 bits (128), Expect = 2e-07, Method: Composition-based stats. Identities = 44/293 (15%), Positives = 87/293 (29%), Gaps = 42/293 (14%) Query: 326 EFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDV--RYTAKAVRAAVE 383 E D L +R Q I E ++T I L+ + +V + + Sbjct: 66 EHRRY---DDQLKQRRQNIRDLEKLYDKTENDIKALQSIGQLIGEVMKELSEEKYIVKAS 122 Query: 384 LAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQ 443 +YI + + ++ + D +V + + ++ Sbjct: 123 SGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDP--LVYNMTSFEQGEITF 180 Query: 444 SDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTE 503 L L+ ++ K E R G+ L GP G GKT Sbjct: 181 DGIGGLTEQIRELREVIELPLKNPEIF------QRVGIKPPK----GVLLYGPPGTGKTL 230 Query: 504 VTVQLSKALGIELL----------RFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAV 553 + ++ +G + S + R + P + D+ DA+ Sbjct: 231 LAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDE----VDAI 286 Query: 554 IKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN 606 + E A ++ L++++ DN G+ ++M TN Sbjct: 287 GGRRFS-----EGTSADREIQRTLMELLTQMDGFDNLGQTK------IIMATN 328 >2DHR-A nrPDB Length = 499 Score = 87.6 bits (215), Expect = 2e-17, Method: Composition-based stats. Identities = 52/251 (20%), Positives = 92/251 (36%), Gaps = 43/251 (17%) Query: 202 LCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRG 261 + R LLVG GVGKT +A +A + +D + +G+ Sbjct: 59 MGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAA-------- 110 Query: 262 DFEKRFKALLKQLEQDTNSILFIDEIHTI-----IGAGAASGGQVDAANLIKPLLSSGK- 315 R + L + ++ I+FIDEI + G G + + N + + + Sbjct: 111 ----RVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEK 166 Query: 316 ---IRVIGSTTYQEFSNIFEKDRALAR--RF-QKIDITEPSIEETVQIINGLKPKYEAHH 369 I V+ +T + D AL R RF ++I I P ++ QI+ Sbjct: 167 DTAIVVMAATNRPDI-----LDPALLRPGRFDRQIAIDAPDVKGREQILR---------- 211 Query: 370 DVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESV 429 A+ A ++ + + R D+ + A L R+K + + D+E Sbjct: 212 ---IHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRK-ITMKDLEEA 267 Query: 430 VARIARIPEKS 440 R+ +P K Sbjct: 268 ADRVMMLPAKK 278 Score = 40.6 bits (93), Expect = 0.003, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 41/126 (32%), Gaps = 20/126 (15%) Query: 467 IEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYME 526 +E L + G L GP GVGKT + ++ + + S+++E Sbjct: 47 VEFLKNPSRFHEMGARIPK----GVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVE 102 Query: 527 ----------RHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNI 576 R P V D+ DAV + + + E+ N Sbjct: 103 MFVGVGAARVRDLFETAKRHAPCIVFIDE----IDAVGRKRGSGVGGGNDER--EQTLNQ 156 Query: 577 LLQVMD 582 LL MD Sbjct: 157 LLVEMD 162 >6EF1-I nrPDB Length = 271 Score = 86.8 bits (213), Expect = 3e-17, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 81/225 (36%), Gaps = 38/225 (16%) Query: 168 RMENFTTNLNQLARVGGIDPLIGREKELERAI-------QVLCRRRKNNPLLVGESGVGK 220 +M+ T + +GG++ I KE + + + +L G G GK Sbjct: 6 KMDKSPTE--SYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGK 63 Query: 221 TAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS 280 T +A+ +A + T + L+ KY GD + + + K ++ S Sbjct: 64 TLLAKAVANQ----------TSATFLRIVGSELIQ--KYLGDGPRLCRQIFKVAGENAPS 111 Query: 281 ILFIDEIHTI---------IGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIF 331 I+FIDEI I G ++ N + G ++VI +T E Sbjct: 112 IVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIET---- 167 Query: 332 EKDRALAR--RF-QKIDITEPSIEETVQIINGLKPKYEAHHDVRY 373 D AL R R +KI P + +I+ K DV Sbjct: 168 -LDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNL 211 Score = 42.5 bits (98), Expect = 6e-04, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 61/189 (32%), Gaps = 38/189 (20%) Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPP--GYVGF 543 KP + G G GKT + ++ LR SE + + +G P F Sbjct: 48 KPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSEL-----IQKYLGDGPRLCRQIF 102 Query: 544 DQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVM 603 G + +++ +DEI+ + N+G + + + +L Sbjct: 103 KVAGE-------NAPSIVFIDEID------------AIGTKRYDSNSGGEREIQRTML-- 141 Query: 604 TTNAGVRETERKSIGLIHQDNSTDAMEEIK-KIFTPEFR--NRLDNIIWFDHLSTDVIHQ 660 E + G + + M K + P R+D I F++ + Sbjct: 142 -------ELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKK 194 Query: 661 VVDKFIVEL 669 ++ ++ Sbjct: 195 ILGIHTSKM 203 >1IY1-A nrPDB Length = 254 Score = 86.8 bits (213), Expect = 3e-17, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 68/185 (36%), Gaps = 29/185 (15%) Query: 202 LCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRG 261 + R LLVG GVGKT +A +A + +D + +G+ Sbjct: 44 MGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAA-------- 95 Query: 262 DFEKRFKALLKQLEQDTNSILFIDEIHTI-----IGAGAASGGQVDAANLIKPLLSSGK- 315 R + L + ++ I+FIDEI + G G + + N + + + Sbjct: 96 ----RVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEK 151 Query: 316 ---IRVIGSTTYQEFSNIFEKDRALAR--RF-QKIDITEPSIEETVQIINGLKPKYEAHH 369 I V+ +T + D AL R RF ++I I P ++ QI+ Sbjct: 152 DTAIVVMAATNRPDI-----LDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLAE 206 Query: 370 DVRYT 374 DV Sbjct: 207 DVDLA 211 Score = 41.3 bits (95), Expect = 0.002, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 41/126 (32%), Gaps = 20/126 (15%) Query: 467 IEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYME 526 +E L + G L GP GVGKT + ++ + + S+++E Sbjct: 32 VEFLKNPSRFHEMGARIPK----GVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVE 87 Query: 527 ----------RHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNI 576 R P V D+ DAV + + + E+ N Sbjct: 88 MFVGVGAARVRDLFETAKRHAPCIVFIDE----IDAVGRKRGSGVGGGNDER--EQTLNQ 141 Query: 577 LLQVMD 582 LL MD Sbjct: 142 LLVEMD 147 >4YPL-A nrPDB Length = 555 Score = 86.0 bits (211), Expect = 6e-17, Method: Composition-based stats. Identities = 63/328 (19%), Positives = 121/328 (36%), Gaps = 57/328 (17%) Query: 414 VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLK--NLGDRLKMLVFGQDKAIEALT 471 + + ++ A + + E S++D + L + L +G E + Sbjct: 35 LERMQQGSPEATVARTYLDW--LTEVPWSKADPEVLDINHTRQVLDEDHYGLKDVKERIL 92 Query: 472 E--AIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHT 529 E A++ GL +K + GP GVGKT + +++++ + R + + Sbjct: 93 EYLAVRQLTQGLDVRNK-APILVLVGPPGVGKTSLGRSIARSMNRKFHRISLGGVRDEAE 151 Query: 530 V----SRLIGAPPGYV--GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDV----FNILLQ 579 + IGA PG + Q G++ + V+LLD+I+K D + +L+ Sbjct: 152 IRGHRRTYIGAMPGKLIHAMKQVGVI--------NPVILLDQIDKMSSDWRGDPASAMLE 203 Query: 580 VMD---NGTLTDNNGRK-ADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKI 635 V+D N T TD+ D V + T N Q ++ ++ I Sbjct: 204 VLDPEQNNTFTDHYLDVPYDLSKVFFITTAN-------------TLQTIPRPLLDRMEVI 250 Query: 636 FTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGY 695 P + N I +L + + ++ + +EV+ A + + Y Sbjct: 251 EIPGYTNMEKQAIARQYLWPKQVRE------SGMEGR-------IEVTDAAILRVISE-Y 296 Query: 696 DRAMGARPMARVIQDNLKKPLANELLFG 723 R G R + R + + + A L G Sbjct: 297 TREAGVRGLERELGK-IARKGAKFWLEG 323 Score = 44.4 bits (103), Expect = 2e-04, Method: Composition-based stats. Identities = 65/331 (19%), Positives = 123/331 (37%), Gaps = 45/331 (13%) Query: 195 LERAIQVLCRRRKNNPL-LVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSL 253 + + Q L R K L LVG GVGKT++ +A + + + + +G + Sbjct: 97 VRQLTQGLDVRNKAPILVLVGPPGVGKTSLGRSIARSM----------NRKFHRISLGGV 146 Query: 254 LAGTKYRGDFEKRF----KALLKQLEQDT--NSILFIDEIHTIIGAGAASGGQVDAANLI 307 + RG L+ ++Q N ++ +D+I + ++ A+ ++ Sbjct: 147 RDEAEIRGHRRTYIGAMPGKLIHAMKQVGVINPVILLDQIDKM----SSDWRGDPASAML 202 Query: 308 KPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEA 367 + L + + L++ F IT + +T I L + E Sbjct: 203 EVLDPE--------QNNTFTDHYLDVPYDLSKVF---FITTANTLQT--IPRPLLDRMEV 249 Query: 368 HHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIE 427 YT +A +A +Y+ + + + ++ E A L +S+ + V +E Sbjct: 250 IEIPGYTNMEKQA---IARQYLWPKQVRESGMEGRIEVTDAAILRVISEYTREAGVRGLE 306 Query: 428 SVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFG--QDKAIEALTEAIKMARAGLGHEH 485 + +IAR K + + L+ + G + + +A TE GL Sbjct: 307 RELGKIARKGAKFWLEGAWEGLRTIDASDIPTYLGIPRYRPDKAETEPQVGTAQGLA--W 364 Query: 486 KPVGSFLF----AGPTGVGKTEVTVQLSKAL 512 PVG L A G GK +T QL + + Sbjct: 365 TPVGGTLLTIEVAAVPGSGKLSLTGQLGEVM 395 >2R65-A nrPDB Length = 268 Score = 85.6 bits (210), Expect = 7e-17, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 74/194 (38%), Gaps = 31/194 (15%) Query: 202 LCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRG 261 L + LLVG G GKT +A+ +A + +G + G Sbjct: 39 LGAKIPKGVLLVGPPGTGKTLLAKAVAGE------------AHVPFFSMGGSSFIEMFVG 86 Query: 262 DFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG---GQVDAANLIKPLLS------ 312 R + L + ++ SI+FIDEI I + AA G G + + LL+ Sbjct: 87 LGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGVVSGNDEREQTLNQLLAEMDGFG 146 Query: 313 --SGKIRVIGSTTYQEFSNIFEKDRALAR--RF-QKIDITEPSIEETVQIINGLKPKYEA 367 + + V+ +T E D AL R RF +++ + +P V+I+ + Sbjct: 147 SENAPVIVLAATNRPEI-----LDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKL 201 Query: 368 HHDVRYTAKAVRAA 381 +DV A A Sbjct: 202 ANDVNLQEVAKLTA 215 Score = 39.4 bits (90), Expect = 0.006, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 21/117 (17%) Query: 458 MLVFGQDKAIEALTEAI-------KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSK 510 + G ++A E + E + + A G L GP G GKT + ++ Sbjct: 11 KDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPK----GVLLVGPPGTGKTLLAKAVAG 66 Query: 511 ALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIE 567 + S ++E +G +G + L + K +++ +DEI+ Sbjct: 67 EAHVPFFSMGGSSFIE-----MFVG-----LGASRVRDLFETAKKQAPSIIFIDEID 113 >2CE7-A nrPDB Length = 476 Score = 85.3 bits (209), Expect = 9e-17, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 91/278 (32%), Gaps = 49/278 (17%) Query: 181 RVGGIDPLIGREKELERAIQ------VLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 VGG + I KE+ ++ + R LLVG G GKT +A +A Sbjct: 17 DVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEANVP 76 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAG 294 +D + +G+ R + L Q + I+FIDEI + Sbjct: 77 FFHISGSDFVELFVGVGAA------------RVRDLFAQAKAHAPCIVFIDEIDAVGRHR 124 Query: 295 AAS-GGQVDAANL--------IKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR--RF-Q 342 A GG D + S I V+ +T + D AL R RF + Sbjct: 125 GAGLGGGHDEREQTLNQLLVEMDGFDSKEGIIVMAATNRPDI-----LDPALLRPGRFDK 179 Query: 343 KIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVI 402 KI + P + +I+ DV + I R D+ Sbjct: 180 KIVVDPPDMLGRKKILEIHTRNKPLAEDVNL-------------EIIAKRTPGFVGADLE 226 Query: 403 DEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKS 440 + A L R K + + D E + R+ P + Sbjct: 227 NLVNEAALLAAREGRDK-ITMKDFEEAIDRVIAGPARK 263 Score = 46.3 bits (108), Expect = 5e-05, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 18/104 (17%) Query: 464 DKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSE 523 + +E L + K R G L GP G GKT + ++ + S+ Sbjct: 29 KEVVEFLKDPSKFNRIGARMPK----GILLVGPPGTGKTLLARAVAGEANVPFFHISGSD 84 Query: 524 YME----------RHTVSRLIGAPPGYVGFDQGGLLTDAVIKHP 557 ++E R ++ P V D+ DAV +H Sbjct: 85 FVELFVGVGAARVRDLFAQAKAHAPCIVFIDE----IDAVGRHR 124 >5E7P-A nrPDB Length = 745 Score = 82.6 bits (202), Expect = 5e-16, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 59/164 (35%), Gaps = 27/164 (16%) Query: 206 RKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEK 265 LL G G GKT + LA +++++ L+ K+ G EK Sbjct: 518 PPRGVLLYGPPGCGKTFVVRALA----------SSGRLSVHAVKGSELM--DKWVGSSEK 565 Query: 266 RFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSS-------GKIRV 318 + L + S++F+DEI + + ++ LL+ + V Sbjct: 566 AVRELFARARDSAPSLVFLDEIDALAPRRGQNFDSGVTDKVVASLLTELDGIEPLRDVVV 625 Query: 319 IGSTTYQEFSNIFEKDRALAR--RFQK-IDITEPSIEETVQIIN 359 +G+T + D AL R R ++ + + P I+ Sbjct: 626 LGATNRPDL-----IDPALLRPGRLERLVFVEPPDAAARRDILR 664 Score = 68.7 bits (166), Expect = 9e-12, Method: Composition-based stats. Identities = 81/492 (16%), Positives = 149/492 (30%), Gaps = 64/492 (13%) Query: 110 VAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERM 169 V I E + + + +S GT E G S +++ Sbjct: 169 VGITWTSELLTVTAVDPPGTVSVQPNSVVSWGTGTPEDPAPPPTGRHTVSPQRSEQPVSF 228 Query: 170 ENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAW 229 ++ Q ++ L E EL + L L+ G +GVGK + + Sbjct: 229 DDVKVTHPQAVKLDEWLRLSLDEPELLKT---LGATPHLGVLVSGPAGVGKATMVRAVC- 284 Query: 230 RIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQ--LEQDTNSILFIDEI 287 A + LD + A ++R +++ ++ +LFI ++ Sbjct: 285 -----------ASRRVVELDGPEVGAL-----QVDERLRSVTSAVAAVTESGGVLFIADV 328 Query: 288 HTIIGAGAASGGQVDAANLIKPLL----SSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 ++ AG A LI L ++ + I ++ E + + + R + Sbjct: 329 DALLPAGNEMRPPEPVATLILAELRKAVATPGVAFIATSAVPENVDARLRAPEVCDR--E 386 Query: 344 IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRA---AVELAVKYINDRHLPDKAID 400 + ++ P ++ L + D+ A V + + L A Sbjct: 387 LGLSLPDATARRSLLEMLLRGVPSE-DLDLGDIADHTPGFVVADLAAVVREGALRAAARA 445 Query: 401 VIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLV 460 + R + + V S + + SV+ D + L V Sbjct: 446 SSSDDDPVLRHADLEG---ALTVIRPLS-RSASEEVSVGSVTLDDVGDMVETKRALTEAV 501 Query: 461 FGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKA--------L 512 + + + R G+ L GP G GKT V L+ + Sbjct: 502 LWPLQHPDTFS------RLGIDPPR----GVLLYGPPGCGKTFVVRALASSGRLSVHAVK 551 Query: 513 GIELLR--FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAH 570 G EL+ SE R +R + P V D+ DA+ +K Sbjct: 552 GSELMDKWVGSSEKAVRELFARARDSAPSLVFLDE----IDALAPRRGQNFDSGVTDK-- 605 Query: 571 PDVFNILLQVMD 582 V LL +D Sbjct: 606 --VVASLLTELD 615 >4YPN-A nrPDB Length = 293 Score = 82.2 bits (201), Expect = 7e-16, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 85/211 (40%), Gaps = 29/211 (13%) Query: 414 VSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLK--NLGDRLKMLVFGQDKAIEALT 471 + + ++ A + + E S++D + L + L +G E + Sbjct: 68 LERMQQGSPEATVARTYLDW--LTEVPWSKADPEVLDINHTRQVLDEDHYGLKDVKERIL 125 Query: 472 E--AIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHT 529 E A++ GL +K + GP GVGKT + +++++ + R + + Sbjct: 126 EYLAVRQLTQGLDVRNK-APILVLVGPPGVGKTSLGRSIARSMNRKFHRISLGGVRDEAE 184 Query: 530 V----SRLIGAPPGYV--GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDV----FNILLQ 579 + IGA PG + Q G++ + V+LLDEI+K D + +L+ Sbjct: 185 IRGHRRTYIGAMPGKLIHAMKQVGVI--------NPVILLDEIDKMSSDWRGDPASAMLE 236 Query: 580 VMD---NGTLTDNNGRK-ADFRNVVLVMTTN 606 V+D N T TD+ D V + T N Sbjct: 237 VLDPEQNNTFTDHYLDVPYDLSKVFFITTAN 267 Score = 37.5 bits (85), Expect = 0.022, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 17/103 (16%) Query: 195 LERAIQVLCRRRKNNPL-LVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSL 253 + + Q L R K L LVG GVGKT++ +A + + + + +G + Sbjct: 130 VRQLTQGLDVRNKAPILVLVGPPGVGKTSLGRSIARSM----------NRKFHRISLGGV 179 Query: 254 LAGTKYRGDFEKRF----KALLKQLEQDT--NSILFIDEIHTI 290 + RG L+ ++Q N ++ +DEI + Sbjct: 180 