BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P0AA43 (231 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1KSL-A nrPDB 478 e-136 1VIO-A nrPDB 279 6e-76 4LAB-A nrPDB 94 4e-20 3DH3-A nrPDB 87 8e-18 2GML-A nrPDB 82 2e-16 2OML-A nrPDB 77 9e-15 2OLW-A nrPDB 76 9e-15 5UBA-A nrPDB 33 0.15 2IW3-A nrPDB 30 1.0 2IST-A nrPDB 30 1.0 3KHI-A nrPDB 29 1.4 5HUQ-A nrPDB 29 1.9 3V7O-A nrPDB 29 2.2 3GUW-A nrPDB 28 3.7 4GIV-A nrPDB 27 4.9 1MAF-H nrPDB 27 5.0 4OOQ-A nrPDB 27 8.3 >1KSL-A nrPDB Length = 234 Score = 478 bits (1231), Expect = e-136, Method: Compositional matrix adjust. Identities = 231/231 (100%), Positives = 231/231 (100%) Query: 1 MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGP 60 MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGP Sbjct: 4 MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGP 63 Query: 61 RYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHR 120 RYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHR Sbjct: 64 RYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHR 123 Query: 121 ITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISE 180 ITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISE Sbjct: 124 ITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISE 183 Query: 181 GRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASVV 231 GRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASVV Sbjct: 184 GRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASVV 234 >1VIO-A nrPDB Length = 243 Score = 279 bits (714), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 132/231 (57%), Positives = 172/231 (74%) Query: 1 MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGP 60 +RLDKFIA+ +G++R+ A + IR + V ++GEIV++ + ++ E ++ ++ L Sbjct: 3 LRLDKFIAENVGLTRSQATKAIRQSAVKINGEIVKSGSVQISQEDEIYFEDELLTWIEEG 62 Query: 61 RYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHR 120 +YFMLNKPQG VCS DD D+PT+ F D P+A KLH+AGRLD+DTTGLVL+TDDGQWSHR Sbjct: 63 QYFMLNKPQGCVCSNDDGDYPTIYQFFDYPLAGKLHSAGRLDVDTTGLVLLTDDGQWSHR 122 Query: 121 ITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISE 180 ITSP+HHCEKTYLVTL PV ++ + A+G+ L EK+ TKPA LE++ V LTISE Sbjct: 123 ITSPKHHCEKTYLVTLADPVEENYSAACAEGILLRGEKEPTKPAKLEILDDYNVNLTISE 182 Query: 181 GRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASVV 231 GRYHQVKRMFAA+GN VV LHR +IG + LD L GEYRPLT+ EI +V Sbjct: 183 GRYHQVKRMFAALGNKVVGLHRWKIGDVVLDESLEEGEYRPLTQSEIEKLV 233 >4LAB-A nrPDB Length = 255 Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 18/234 (7%) Query: 2 RLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVR-NAAFKLLPEHDVAYDGNPLAQQHGP 60 +L K +A+ SR I RV+VDG+I + ++ P + DG+ ++ + Sbjct: 8 KLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEVTPGLKIRIDGHLISVRESA 67 Query: 61 ----RYFMLNKPQGYVCSTDDPD-HPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDG 115 R KP+G +C+ +DP+ PTV L + + A GRLD++T GL+L T DG Sbjct: 68 EQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFTTDG 127 Query: 116 QWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPT--- 172 + ++R+ P E+ Y V + V D ++GVQL + PA + I + Sbjct: 128 ELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLED-----GPAAFKTIKFSGGE 182 Query: 173 ----QVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPL 222 +T++EGR +V+R++ AVG V L R R G I L L G + L Sbjct: 183 GINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTEL 236 >3DH3-A nrPDB Length = 290 Score = 86.7 bits (213), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 63/229 (27%), Positives = 114/229 (49%), Gaps = 8/229 (3%) Query: 1 MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGP 60 +RL+K+I++ SR A R I V ++G+ ++ P V +G + + Sbjct: 7 VRLNKYISESGICSRREADRYIEQGNVFLNGKRA-TIGDQVKPGDVVKVNGQLIEPREAE 65 Query: 61 RYFM--LNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWS 118 + LNKP G V +T+D + ++ F++ + ++ GRLD D+ GL+ +T+ G Sbjct: 66 DLVLIALNKPVGIVSTTEDGERDNIVDFVNH--SKRVFPIGRLDKDSQGLIFLTNHGDLV 123 Query: 119 HRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTI 178 ++I + EK YLVT++ P+ ++ + GV + E P R+T+ Sbjct: 124 NKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKE--APFVFRITL 181 Query: 179 SEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEI 227 +G Q++RM G V +L R RI ++L + GE+R LT++E+ Sbjct: 182 VQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSG-IPLGEWRDLTDDEL 229 >2GML-A nrPDB Length = 237 Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 49/163 (30%), Positives = 86/163 (52%), Gaps = 5/163 (3%) Query: 65 LNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHRITSP 124 LNKP G V +T+D + ++ F++ + ++ GRLD D+ GL+ +T+ G ++I Sbjct: 19 LNKPVGIVSTTEDGERDNIVDFVNH--SKRVFPIGRLDKDSQGLIFLTNHGDLVNKILRA 76 Query: 125 RHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISEGRYH 184 + EK YLVT++ P+ ++ + GV + E P R+T+ +G Sbjct: 77 GNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKE--APFVFRITLVQGLNR 134 Query: 185 QVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEI 227 Q++RM G V +L R RI ++L + GE+R LT++E+ Sbjct: 135 QIRRMCEHFGYEVKKLERTRIMNVSLSG-IPLGEWRDLTDDEL 176 >2OML-A nrPDB Length = 189 Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 22/182 (12%) Query: 61 RYFMLNKPQGYVCS-TDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSH 119 R + NKP + TD+ T+ F+ PV ++AAGRLD D+ GL+++T++G Sbjct: 12 RVILFNKPYDVLPQFTDEAGRKTLKEFI--PVQ-GVYAAGRLDRDSEGLLVLTNNGALQA 68 Query: 120 RITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLT-------KPAVL------ 166 R+T P K Y V +E D E GV L++ L +PA L Sbjct: 69 RLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPP 128 Query: 167 ----EVITPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPL 222 + I + +++T+ EGR QV+RM A VG + L R +G +LD +LA GE+R + Sbjct: 129 IRERKSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLD-NLANGEWREV 187 Query: 223 TE 224 T+ Sbjct: 188 TD 189 >2OLW-A nrPDB Length = 217 Score = 76.3 bits (186), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 22/182 (12%) Query: 61 RYFMLNKPQGYVCS-TDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSH 119 R + NKP + TD+ T+ F+ PV ++AAGRLD D+ GL+++T++G Sbjct: 40 RVILFNKPYDVLPQFTDEAGRKTLKEFI--PVQ-GVYAAGRLDRDSEGLLVLTNNGALQA 96 Query: 120 RITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLT-------KPAVL------ 166 R+T P K Y V +E D E GV L++ L +PA L Sbjct: 97 RLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPP 156 Query: 167 ----EVITPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPL 222 + I + +++T+ EGR QV+RM A VG + L R +G +LD +LA GE+R + Sbjct: 157 IRERKSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLD-NLANGEWREV 215 Query: 223 TE 224 T+ Sbjct: 216 TD 217 >5UBA-A nrPDB Length = 295 Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust. Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 27/141 (19%) Query: 46 DVAYDGNPLAQ-------QHGPRYFMLNKPQGY---------VCSTDDPDHPTVLYFLDE 89 ++ + GN LA+ ++NKP G +C TD P + L Sbjct: 13 NLYFQGNVLAKALTRGILHQDKNLVVINKPYGLPVHGGPGVQLCITDVL--PILAKMLHG 70 Query: 90 PVAWKLHAAGRLDIDTTGLVLMTDDGQWSHRITS---PRHHCEKTYLVTLESPVAD---- 142 A LH RLD +TTG++++ D +H++ R +K + +T+ P+ Sbjct: 71 HKAEPLHLCHRLDKETTGVMVLAWDKDMAHQVQELFRTRQVVKKYWAITVHVPMPSAGVV 130 Query: 143 --DTAEQFAKGVQLHNEKDLT 161 E+ A+G Q H++ L+ Sbjct: 131 DIPIVEKEAQGQQQHHKMTLS 151 >2IW3-A nrPDB Length = 986 Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust. Identities = 12/31 (38%), Positives = 20/31 (64%) Query: 197 VVELHRERIGGITLDADLAPGEYRPLTEEEI 227 +VE H + + + + LA G++RPLT +EI Sbjct: 850 LVESHSKMVAEVDMKEALASGQFRPLTRKEI 880 >2IST-A nrPDB Length = 325 Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust. Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 28/195 (14%) Query: 24 GNRVTVDGEIVRNAAFKLLPEH---DVAYDGNPLAQQHGPRYFMLN----KPQGYVCSTD 76 G +V ++ EI A F+ P+ D+ Y+ + + PR +++ P G V + Sbjct: 61 GEQVAINAEIEEEARFE--PQDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNAL 118 Query: 77 DPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHRITSP--RHHCEKTYLV 134 +P + D P A +H RLD DTTGL+++ R+ R + Y Sbjct: 119 LHYYPPIA---DVPRAGIVH---RLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEA 172 Query: 135 ----------TLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVI-TPTQVRLTISEGRY 183 T++ P++ ++ V + +T ++E T++RL + GR Sbjct: 173 VAIGHMTAGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRT 232 Query: 184 HQVKRMFAAVGNHVV 198 HQ++ A + + +V Sbjct: 233 HQIRVHMAHITHPLV 247 >3KHI-A nrPDB Length = 267 Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 25/50 (50%) Query: 157 EKDLTKPAVLEVITPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIG 206 E+ L P + + + Q +LT R+ Q KR+ A G + LH+ RI Sbjct: 22 EQALAIPVLAHLSSTEQHKLTQMAARFLQQKRLVALQGLELTPLHQARIA 71 >5HUQ-A nrPDB Length = 433 Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 7/81 (8%) Query: 129 EKTYLVTLESPVADDTAEQFAKGVQLHN----EKDLTKPAVLEVITPTQVRLTISEGRYH 184 ++T +L++P+ D E+ A+G HN D T+P +ITP +R S Sbjct: 40 QETVEKSLDNPIGSDKLEELARG--KHNIVIISSDHTRPVPSHIITPILLRRLRSVAPDA 97 Query: 185 QVKRMFAAVGNHVVELHRERI 205 ++ R+ A G H H E + Sbjct: 98 RI-RILVATGFHRPSTHEELV 117 >3V7O-A nrPDB Length = 227 Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust. Identities = 12/25 (48%), Positives = 17/25 (68%) Query: 195 NHVVELHRERIGGITLDADLAPGEY 219 N ++E HRE+IGG+TL L E+ Sbjct: 84 NDIIEAHREQIGGLTLAVLLQIAEH 108 >3GUW-A nrPDB Length = 261 Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust. Identities = 11/24 (45%), Positives = 13/24 (54%) Query: 48 AYDGNPLAQQHGPRYFMLNKPQGY 71 A D + +HGP FMLN GY Sbjct: 187 AEDAARIVAEHGPERFMLNSDAGY 210 >4GIV-A nrPDB Length = 209 Score = 27.3 bits (59), Expect = 4.9, Method: Compositional matrix adjust. Identities = 13/30 (43%), Positives = 19/30 (63%) Query: 195 NHVVELHRERIGGITLDADLAPGEYRPLTE 224 N ++E HRE+IGG T+ + +Y LTE Sbjct: 84 NDIIEAHREQIGGSTVVTTESGLKYEDLTE 113 >1MAF-H nrPDB Length = 373 Score = 27.3 bits (59), Expect = 5.0, Method: Compositional matrix adjust. Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 6/40 (15%) Query: 84 LYFL-DEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHRIT 122 +Y L E AWKLHAA + TGLV GQ S +I+ Sbjct: 281 IYLLTSEQSAWKLHAAAKEVTSVTGLV-----GQTSSQIS 315 >4OOQ-A nrPDB Length = 166 Score = 26.9 bits (58), Expect = 8.3, Method: Compositional matrix adjust. Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 13/89 (14%) Query: 125 RHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISEGRYH 184 + EK + T SP + G L + D PA + + PT + + + EG Y Sbjct: 32 KKLSEKAVIPTRGSP--------LSAGYDLSSAVDSKVPARGKALIPTDLSIAVPEGTYA 83 Query: 185 QVKRMFAAVGNHVVELHRERIGGITLDAD 213 ++ H ++ +G +DAD Sbjct: 84 RIAPRSGLAWKHSID-----VGAGVIDAD 107 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1KSL-A nrPDB 335 9e-93 1VIO-A nrPDB 333 5e-92 3DH3-A nrPDB 282 9e-77 4LAB-A nrPDB 265 2e-71 2GML-A nrPDB 210 5e-55 2OLW-A nrPDB 191 2e-49 2OML-A nrPDB 190 4e-49 Sequences not found previously or not previously below threshold: 2IST-A nrPDB 57 1e-08 1PRZ-A nrPDB 43 1e-04 6CFJ-1d nrPDB 38 0.003 5UBA-A nrPDB 37 0.006 1V9K-A nrPDB 35 0.031 4V75-AD nrPDB 35 0.039 5MYJ-AD nrPDB 34 0.045 1JIJ-A nrPDB 34 0.046 3KBG-A nrPDB 34 0.062 1C06-A nrPDB 31 0.43 5ND8-d nrPDB 31 0.44 3TS1-A nrPDB 29 1.7 6HA8-d nrPDB 28 2.2 1JH3-A nrPDB 28 2.3 5MRF-DD nrPDB 28 2.5 2IW3-A nrPDB 28 2.6 4MQD-A nrPDB 28 3.2 3PB8-X nrPDB 27 4.9 1PXT-A nrPDB 27 5.0 6DU7-A nrPDB 27 5.1 4FE4-A nrPDB 27 5.5 5Z81-A nrPDB 27 8.2 3EPJ-A nrPDB 27 8.2 >1KSL-A nrPDB Length = 234 Score = 335 bits (859), Expect = 9e-93, Method: Composition-based stats. Identities = 231/231 (100%), Positives = 231/231 (100%) Query: 1 MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGP 60 MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGP Sbjct: 4 MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGP 63 Query: 61 RYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHR 120 RYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHR Sbjct: 64 RYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHR 123 Query: 121 ITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISE 180 ITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISE Sbjct: 124 ITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISE 183 Query: 181 GRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASVV 231 GRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASVV Sbjct: 184 GRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASVV 234 >1VIO-A nrPDB Length = 243 Score = 333 bits (853), Expect = 5e-92, Method: Composition-based stats. Identities = 132/231 (57%), Positives = 172/231 (74%) Query: 1 MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGP 60 +RLDKFIA+ +G++R+ A + IR + V ++GEIV++ + ++ E ++ ++ L Sbjct: 3 LRLDKFIAENVGLTRSQATKAIRQSAVKINGEIVKSGSVQISQEDEIYFEDELLTWIEEG 62 Query: 61 RYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHR 120 +YFMLNKPQG VCS DD D+PT+ F D P+A KLH+AGRLD+DTTGLVL+TDDGQWSHR Sbjct: 63 QYFMLNKPQGCVCSNDDGDYPTIYQFFDYPLAGKLHSAGRLDVDTTGLVLLTDDGQWSHR 