RDEAEIRGHRRTYIGAMPGKLIHAMKQVGVINPVILLDEIDKM 222 >6EF1-K nrPDB Length = 276 Score = 79.1 bits (193), Expect = 7e-15, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 82/206 (39%), Gaps = 43/206 (20%) Query: 170 ENFTTNLNQLARVGGIDPLIGREKELERAIQV----------LCRRRKNNPLLVGESGVG 219 EN ++ A VGG+D +++E+ A+++ + LL G G G Sbjct: 11 ENEKPDVT-YADVGGLD---MQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTG 66 Query: 220 KTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN 279 KT + + +A ++ + KY G+ + + + + ++ Sbjct: 67 KTMLVKAVANS----------TKAAFIRVNGSEFVH--KYLGEGPRMVRDVFRLARENAP 114 Query: 280 SILFIDEIHTIIGAG--AASGGQVDAANLIKPLLS-------SGKIRVIGSTTYQEFSNI 330 SI+FIDE+ +I A +G + ++ LL+ S ++VI +T + Sbjct: 115 SIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADT--- 171 Query: 331 FEKDRALAR--RFQKIDITEPSIEET 354 D AL R R + I PS+ + Sbjct: 172 --LDPALLRPGRLDR-KIEFPSLRDR 194 Score = 46.3 bits (108), Expect = 5e-05, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 25/130 (19%) Query: 487 PVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEY----------MERHTVSRLIGA 536 P L GP G GKT + ++ + +R + SE+ M R Sbjct: 53 PPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLAREN 112 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 P + D+ D++ D + +V IL++++ D + Sbjct: 113 APSIIFIDE----VDSIATKR-----FDAQTGSDREVQRILIELLTQ---MDGFDQST-- 158 Query: 597 RNVVLVMTTN 606 NV ++M TN Sbjct: 159 -NVKVIMATN 167 >5WVI-K nrPDB Length = 428 Score = 78.7 bits (192), Expect = 9e-15, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 82/206 (39%), Gaps = 43/206 (20%) Query: 170 ENFTTNLNQLARVGGIDPLIGREKELERAIQV----------LCRRRKNNPLLVGESGVG 219 EN ++ A VGG+D +++E+ A+++ + LL G G G Sbjct: 163 ENEKPDVT-YADVGGLD---MQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTG 218 Query: 220 KTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTN 279 KT + + +A ++ + KY G+ + + + + ++ Sbjct: 219 KTMLVKAVANS----------TKAAFIRVNGSEFVH--KYLGEGPRMVRDVFRLARENAP 266 Query: 280 SILFIDEIHTIIGAG--AASGGQVDAANLIKPLLS-------SGKIRVIGSTTYQEFSNI 330 SI+FIDE+ +I A +G + ++ LL+ S ++VI +T + Sbjct: 267 SIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADT--- 323 Query: 331 FEKDRALAR--RFQKIDITEPSIEET 354 D AL R R + I PS+ + Sbjct: 324 --LDPALLRPGRLDR-KIEFPSLRDR 346 Score = 46.0 bits (107), Expect = 6e-05, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 25/130 (19%) Query: 487 PVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEY----------MERHTVSRLIGA 536 P L GP G GKT + ++ + +R + SE+ M R Sbjct: 205 PPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLAREN 264 Query: 537 PPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF 596 P + D+ D++ D + +V IL++++ D + Sbjct: 265 APSIIFIDE----VDSIATKR-----FDAQTGSDREVQRILIELLTQ---MDGFDQST-- 310 Query: 597 RNVVLVMTTN 606 NV ++M TN Sbjct: 311 -NVKVIMATN 319 >2QZ4-A nrPDB Length = 262 Score = 72.9 bits (177), Expect = 5e-13, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 63/170 (37%), Gaps = 30/170 (17%) Query: 202 LCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRG 261 L + LL+G G GKT +A+ +A + MA + G A Sbjct: 34 LGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFL--AMAGAEFVEVIGGLGAA------ 85 Query: 262 DFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAA-------SGGQVDAANLIKPLLSSG 314 R ++L K+ I++IDEI + + + + L+ + G Sbjct: 86 ----RVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMG 141 Query: 315 ---KIRVIGSTTYQEFSNIFEKDRALAR--RFQK-IDITEPSIEETVQII 358 + V+ ST + D AL R R + + I P+++E +I Sbjct: 142 TTDHVIVLASTNRADI-----LDGALMRPGRLDRHVFIDLPTLQERREIF 186 Score = 45.2 bits (105), Expect = 9e-05, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 48/153 (31%), Gaps = 30/153 (19%) Query: 465 KAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLS--------KALGIEL 516 + ++ L + + G L GP G GKT + ++ G E Sbjct: 20 EFVDYLKSPERFLQLGAKVPK----GALLLGPPGCGKTLLAKAVATEAQVPFLAMAGAEF 75 Query: 517 LRF--DMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLL-LDEIEKAHPDV 573 + + R P V D+ DAV K + E+ Sbjct: 76 VEVIGGLGAARVRSLFKEARARAPCIVYIDE----IDAVGKKRSTTMSGFSNTEE--EQT 129 Query: 574 FNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN 606 N LL MD TD+ V+++ +TN Sbjct: 130 LNQLLVEMDGMGTTDH---------VIVLASTN 153 >4I5O-A nrPDB Length = 363 Score = 69.1 bits (167), Expect = 7e-12, Method: Composition-based stats. Identities = 78/373 (20%), Positives = 132/373 (35%), Gaps = 85/373 (22%) Query: 451 NLGDRLKMLVFGQDKAIEALTEAI----KMARAGLGHEHKPVG--SFLFAGPTGVGKTEV 504 + + L V GQ++A + L A+ K R G +G + L GPTG GKT + Sbjct: 8 EIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLL 67 Query: 505 TVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAV---- 560 L++ L + D + E GYVG D ++ + K + V Sbjct: 68 AETLARLLDVPFTMADATTLTE-----------AGYVGEDVENIIQKLLQKCDYDVQKAQ 116 Query: 561 ---LLLDEIEKAHPD--------------VFNILLQVMDN--GTLTDNNGRK-------- 593 + +DEI+K V LL++++ + GRK Sbjct: 117 RGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQ 176 Query: 594 ADFRNVVLV-----------------------MTTNAGVRETERKSIGLIHQDNSTDAME 630 D ++ + + + L+ Q D Sbjct: 177 VDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAKSDKASEGELLAQVEPEDL-- 234 Query: 631 EIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ----LDQKGVSLEVSQEA 686 IK PEF RL + + LS + + Q++ + L Q + +GV LE EA Sbjct: 235 -IKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEA 293 Query: 687 RNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNE----L 742 + +A+K R GAR + +++ L + + S+ D +V + + L Sbjct: 294 LDAIAKKAMARKTGARGLRSIVEAALLDTMYDL---PSMEDVEKVVIDESVIDGQSEPLL 350 Query: 743 TYGFQSAQKHKAE 755 YG AQ+ E Sbjct: 351 IYGKPEAQQASGE 363 Score = 65.2 bits (157), Expect = 1e-10, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 16/89 (17%) Query: 207 KNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGD-FEK 265 K+N LL+G +G GKT +AE LA + DVP MAD T L Y G+ E Sbjct: 51 KSNILLIGPTGSGKTLLAETLARLL---DVPFTMADATT--------LTEAGYVGEDVEN 99 Query: 266 RFKALLKQLEQDTN----SILFIDEIHTI 290 + LL++ + D I++IDEI I Sbjct: 100 IIQKLLQKCDYDVQKAQRGIVYIDEIDKI 128 >4XGU-A nrPDB Length = 424 Score = 61.0 bits (146), Expect = 2e-09, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 66/167 (39%), Gaps = 24/167 (14%) Query: 210 PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKA 269 LL G G GKT++ +GLA + + L+I S +K+ + K + Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLS---IRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQK 231 Query: 270 LLKQLEQDTN---SILF--IDEIHTIIGA---GAASGGQVDAANLIKPLLS-------SG 314 + Q+++ ++F IDE+ ++ ++ DA + LL+ Sbjct: 232 MFDQIDELAEDEKCMVFVLIDEVESLGMCRESSSSRSEPSDAIRAVNALLTQIDRIRRRD 291 Query: 315 KIRVIGSTTYQEFSNIFEKDRALARRFQKI-DITEPSIEETVQIING 360 + ++ ++ + D+AL R + ++ +PS ++ Sbjct: 292 NVLILCTSNLEST-----LDKALVDRADIVKNVGQPSDFARYSMLKS 333 Score = 39.4 bits (90), Expect = 0.007, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 47/138 (34%), Gaps = 32/138 (23%) Query: 491 FLFAGPTGVGKTEVTVQLSKALGIEL----LRFDMSEYMERHTVSRLIGAPPGYVG--FD 544 L GP G GKT + L++ L I + + M E S+ V FD Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQKMFD 234 Query: 545 QGGLLTDAVIKHPHAVLLLDEIEKA---------------HPDVFNILLQVMDNGTLTDN 589 Q L + + +L+DE+E N LL +D D Sbjct: 235 QIDELAED--EKCMVFVLIDEVESLGMCRESSSSRSEPSDAIRAVNALLTQIDRIRRRD- 291 Query: 590 NGRKADFRNVVLVMTTNA 607 NV+++ T+N Sbjct: 292 --------NVLILCTSNL 301 >5VQ9-D nrPDB Length = 432 Score = 60.6 bits (145), Expect = 3e-09, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 69/164 (42%), Gaps = 15/164 (9%) Query: 206 RKNNP-LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFE 264 N LL G G GKT++ + LA ++ + ++I S +K+ + Sbjct: 170 TWNRVVLLHGPPGTGKTSLCKALAQKLT---IRLSSRYRYGQLIEINSHSLFSKWFSESG 226 Query: 265 KRFKALLKQLE---QDTNSILF--IDEIHTIIGAG---AASGGQVDAANLIKPLLSS-GK 315 K + ++++ D ++++F ID++ ++ A A DA ++ +L+ + Sbjct: 227 KLVTKMFQKIQDLIDDKDALVFVLIDQVESLTAARNACRAGTEPSDAIRVVNAVLTQIDQ 286 Query: 316 IRVIGSTTYQEFSNIFEK-DRALARRFQ-KIDITEPSIEETVQI 357 I+ + SNI EK D A R K I PS +I Sbjct: 287 IKRHSNVVILTTSNITEKIDVAFVDRADIKQYIGPPSAAAIFKI 330 Score = 35.6 bits (80), Expect = 0.079, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 51/142 (35%), Gaps = 40/142 (28%) Query: 491 FLFAGPTGVGKTEVTVQLSKALGIEL-LRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLL 549 L GP G GKT + L++ L I L R+ + +E ++ S F + G L Sbjct: 175 VLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSK------WFSESGKL 228 Query: 550 TDAVIKHPHAVL---------LLDEIEKAHP---------------DVFNILLQVMDNGT 585 + + ++ L+D++E V N +L +D Sbjct: 229 VTKMFQKIQDLIDDKDALVFVLIDQVESLTAARNACRAGTEPSDAIRVVNAVLTQID--- 285 Query: 586 LTDNNGRKADFRNVVLVMTTNA 607 + NVV++ T+N Sbjct: 286 ------QIKRHSNVVILTTSNI 301 >1OFI-A nrPDB Length = 310 Score = 57.5 bits (137), Expect = 2e-08, Method: Composition-based stats. Identities = 61/305 (20%), Positives = 123/305 (40%), Gaps = 55/305 (18%) Query: 455 RLKMLVFGQDKAIEALTEAIKMA--RAGLGHEHK---PVGSFLFAGPTGVGKTEVTVQLS 509 L + GQ A A+ A++ R L + + L GPTGVGKTE+ +L+ Sbjct: 12 ELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLA 71 Query: 510 KALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEK- 568 K ++ + +++ E V + + + + GG + DAV + + ++ +DEI+K Sbjct: 72 KLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDSAGGAI-DAVEQ--NGIVFIDEIDKI 128 Query: 569 ------AHPDVFNI-----LLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSI 617 + DV LL +++ T++ +G +++ + + G + R S Sbjct: 129 CKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHG-MVKTDHILFIAS---GAFQVARPSD 184 Query: 618 GLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQ----L 673 PE + RL + LS +++ + L Q + Sbjct: 185 ------------------LIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALM 226 Query: 674 DQKGVSLEVSQEARNWLAEKGY-----DRAMGARPMARVIQDNLKKPLANELLFGSLVDG 728 +GV++ + +A +AE + +GAR + V++ L ++ S ++G Sbjct: 227 ATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMER-LMDKIS---FSASDMNG 282 Query: 729 GQVTV 733 V + Sbjct: 283 QTVNI 287 Score = 51.0 bits (120), Expect = 2e-06, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 17/104 (16%) Query: 204 RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRG-D 262 N L++G +GVGKT IA LA +A+ ++ Y G + Sbjct: 47 EVTPKNILMIGPTGVGKTEIARRLAK----------LANAPFIKVEATKFT-EVGYVGKE 95 Query: 263 FEKRFKALLKQL-----EQDTNSILFIDEIHTIIGAGAASGGQV 301 + + L + N I+FIDEI I G SG V Sbjct: 96 VDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADV 139 >1UM8-A nrPDB Length = 376 Score = 57.1 bits (136), Expect = 3e-08, Method: Composition-based stats. Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 16/89 (17%) Query: 207 KNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGD-FEK 265 K+N LL+G +G GKT +A+ LA + D+P ++D T L Y G+ E Sbjct: 72 KSNILLIGPTGSGKTLMAQTLAKHL---DIPIAISDAT--------SLTEAGYVGEDVEN 120 Query: 266 RFKALLK----QLEQDTNSILFIDEIHTI 290 LL+ +++ I+FIDEI I Sbjct: 121 ILTRLLQASDWNVQKAQKGIVFIDEIDKI 149 Score = 55.6 bits (132), Expect = 9e-08, Method: Composition-based stats. Identities = 72/337 (21%), Positives = 115/337 (34%), Gaps = 83/337 (24%) Query: 450 KNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHK---------------------PV 488 K L L V GQ++A + + A+ L + K Sbjct: 13 KELKAVLDNYVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSK 72 Query: 489 GSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGL 548 + L GPTG GKT + L+K L I + D + E GYVG D + Sbjct: 73 SNILLIGPTGSGKTLMAQTLAKHLDIPIAISDATSLTE-----------AGYVGEDVENI 121 Query: 549 LTD-------AVIKHPHAVLLLDEIEKAH--------------PDVFNILLQVMDNG--T 585 LT V K ++ +DEI+K V LL++++ Sbjct: 122 LTRLLQASDWNVQKAQKGIVFIDEIDKISRLSENRSITRDVSGEGVQQALLKIVEGSLVN 181 Query: 586 LTDNNGRKADFRNVVLVMTTNA---------GVRETERKSI-----GLIHQDNSTDAMEE 631 + GRK N + + T++ G+ E +K G + S E Sbjct: 182 IPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEA 241 Query: 632 IKKIFT----------PEFRNRLDNIIWFDHLSTDVIHQVVDK----FIVELQVQLDQKG 677 I + PE RL + D +S + + ++ K I + Q Sbjct: 242 ILHLVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDE 301 Query: 678 VSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKK 714 V L +EA +A+ +R GAR + +I+D Sbjct: 302 VDLIFEEEAIKEIAQLALERKTGARGLRAIIEDFCLD 338 >3PVS-A nrPDB Length = 447 Score = 55.6 bits (132), Expect = 8e-08, Method: Composition-based stats. Identities = 56/226 (24%), Positives = 89/226 (39%), Gaps = 43/226 (19%) Query: 170 ENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNN----PLLVGESGVGKTAIAE 225 +N L R + IG++ L A + L R + +L G G GKT +AE Sbjct: 10 DNTFQPLAARMRPENLAQYIGQQH-LLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAE 68 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS----I 281 +A R DV I ++ +G K + +++ Q+ N+ I Sbjct: 69 VIA-RYANADVE-----------RISAVTSGVK-------EIREAIERARQNRNAGRRTI 109 Query: 282 LFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRF 341 LF+DE+H + Q DA P + G I IG+TT FE + AL R Sbjct: 110 LFVDEVHRF------NKSQQDA---FLPHIEDGTITFIGATTENPS---FELNSALLSRA 157 Query: 342 QKIDITEPSIEETVQII-NGLKPKYE--AHHDVRYTAKAVRAAVEL 384 + + S E+ Q++ ++ K D+ + RA EL Sbjct: 158 RVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAEL 203 Score = 40.6 bits (93), Expect = 0.002, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 71/220 (32%), Gaps = 28/220 (12%) Query: 490 SFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLL 549 S + GP G GKT + +++ ++ R + + I ++ Sbjct: 52 SMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVK-EIREAI---------ERARQN 101 Query: 550 TDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN--- 606 +A + +L +DE+ + + + L +++GT+T + T N Sbjct: 102 RNAGRR---TILFVDEVHRFNKSQQDAFLPHIEDGTIT-----------FIGATTENPSF 147 Query: 607 -AGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKF 665 R + L+ ++ D + + + + R I + I ++V+ Sbjct: 148 ELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGD 207 Query: 666 IVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMA 705 L+ EV + L + G R Sbjct: 208 ARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSAR 247 >5J1S-A nrPDB Length = 284 Score = 52.9 bits (125), Expect = 5e-07, Method: Composition-based stats. Identities = 39/255 (15%), Positives = 83/255 (32%), Gaps = 29/255 (11%) Query: 450 KNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLS 509 + L L +FGQ A + + A+ KP+ + G TG GK V+ ++ Sbjct: 11 EALQKDLDDNLFGQHLAKKIILNAV-FGFINNPKPKKPL-TLSLHGWTGTGKNFVSKIIA 68 Query: 510 KALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLL--TDAVIKHPHAVLLLDEIE 567 + + L S+Y+ + + L V ++ + D+++ Sbjct: 69 ENIYEGGLN---SDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDQMD 125 Query: 568 KAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGL-------- 619 K H + + + +D L D ++ + + +NAG ++ Sbjct: 126 KMHAGLIDAIKPFLDYYDLVDG----VSYQKAMFIFLSNAGAERITDVALDFWRSGKQRE 181 Query: 620 ------IHQDNSTDAMEEIKKIFTPEFR---NRLDNIIWFDHLSTDVIHQVVDKFIVELQ 670 I S F N +D + F L + + + Sbjct: 182 DIKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRVEMQSRG 241 Query: 671 VQLDQKGVSLEVSQE 685 ++D+ + V++E Sbjct: 242 YEIDE-DIVSRVAEE 255 >2CHV-A nrPDB Length = 319 Score = 47.9 bits (112), Expect = 2e-05, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 98/306 (32%), Gaps = 44/306 (14%) Query: 177 NQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDV 236 + R +D ++G+++ ++R + R+ + L G G GKTA A LA + + Sbjct: 8 VEKYRPRTLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFGENW 67 Query: 237 PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS------ILFIDEIHTI 290 + ++ + +K+ + I+F+DE + Sbjct: 68 RD-----NFIEMNASDERGI--------DVVRHKIKEFARTAPIGGAPFKIIFLDEADAL 114 Query: 291 IGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 350 A A + S ++ + A+ R P Sbjct: 115 TADAQA------ALRRTMEMYSKSCRFILSCNYVSRIIEPIQSRCAVFR-----FKPVPK 163 Query: 351 IEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR 410 +++ + + V+ T + A + ++ KAI+ + A A Sbjct: 164 EAMKKRLLEICEKE-----GVKITEDGLEALIYISGGDFR------KAINALQGAAAIGE 212 Query: 411 LMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEAL 470 ++ + A E + I + + ++ R+ L L M G+D + Sbjct: 213 VVDADTIYQITATARPEEMTELIQTALKGNFMEA-RELLDRLMVEYGMS--GEDIVAQLF 269 Query: 471 TEAIKM 476 E I M Sbjct: 270 REIISM 275 Score = 43.6 bits (101), Expect = 3e-04, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 48/133 (36%), Gaps = 32/133 (24%) Query: 459 LVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE--- 515 V GQD+ I+ L ++ K + LF+GP G GKT + L++ L E Sbjct: 18 EVVGQDEVIQRLKGYVER---------KNIPHLLFSGPPGTGKTATAIALARDLFGENWR 68 Query: 516 --LLRFDMSEYM----ERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKA 569 + + S+ RH + P + P ++ LDE + Sbjct: 69 DNFIEMNASDERGIDVVRHKIKEFARTAP--------------IGGAPFKIIFLDEADAL 114 Query: 570 HPDVFNILLQVMD 582 D L + M+ Sbjct: 115 TADAQAALRRTME 127 >1IM2-A nrPDB Length = 444 Score = 47.9 bits (112), Expect = 2e-05, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 5/87 (5%) Query: 455 RLKMLVFGQDKAIEALTEAIKMA--RAGLGHEHK---PVGSFLFAGPTGVGKTEVTVQLS 509 L + GQ A A+ A++ R L + + L GPTGVGKTE+ +L+ Sbjct: 12 ELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLA 71 Query: 510 KALGIELLRFDMSEYMERHTVSRLIGA 536 K ++ + +++ E V + + + Sbjct: 72 KLANAPFIKVEATKFTEVGYVGKEVDS 98 Score = 33.6 bits (75), Expect = 0.33, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 17/41 (41%) Query: 204 RRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCT 244 N L++G +GVGKT IA LA + T Sbjct: 47 EVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFT 87 Score = 29.8 bits (65), Expect = 4.6, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Query: 264 EKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQV 301 E+ + + +EQ+ I+FIDEI I G SG V Sbjct: 238 EELKQKAIDAVEQNG--IVFIDEIDKICKKGEYSGADV 273 >2CHG-A nrPDB Length = 226 Score = 47.1 bits (110), Expect = 2e-05, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 35/215 (16%) Query: 177 NQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDV 236 + R +D ++G+++ ++R + R+ + L G G GKTA A LA + + Sbjct: 8 VEKYRPRTLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFGENW 67 Query: 237 PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS------ILFIDEIHTI 290 + ++ + +K+ + I+F+DE + Sbjct: 68 RD-----NFIEMNASDERGI--------DVVRHKIKEFARTAPIGGAPFKIIFLDEADAL 114 Query: 291 IGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPS 350 A A + S ++ + A+ R P Sbjct: 115 TADAQA------ALRRTMEMYSKSCRFILSCNYVSRIIEPIQSRCAVFR-----FKPVPK 163 Query: 351 IEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELA 385 +++ + + V+ T + A + ++ Sbjct: 164 EAMKKRLLEICEKE-----GVKITEDGLEALIYIS 193 Score = 45.2 bits (105), Expect = 1e-04, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 48/133 (36%), Gaps = 32/133 (24%) Query: 459 LVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE--- 515 V GQD+ I+ L ++ K + LF+GP G GKT + L++ L E Sbjct: 18 EVVGQDEVIQRLKGYVER---------KNIPHLLFSGPPGTGKTATAIALARDLFGENWR 68 Query: 516 --LLRFDMSEYM----ERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKA 569 + + S+ RH + P + P ++ LDE + Sbjct: 69 DNFIEMNASDERGIDVVRHKIKEFARTAP--------------IGGAPFKIIFLDEADAL 114 Query: 570 HPDVFNILLQVMD 582 D L + M+ Sbjct: 115 TADAQAALRRTME 127 >1HQC-A nrPDB Length = 324 Score = 46.7 bits (109), Expect = 4e-05, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 60/164 (36%), Gaps = 39/164 (23%) Query: 180 ARVGGIDPLIGRE---KELERAIQVLCRR--RKNNPLLVGESGVGKTAIAEGLAWRIVQG 234 R +D IG+E ++L ++ R + LL G G+GKT +A +A + Sbjct: 6 LRPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHELGVN 65 Query: 235 DVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAG 294 L + S A K GD L++ + ILFIDEIH + Sbjct: 66 -------------LRVTSGPAIEK-PGDLAAILANSLEEGD-----ILFIDEIHRLSRQA 106 Query: 295 AASG-------------GQVDAANLIKPLLSSGKIRVIGSTTYQ 325 GQ AA I+ L + IG+TT Sbjct: 107 EEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTL--IGATTRP 148 Score = 35.2 bits (79), Expect = 0.12, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 5/67 (7%) Query: 461 FGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFD 520 GQ++ + L ++ A+A +P+ L GP G+GKT + ++ LG+ L R Sbjct: 15 IGQERLKQKLRVYLEAAKA----RKEPLEHLLLFGPPGLGKTTLAHVIAHELGVNL-RVT 69 Query: 521 MSEYMER 527 +E+ Sbjct: 70 SGPAIEK 76 >2QBY-A nrPDB Length = 386 Score = 46.3 bits (108), Expect = 4e-05, Method: Composition-based stats. Identities = 44/265 (16%), Positives = 97/265 (36%), Gaps = 24/265 (9%) Query: 186 DPLIGREKELERAIQVLCRRRK----NNPLLVGESGVGKTAIAEGLAWRIVQGDVPE--- 238 D L RE ++ + +L + NN + G +G GKTA+ + + ++ + + + Sbjct: 20 DELPHREDQIRKIASILAPLYREEKPNNIFIYGLTGTGKTAVVKFVLSKLHKKFLGKFKH 79 Query: 239 -------VMADCTIYSLDIGSLLAGTKYRGDF-EKRFKALLKQLEQDT-NSILFIDEIHT 289 + + + + SL + G + ++ L+K + ++ +DEI Sbjct: 80 VYINTRQIDTPYRVLADLLESLDVKVPFTGLSIAELYRRLVKAVRDYGSQVVIVLDEIDA 139 Query: 290 IIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEP 349 + + + + I ++ KI IG T +F ++ D + + +I P Sbjct: 140 FV--KKYNDDILYKLSRINSEVNKSKISFIGITNDVKFVDL--LDPRVKSSLSEEEIIFP 195 Query: 350 SIEETVQIINGLKPKYEAHHDVRYTAKAVRA--AVELAVKYINDRHLPDKAIDVIDEAGA 407 ++ + L + + V A A ++ + R D + V E Sbjct: 196 PYNA-EELEDILTKRAQMAFKPGVLPDNVIKLCAALAAREHGDARRALD-LLRVSGEIAE 253 Query: 408 RARLMPVSKRKKTVNVADIESVVAR 432 R + V + + +IE R Sbjct: 254 RMKDTKVKEEYVYMAKEEIERDRVR 278 >1E94-E nrPDB Length = 449 Score = 46.0 bits (107), Expect = 7e-05, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 5/87 (5%) Query: 455 RLKMLVFGQDKAIEALTEAIKMA--RAGLGHEHK---PVGSFLFAGPTGVGKTEVTVQLS 509 L + GQD A ++ A++ R L E + + L GPTGVGKTE+ +L+ Sbjct: 18 ELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLA 77 Query: 510 KALGIELLRFDMSEYMERHTVSRLIGA 536 K ++ + +++ E V + + + Sbjct: 78 KLANAPFIKVEATKFTEVGYVGKEVDS 104 Score = 34.0 bits (76), Expect = 0.25, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 24/57 (42%) Query: 188 LIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCT 244 L R + ++ ++ N L++G +GVGKT IA LA + T Sbjct: 37 LRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFT 93 Score = 29.4 bits (64), Expect = 6.3, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%) Query: 264 EKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASG 298 E+ + + +EQ I+FIDEI I G +SG Sbjct: 243 EELKQDAIDAVEQHG--IVFIDEIDKICKRGESSG 275 >1D2N-A nrPDB Length = 272 Score = 45.6 bits (106), Expect = 8e-05, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 60/173 (34%), Gaps = 26/173 (15%) Query: 171 NFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWR 230 + + ++ G + L+ + K +R V + LL G GKTA+A +A Sbjct: 37 KWGDPVTRVLDDGEL--LVQQTKNSDRTPLV-------SVLLEGPPHSGKTALAAKIAEE 87 Query: 231 IVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTI 290 + D I + A K + + S + +D+I + Sbjct: 88 SNFPFIKICSPDKMIGFSETAKCQA-----------MKKIFDDAYKSQLSCVVVDDIERL 136 Query: 291 I-----GAGAASGGQVDAANLIKPLLSSGK-IRVIGSTTYQEFSNIFEKDRAL 337 + G ++ L+K G+ + +IG+T+ ++ E A Sbjct: 137 LDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAF 189 Score = 30.9 bits (68), Expect = 2.0, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 16/35 (45%) Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRF 519 P+ S L GP GKT + ++++ ++ Sbjct: 61 RTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKI 95 >1IQP-A nrPDB Length = 327 Score = 45.6 bits (106), Expect = 9e-05, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 87/255 (34%), Gaps = 29/255 (11%) Query: 177 NQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDV 236 + R +D ++G+E ++R + + L G GVGKT A LA + + Sbjct: 16 VEKYRPQRLDDIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGVGKTTAALALARELFGENW 75 Query: 237 PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAA 296 L+ R ++ + K + + I+F+DE + Sbjct: 76 RH-----NFLELNASDERGINVIREKVKEFART--KPIGGASFKIIFLDEADAL------ 122 Query: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 + A + SS ++ + + A+ RF+ + E+ + Sbjct: 123 TQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIF-RFRPL-----RDEDIAK 176 Query: 357 IINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSK 416 + + + + T + ++A + +A + +AI+++ A A + + Sbjct: 177 RLRYIAE----NEGLELTEEGLQAILYIAEGDMR------RAINILQAAAALDKKITDEN 226 Query: 417 RKKTVNVADIESVVA 431 + A E + Sbjct: 227 VFMVASRARPEDIRE 241 Score = 35.9 bits (81), Expect = 0.065, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 9/65 (13%) Query: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRF 519 + GQ+ ++ L +K + LFAGP GVGKT + L++ L E R Sbjct: 27 IVGQEHIVKRLKHYVKTGS---------MPHLLFAGPPGVGKTTAALALARELFGENWRH 77 Query: 520 DMSEY 524 + E Sbjct: 78 NFLEL 82 >3SYK-A nrPDB Length = 309 Score = 44.4 bits (103), Expect = 2e-04, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 78/209 (37%), Gaps = 26/209 (12%) Query: 161 EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNN-----PLLV-- 213 E +G +E +E L G+ P+ R +E + V R+K P L Sbjct: 18 EGSGAKEVLEELDRELI------GLKPVKDRIRETAALLLVERARQKLGLAHETPTLHMS 71 Query: 214 --GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALL 271 G G GKT +A +A + + + + S+ L+ +Y G + K +L Sbjct: 72 FTGNPGTGKTTVALKMAGLLHRLGY---VRKGHLVSVTRDDLVG--QYIGHTAPKTKEVL 126 Query: 272 KQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKP--LLSSGKIRVIGSTTYQEFSN 329 K+ +LFIDE + + +A ++ + + VI + N Sbjct: 127 KRAM---GGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNRDDLVVILAGYADRMEN 183 Query: 330 IFEKDRALARRF-QKIDITEPSIEETVQI 357 F+ + R I+ + S EE +I Sbjct: 184 FFQSNPGFRSRIAHHIEFPDYSDEELFEI 212 Score = 34.8 bits (78), Expect = 0.13, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 59/160 (36%), Gaps = 23/160 (14%) Query: 442 SQSDRDTLKNLGDRLKMLVFGQDKAIEALTEA-----IKMARAGLGHEHK-PVGSFLFAG 495 ++ + K + + L + G + + E ++ AR LG H+ P F G Sbjct: 15 AEYEGSGAKEVLEELDRELIGLKPVKDRIRETAALLLVERARQKLGLAHETPTLHMSFTG 74 Query: 496 PTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPG-YVGFDQGGLLTDAVI 554 G GKT V ++++ L + + H VS G Y+G + + Sbjct: 75 NPGTGKTTVALKMAGLLHR------LGYVRKGHLVSVTRDDLVGQYIGH-TAPKTKEVLK 127 Query: 555 KHPHAVLLLDEI---------EKAHPDVFNILLQVMDNGT 585 + VL +DE + ILLQVM+N Sbjct: 128 RAMGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNR 167 >4WW4-B nrPDB Length = 513 Score = 44.0 bits (102), Expect = 2e-04, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 59/164 (35%), Gaps = 8/164 (4%) Query: 164 GGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVL-----CRRRKNNPLLVGESGV 218 + + + L L+G+EK + A VL + L+ G Sbjct: 47 AAHSHIRGLGVDADTLEPRPSSQGLVGQEKARKAAAVVLEMIKQGKIAGRAVLIAGPPST 106 Query: 219 GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDT 278 GKTAIA G+A + Q +A I+SL++ A T+ F K +K+ + Sbjct: 107 GKTAIAMGMAQSLGQDVPFTTLAASEIFSLEMSKTEALTQ---AFRKSIGVRIKEESEIM 163 Query: 279 NSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGST 322 + +I + GA G ++ + G + T Sbjct: 164 EGEVVEIQIDRSVTGGAKQGKLTIKTTDMEAIYDMGSKMIDAMT 207 Score = 33.2 bits (74), Expect = 0.37, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 4/60 (6%) Query: 457 KMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIEL 516 + GQ+KA +A ++M + G + L AGP GKT + + ++++LG ++ Sbjct: 68 SQGLVGQEKARKAAAVVLEMIKQGKIAGR----AVLIAGPPSTGKTAIAMGMAQSLGQDV 123 >1NJG-A nrPDB Length = 250 Score = 44.0 bits (102), Expect = 3e-04, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 20/146 (13%) Query: 450 KNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLS 509 + + V GQ+ + AL + + R ++LF+G GVGKT + L+ Sbjct: 15 RKWRPQTFADVVGQEHVLTALANGLSLGRI--------HHAYLFSGTRGVGKTSIARLLA 66 Query: 510 KALGIEL--------LRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHP---- 557 K L E + + E + V + + L D V P Sbjct: 67 KGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 126 Query: 558 HAVLLLDEIEKAHPDVFNILLQVMDN 583 V L+DE+ FN LL+ ++ Sbjct: 127 FKVYLIDEVHMLSRHSFNALLKTLEE 152 >2XSZ-D nrPDB Length = 378 Score = 43.3 bits (100), Expect = 4e-04, Method: Composition-based stats. Identities = 49/274 (17%), Positives = 92/274 (33%), Gaps = 71/274 (25%) Query: 210 PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTK----------- 258 L+ G+ G GKTAIA G+A + +A I+SL++ A T+ Sbjct: 88 VLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIK 147 Query: 259 -----------------------------------YRGDFEKRFKALLKQLEQDT----- 278 + + ++ A + + ++ Sbjct: 148 EGPPGVVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEII 207 Query: 279 NSILFIDEIHTIIGAGAASGG---QVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDR 335 +LFIDE+H + + + D A ++ + G R+ G++ + Sbjct: 208 PGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPID--- 264 Query: 336 ALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLP 395 L R + T S ++T QI+ + + R +E +++Y Sbjct: 265 -LLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRY------- 316 Query: 396 DKAIDVIDEAGARARLMPVSKRKKTVNVADIESV 429 AI +I A R ++ V V DI+ V Sbjct: 317 --AIQLITAASLVCRK----RKGTEVQVDDIKRV 344 Score = 31.7 bits (70), Expect = 1.1, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 20/104 (19%) Query: 454 DRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG 513 + + GQ A A ++M R G + L AG G GKT + + +++ALG Sbjct: 55 RQASQGMVGQLAARRAAGVVLEMIREGKIAGR----AVLIAGQPGTGKTAIAMGMAQALG 110 Query: 514 I----------ELLRFDMSEY-MERHTVSRLIG-----APPGYV 541 E+ +MS+ R IG PPG V Sbjct: 111 PDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEGPPGVV 154 >2XSZ-A nrPDB Length = 367 Score = 43.3 bits (100), Expect = 4e-04, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 65/199 (32%), Gaps = 66/199 (33%) Query: 156 QPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKN------N 209 ++ ++ + + LA+ L+G+E A V+ K+ Sbjct: 22 STTKTQRIASHSHVKGLGLDESGLAKQAA-SGLVGQEN-AREACGVIVELIKSKKMAGRA 79 Query: 210 PLLVGESGVGKTAIAEGLAWRI------------------------------------VQ 233 LL G G GKTA+A +A + ++ Sbjct: 80 VLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIK 139 Query: 234 GDVPEVMADCTIYSLD---------------IGSLLA------GTKYRGDFEKRFKALLK 272 P ++ D T++ LD +G L+ K RG+ K + Sbjct: 140 EGPPGIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYID 199 Query: 273 Q-LEQDTNSILFIDEIHTI 290 Q + + +LF+DE+H + Sbjct: 200 QGIAELVPGVLFVDEVHML 218 Score = 36.7 bits (83), Expect = 0.036, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 425 DIESVVARIARIPEKSVSQSDRDTLKN--LGDRLKMLVFGQDKAIEALTEAIKMARAGLG 482 IE V + S S L L + + GQ+ A EA +++ + Sbjct: 16 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVEL----IK 71 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIEL 516 + + L AGP G GKT + + +++ LG ++ Sbjct: 72 SKKMAGRAVLLAGPPGTGKTALALAIAQELGSKV 105 >3GLF-B nrPDB Length = 395 Score = 42.9 bits (99), Expect = 5e-04, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 20/146 (13%) Query: 450 KNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLS 509 + + V GQ+ + AL + + R ++LF+G GVGKT + L+ Sbjct: 30 RKWRPQTFADVVGQEHVLTALANGLSLGRI--------HHAYLFSGTRGVGKTSIARLLA 81 Query: 510 KALGIEL--------LRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHP---- 557 K L E + + E + V + + L D V P Sbjct: 82 KGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGR 141 Query: 558 HAVLLLDEIEKAHPDVFNILLQVMDN 583 V L+DE+ FN LL+ ++ Sbjct: 142 FKVYLIDEVHMLSRHSFNALLKTLEE 167 >2Z4R-A nrPDB Length = 440 Score = 42.9 bits (99), Expect = 6e-04, Method: Composition-based stats. Identities = 52/270 (19%), Positives = 100/270 (37%), Gaps = 37/270 (13%) Query: 209 NPLLV-GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRF 267 NPL + G G+GKT + + + +VQ + D + + K+ D Sbjct: 131 NPLFIYGGVGLGKTHLLQSIGNYVVQNE-----PDLRVM------YITSEKFLNDLVDSM 179 Query: 268 K----ALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTT 323 K ++ + IL ID++ +IG +G Q + + L SGK VI S Sbjct: 180 KEGKLNEFREKYRKKVDILLIDDVQFLIGK---TGVQTELFHTFNELHDSGKQIVICSDR 236 Query: 324 YQEFSNIFEKDRALARRFQKIDI---TEPSIEETVQIINGLKPKYEAHHD------VRYT 374 + + E L RFQ + P E I + E H + + Sbjct: 237 EPQ--KLSEFQDRLVSRFQMGLVAKLEPPDEETRKSIARKML---EIEHGELPEEVLNFV 291 Query: 375 AKAVRAAVE----LAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVV 430 A+ V + +K + + K +D+ + + ++ K + ++ +V Sbjct: 292 AENVDDNLRRLRGAIIKLLVYKETTGKEVDLKEAILLLKDFIKPNRVKAMDPIDELIEIV 351 Query: 431 ARIARIPEKSVSQSDRDTLKNLGDRLKMLV 460 A++ +P + + + R+ R+ M V Sbjct: 352 AKVTGVPREEILSNSRNVKALTARRIGMYV 381 >2R44-A nrPDB Length = 331 Score = 42.5 bits (98), Expect = 6e-04, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 110/319 (34%), Gaps = 41/319 (12%) Query: 446 RDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVT 505 R+ +K + D + +V GQ I L I G L G G+ KT Sbjct: 15 RNKIKEVIDEVGKVVVGQKYMINRLLIGICTG-----------GHILLEGVPGLAKTLSV 63 Query: 506 VQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDE 565 L+K + ++ R ++ S LIG + G +L DE Sbjct: 64 NTLAKTMDLDFHRI---QFTPDLLPSDLIGTM---IYNQHKGNFEVKKGPVFSNFILADE 117 Query: 566 IEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNS 625 + ++ V + LL+ M +T + N LV+ T V + + L Sbjct: 118 VNRSPAKVQSALLECMQEKQVTIGD-TTYPLDNPFLVLATQNPVE--QEGTYPLPEAQVD 174 Query: 626 TDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVE---LQVQLDQKGVSLEV 682 M K T + ++ + +S + V K + + L+++ + V++ Sbjct: 175 RFMM---KIHLT--YLDKESELEVMRRVSNMNFNYQVQKIVSKNDVLEIRNEINKVTISE 229 Query: 683 SQE--------ARNWLAEKGYDRA-----MGARPMARVIQDNLKKPLANELLFGSLVDGG 729 S E A + AE G + GA A + + + K +A ++ Sbjct: 230 SLEKYIIELVFATRFPAEYGLEAEASYILYGASTRAAINLNRVAKAMAFFNNRDYVLPED 289 Query: 730 QVTVALDKEKNELTYGFQS 748 VA D + + +++ Sbjct: 290 IKEVAYDILNHRIILNYEA 308 >2V1U-A nrPDB Length = 387 Score = 42.5 bits (98), Expect = 7e-04, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 81/235 (34%), Gaps = 30/235 (12%) Query: 186 DPLIGREKELERAIQVLCRRRK----NNPLLVGESGVGKTAIAEGLAWRIVQ-------- 233 D L RE EL R +VL + +N LL G +G GKTA+A + R+ Sbjct: 19 DVLPHREAELRRLAEVLAPALRGEKPSNALLYGLTGTGKTAVARLVLRRLEARASSLGVL 78 Query: 234 ----------GDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILF 283 + P +A ++ + G G+ +R L +L I+ Sbjct: 79 VKPIYVNARHRETPYRVASAIAEAVGVRVPFTGLS-VGEVYERLVKRLSRLR--GIYIIV 135 Query: 284 IDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQK 343 +DEI + + + L + ++G T F E + + Sbjct: 136 LDEIDFLPKRPGGQDLLYRITRINQELGDRVWVSLVGITNSLGFVENLE--PRVKSSLGE 193 Query: 344 IDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVR--AAVELAVKYINDRHLPD 396 +++ P Q+ + L+ + E + V A A ++ + R D Sbjct: 194 VELVFPPYTAP-QLRDILETRAEEAFNPGVLDPDVVPLCAALAAREHGDARRALD 247 >5UJ7-C nrPDB Length = 436 Score = 42.5 bits (98), Expect = 8e-04, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 113/321 (35%), Gaps = 58/321 (18%) Query: 207 KNNPLLVGESGVGKTAIA-EGLAWRIVQGDVPEV-----------MADCTIY-----SLD 249 N+ L++G G GKT + L + +V E + D L+ Sbjct: 60 SNSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLN 119 Query: 250 IGSLLAGTKYRGDFEKRFKALLKQLEQ-----DTNSILFIDEIHTIIGAGA--------- 295 + +++ G K G F + LL+ L++ I +DE Sbjct: 120 LENVV-GDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFD 178 Query: 296 -ASGGQVDAA---------------NLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALAR 339 + Q A +K S +I ++ S + ++ IF++ +L Sbjct: 179 ISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPA 238 Query: 340 RFQ-KIDITEPSIEETVQII---NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLP 395 F K+ + E VQ + ++ + H ++ +++ + LA+ + H Sbjct: 239 EFPDKVFAEK--WNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPF 296 Query: 396 DKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDR 455 A+D+++ + +L + + V+ + + IA + + + + + + Sbjct: 297 MTAVDLMEAS----QLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNE 352 Query: 456 LKMLVFGQDKAIEALTEAIKM 476 + V + ++ + + M Sbjct: 353 FQKFVQRKAHSVYNFEKPVVM 373 >1SXJ-A nrPDB Length = 516 Score = 41.3 bits (95), Expect = 0.001, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 40/96 (41%), Gaps = 10/96 (10%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD---CTIYSLDIGSLLAGTKYRGDFEKRF 267 +L G G+GKT A +A + + + +D T+ + + + L G F+ Sbjct: 81 MLYGPPGIGKTTAAHLVAQELGYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHN- 139 Query: 268 KALLKQLEQD--TNSILFIDEIHTIIGAGAASGGQV 301 ++ + + ++ +DE+ + G GQ+ Sbjct: 140 ----EEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQL 171 Score = 39.4 bits (90), Expect = 0.006, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 38/85 (44%), Gaps = 10/85 (11%) Query: 492 LFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIG------APPGYVGFDQ 545 + GP G+GKT +++ LG ++L + S+ + ++ + + GY ++ Sbjct: 81 MLYGPPGIGKTTAAHLVAQELGYDILEQNASDVRSKTLLNAGVKNALDNMSVVGYFKHNE 140 Query: 546 GGLLTDAVIKHPHAVLLLDEIEKAH 570 + H V+++DE++ Sbjct: 141 EAQNLNG----KHFVIIMDEVDGMS 161 >1SXJ-D nrPDB Length = 353 Score = 41.3 bits (95), Expect = 0.002, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 8/126 (6%) Query: 463 QDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL-GIELLR--- 518 + A A+ + + L + P LF GP G GKT + L+K L G +L++ Sbjct: 35 NLDEVTAQDHAVTVLKKTLKSANLP--HMLFYGPPGTGKTSTILALTKELYGPDLMKSRI 92 Query: 519 --FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNI 576 + S+ V + + P+ +++LDE + D + Sbjct: 93 LELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSA 152 Query: 577 LLQVMD 582 L + M+ Sbjct: 153 LRRTME 158 Score = 37.1 bits (84), Expect = 0.029, Method: Composition-based stats. Identities = 17/129 (13%), Positives = 42/129 (32%), Gaps = 12/129 (9%) Query: 177 NQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDV 236 + R +D + ++ + + L + L G G GKT+ L + D Sbjct: 28 VEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPD- 86 Query: 237 PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE----QDTNS----ILFIDEIH 288 + I L+ + R + + + + ++ I+ +DE Sbjct: 87 ---LMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEAD 143 Query: 289 TIIGAGAAS 297 ++ ++ Sbjct: 144 SMTADAQSA 152 >1SXJ-C nrPDB Length = 340 Score = 41.0 bits (94), Expect = 0.002, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 68/209 (32%), Gaps = 23/209 (11%) Query: 177 NQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDV 236 + R +D + G+ + + + + + + L G G GKT+ LA I + Sbjct: 16 VEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNY 75 Query: 237 PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAA 296 + + L+ R + +Q+ ++ +DE + Sbjct: 76 SNM-----VLELNASDDRGIDVVRNQIKDFAST--RQIFSKGFKLIILDEADAM------ 122 Query: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 + +A + + + + Y + RFQ + + +IE + Sbjct: 123 TNAAQNALRRVIERYTKNTRFCVLA-NYAHKLTPALLSQCTRFRFQP--LPQEAIERRIA 179 Query: 357 IINGLKPKYEAHHDVRYTAKAVRAAVELA 385 H ++ + A +A +EL+ Sbjct: 180 -------NVLVHEKLKLSPNAEKALIELS 201 Score = 33.6 bits (75), Expect = 0.36, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 9/57 (15%) Query: 459 LVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIE 515 V+GQ++ I + + + + + LF GP G GKT V L++ + + Sbjct: 26 EVYGQNEVITTVRKFVDEGK---------LPHLLFYGPPGTGKTSTIVALAREIYGK 73 >4UPB-C nrPDB Length = 500 Score = 40.6 bits (93), Expect = 0.002, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 45/121 (37%), Gaps = 10/121 (8%) Query: 490 SFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGG-- 547 S GP G+ K+ + +L K F+ M R + + P G Sbjct: 43 SVFLLGPPGIAKSLIARRL-KFAFQNARAFEY--LMTRFSTPEEVFGPLSIQALKDEGRY 99 Query: 548 -LLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDN-NGRKADFRNVVLVMTT 605 LT + V L DEI KA P + N LL ++ + + K R +LV + Sbjct: 100 ERLTSGYLPEAEIVFL-DEIWKAGPAILNTLLTAINERQFRNGAHVEKIPMR--LLVAAS 156 Query: 606 N 606 N Sbjct: 157 N 157 Score = 35.6 bits (80), Expect = 0.096, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 81/255 (31%), Gaps = 29/255 (11%) Query: 187 PLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGL--AWRIVQGDVPEVMADCT 244 L R + + L + L+G G+ K+ IA L A++ + + T Sbjct: 23 GLYERSHAIRLCL--LAALSGESVFLLGPPGIAKSLIARRLKFAFQNARAFEYLMTRFST 80 Query: 245 IYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEI----HTIIGAGAASGGQ 300 + + K G +E+ L + E I+F+DEI I+ + + Sbjct: 81 PEEVFGPLSIQALKDEGRYERLTSGYLPEAE-----IVFLDEIWKAGPAILNTLLTAINE 135 Query: 301 VDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITE-PSIEETVQIIN 359 N ++ V S E D +L + ++ I + Sbjct: 136 RQFRNGAHVEKIPMRLLVAASNELPEA------DSSLEALYDRMLIRLWLDKVQDKANFR 189 Query: 360 GLKPKYEAHHDVRYTAKAVRAAVELAVKY---INDRHLPDKAIDVIDEAGARARLMPVSK 416 + + +D A++ E ++ I + LPD ++I + K Sbjct: 190 SMLTSQQDEND-NPVPDALQVTDEEYERWQKEIGEITLPDHVFELI-----FMLRQQLDK 243 Query: 417 RKKTVNVADIESVVA 431 V+D A Sbjct: 244 LPDAPYVSDRRWKKA 258 >6QI8-A nrPDB Length = 456 Score = 40.6 bits (93), Expect = 0.003, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 8/101 (7%) Query: 156 QPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNN------ 209 ++ ++ + + LA+ L+G+E A V+ K+ Sbjct: 8 STTKTQRIASHSHVKGLGLDESGLAKQAA-SGLVGQEN-AREACGVIVELIKSKKMAGRA 65 Query: 210 PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDI 250 LL G G GKTA+A +A + M +YS +I Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEI 106 Score = 36.7 bits (83), Expect = 0.039, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 425 DIESVVARIARIPEKSVSQSDRDTLKN--LGDRLKMLVFGQDKAIEALTEAIKMARAGLG 482 IE V + S S L L + + GQ+ A EA +++ + Sbjct: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVEL----IK 57 Query: 483 HEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIEL 516 + + L AGP G GKT + + +++ LG ++ Sbjct: 58 SKKMAGRAVLLAGPPGTGKTALALAIAQELGSKV 91 Score = 31.3 bits (69), Expect = 1.8, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%) Query: 256 GTKYRGDFEKRFKALLKQ-LEQDTNSILFIDEIHTI 290 K RG+ K + Q + + +LF+DE+H + Sbjct: 272 TDKLRGEINKVVNKYIDQGIAELVPGVLFVDEVHML 307 >5C3C-A nrPDB Length = 281 Score = 40.6 bits (93), Expect = 0.003, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 105/278 (37%), Gaps = 43/278 (15%) Query: 468 EALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMER 527 A+ + I++ RAG P+ + GPTG GK+ ++ L L+ +E M Sbjct: 31 RAVQDEIELYRAGY-EARIPM---MLKGPTGCGKSRFVEHMAWKLNRPLITIACNEDM-- 84 Query: 528 HTVSRLIGAPPGYVGFDQGGLLTD---AVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNG 584 T S L+G Y+ G D V A+ LDEI +A D ++ + D+ Sbjct: 85 -TASDLVGR---YLLDKDGTRWQDGPLTVAARIGAICYLDEIVEARQDTIVVIHPLTDHR 140 Query: 585 TL--TDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRN 642 + + G + ++ + + M+++K+ F Sbjct: 141 RVLPLEKKGELVEAHPDFQIVIS---------------YNPGYQSLMKDLKQSTKQRF-G 184 Query: 643 RLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGAR 702 LD FD+ D+ ++V + +K V + +Q+ARN L G D + R Sbjct: 185 ALD----FDYPKPDIEAEIVSHE-AGVDKDTAEKLVQI--AQKARN-LKGHGLDEGLSTR 236 Query: 703 PMA---RVIQDNLKKPLA-NELLFGSLVDGGQVTVALD 736 + ++I + A L + D + ALD Sbjct: 237 LLVYAGKLIAKGVDARAACTMTLVNPITDDVDMRDALD 274 Score = 30.9 bits (68), Expect = 1.9, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 66/179 (36%), Gaps = 20/179 (11%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLA---GTKYRGDFEKRF 267 +L G +G GK+ E +AW++ + + + S +G L GT+++ Sbjct: 51 MLKGPTGCGKSRFVEHMAWKLNRPLITIACNEDMTASDLVGRYLLDKDGTRWQ------- 103 Query: 268 KALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKI-------RVIG 320 L + +I ++DEI + + PL G++ +++ Sbjct: 104 DGPLTVAARIG-AICYLDEIVEARQDTIVVIHPLTDHRRVLPLEKKGELVEAHPDFQIVI 162 Query: 321 STTYQEFSNIFEKDRALARRFQ--KIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKA 377 S S + + ++ +RF D +P IE + K A V+ KA Sbjct: 163 SYNPGYQSLMKDLKQSTKQRFGALDFDYPKPDIEAEIVSHEAGVDKDTAEKLVQIAQKA 221 >3U5Z-B nrPDB Length = 324 Score = 40.2 bits (92), Expect = 0.003, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 67/198 (33%), Gaps = 37/198 (18%) Query: 192 EKELERAIQVLCRRRKNNPLLVGE-SGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLD- 249 +KE ++I + + +L G GKT +A+ L + + +DC I + Sbjct: 34 DKETFKSITSKGKIP--HIILHSPSPGTGKTTVAKALCHDVNADMMFVNGSDCKIDFVRG 91 Query: 250 -IGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIK 308 + + + + G ++ IDE + Q + ++ Sbjct: 92 PLTNFASAASFDG----------------RQKVIVIDEFD----RSGLAESQRHLRSFME 131 Query: 309 PLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETV----QIINGLKPK 364 S+ I +I + L R + I +P+ E+ + Q+I L Sbjct: 132 AYSSNCSI-IITANNIDGIIKP------LQSRCRVITFGQPTDEDKIEMMKQMIRRLTEI 184 Query: 365 YEAHHDVRYTAKAVRAAV 382 + H + V AA+ Sbjct: 185 CK-HEGIAIADMKVVAAL 201 >1IN6-A nrPDB Length = 334 Score = 40.2 bits (92), Expect = 0.004, Method: Composition-based stats. Identities = 56/292 (19%), Positives = 103/292 (35%), Gaps = 55/292 (18%) Query: 177 NQLARVGGIDPLIGRE---KELERAIQVLCRRRK--NNPLLVGESGVGKTAIAEGLAWRI 231 Q R +D IG+E K+L A++ R + ++ LL G G+G+T +A +A + Sbjct: 16 VQFLRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGRTTLAHIIASEL 75 Query: 232 VQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTII 291 Q ++ + D+ ++L + RGD +LFIDEIH + Sbjct: 76 -QTNIHVTSGPVLVKQGDMAAILTSLE-RGD------------------VLFIDEIHRLN 115 Query: 292 GAGAASGGQVDAANLIKPLLSSG-----------KIRVIGSTTYQEFSNIFEKDRALARR 340 A I ++ G ++G+TT L R Sbjct: 116 KAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVGATTRSGL-----LSSPLRSR 170 Query: 341 FQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAID 400 F I + TV+ + + + + DV A + R P AI Sbjct: 171 F-GIILELDFY--TVKELKEIIKRAASLMDVEIEDAAAEMIAK------RSRGTPRIAIR 221 Query: 401 VIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNL 452 + ++ + + + +E + I ++ + + DR LK + Sbjct: 222 LTKRVRDMLTVVKADRINTDIVLKTME-----VLNIDDEGLDEFDRKILKTI 268 >6QI9-D nrPDB Length = 463 Score = 39.8 bits (91), Expect = 0.005, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 26/49 (53%) Query: 210 PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTK 258 L+ G+ G GKTAIA G+A + +A I+SL++ A T+ Sbjct: 73 VLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQ 121 Score = 30.9 bits (68), Expect = 1.8, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Query: 454 DRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG 513 + + GQ A A ++M R G + L AG G GKT + + +++ALG Sbjct: 40 RQASQGMVGQLAARRAAGVVLEMIREGKIAGR----AVLIAGQPGTGKTAIAMGMAQALG 95 Query: 514 IE 515 + Sbjct: 96 PD 97 Score = 30.2 bits (66), Expect = 3.1, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 66/178 (37%), Gaps = 25/178 (14%) Query: 260 RGDFEKRFKALLKQLEQDT-----NSILFIDEIHTIIGAGAASGG---QVDAANLIKPLL 311 + + ++ A + + ++ +LFIDE+H + + + D A ++ Sbjct: 269 KSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMAT 328 Query: 312 SSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDV 371 + G R+ G++ + L R + T S ++T QI+ + + Sbjct: 329 NRGITRIRGTSYQSPHGIPID----LLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSE 384 Query: 372 RYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESV 429 R +E +++Y AI +I A R ++ V V DI+ V Sbjct: 385 DAYTVLTRIGLETSLRY---------AIQLITAASLVCRK----RKGTEVQVDDIKRV 429 >1U0J-A nrPDB Length = 267 Score = 39.8 bits (91), Expect = 0.005, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 12/118 (10%) Query: 116 QESQAAYL-LRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTT 174 QE QA+Y+ SR + + + + T++ + + G++ +E+ ++ Sbjct: 21 QEDQASYISFNAASNSRSQIKAALDNAGKIMSLTKT--------APDYLVGQQPVEDISS 72 Query: 175 NLN-QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 N ++ + G DP L A + +R N L G + GKT IAE +A + Sbjct: 73 NRIYKILELNGYDPQYAASVFLGWATKKFGKR--NTIWLFGPATTGKTNIAEAIAHTV 128 >5BQ5-A nrPDB Length = 189 Score = 39.8 bits (91), Expect = 0.005, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 10/97 (10%) Query: 191 REKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDI 250 E+ + + + RK N L +G G+GKT LA I + I + D+ Sbjct: 23 DERRIRELLTLSFIDRKENILFLGPPGIGKTH----LAISIGMEAIARGYKTYFITAHDL 78 Query: 251 GSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEI 287 + L G EK+ + ++L IDE+ Sbjct: 79 VNQLRRADQEGKLEKKLR------VFVKPTVLIIDEM 109 Score = 32.1 bits (71), Expect = 0.99, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 14/96 (14%) Query: 490 SFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLL 549 + LF GP G+GKT + + + + R + ++ H + + DQ G L Sbjct: 41 NILFLGPPGIGKTHLAISIG---MEAIARGYKTYFITAHDLVNQLRRA------DQEGKL 91 Query: 550 TDAVI--KHPHAVLLLDEIE--KAHPDVFNILLQVM 581 + P VL++DE+ K P+ + L QV+ Sbjct: 92 EKKLRVFVKP-TVLIIDEMGYLKLDPNSAHYLFQVI 126 >4L4U-A nrPDB Length = 447 Score = 39.8 bits (91), Expect = 0.005, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 115/316 (36%), Gaps = 56/316 (17%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 +E + I + E + + + L+ D + + ++ + E IK + Sbjct: 113 LEEIELTINKAIEHRKLRKENELLRREKDLKEEEYVFESPKMKEILEKIKK----ISCAE 168 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSKA---------------LGIELLRFDMSEYMERHTV 530 PV L G +GVGK V + K+ + ++ ++ Y E+ Sbjct: 169 CPV---LITGESGVGKEVVARLIHKSSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAF 224 Query: 531 SRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 + + + G+ GG L LDEI + + LL+V+++G Sbjct: 225 TGAVSSKEGFFELADGGTL------------FLDEIGELSLEAQAKLLRVIESGKFYRLG 272 Query: 591 GRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWF 650 GRK NV ++ TN ++E ++ G +D + +I P R R ++II Sbjct: 273 GRKEIEVNVRILAATNRNIKELVKE--GKFREDLYYRL--GVIEIEIPPLRERKEDII-- 326 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMG-ARPMARVIQ 709 L+ + + K+ E++ ++ A+ L G R + VI+ Sbjct: 327 -PLANHFLKKFSRKYAKEVE----------GFTKSAQELLLSY---PWYGNVRELKNVIE 372 Query: 710 DNLKKPLANELLFGSL 725 + + G L Sbjct: 373 RAVLFSEGKFIDRGEL 388 Score = 31.7 bits (70), Expect = 1.1, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 55/154 (35%), Gaps = 7/154 (4%) Query: 210 PLLV-GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFK 268 P+L+ GESGVGK +A + + P V + DI +G F Sbjct: 170 PVLITGESGVGKEVVARLIHKSSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVS 229 Query: 269 ALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKI----RVIGSTTY 324 + E LF+DEI + A +V + L +I R++ +T Sbjct: 230 SKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNR 289 Query: 325 Q--EFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 E + L R I+I P + E + Sbjct: 290 NIKELVKEGKFREDLYYRLGVIEIEIPPLRERKE 323 >6GEJ-U nrPDB Length = 471 Score = 39.4 bits (90), Expect = 0.006, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 69/182 (37%), Gaps = 13/182 (7%) Query: 149 QSSDPGSQPNSEEQA--GGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRR 206 Q+SDP + + + + + N R + ++G+ + RA V+ + Sbjct: 4 QTSDPNETSDLKSLSLIAAHSHITGLGLDENLQPRPTS-EGMVGQL-QARRAAGVILKMV 61 Query: 207 KNN------PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYR 260 +N L+ G GKTA+A G++ + + +A I+SL++ A T+ Sbjct: 62 QNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQ-- 119 Query: 261 GDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIG 320 F K +K+ + + +I I G G ++ + G + G Sbjct: 120 -AFRKSIGIKIKEETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDG 178 Query: 321 ST 322 T Sbjct: 179 LT 180 Score = 31.7 bits (70), Expect = 1.1, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 4/60 (6%) Query: 457 KMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIEL 516 + GQ +A A +KM + G + L AGP GKT + + +S++LG ++ Sbjct: 41 SEGMVGQLQARRAAGVILKMVQNGTIAGR----AVLVAGPPSTGKTALAMGVSQSLGKDV 96 >1NY5-A nrPDB Length = 387 Score = 39.4 bits (90), Expect = 0.006, Method: Composition-based stats. Identities = 59/316 (18%), Positives = 115/316 (36%), Gaps = 56/316 (17%) Query: 426 IESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEH 485 +E + I + E + + + L+ D + + ++ + E IK + Sbjct: 105 LEEIELTINKAIEHRKLRKENELLRREKDLKEEEYVFESPKMKEILEKIKK----ISCAE 160 Query: 486 KPVGSFLFAGPTGVGKTEVTVQLSK---------------ALGIELLRFDMSEYMERHTV 530 PV L G +GVGK V + K ++ ++ ++ Y E+ Sbjct: 161 CPV---LITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAF 216 Query: 531 SRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN 590 + + + G+ GG L LDEI + + LL+V+++G Sbjct: 217 TGAVSSKEGFFELADGGTL------------FLDEIGELSLEAQAKLLRVIESGKFYRLG 264 Query: 591 GRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWF 650 GRK NV ++ TN ++E ++ G +D + +I P R R ++II Sbjct: 265 GRKEIEVNVRILAATNRNIKELVKE--GKFREDLYYRL--GVIEIEIPPLRERKEDII-- 318 Query: 651 DHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMG-ARPMARVIQ 709 L+ + + K+ E++ ++ A+ L G R + VI+ Sbjct: 319 -PLANHFLKKFSRKYAKEVE----------GFTKSAQELLLSY---PWYGNVRELKNVIE 364 Query: 710 DNLKKPLANELLFGSL 725 + + G L Sbjct: 365 RAVLFSEGKFIDRGEL 380 Score = 31.3 bits (69), Expect = 1.5, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 55/154 (35%), Gaps = 7/154 (4%) Query: 210 PLLV-GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFK 268 P+L+ GESGVGK +A + + P V + DI +G F Sbjct: 162 PVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVS 221 Query: 269 ALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKI----RVIGSTTY 324 + E LF+DEI + A +V + L +I R++ +T Sbjct: 222 SKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNR 281 Query: 325 Q--EFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 E + L R I+I P + E + Sbjct: 282 NIKELVKEGKFREDLYYRLGVIEIEIPPLRERKE 315 >1KAG-A nrPDB Length = 173 Score = 39.4 bits (90), Expect = 0.006, Method: Composition-based stats. Identities = 37/176 (21%), Positives = 62/176 (35%), Gaps = 18/176 (10%) Query: 207 KNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKR 266 K N LVG G GK+ I LA ++ D+G + G F R Sbjct: 4 KRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEG-FRDR 62 Query: 267 FKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQE 326 + ++ +L + +L A+GG + + LS+ + V TT ++ Sbjct: 63 EEKVINELTEKQGIVL-------------ATGGGSVKSRETRNRLSARGVVVYLETTIEK 109 Query: 327 FSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAV 382 ++D ++ + + P E + N P YE DV A V Sbjct: 110 QLARTQRD----KKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAKV 161 >4QHS-A nrPDB Length = 267 Score = 39.4 bits (90), Expect = 0.006, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 80/224 (35%), Gaps = 47/224 (20%) Query: 457 KMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL-------- 508 +V K+++ L A K+A+ + + GP+G GK ++ + Sbjct: 15 SHMVVADTKSLKLLALADKVAKTD--------ANVMILGPSGSGKEVMSRYIHNASPRKE 66 Query: 509 -------SKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVL 561 A+ +L + Y E+ + + A PG QGG + Sbjct: 67 GPFIAINCAAIPDNMLEATLFGY-EKGAFTGAVQACPGKFEQAQGG------------TI 113 Query: 562 LLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIH 621 LLDEI + ++ LL+V+ + RK+ +V ++ T+N + G Sbjct: 114 LLDEISEMDLNLQAKLLRVLQEREVERLGSRKSIKLDVRVLATSN--RDLKQYVQAGHFR 171 Query: 622 QDNSTDAMEEIKKIFT---PEFRNRLDNI-IWFDHLSTDVIHQV 661 +D +F P R D+I +HL ++ Sbjct: 172 EDLYYRL-----NVFPLTWPALCERKDDIEPLANHLIERHCKKL 210 Score = 37.5 bits (85), Expect = 0.023, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 34/83 (40%) Query: 205 RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFE 264 + N +++G SG GK ++ + + + P + +C ++ +G F Sbjct: 36 KTDANVMILGPSGSGKEVMSRYIHNASPRKEGPFIAINCAAIPDNMLEATLFGYEKGAFT 95 Query: 265 KRFKALLKQLEQDTNSILFIDEI 287 +A + EQ + +DEI Sbjct: 96 GAVQACPGKFEQAQGGTILLDEI 118 >1OJL-A nrPDB Length = 304 Score = 39.4 bits (90), Expect = 0.007, Method: Composition-based stats. Identities = 56/276 (20%), Positives = 100/276 (36%), Gaps = 49/276 (17%) Query: 210 PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDF---EKR 266 L+ G+SG GK +A L + D P V +C + + +G F +KR Sbjct: 28 VLIHGDSGTGKELVARALHACSARSDRPLVTLNCAALNESLLESELFGHEKGAFTGADKR 87 Query: 267 FKALLKQLEQDTNSILFIDEIHTIIGAGA----ASGGQVDAANLIKPLLSSGKIRVIGST 322 + + + LF+DEI I + + + + S +R+I +T Sbjct: 88 REGRFVEAD---GGTLFLDEIGDISPLMQVRLLRAIQEREVQRVGSNQTISVDVRLIAAT 144 Query: 323 TYQEFSNI----FEKDRALARRFQKIDITEPSIEET-------------------VQIIN 359 + F +D L R + I PS+ + +++ Sbjct: 145 HRDLAEEVSAGRFRQD--LYYRLNVVAIEMPSLRQRREDIPLLADHFLRRFAERNRKVVK 202 Query: 360 GLKPK-------YEAHHDVRYTAKAV-RAAVELAVKYINDRHLPDKAIDVIDEAGARARL 411 G P+ Y+ ++R A+ RA V L +YI++R LP + + Sbjct: 203 GFTPQAMDLLIHYDWPGNIRELENAIERAVVLLTGEYISERELPLAIAATPIKTEYSGEI 262 Query: 412 MPVSKRKKTVNVADIES------VVARIARIPEKSV 441 P+ +K V +A +E AR I K++ Sbjct: 263 QPLVDVEKEVILAALEKTGGNKTEAARQLGITRKTL 298 >4LZZ-A nrPDB Length = 268 Score = 38.6 bits (88), Expect = 0.011, Method: Composition-based stats. Identities = 49/251 (19%), Positives = 92/251 (36%), Gaps = 49/251 (19%) Query: 491 FLFAGPTGVGKTEVTVQLSK---------------ALGIELLRFDMSEYMERHTVSRLIG 535 L G +GVGK V + K ++ ++ ++ Y E+ + + Sbjct: 44 VLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVS 102 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 + G+ GG L LDEI + + LL+V+++G GRK Sbjct: 103 SKEGFFELADGGTL------------FLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEI 150 Query: 596 FRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLST 655 NV ++ TN ++E ++ G +D + +I P R R ++II L+ Sbjct: 151 EVNVRILAATNRNIKELVKE--GKFREDLYYRL--GVIEIEIPPLRERKEDII---PLAN 203 Query: 656 DVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMG-ARPMARVIQDNLKK 714 + + K+ E++ ++ A+ L G R + VI+ + Sbjct: 204 HFLKKFSRKYAKEVE----------GFTKSAQELLLSY---PWYGNVRELKNVIERAVLF 250 Query: 715 PLANELLFGSL 725 + G L Sbjct: 251 SEGKFIDRGEL 261 Score = 31.3 bits (69), Expect = 1.5, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 55/154 (35%), Gaps = 7/154 (4%) Query: 210 PLLV-GESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFK 268 P+L+ GESGVGK +A + + P V + DI +G F Sbjct: 43 PVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVS 102 Query: 269 ALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKI----RVIGSTTY 324 + E LF+DEI + A +V + L +I R++ +T Sbjct: 103 SKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNR 162 Query: 325 Q--EFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 E + L R I+I P + E + Sbjct: 163 NIKELVKEGKFREDLYYRLGVIEIEIPPLRERKE 196 >4ZPX-A nrPDB Length = 413 Score = 38.3 bits (87), Expect = 0.014, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 185 IDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 ID +IG+E +E +K + LL+GE G GK+ + + +A + + +++ Sbjct: 40 IDQVIGQEHAVEVI--KTAANQKRHVLLIGEPGTGKSMLGQAMAELLPTETLEDIL 93 Score = 34.8 bits (78), Expect = 0.14, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 17/111 (15%) Query: 450 KNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLS 509 + ++L V GQ+ A+E + A R L G G GK+ + ++ Sbjct: 33 IEVPEKLIDQVIGQEHAVEVIKTAANQKR-----------HVLLIGEPGTGKSMLGQAMA 81 Query: 510 KALGIELLR-FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHA 559 + L E L + E + R+ P QG + + + + Sbjct: 82 ELLPTETLEDILVFPNPEDENMPRIKTVPAC-----QGRRIVEKYREKAKS 127 >3IIK-A nrPDB Length = 180 Score = 37.9 bits (86), Expect = 0.015, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 74/198 (37%), Gaps = 37/198 (18%) Query: 488 VGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGG 547 + + L G GVGKT + +L+ G++ + E+ Y G+D+ Sbjct: 11 LPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQL-----------YDGYDE-- 57 Query: 548 LLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF-----RNVVLV 602 + +LDE ++ ++ N Q+ + G + D +G DF ++V V Sbjct: 58 ---------EYDCPILDE-DRVVDELDN---QMREGGVIVDYHG--CDFFPERWFHIVFV 102 Query: 603 MTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHL---STDVIH 659 + T+ V ++ G + + + EI ++ E I L + + Sbjct: 103 LRTDTNVLYERLETRGYNEKKLTDNIQCEIFQVLYEEATASYKEEIV-HQLPSNKPEELE 161 Query: 660 QVVDKFIVELQVQLDQKG 677 VD+ + ++ + Sbjct: 162 NNVDQILKWIEQWIKDHN 179 Score = 33.6 bits (75), Expect = 0.33, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 20/88 (22%) Query: 209 NPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTK-YRGDFEKRF 267 N LL G GVGKT + + LA + + +++G L + Y G E+ Sbjct: 13 NILLTGTPGVGKTTLGKELASKSG------------LKYINVGDLAREEQLYDGYDEEYD 60 Query: 268 KALLKQLEQDTNSILFIDEIHTIIGAGA 295 +L + +DE+ + G Sbjct: 61 CPILDEDR-------VVDELDNQMREGG 81 >6MFV-A nrPDB Length = 653 Score = 37.1 bits (84), Expect = 0.027, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 57/147 (38%), Gaps = 25/147 (17%) Query: 189 IGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSL 248 +GR++EL R K ++ G +G+GKT++A A+ + D ++ Sbjct: 16 VGRKRELSII-----RNAKGVVVIYGIAGIGKTSLA-AKAFPNAYWYNVTGLEDFKYFAW 69 Query: 249 DIGSLLAGTKYR---------GDFEKRFKALLKQLEQDTNSILFIDEIHTIIG------- 292 +G L+ + G+ E L+ + + T +I+ ID+ H Sbjct: 70 QLGLFLSSIGFEDLLEYLRGGGNNENDIFKLITEGIEKTGAIIIIDDFHKFQDEKVNYLL 129 Query: 293 ---AGAASGGQVDAANLIKPLLSSGKI 316 A G+V I+P L + + Sbjct: 130 SYLAPRIKKGKVIITTRIRPNLGNEGV 156 >4Y0A-A nrPDB Length = 179 Score = 37.1 bits (84), Expect = 0.028, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 7/59 (11%) Query: 488 VGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQG 546 + + GP G GKT V L++ LG E L D H + R GA ++ +G Sbjct: 8 LPNIYLVGPMGAGKTTVGRHLAELLGREFLDSD-------HEIERKTGATIPWIFEKEG 59 >3K1J-A nrPDB Length = 604 Score = 37.1 bits (84), Expect = 0.029, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 185 IDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 ID +IG+E +E +K + LL+GE G GK+ + + +A + + +++ Sbjct: 40 IDQVIGQEHAVEVI--KTAANQKRHVLLIGEPGTGKSMLGQAMAELLPTETLEDIL 93 Score = 33.6 bits (75), Expect = 0.35, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 39/111 (35%), Gaps = 17/111 (15%) Query: 450 KNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLS 509 + ++L V GQ+ A+E + A R L G G GK+ + ++ Sbjct: 33 IEVPEKLIDQVIGQEHAVEVIKTAANQKR-----------HVLLIGEPGTGKSMLGQAMA 81 Query: 510 KALGIELLR-FDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHA 559 + L E L + E + R+ P QG + + + + Sbjct: 82 ELLPTETLEDILVFPNPEDENMPRIKTVPAC-----QGRRIVEKYREKAKS 127 >5EP0-A nrPDB Length = 396 Score = 36.3 bits (82), Expect = 0.054, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 91/266 (34%), Gaps = 21/266 (7%) Query: 102 EVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTR-KDEPTQSSDPGSQPNSE 160 ++TG VL + E + ++ H + V +P ++ N Sbjct: 60 DMTGMEVLERVRKEHGNVPVVIMTAHGSIDIAVEAIRYGAQDFLIKPCEADRLRITVNKA 119 Query: 161 EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVL--CRRRKNNPLLVGESGV 218 +A + T+ ++ + IG ++ +V+ K + GESG Sbjct: 120 LKAESKSN----TSTQSKQSDGAQYQGFIGNSLPMQAVYRVIESAASSKATVFITGESGT 175 Query: 219 GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDI--GSLLAGTK--YRGDFEKRFKALLKQL 274 GK AE + + D P + +C D+ L K + G +R A+ Sbjct: 176 GKEVCAEAIHAASPRHDKPFIALNCAAIPKDLIESELFGHVKGAFTGASTERQGAV---- 231 Query: 275 EQDTNSILFIDEI-HTIIGAGAASGGQVDAANLIK---PLLSSGKIRVIGSTTYQEFSNI 330 E N L +DE+ + + + K +SS +R + +T + + Sbjct: 232 EMAHNGTLMLDELCEMDLDLQSKLLRFIQTGTYQKVGSSKMSSVDVRFVCATNRNPWEEV 291 Query: 331 FE--KDRALARRFQKIDITEPSIEET 354 E L R I I+ P + E Sbjct: 292 QEGRFREDLYYRLHVIPISLPPLRER 317 >3CRQ-A nrPDB Length = 323 Score = 35.9 bits (81), Expect = 0.066, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 18/32 (56%) Query: 489 GSFLFAGPTGVGKTEVTVQLSKALGIELLRFD 520 + GPT GKT++ + L+ AL EL+ D Sbjct: 6 PAIFLMGPTAAGKTDLAMALADALPCELISVD 37 >6BLB-A nrPDB Length = 355 Score = 35.2 bits (79), Expect = 0.097, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 78/219 (35%), Gaps = 48/219 (21%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 L+ G G+GKT +A +A + +I S L GD L Sbjct: 63 LIFGPPGLGKTTLANIIAQEM----------GVSIKSTSGPVLERP----GDLAALLTNL 108 Query: 271 LKQLEQDTNSILFIDEIHTIIGAGAASG-------------GQVDAANLIKPLLSSGKIR 317 + +LF+DEIH + G+ AA IK L + Sbjct: 109 ------EAGDVLFVDEIHRLSPIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTL- 161 Query: 318 VIGSTTYQEFSNIFEKDR-ALARRFQKIDI-TEPSIEETVQIINGLKPKYEAHHDVRYTA 375 +G+TT +DR + +R + ++ +I I GL+ + + ++ A Sbjct: 162 -VGATTRAGMLTNPLRDRFGIVQRLEFYNVEDLATIVSRSAGILGLEIEPQGAAEIAKRA 220 Query: 376 KAVRAAVELAVKYIND-----------RHLPDKAIDVID 403 + ++ + D R + DKA++++D Sbjct: 221 RGTPRIANRLLRRVRDFAEVRGQGDITRVIADKALNLLD 259 Score = 32.5 bits (72), Expect = 0.66, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 18/92 (19%) Query: 492 LFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTD 551 L GP G+GKT + +++ +G+ + + S + PG D LLT+ Sbjct: 63 LIFGPPGLGKTTLANIIAQEMGVSI-----------KSTSGPVLERPG----DLAALLTN 107 Query: 552 AVIKHPHAVLLLDEIEKAHPDVFNILLQVMDN 583 VL +DEI + P V +L M++ Sbjct: 108 L---EAGDVLFVDEIHRLSPIVEEVLYPAMED 136 >5JZV-A nrPDB Length = 206 Score = 35.2 bits (79), Expect = 0.12, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 79/217 (36%), Gaps = 42/217 (19%) Query: 469 ALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERH 528 ++T +M R + + L G GVGKT + +L+ G++ + E+ Sbjct: 23 SMTGGQQMGRGSMLLPN-----ILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQL 77 Query: 529 TVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTD 588 Y G+D+ + +LDE ++ ++ N Q+ + G + Sbjct: 78 -----------YDGYDE-----------EYDCPILDE-DRVVDELDN---QMREGGVIVG 111 Query: 589 NNGRKADF-----RNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNR 643 +G DF ++V V+ T+ V ++ G + + + EI ++ E Sbjct: 112 YHG--CDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNIQCEIFQVLYEEATAS 169 Query: 644 LDNIIWFDHL---STDVIHQVVDKFIVELQVQLDQKG 677 I L + + VD+ + ++ + Sbjct: 170 YKEEIV-HQLPSNKPEELENNVDQILKWIEQWIKDHN 205 Score = 33.6 bits (75), Expect = 0.29, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 35/94 (37%), Gaps = 20/94 (21%) Query: 209 NPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTK-YRGDFEKRF 267 N LL G GVGKT + + LA + + +++G L + Y G E+ Sbjct: 39 NILLTGTPGVGKTTLGKELASKSG------------LKYINVGDLAREEQLYDGYDEEYD 86 Query: 268 KALLKQLEQDTNSILFIDEIHTIIGAGAASGGQV 301 +L + +DE+ + G G Sbjct: 87 CPILDEDR-------VVDELDNQMREGGVIVGYH 113 >2GZA-A nrPDB Length = 361 Score = 34.4 bits (77), Expect = 0.17, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 52/161 (32%), Gaps = 15/161 (9%) Query: 71 ASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVS 130 AS E P L ++ ++ + ++ VL AI E E Sbjct: 54 ASAWEYYAVPNLDYEHLISLGTATARFVDQDISDSRPVLSAILPMGERIQIVRPPACEHG 113 Query: 131 RLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIG 190 + V TR+ D Q + + + F L L G + Sbjct: 114 TISVTIRKPSFTRRTLE----DYAQQGFFKHVRPMSKSLTPFEQELLALKEAGDYMSFLR 169 Query: 191 REKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 R +LER I ++ GE+G GKT + + L I Sbjct: 170 RAVQLERVI-----------VVAGETGSGKTTLMKALMQEI 199 >3BE4-A nrPDB Length = 217 Score = 34.4 bits (77), Expect = 0.19, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 8/81 (9%) Query: 207 KNNPLLVGESGVGKTAIAE------GLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYR 260 K+N +L+G G GK E GLA + E + + T L+ S++ + Sbjct: 5 KHNLILIGAPGSGKGTQCEFIKKEYGLAHLSTGDMLREAIKNGTKIGLEAKSIIESGNFV 64 Query: 261 GDFEKRFKALLKQLEQDTNSI 281 GD + L+K+ + Sbjct: 65 GD--EIVLGLVKEKFDLGVCV 83 >5EP3-A nrPDB Length = 256 Score = 34.4 bits (77), Expect = 0.21, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 64/178 (35%), Gaps = 16/178 (8%) Query: 189 IGREKELERAIQVL--CRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIY 246 IG ++ +V+ K + GESG GK AE + + D P + +C Sbjct: 4 IGNSLPMQAVYRVIESAASSKATVFITGESGTGKEVCAEAIHAASPRHDKPFIALNCAAI 63 Query: 247 SLDI--GSLLAGTK--YRGDFEKRFKALLKQLEQDTNSILFIDEI-HTIIGAGAASGGQV 301 D+ L K + G +R A+ E N L +DE+ + + + Sbjct: 64 PKDLIESELFGHVKGAFTGASTERQGAV----EMAHNGTLMLDELCEMDLDLQSKLLRFI 119 Query: 302 DAANLIK---PLLSSGKIRVIGSTTYQEFSNIFE--KDRALARRFQKIDITEPSIEET 354 K +SS +R + +T + + E L R I I+ P + E Sbjct: 120 QTGTYQKVGSSKMSSVDVRFVCATNRNPWEEVQEGRFREDLYYRLHVIPISLPPLRER 177 >5M7N-A nrPDB Length = 454 Score = 34.0 bits (76), Expect = 0.21, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 58/173 (33%), Gaps = 12/173 (6%) Query: 417 RKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKM 476 R+ + + R+ + E+++ + LK L+ Q + + + A+ Sbjct: 97 RRGAYDFIEKPFKADRLILVAERAL---ETSKLKREVSDLRKRTGDQLELV-GTSLAMNQ 152 Query: 477 ARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL---SKALGIELLRFDMSEYMERHTVSRL 533 R + + GP+G GK V + S + + + L Sbjct: 153 LRQTIERVAPTNSRIMITGPSGAGKELVARAIHAQSSRANGPFVTVNAATITPERMEIEL 212 Query: 534 IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTL 586 G D G A+ + +L LDE+ + N +L+V+ + Sbjct: 213 FGTE-----MDGGERKVGALEEAHGGILYLDEVADMPRETQNKILRVLVDQQF 260 Score = 31.3 bits (69), Expect = 1.4, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 10/131 (7%) Query: 160 EEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRR--RKNNPLLVGESG 217 E+A +++ ++L R G L+G + + Q + R + ++ G SG Sbjct: 117 AERALETSKLKREVSDL--RKRTGDQLELVGTSLAMNQLRQTIERVAPTNSRIMITGPSG 174 Query: 218 VGKTAIAEGLAWRIVQGDVPE-VMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ 276 GK +A + + + + P + TI + L GT+ G E++ AL E+ Sbjct: 175 AGKELVARAIHAQSSRANGPFVTVNAATITPERMEIELFGTEMDG-GERKVGAL----EE 229 Query: 277 DTNSILFIDEI 287 IL++DE+ Sbjct: 230 AHGGILYLDEV 240 >4HI0-E nrPDB Length = 199 Score = 34.0 bits (76), Expect = 0.24, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 47/102 (46%), Gaps = 19/102 (18%) Query: 494 AGPTGVGKTEVTVQLSKALG---------IELLRFDMSEYMERHTVSRLIGAPP--GYVG 542 GP G GKT + L++ + ++ + +E+M +++V P +G Sbjct: 7 CGPVGSGKTALIEALTRHMSKDYDMAVITNDIYTKEDAEFMCKNSV------MPRERIIG 60 Query: 543 FDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNG 584 + GG A+ + A + L+ +E+ H N+ L ++++G Sbjct: 61 VETGGCPHTAIRE--DASMNLEAVEEMHGRFPNLELLLIESG 100 >3PFI-A nrPDB Length = 338 Score = 33.6 bits (75), Expect = 0.28, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 67/178 (37%), Gaps = 42/178 (23%) Query: 168 RMENFTTNLN--QLARVGGIDPLIGRE---KELERAIQVLCRRRK--NNPLLVGESGVGK 220 +E ++ + R D IG+E K L I +R + ++ L G +G+GK Sbjct: 9 EIEKYSFDETYETSLRPSNFDGYIGQESIKKNLNVFIAAAKKRNECLDHILFSGPAGLGK 68 Query: 221 TAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNS 280 T +A +++ + ++ A S D+ ++L Sbjct: 69 TTLANIISYEM-SANIKTTAAPMIEKSGDLAAILT-------------------NLSEGD 108 Query: 281 ILFIDEIHTIIGA------GAASGGQVD-------AANLIKPLLSSGKIRVIGSTTYQ 325 ILFIDEIH + A A ++D AA IK L + IG+TT Sbjct: 109 ILFIDEIHRLSPAIEEVLYPAMEDYRLDIIIGSGPAAQTIKIDLPKFTL--IGATTRA 164 Score = 29.8 bits (65), Expect = 4.3, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 24/127 (18%) Query: 461 FGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFD 520 GQ E++ + + + A ++ + LF+GP G+GKT + +S + + Sbjct: 32 IGQ----ESIKKNLNVFIAAAKKRNECLDHILFSGPAGLGKTTLANIISYEMSANI---- 83 Query: 521 MSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLL-DEIEKAHPDVFNILLQ 579 + AP ++ G L + +L DEI + P + +L Sbjct: 84 -----------KTTAAP----MIEKSGDLAAILTNLSEGDILFIDEIHRLSPAIEEVLYP 128 Query: 580 VMDNGTL 586 M++ L Sbjct: 129 AMEDYRL 135 >6GEJ-T nrPDB Length = 463 Score = 33.6 bits (75), Expect = 0.29, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 39/100 (39%), Gaps = 4/100 (4%) Query: 155 SQPNSEEQAGGEERMENFTTNLNQLAR--VGGIDPLIGREKELERAIQVLCRRRKNN--P 210 S + + ++ + + +A+ GG I + + ++ ++ + Sbjct: 16 SNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAI 75 Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDI 250 LL G GKTA+A ++ + + +YS+++ Sbjct: 76 LLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEV 115 >2GA8-A nrPDB Length = 359 Score = 33.6 bits (75), Expect = 0.29, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Query: 198 AIQVLCRRRKNN----PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLD 249 +Q+L R ++N +LVG G GK+ IAE L I + + + ++ Sbjct: 11 VLQLLDNRIEDNYRVCVILVGSPGSGKSTIAEELCQIINEKYHTFLSEHPNVIEVN 66 >3GP8-A nrPDB Length = 574 Score = 33.6 bits (75), Expect = 0.32, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 13/123 (10%) Query: 475 KMARAGLGHEHKPVGS-------FLFAGPTGVGKTEVTVQ---LSKALGIEL---LRFDM 521 K AR GL E V + G G GK+ T L+++LG+E+ Sbjct: 184 KKARKGLSEEQASVLDQLAGHRLVVLTGGPGTGKSTTTKAVADLAESLGLEVGLCAPTGK 243 Query: 522 SEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVM 581 + R +G+ G + + P+ +L++DE+ + LL + Sbjct: 244 AARRLGEVTGRTASTVHRLLGYGPQGFRHNHLEPAPYDLLIVDEVSMMGDALMLSLLAAV 303 Query: 582 DNG 584 G Sbjct: 304 PPG 306 >5FM7-A nrPDB Length = 464 Score = 33.6 bits (75), Expect = 0.36, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 19/42 (45%) Query: 209 NPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDI 250 LL G G GKTA+A ++ + + IYS ++ Sbjct: 68 GVLLAGGPGTGKTALALAISQELGTKIPFCPITGSEIYSTEV 109 Score = 31.3 bits (69), Expect = 1.8, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 67/177 (37%), Gaps = 20/177 (11%) Query: 256 GTKYRGDFEKRFKALLKQ-LEQDTNSILFIDEIHTI-IGAGAASGGQVDA--ANLIKPLL 311 K R + K + + Q + + +LFIDE H + I +++ A ++ Sbjct: 275 TDKLRMEINKVVQKYINQGVAELIPGVLFIDEAHMLDIECFTYLNKALESPIAPIVVLAS 334 Query: 312 SSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDV 371 + G + G+ + +R I +E +I+ ++ + E V Sbjct: 335 NRGIATIRGA---DDLKAAHGIPPDFLQRLLIIPTHPYEPDEIRRIVR-IRAQTE---GV 387 Query: 372 RYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIES 428 + T AV E V+ I+ R+ + ++ A AR+ + V+V DI Sbjct: 388 QLTDAAVDRVAEHGVR-ISLRY----CLQLLAPASILARVNG----RTQVDVQDIAE 435 Score = 29.8 bits (65), Expect = 4.6, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 6/57 (10%) Query: 461 FGQDKAIEALTEAIKMARAGLGHEHKPVG-SFLFAGPTGVGKTEVTVQLSKALGIEL 516 GQ A EA + + +A HK G L AG G GKT + + +S+ LG ++ Sbjct: 43 VGQCAAREACGVVVDLIKA-----HKMAGRGVLLAGGPGTGKTALALAISQELGTKI 94 >4BS1-B nrPDB Length = 173 Score = 33.2 bits (74), Expect = 0.38, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 58/148 (39%), Gaps = 30/148 (20%) Query: 491 FLFAGPTGVGKTEVTVQLSK---------------ALGIELLRFDMSEYMERHTVSRLIG 535 L G +GVGK V + K ++ ++ ++ Y E+ + + Sbjct: 27 VLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVS 85 Query: 536 APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKAD 595 + G+ GG L LDEI + + LL+V+++G GRK Sbjct: 86 SKEGFFELADGGTL------------FLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEI 133 Query: 596 FRNVVLVMTTNAGVRETERKSIGLIHQD 623 NV ++ TN ++E ++ G +D Sbjct: 134 EVNVRILAATNRNIKELVKE--GKFRED 159 >5EXS-A nrPDB Length = 260 Score = 33.2 bits (74), Expect = 0.41, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 69/193 (35%), Gaps = 24/193 (12%) Query: 206 RKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEK 265 + L++GESG GK +A L + + + P V +C ++ +G F Sbjct: 32 TDASVLILGESGTGKEVVARNLHYHSKRREGPFVPVNCGAIPAELLESELFGHEKGAFTG 91 Query: 266 RFKALLKQLEQDTNSILFIDEIH--------TIIGAGAASGGQVDAANLIKPLLSSGKIR 317 + + E LF+DEI ++ + +N + + +R Sbjct: 92 AITSRAGRFELANGGTLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQ----NVDVR 147 Query: 318 VIGSTTYQEFSNIFEKDRALAR----RFQKIDITEPSIEETVQ----IINGLKPKYEAHH 369 +I +T I +D R I + E V+ ++N L + E Sbjct: 148 IIAATHKNLEKMI--EDGTFREDLYYRLNVFPIEMAPLRERVEDIALLLNELISRMEHEK 205 Query: 370 D--VRYTAKAVRA 380 +R+ + A+ + Sbjct: 206 RGSIRFNSAAIMS 218 >5LKM-A nrPDB Length = 452 Score = 33.2 bits (74), Expect = 0.42, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 42/87 (48%), Gaps = 4/87 (4%) Query: 210 PLLVGESGVGKTAIAEGLAWRIVQ-GDVPEVMADCTIYSLDIGSLLAG---TKYRGDFEK 265 L+ G+ G+GK+ + ++ ++ Q G V V + + + + + G +++ E Sbjct: 91 VLIGGDPGIGKSTLLLQVSTQLSQVGTVLYVSGEESAQQIKLRAERLGDIDSEFYLYAET 150 Query: 266 RFKALLKQLEQDTNSILFIDEIHTIIG 292 +++ ++E+ L ID I TI+ Sbjct: 151 NMQSVRAEVERIQPDFLIIDSIQTIMS 177 >5EXX-A nrPDB Length = 343 Score = 32.9 bits (73), Expect = 0.49, Method: Composition-based stats. Identities = 49/302 (16%), Positives = 103/302 (34%), Gaps = 31/302 (10%) Query: 206 RKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEK 265 + L++GESG GK +A L + + + P V +C ++ +G F Sbjct: 32 TDASVLILGESGTGKEVVARNLHYHSKRREGPFVPVNCGAIPAELLESELFGHEKGAFTG 91 Query: 266 RFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSG----KIRVIGS 321 + + E LF+DEI + +V + + S+ +R+I + Sbjct: 92 AITSRAGRFELANGGTLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQNVDVRIIAA 151 Query: 322 TTYQEFSNIFEKDRALAR----RFQKIDITEPSIEETVQ----IINGLKPKYEAHHD--V 371 T I +D R I + E V+ ++N L + E + Sbjct: 152 THKNLEKMI--EDGTFREDLYYRLNVFPIEMAPLRERVEDIALLLNELISRMEHEKRGSI 209 Query: 372 RYTAKAVRAAVE-------LAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVN-- 422 R+ + A+ + + + +R VI + V + + Sbjct: 210 RFNSAAIMSLCRHDWPGNVRELANLVERLAIMHPYGVIGVGELPKKFRHVDDEDEQLASS 269 Query: 423 ----VADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQ--DKAIEALTEAIKM 476 + + ++ A + + ++ ++ LK+ L+ + Q D A + A + Sbjct: 270 LREELEERAAINAGLPGMDAPAMLPAEGLDLKDYLANLEQGLIQQALDDAGGVVARAAER 329 Query: 477 AR 478 R Sbjct: 330 LR 331 >1SXJ-B nrPDB Length = 323 Score = 32.9 bits (73), Expect = 0.50, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 69/206 (33%), Gaps = 22/206 (10%) Query: 177 NQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDV 236 + R + ++G ++ ++R Q+ + ++ G G+GKT LA ++ Sbjct: 12 VEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSY 71 Query: 237 PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAA 296 + + L+ R + + L L + I+ +DE ++ Sbjct: 72 ADG-----VLELNASDDRGIDVVRNQIKHFAQKKLH-LPPGKHKIVILDEADSM------ 119 Query: 297 SGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQ 356 + G A L S+ + + A+ R + + Sbjct: 120 TAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSQCAILR-----YSKLSDEDVLKR 174 Query: 357 IINGLKPKYEAHHDVRYTAKAVRAAV 382 ++ +K + DV+YT + A + Sbjct: 175 LLQIIKLE-----DVKYTNDGLEAII 195 >3TRF-A nrPDB Length = 185 Score = 32.9 bits (73), Expect = 0.58, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 74/195 (37%), Gaps = 21/195 (10%) Query: 485 HKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFD 544 K + + G G GKT V QL+K L Y + + GA ++ Sbjct: 2 KKNLTNIYLIGLMGAGKTSVGSQLAKLTKRIL-------YDSDKEIEKRTGADIAWIFEM 54 Query: 545 QGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMT 604 +G +A + E+ +A + NI+L L + N ++ VV+ +T Sbjct: 55 EG----EAGFRRRER-----EMIEALCKLDNIILATGGGVVLDEKNRQQISETGVVIYLT 105 Query: 605 TNAGVRETERKSIG-----LIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIH 659 + + G L ++NS + ++++ +I P ++ D + D L+ + Sbjct: 106 ASIDTQLKRIGQKGEMRRPLFIKNNSKEKLQQLNEIRKPLYQAMADLVYPTDDLNPRQLA 165 Query: 660 QVVDKFIVELQVQLD 674 + I + L+ Sbjct: 166 TQILVDIKQTYSDLE 180 >5U8S-7 nrPDB Length = 845 Score = 32.5 bits (72), Expect = 0.63, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 91/304 (29%), Gaps = 43/304 (14%) Query: 196 ERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLA 255 +R + R N L+G+ GV K+ + + + +I V + L + Sbjct: 442 KRVGDGMKIRGDINVCLMGDPGVAKSQLLKAIC-KISPRGVYTTGKGSSGVGLTAAVMKD 500 Query: 256 GTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLS--- 312 E + L N I IDE + + + +V I + Sbjct: 501 PVT----DEMILEG--GALVLADNGICCIDEFDKMDESDRTAIHEVMEQQTISISKAGIN 554 Query: 313 ---SGKIRVIGSTTYQEFSNI---------FEKDRALARRFQKID--ITEPSIEETVQII 358 + + ++ + + AL RF + + PS ++ ++ Sbjct: 555 TTLNARTSILAAAN-PLYGRYNPRLSPLDNINLPAALLSRFDILFLMLDIPSRDDDEKLA 613 Query: 359 NGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHL--PDKAIDVID-EAGARARLMPVS 415 + Y H+ + +YI P + V D A RL S Sbjct: 614 EHVT--YVHMHNKQPDLDFTPVEPSKMREYIAYAKTKRPVMSEAVNDYVVQAYIRLRQDS 671 Query: 416 KRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIK 475 KR+ + ++ + I L L L I+ + EA++ Sbjct: 672 KREMDSKFSFGQATPRTLLGI-------------IRLSQALAKLRLADMVDIDDVEEALR 718 Query: 476 MARA 479 + R Sbjct: 719 LVRV 722 >3DZD-A nrPDB Length = 368 Score = 32.5 bits (72), Expect = 0.69, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 64/179 (35%), Gaps = 32/179 (17%) Query: 194 ELERAIQVLCRRRKNNPLLVGESGVGKTAIA---------EGLAWRIVQGDVPEVMADCT 244 E++R I + + K L+ GESG GK +A +G + +P+ +A+ Sbjct: 140 EIKRLIPKIA-KSKAPVLITGESGTGKEIVARLIHRYSGRKGAFVDLNCASIPQELAESE 198 Query: 245 IYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAA-------S 297 ++ + G+ R K L+ +Q LF+DE+ + A + Sbjct: 199 LFGHEKGAFTGAL-------TRKKGKLELADQ---GTLFLDEVGELDQRVQAKLLRVLET 248 Query: 298 GGQVDAANLIKPLLSSGKIRVIGST--TYQEFSNIFEKDRALARRFQKIDITEPSIEET 354 G K + IRVI +T +E L R I P + E Sbjct: 249 GSFTRLGGNQKIEVD---IRVISATNKNLEEEIKKGNFREDLYYRLSVFQIYLPPLRER 304 >4A2W-A nrPDB Length = 936 Score = 32.5 bits (72), Expect = 0.73, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 81/248 (32%), Gaps = 17/248 (6%) Query: 277 DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNI--FEKD 334 + LF+D + + G G ++ +L++G + + +FS + E Sbjct: 53 SGAAALFLDAVLQLEARGWFRG-------MLDAMLAAGYTGLAEAIENWDFSKLEKLELH 105 Query: 335 RALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAA-----VELAVKYI 389 R L +R + + + I L + E + + +AA +E + Sbjct: 106 RQLLKRIEATMLEVDPVALIPYISTCLIDR-ECEEIQQISENRSKAAGITKLIECLCRSD 164 Query: 390 NDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTL 449 + H P +D G R+ D E A + + + Sbjct: 165 KE-HWPKSLQLALDTTGYYRASELWDIREDNAKDVDSEMTDASEDCLEASMTYSEEAEPD 223 Query: 450 KNLGDRLKMLVFGQDKAIEAL-TEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL 508 NL + L G K T+ + + L + L PTG GKT V++ + Sbjct: 224 DNLSENLGSAAEGIGKPPPVYETKKARSYQIELAQPAINGKNALICAPTGSGKTFVSILI 283 Query: 509 SKALGIEL 516 + + Sbjct: 284 CEHHFQNM 291 >1B74-A nrPDB Length = 254 Score = 32.5 bits (72), Expect = 0.75, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 61/182 (33%), Gaps = 31/182 (17%) Query: 335 RALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHL 394 +A+ R++K+DI L + +R +R ++E A L Sbjct: 17 KAIRNRYRKVDIV------------YLGDTARVPYGIRSKDTIIRYSLECAG------FL 58 Query: 395 PDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGD 454 DK +D+I A A + + KK +NV P V + Sbjct: 59 KDKGVDIIVVACNTASAYALERLKKEINV-------------PVFGVIEPGVKEALKKSR 105 Query: 455 RLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI 514 K+ V G +++ K+ G K F G+ + E+T ++ + Sbjct: 106 NKKIGVIGTPATVKSGAYQRKLEEGGADVFAKACPLFAPLAEEGLLEGEITRKVVEHYLK 165 Query: 515 EL 516 E Sbjct: 166 EF 167 >3OZX-A nrPDB Length = 538 Score = 32.5 bits (72), Expect = 0.76, Method: Composition-based stats. Identities = 63/327 (19%), Positives = 113/327 (34%), Gaps = 44/327 (13%) Query: 206 RKNNPLL--VGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDF 263 KNN +L +G++GVGKT + + LA I+ +G ++RG Sbjct: 22 PKNNTILGVLGKNGVGKTTVLKILAGEIIPNFGDPNSK--------VGKDEVLKRFRG-- 71 Query: 264 EKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTT 323 K K+L + I+ H I A+ +K ++ ++ Sbjct: 72 -KEIYNYFKELYSNELKIV-----HKIQYVEY-------ASKFLKGTVNEILTKIDERGK 118 Query: 324 YQEFS------NIFEKDRALAR--RFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTA 375 E N++ KD + Q++ + + E I Y + A Sbjct: 119 KDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLREADVYIFDQPSSYLDVRERMNMA 178 Query: 376 KAVRAAVELAVKYINDRHLP--DKAIDVID----EAGARARLMPVSKRKKTVNVADIESV 429 KA+R ++ + D L D D+I E+ R+ + +N + Sbjct: 179 KAIRELLKNKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAARVGINNFLKGYL 238 Query: 430 VARIARI-PEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPV 488 A +I P++ + +L LK K I+ L + + G E + + Sbjct: 239 PAENMKIRPDEIKFMLKEVSDLDLSKDLKTK-MKWTKIIKKLGDFQLVVDNGEAKEGEII 297 Query: 489 GSFLFAGPTGVGKTEVTVQLSKALGIE 515 G GP G+GKT L + + Sbjct: 298 G---ILGPNGIGKTTFARILVGEITAD 321 >6QEL-G nrPDB Length = 245 Score = 32.5 bits (72), Expect = 0.78, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 18/41 (43%) Query: 472 EAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKAL 512 A+ AR + + SF+F+G G GK + + L Sbjct: 83 NALSKARQYVEEFDGNIASFIFSGKPGTGKNHLAAAICNEL 123 >2QBY-B nrPDB Length = 384 Score = 32.5 bits (72), Expect = 0.80, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 65/187 (34%), Gaps = 37/187 (19%) Query: 490 SFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYME---RHTVSRLIGAPPGYVGFDQG 546 S LF G TG GKT V+ + IE ++ + EY + + R +G P V Sbjct: 47 SNLFLGLTGTGKTFVSKYI--FNEIEEVKKEDEEYKDVKQAYVNCREVGGTPQAVLSSLA 104 Query: 547 GLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF---------R 597 G LT + H + L + I+K NI + + T R D Sbjct: 105 GKLTGFSVPK-HGINLGEYIDKIKNGTRNIRAIIYLDEVDTLVKRRGGDIVLYQLLRSDA 163 Query: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDV 657 N+ ++M +N D + ++ P + L + F + Sbjct: 164 NISVIMISN----------------DIN------VRDYMEPRVLSSLGPSVIFKPYDAEQ 201 Query: 658 IHQVVDK 664 + ++ K Sbjct: 202 LKFILSK 208 >1YE8-A nrPDB Length = 178 Score = 32.1 bits (71), Expect = 0.86, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 41/109 (37%), Gaps = 28/109 (25%) Query: 210 PLLVGESGVGKTAIAEGLAWRIVQGDV---------PEVMA--DCTIYSLDIGSLLAGTK 258 ++ GE GVGKT + + + R+ + + PE I + + + +K Sbjct: 3 IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSK 62 Query: 259 YRGD-------------FEK----RFKALLKQLEQDTNSILFIDEIHTI 290 + FE+ + ++ ++D ++ IDEI + Sbjct: 63 FFTSKKLVGSYGVNVQYFEELAIPILERAYREAKKDRRKVIIIDEIGKM 111 Score = 30.2 bits (66), Expect = 3.9, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 19/42 (45%) Query: 491 FLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSR 532 + G GVGKT + ++ + LG + F E + T R Sbjct: 3 IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKR 44 >3FVQ-A nrPDB Length = 359 Score = 32.1 bits (71), Expect = 0.87, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 59/203 (29%), Gaps = 26/203 (12%) Query: 487 PVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQG 546 P G +G GKT + L+ + +S + S+ P Sbjct: 29 PGEILFIIGASGCGKTTLLRCLAGFEQPDSGEISLSG---KTIFSKNTNLP--------- 76 Query: 547 GLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTN 606 V + L+ + + H V+ + + NG GR A R + M Sbjct: 77 ------VRERRLGYLVQEGVLFPHLTVYRNIAYGLGNG-----KGRTAQERQRIEAMLEL 125 Query: 607 AGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFI 666 G+ E + + A PE LD F L + Q+ + I Sbjct: 126 TGISELAGRYPHELSGGQQQRAALARALAPDPELI-LLDE--PFSALDEQLRRQIREDMI 182 Query: 667 VELQVQLDQKGVSLEVSQEARNW 689 L+ +EA + Sbjct: 183 AALRANGKSAVFVSHDREEALQY 205 Score = 29.4 bits (64), Expect = 6.1, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 17/36 (47%) Query: 212 LVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYS 247 ++G SG GKT + LA ++ TI+S Sbjct: 35 IIGASGCGKTTLLRCLAGFEQPDSGEISLSGKTIFS 70 >6MJP-A nrPDB Length = 241 Score = 32.1 bits (71), Expect = 0.89, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 66/188 (35%), Gaps = 27/188 (14%) Query: 212 LVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGS-LLAGTKYRGDFEKRFKAL 270 L+G +G GKT + + + + + D I L + S G Y F+ L Sbjct: 34 LLGPNGAGKTTSFYMIVGLVARDEGTITIDDNDISILPMHSRSRMGIGYLPQEASIFRKL 93 Query: 271 LKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVI----GSTTYQE 326 + D I ++ + + + ++ LL I+ I G Sbjct: 94 SVE-----------DNIMAVLQTREELTHE-ERQDKLEDLLEEFHIQHIRKSAGMALSGG 141 Query: 327 FSNIFEKDRALARRFQKIDITEP-------SIEETVQIINGLKPKYEAHHDVRYTAKAVR 379 E RALA Q I + +P S+ + +II L+ + V T VR Sbjct: 142 ERRRVEIARALAANPQFILLDQPFAGVDPISVIDIKKIIEHLRDR---GLGVLITDHNVR 198 Query: 380 AAVELAVK 387 +++ K Sbjct: 199 ETLDVCEK 206 >1J8M-F nrPDB Length = 297 Score = 32.1 bits (71), Expect = 0.92, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 4/64 (6%) Query: 183 GGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD 242 + L G +KE + + +LVG G GKT A LA+ + + Sbjct: 78 DELSNLFGGDKEPKVIPDKIPYV----IMLVGVQGTGKTTTAGKLAYFYKKKGFKVGLVG 133 Query: 243 CTIY 246 +Y Sbjct: 134 ADVY 137 >2ZXU-A nrPDB Length = 316 Score = 32.1 bits (71), Expect = 0.93, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 18/31 (58%) Query: 490 SFLFAGPTGVGKTEVTVQLSKALGIELLRFD 520 + GPT GKT + ++L K L +EL+ D Sbjct: 12 AIFLMGPTASGKTALAIELRKILPVELISVD 42 >4A2Q-A nrPDB Length = 797 Score = 32.1 bits (71), Expect = 0.97, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 81/248 (32%), Gaps = 17/248 (6%) Query: 277 DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNI--FEKD 334 + LF+D + + G G ++ +L++G + + +FS + E Sbjct: 53 SGAAALFLDAVLQLEARGWFRG-------MLDAMLAAGYTGLAEAIENWDFSKLEKLELH 105 Query: 335 RALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAA-----VELAVKYI 389 R L +R + + + I L + E + + +AA +E + Sbjct: 106 RQLLKRIEATMLEVDPVALIPYISTCLIDR-ECEEIQQISENRSKAAGITKLIECLCRSD 164 Query: 390 NDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTL 449 + H P +D G R+ D E A + + + Sbjct: 165 KE-HWPKSLQLALDTTGYYRASELWDIREDNAKDVDSEMTDASEDCLEASMTYSEEAEPD 223 Query: 450 KNLGDRLKMLVFGQDKAIEAL-TEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL 508 NL + L G K T+ + + L + L PTG GKT V++ + Sbjct: 224 DNLSENLGSAAEGIGKPPPVYETKKARSYQIELAQPAINGKNALICAPTGSGKTFVSILI 283 Query: 509 SKALGIEL 516 + + Sbjct: 284 CEHHFQNM 291 >2SHK-A nrPDB Length = 173 Score = 31.7 bits (70), Expect = 1.1, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 20/52 (38%) Query: 210 PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRG 261 +VG G GKT + LA + V + + + ++A + G Sbjct: 5 IFMVGARGCGKTTVGRELARALGYEFVDTDIFMQHTSGMTVADVVAAEGWPG 56 >1Y63-A nrPDB Length = 184 Score = 31.7 bits (70), Expect = 1.2, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 11/79 (13%) Query: 209 NPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFK 268 N L+ G G GKT++AE +A + L++G L+ + +++ Sbjct: 12 NILITGTPGTGKTSMAEMIAAELDG-----------FQHLEVGKLVKENHFYTEYDTELD 60 Query: 269 ALLKQLEQDTNSILFIDEI 287 + + + + + F++ I Sbjct: 61 THIIEEKDEDRLLDFMEPI 79 >5ZFQ-A nrPDB Length = 390 Score = 31.3 bits (69), Expect = 1.4, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 2/92 (2%) Query: 198 AIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI--VQGDVPEVMADCTIYSLDIGSLLA 255 ++ L + + L+ G +G GK+ + +I + D + D Y S + Sbjct: 140 VVKELAEKPRGLILVTGPTGSGKSTTLAAIIDKINTERHDHIVTIEDPIEYLHPHKSCVV 199 Query: 256 GTKYRGDFEKRFKALLKQLEQDTNSILFIDEI 287 + G K FK LK + + ++ + E+ Sbjct: 200 NQREVGADTKSFKNALKYILRQDPDVVLVGEL 231 >5I8Q-A nrPDB Length = 767 Score = 31.3 bits (69), Expect = 1.4, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 18/88 (20%) Query: 153 PGSQPNSEEQAGGEERMEN--FTTNLNQLARVGGIDPLIGREK--------ELERAIQVL 202 P +P AG + ++ + Q G I+P GRE ++ R + V Sbjct: 37 PSEEPLVHHDAGEFKGLQRHHTSAEEAQKLEDGKINPFTGREFTPKYVDILKIRRELPVH 96 Query: 203 CRR------RKNNPLLV--GESGVGKTA 222 +R +NN ++V GE+G GKT Sbjct: 97 AQRDEFLKLYQNNQIMVFVGETGSGKTT 124 >6C2V-A nrPDB Length = 115 Score = 31.3 bits (69), Expect = 1.5, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Query: 164 GGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAI 223 G+ ++ + I + +E + +R + RR + ++VG SG GK+ + Sbjct: 13 AGKTTLDELARKAKEEVPDAEIRTVTTKE-DAKRVAEEAERRNADIVVIVGPSGSGKSTL 71 Query: 224 AEGLAWRIVQG 234 A+ + I + Sbjct: 72 AKIVKKIIARA 82 Score = 29.8 bits (65), Expect = 4.9, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 2/74 (2%) Query: 442 SQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGK 501 S + + TL L + K V D I +T R E + + GP+G GK Sbjct: 11 SGAGKTTLDELARKAKEEV--PDAEIRTVTTKEDAKRVAEEAERRNADIVVIVGPSGSGK 68 Query: 502 TEVTVQLSKALGIE 515 + + + K + Sbjct: 69 STLAKIVKKIIARA 82 Score = 29.4 bits (64), Expect = 5.8, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 27/124 (21%) Query: 210 PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKA 269 ++VG SG GKT + E LA + + +VP+ D K Sbjct: 5 VVIVGPSGAGKTTLDE-LARK-AKEEVPDAEIRTVTTKEDA-----------------KR 45 Query: 270 LLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSN 329 + ++ E+ I+ I G + G+ A ++K +++ + I TT +E Sbjct: 46 VAEEAERRNADIVVI--------VGPSGSGKSTLAKIVKKIIARAGAKTIEVTTEEELRK 97 Query: 330 IFEK 333 K Sbjct: 98 AVAK 101 >2I3B-A nrPDB Length = 189 Score = 31.3 bits (69), Expect = 1.5, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 12/28 (42%) Query: 210 PLLVGESGVGKTAIAEGLAWRIVQGDVP 237 L G GVGKT + + + VP Sbjct: 4 VFLTGPPGVGKTTLIHKASEVLKSSGVP 31 >4R7Y-A nrPDB Length = 613 Score = 31.3 bits (69), Expect = 1.6, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 88/294 (29%), Gaps = 34/294 (11%) Query: 205 RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFE 264 R + LLVG+ GV K+ I +A + + + L R +F Sbjct: 333 RGDIHVLLVGDPGVAKSQILRYVANLAPRAIYTSGKS-------SSAAGLTAAAVRDEFT 385 Query: 265 KRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLS------SGKIRV 318 + L IDE+ + + + I + + + V Sbjct: 386 GGWVLEAGALVLADGGYALIDELDKMSDRDRSVIHEALEQQTISISKAGITATLNARTTV 445 Query: 319 IGSTTYQEFS--------NIFEKDRALARRFQKIDI--TEPSIEETVQIINGLKPKYEAH 368 I + ++ + L RF I + EP + ++ + Sbjct: 446 IAAANPKQGRFNRMKNPFEQIDLPPTLLSRFDLIFVLIDEPDDKIDSEVARHILRVRRGE 505 Query: 369 HDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIES 428 +V A + E+ KYI + + +EA V + +K+V E Sbjct: 506 SEV----VAPKIPHEILRKYIAYARKNIHPV-ISEEAMEEIEKYYV-RMRKSVKKTKGEE 559 Query: 429 VVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLG 482 IP ++ + L L + + E EAIK+ L Sbjct: 560 E-----GIPPIPITARQLEALIRLSEAHARMRLSPIVTREDAREAIKLMEYTLK 608 >3A4L-A nrPDB Length = 260 Score = 31.3 bits (69), Expect = 1.7, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 51/145 (35%), Gaps = 19/145 (13%) Query: 210 PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKA 269 +L G GVGK+ ++ LA + + ++ ++ + ++ +E+ K Sbjct: 7 IILTGLPGVGKSTFSKNLAKILSKNNIDVIVLGSDLIRESFPV------WKEKYEEFIKK 60 Query: 270 LLKQLEQD--TNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEF 327 +L N + +D+ + D N+ K + I + ++ Sbjct: 61 STYRLIDSALKNYWVIVDDTNYYNSMRR------DLINIAKKYNKNYAIIYLKASLDVLI 114 Query: 328 SNIFEK-----DRALARRFQKIDIT 347 E+ + + + ++K D Sbjct: 115 RRNIERGEKIPNEVIKKMYEKFDEP 139 >4CVN-A nrPDB Length = 191 Score = 30.9 bits (68), Expect = 1.9, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 55/158 (34%), Gaps = 29/158 (18%) Query: 495 GPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVI 554 G GVGKT + L++ LG E + + ++ R + V D+ + + Sbjct: 18 GTPGVGKTTIAKLLAEKLGYEYVN--LRDFALEKGCGREVDGEV-EVEIDELAYFVEKEL 74 Query: 555 KHPHAV----------LLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADF-------- 596 K + V + L + +AHP + L+ + G + G + Sbjct: 75 KDRNVVLDGHLSHLMPVDLVVVLRAHPRIIGERLR--ERGYSKEKIGENVEAELVDAILI 132 Query: 597 ------RNVVLVMTTNAGVRETERKSIGLIHQDNSTDA 628 NV+ V TTN E + IGLI Sbjct: 133 EAIDEHENVIEVDTTNKTPEEIVEEIIGLIKSGVKRRV 170 >1YB4-A nrPDB Length = 295 Score = 30.9 bits (68), Expect = 1.9, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 59/147 (40%), Gaps = 7/147 (4%) Query: 106 ANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGG 165 A+++ + + L +H ++ + P ++ + N G Sbjct: 59 ADIIFIMVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVN----EMG 114 Query: 166 EERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAE 225 + ++ + AR G + ++G E+++ ++ L N LVG +G G+T Sbjct: 115 ADYLDAPVSGGEIGAREGTLSIMVGGEQKVFDRVKPLFDILGKNITLVGGNGDGQTC--- 171 Query: 226 GLAWRIVQGDVPEVMADCTIYSLDIGS 252 +A +I+ E +++ +++ G+ Sbjct: 172 KVANQIIVALNIEAVSEALVFASKAGA 198 >3B85-A nrPDB Length = 208 Score = 30.9 bits (68), Expect = 2.1, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 17/118 (14%) Query: 494 AGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAV 553 GP G GKT + + + + ++ VSR+I P ++ G L + Sbjct: 28 LGPAGSGKTYLAMAKA------------VQALQSKQVSRIILTRPAVEAGEKLGFLPGTL 75 Query: 554 IKH--PHAVLLLDEIEKA-HPDVFNILLQ--VMDNGTLTDNNGRKADFRNVVLVMTTN 606 + P+ L D + P+V L++ +++ L GR + V+L N Sbjct: 76 NEKIDPYLRPLHDALRDMVEPEVIPKLMEAGIVEVAPLAYMRGRTLNDAFVILDEAQN 133 >5NSS-F nrPDB Length = 295 Score = 30.9 bits (68), Expect = 2.3, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 2/106 (1%) Query: 186 DPLIGREKELERAIQVLCRRR--KNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC 243 D L+G ++ + L++GE G GK IA L + + P + +C Sbjct: 26 DNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNC 85 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHT 289 + ++ G F K + E+ LF+DE+ T Sbjct: 86 AALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGGTLFLDELAT 131 >6BKF-A nrPDB Length = 621 Score = 30.9 bits (68), Expect = 2.3, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 30/76 (39%), Gaps = 6/76 (7%) Query: 656 DVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYD--RAMGARP----MARVIQ 709 + I + + ++ +LD + + + + + + GY+ GA P + I Sbjct: 258 EHIEKDMKHQSFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTDQFGASPTEGSLTPFIH 317 Query: 710 DNLKKPLANELLFGSL 725 + K + +L G + Sbjct: 318 NAFKADIQICILDGEM 333 >2C98-A nrPDB Length = 265 Score = 30.9 bits (68), Expect = 2.3, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 2/106 (1%) Query: 186 DPLIGREKELERAIQVLCRRR--KNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADC 243 D L+G ++ + L++GE G GK IA L + + P + +C Sbjct: 6 DNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNC 65 Query: 244 TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHT 289 + ++ G F K + E+ LF+DE+ T Sbjct: 66 AALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGGTLFLDELAT 111 >4OV4-A nrPDB Length = 414 Score = 30.9 bits (68), Expect = 2.4, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 7/78 (8%) Query: 604 TTNAGVRETERKSIGLIHQDNSTDAMEEIK---KIFTPEFRNRLDNIIWFDHLSTDVIHQ 660 T G +S IHQD T + + K + F+PEF R+D + H+ Sbjct: 306 TPIIGEDIFSHRSG--IHQDGVTKTLHQSKGAYRTFSPEFVGRMDKETI--SFTNQSGHK 361 Query: 661 VVDKFIVELQVQLDQKGV 678 ++ + + +Q+ ++G+ Sbjct: 362 AIEFLLHQRGIQVSKEGI 379 >5TSG-B nrPDB Length = 588 Score = 30.6 bits (67), Expect = 2.7, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 56/162 (34%), Gaps = 14/162 (8%) Query: 363 PKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVN 422 YE VRY V E+ + ++ I ++ E R +P R K + Sbjct: 225 EPYERSFRVRYRIDGVL--YEVMKPPLKLKNAITSRIKIMAELDIAERRLPQDGRIK-IK 281 Query: 423 VADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFG-QDKAIEALTEAIKMARAGL 481 + + + R++ +P + L +L M G + A+ EAI Sbjct: 282 LGGGQDMDYRVSVLPTLFGEKVVLRLLDKSNLQLDMTKLGYEPDALHYFKEAI------- 334 Query: 482 GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSE 523 HKP G L GPTG GKT L +E Sbjct: 335 ---HKPFGMVLVTGPTGSGKTVSLYSALGELNKTTENISTAE 373 >1D9Z-A nrPDB Length = 657 Score = 30.6 bits (67), Expect = 3.0, Method: Composition-based stats. Identities = 50/287 (17%), Positives = 98/287 (34%), Gaps = 33/287 (11%) Query: 463 QDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMS 522 Q +A+ + + R G+ H+ G TG GKT + + L + Sbjct: 14 QGDQPQAIAKLVDGLRRGVKHQT-------LLGATGTGKTFTISNVIAQVNKPTLVIAHN 66 Query: 523 EYMERHTVSRLIGAPPG-----YVGFDQGGLLTDAVIKHPHAVL-----LLDEIEKAHPD 572 + + S L P +V + +A + + + DEI+K Sbjct: 67 KTLAGQLYSELKEFFPHNAVEYFVSYYDYYQ-PEAYVPQTDTYIEKDAKINDEIDKLRHS 125 Query: 573 VFNILLQVMD-----NGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTD 627 + L + D + + G ++R +V+ + + + Q + D Sbjct: 126 ATSALFERRDVIIVASVSCIYGLGSPEEYRELVVSLRVGMEIERNALLRRLVDIQYDRND 185 Query: 628 AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEAR 687 F FR R D + F S D V+ F E++ + ++ +V E Sbjct: 186 I------DFRGTFRVRGDVVEIF-PASRDEHCIRVEFFGDEIERIREVDALTGKVLGERE 238 Query: 688 N---WLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQV 731 + + A R R + I+ L++ LA G L++ ++ Sbjct: 239 HVAIFPASHFVTREEKMRLAIQNIEQELEERLAELRAQGKLLEAQRL 285 >3EPJ-A nrPDB Length = 409 Score = 30.2 bits (66), Expect = 3.2, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 10/89 (11%) Query: 491 FLFAGPTGVGKTEVTVQLSKALGIELLRFD-MSEYME------RHTVSRLIGAPPGYVGF 543 + AG TGVGK+++++QL++ E++ D M Y + +H + G P + Sbjct: 5 IVIAGTTGVGKSQLSIQLAQKFNGEVINSDSMQVYKDIPIITNKHPLQEREGIPHHVMNH 64 Query: 544 DQGGLLTDAVIKHPHAVLLLDEIEKAHPD 572 ++ H ++ IE H Sbjct: 65 VD---WSEEYYSHRFETECMNAIEDIHRR 90 >3SR0-A nrPDB Length = 206 Score = 30.2 bits (66), Expect = 3.8, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 11/86 (12%) Query: 491 FLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLT 550 +F GP G GK +L+K G + + + R V + G P G + Sbjct: 3 LVFLGPPGAGKGTQAKRLAKEKG--FVHISTGDIL-REAVQK--GTPLG----KKAKEYM 53 Query: 551 DAVIKHPHAVL--LLDEIEKAHPDVF 574 + P ++ L++E+ H +V Sbjct: 54 ERGELVPDDLIIALIEEVFPKHGNVI 79 >2D62-A nrPDB Length = 375 Score = 29.8 bits (65), Expect = 4.3, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 45/146 (30%), Gaps = 19/146 (13%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKAL 270 +L+G SG GKT +A + D + + G + E+ + Sbjct: 36 VLLGPSGCGKTTTLRMIAGLEEPTRGQIYIEDNLVADPEKGVFVPPK------ERDVAMV 89 Query: 271 LKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANL-------IKPLLSSGKIRVIGSTT 323 + + ++ D I + ++D + LL+ + G Sbjct: 90 FQSYALYPHMTVY-DNIAFPLKLRKVPKQEIDKRVREVAEMLGLTELLNRKPRELSGGQ- 147 Query: 324 YQEFSNIFEKDRALARRFQKIDITEP 349 RA+ RR + + EP Sbjct: 148 ----RQRVALGRAIIRRPKVFLMDEP 169 >2IYT-A nrPDB Length = 184 Score = 29.8 bits (65), Expect = 4.4, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 59/180 (32%), Gaps = 41/180 (22%) Query: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTK---YRGDFEKRF 267 +LVG G GK+ I LA + G + +A I + A +R E Sbjct: 6 VLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEEDVV 65 Query: 268 KALLKQ------------------LEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKP 309 +A L ++++++ EI G G N ++P Sbjct: 66 RAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYL-EISAAEGVRRTGG------NTVRP 118 Query: 310 LLS----SGKIRVIGSTTYQEFSNIFEKDRALARR---------FQKIDITEPSIEETVQ 356 LL+ + K R + + + + RR ++ + PS T++ Sbjct: 119 LLAGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVPSPSEAATLE 178 >5UCD-A nrPDB Length = 457 Score = 29.8 bits (65), Expect = 4.7, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 59/177 (33%), Gaps = 18/177 (10%) Query: 327 FSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAV 386 + + KD L R +++ P I T +++ + + V + + Sbjct: 277 YVHYSVKDALLERLVERVKTELPEINSTGKLV----TERQVQRLVSLLEATQGQVLVGSQ 332 Query: 387 KYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDR 446 ++ R L + V+D LM + V + +SV I + + Sbjct: 333 ADVSKRAL---SATVVDGVEWNDPLMSEELFGPILPVLEFDSVR---TAIDQVNKHHPKP 386 Query: 447 DTLKNLGDRLK--MLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGK 501 + G + + Q ++ +A + + + P G G +G+G+ Sbjct: 387 LAVYVFGKDMDVAKGIINQIQSGDAQVNGVMLHAF---SPYLPFGGI---GASGMGE 437 >3TR0-A nrPDB Length = 205 Score = 29.8 bits (65), Expect = 5.2, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 18/37 (48%) Query: 491 FLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMER 527 F+ + P+G GKT + L KAL + + +R Sbjct: 10 FIISAPSGAGKTSLVRALVKALAEIKISISHTTRPKR 46 >3D31-A nrPDB Length = 348 Score = 29.4 bits (64), Expect = 6.0, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 13/29 (44%) Query: 491 FLFAGPTGVGKTEVTVQLSKALGIELLRF 519 F+ GPTG GKT ++ + R Sbjct: 29 FVILGPTGAGKTLFLELIAGFHVPDSGRI 57 >1E3H-A nrPDB Length = 757 Score = 29.4 bits (64), Expect = 6.0, Method: Composition-based stats. Identities = 32/136 (23%), Positives = 50/136 (36%), Gaps = 15/136 (11%) Query: 248 LDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSIL---FIDEIHTIIGAGAAS----GGQ 300 LD LA K +FE R K + T S++ I E I G G + Sbjct: 312 LDRVKALAAEKLLPEFEGREKEISAAYRALTKSLVRERVIAEKKRIDGRGVTDIRTLAAE 371 Query: 301 VDAANLI--KPLLSSGKIRVIGSTTYQEFSNIFEKD---RALARRFQKIDITEP-SIEET 354 V+A + L G+ +++G TT + D +R+ P S+ ET Sbjct: 372 VEAIPRVHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGET 431 Query: 355 VQIINGLKPKYEAHHD 370 ++ G + E H Sbjct: 432 GRV--GSPKRREIGHG 445 >1YPX-A nrPDB Length = 375 Score = 29.4 bits (64), Expect = 6.3, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 24/57 (42%) Query: 672 QLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDG 728 QLD S S E R + ++G+D +I + +K A+ ++ + G Sbjct: 185 QLDDTSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKPADMVITMHICRG 241 >3E70-C nrPDB Length = 328 Score = 29.0 bits (63), Expect = 8.2, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 68/187 (36%), Gaps = 33/187 (17%) Query: 406 GARARLMPVSKRKKTVNVA----DIESVVARIARIPEKSVSQSDRDTL--KNLGDRLKML 459 G R++ V ++K V+ A +I+ + A +A ++ + + L K + Sbjct: 37 GLLDRILTVEIKEKDVDKALDELEIDLLEADVALEVVDALREKIKQKLVGKKVRIGTDKG 96 Query: 460 VFGQDKAIEALTEAIKMAR-----AGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGI 514 ++ EA++E ++ +R + KP +F G G GKT +L+ L Sbjct: 97 KIIEEAVKEAVSEILETSRRIDLIEEIRKAEKPY-VIMFVGFNGSGKTTTIAKLANWLKN 155 Query: 515 ----------ELLRFDMSEYMERHT-------VSRLIGAPPGYVGFDQGGLLTDAVIKHP 557 + R E +E H + GA P V +D Sbjct: 156 HGFSVVIAASDTFRAGAIEQLEEHAKRIGVKVIKHSYGADPAAVAYDA----IQHAKARG 211 Query: 558 HAVLLLD 564 V+L+D Sbjct: 212 IDVVLID 218 >1U35-C nrPDB Length = 120 Score = 29.0 bits (63), Expect = 8.4, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 24/45 (53%) Query: 10 LNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVAL 54 L +A AR+++ +T H+LLA+ ++ + L+ ++ + Sbjct: 61 LELAVNAARDNKKGRVTPRHILLAVANDEELNQLLKGVTIASGGV 105 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.307 0.122 0.285 Lambda K H 0.267 0.0377 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,739,730 Number of Sequences: 36641 Number of extensions: 828566 Number of successful extensions: 4707 Number of sequences better than 10.0: 212 Number of HSP's better than 10.0 without gapping: 202 Number of HSP's successfully gapped in prelim test: 150 Number of HSP's that attempted gapping in prelim test: 3799 Number of HSP's gapped (non-prelim): 699 length of query: 758 length of database: 10,336,785 effective HSP length: 105 effective length of query: 653 effective length of database: 6,489,480 effective search space: 4237630440 effective search space used: 4237630440 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 63 (29.0 bits)