122 Query: 121 ITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISE 180 ITSP+HHCEKTYLVTL PV ++ + A+G+ L EK+ TKPA LE++ V LTISE Sbjct: 123 ITSPKHHCEKTYLVTLADPVEENYSAACAEGILLRGEKEPTKPAKLEILDDYNVNLTISE 182 Query: 181 GRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASVV 231 GRYHQVKRMFAA+GN VV LHR +IG + LD L GEYRPLT+ EI +V Sbjct: 183 GRYHQVKRMFAALGNKVVGLHRWKIGDVVLDESLEEGEYRPLTQSEIEKLV 233 >3DH3-A nrPDB Length = 290 Score = 282 bits (721), Expect = 9e-77, Method: Composition-based stats. Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 8/232 (3%) Query: 1 MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGP 60 +RL+K+I++ SR A R I V ++G+ ++ P V +G + + Sbjct: 7 VRLNKYISESGICSRREADRYIEQGNVFLNGKRA-TIGDQVKPGDVVKVNGQLIEPREAE 65 Query: 61 RYFM--LNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWS 118 + LNKP G V +T+D + ++ F++ + ++ GRLD D+ GL+ +T+ G Sbjct: 66 DLVLIALNKPVGIVSTTEDGERDNIVDFVNH--SKRVFPIGRLDKDSQGLIFLTNHGDLV 123 Query: 119 HRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTI 178 ++I + EK YLVT++ P+ ++ + GV + E P R+T+ Sbjct: 124 NKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKE--APFVFRITL 181 Query: 179 SEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASV 230 +G Q++RM G V +L R RI ++L + GE+R LT++E+ + Sbjct: 182 VQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSG-IPLGEWRDLTDDELIDL 232 >4LAB-A nrPDB Length = 255 Score = 265 bits (676), Expect = 2e-71, Method: Composition-based stats. Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 18/234 (7%) Query: 2 RLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVR-NAAFKLLPEHDVAYDGNPLAQQHGP 60 +L K +A+ SR I RV+VDG+I + ++ P + DG+ ++ + Sbjct: 8 KLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEVTPGLKIRIDGHLISVRESA 67 Query: 61 ----RYFMLNKPQGYVCSTDDPD-HPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDG 115 R KP+G +C+ +DP+ PTV L + + A GRLD++T GL+L T DG Sbjct: 68 EQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFTTDG 127 Query: 116 QWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPT--- 172 + ++R+ P E+ Y V + V D ++GVQL + PA + I + Sbjct: 128 ELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDG-----PAAFKTIKFSGGE 182 Query: 173 ----QVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPL 222 +T++EGR +V+R++ AVG V L R R G I L L G + L Sbjct: 183 GINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTEL 236 >2GML-A nrPDB Length = 237 Score = 210 bits (534), Expect = 5e-55, Method: Composition-based stats. Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 5/169 (2%) Query: 62 YFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHRI 121 LNKP G V +T+D + ++ F++ + ++ GRLD D+ GL+ +T+ G ++I Sbjct: 16 LIALNKPVGIVSTTEDGERDNIVDFVNH--SKRVFPIGRLDKDSQGLIFLTNHGDLVNKI 73 Query: 122 TSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISEG 181 + EK YLVT++ P+ ++ + GV + E P R+T+ +G Sbjct: 74 LRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKE--APFVFRITLVQG 131 Query: 182 RYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIASV 230 Q++RM G V +L R RI ++L + GE+R LT++E+ + Sbjct: 132 LNRQIRRMCEHFGYEVKKLERTRIMNVSLSG-IPLGEWRDLTDDELIDL 179 >2OLW-A nrPDB Length = 217 Score = 191 bits (486), Expect = 2e-49, Method: Composition-based stats. Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 22/182 (12%) Query: 61 RYFMLNKPQGYVCS-TDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSH 119 R + NKP + TD+ T+ F+ ++AAGRLD D+ GL+++T++G Sbjct: 40 RVILFNKPYDVLPQFTDEAGRKTLKEFIP---VQGVYAAGRLDRDSEGLLVLTNNGALQA 96 Query: 120 RITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLT-------KPAVL------ 166 R+T P K Y V +E D E GV L++ L +PA L Sbjct: 97 RLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPP 156 Query: 167 ----EVITPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPL 222 + I + +++T+ EGR QV+RM A VG + L R +G +LD +LA GE+R + Sbjct: 157 IRERKSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLD-NLANGEWREV 215 Query: 223 TE 224 T+ Sbjct: 216 TD 217 >2OML-A nrPDB Length = 189 Score = 190 bits (483), Expect = 4e-49, Method: Composition-based stats. Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 22/182 (12%) Query: 61 RYFMLNKPQGYVCS-TDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLVLMTDDGQWSH 119 R + NKP + TD+ T+ F+ ++AAGRLD D+ GL+++T++G Sbjct: 12 RVILFNKPYDVLPQFTDEAGRKTLKEFIP---VQGVYAAGRLDRDSEGLLVLTNNGALQA 68 Query: 120 RITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLT-------KPAVL------ 166 R+T P K Y V +E D E GV L++ L +PA L Sbjct: 69 RLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPP 128 Query: 167 ----EVITPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGEYRPL 222 + I + +++T+ EGR QV+RM A VG + L R +G +LD +LA GE+R + Sbjct: 129 IRERKSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLD-NLANGEWREV 187 Query: 223 TE 224 T+ Sbjct: 188 TD 189 >2IST-A nrPDB Length = 325 Score = 56.6 bits (135), Expect = 1e-08, Method: Composition-based stats. Identities = 51/234 (21%), Positives = 88/234 (37%), Gaps = 39/234 (16%) Query: 2 RLDKFIAQQL-GVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLA----- 55 RLD+ +A+ SR+ I RV V+G++ K+L VA + Sbjct: 18 RLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVLGGEQVAINAEIEEEARFE 77 Query: 56 --------QQHGPRYFMLNKPQGYVCSTDDPDHP-TVLYFLDE--------PVAWKLHAA 98 ++NKP+ V + TVL L P A +H Sbjct: 78 PQDIPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVH-- 135 Query: 99 GRLDIDTTGLVLMTDDGQWSHRITSP--RHHCEKTYLV----------TLESPVADDTAE 146 RLD DTTGL+++ R+ R + Y T++ P++ + Sbjct: 136 -RLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTAGGTVDEPISRHPTK 194 Query: 147 QFAKGVQLHNEKDLTKPAVLEVITP-TQVRLTISEGRYHQVKRMFAAVGNHVVE 199 + V + +T ++E T++RL + GR HQ++ A + + +V Sbjct: 195 RTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAHITHPLVG 248 >1PRZ-A nrPDB Length = 252 Score = 42.7 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 64/164 (39%), Gaps = 25/164 (15%) Query: 58 HGPRYFMLNKPQGYVCSTDDPDHP-TVLYFLDE--------PVAWKLHAAGRLDIDTTGL 108 ++NKP+ V + TVL L P A +H RLD DTTGL Sbjct: 15 EDEDIIVINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVH---RLDKDTTGL 71 Query: 109 VLMTDDGQWSHRITSP--RHHCEKTYLV----------TLESPVADDTAEQFAKGVQLHN 156 +++ R+ R + Y T++ P++ ++ V Sbjct: 72 MVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVHPMG 131 Query: 157 EKDLTKPAVLEVITP-TQVRLTISEGRYHQVKRMFAAVGNHVVE 199 + +T ++E T++RL + GR HQ++ A + + +V Sbjct: 132 KPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAHITHPLVG 175 >6CFJ-1d nrPDB Length = 209 Score = 38.1 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 2 RLDKFIAQQL-GVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAY 49 RLD + + VSR A + +R +TV+G V ++++ P ++A Sbjct: 100 RLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAV 148 >5UBA-A nrPDB Length = 295 Score = 37.0 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 21/115 (18%) Query: 45 HDVAYDGNPLAQ-------QHGPRYFMLNKPQGY---------VCSTDDPDHPTVLYFLD 88 ++ + GN LA+ ++NKP G +C TD P + L Sbjct: 12 ENLYFQGNVLAKALTRGILHQDKNLVVINKPYGLPVHGGPGVQLCITD--VLPILAKMLH 69 Query: 89 EPVAWKLHAAGRLDIDTTGLVLMTDDGQWSHR---ITSPRHHCEKTYLVTLESPV 140 A LH RLD +TTG++++ D +H+ + R +K + +T+ P+ Sbjct: 70 GHKAEPLHLCHRLDKETTGVMVLAWDKDMAHQVQELFRTRQVVKKYWAITVHVPM 124 >1V9K-A nrPDB Length = 228 Score = 34.7 bits (78), Expect = 0.031, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 61/179 (34%), Gaps = 20/179 (11%) Query: 58 HGPRYFMLNKPQGYVCSTDDPDHPTVLYFLD--EPVAWKLHAAGRLDIDTTGLVLMTDDG 115 +LNKP G V+ L P A L RLD DT+G++L+ Sbjct: 7 EDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKR 66 Query: 116 QWSHRITSPRHH--CEKTYLV-----------TLESPVADDTAEQFAKGVQLHNEKDLTK 162 + +K YL ++++P+ + + + V++ E ++ Sbjct: 67 SALRSLHEQLREKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSE 126 Query: 163 ---PAVLEVITPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGE 218 T VR + GR HQ++ G+ + +R G D L Sbjct: 127 TRFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIA--FDDRYGDREFDRQLTEAG 183 >4V75-AD nrPDB Length = 206 Score = 34.7 bits (78), Expect = 0.039, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 2 RLDKFIAQQL-GVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAY 49 RLD + + G +RA A + + + V+G +V A++++ P V+ Sbjct: 97 RLDNVVYRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSI 145 >5MYJ-AD nrPDB Length = 203 Score = 34.3 bits (77), Expect = 0.045, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Query: 2 RLDKFIAQQLGVS-RAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAY 49 RLD + + + R A + + + VDG+ V +F++ P ++ Sbjct: 94 RLDNVVYRLGLATTRRQARQFVNHGHILVDGKRVDIPSFRVQPGQVISV 142 >1JIJ-A nrPDB Length = 420 Score = 34.3 bits (77), Expect = 0.046, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Query: 14 SRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHG-PRYFMLN 66 S+ A ++ + ++GE ++ + L PE + DG + G +YFM+N Sbjct: 367 SKRQAREDVNNGAIYINGERQQDVNYALAPEDKI--DGEFTIIRRGKKKYFMVN 418 >3KBG-A nrPDB Length = 213 Score = 33.9 bits (76), Expect = 0.062, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 35/100 (35%), Gaps = 10/100 (10%) Query: 16 AIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGPRYFMLNKPQGYVCST 75 A R + V VDG+ VR F + + +G R N V Sbjct: 25 REAARILANGLVKVDGKTVREKKFAVGFMDVIEING------ESYRVV-YNDQGALVLMK 77 Query: 76 DDPDHPTVLYFLDEPVAWKLHAAGRLDIDT-TGLVLMTDD 114 + + ++ L + + + R+ + T G +TDD Sbjct: 78 ETKERASMK--LLKVRSKVIAPGNRIQLGTHDGRTFITDD 115 >1C06-A nrPDB Length = 159 Score = 31.2 bits (69), Expect = 0.43, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 2 RLDKFIAQQLGV-SRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAY 49 RLD + + +R A + + + VDG V ++++ P +A Sbjct: 52 RLDNLVYRLGLARTRRQARQLVTHGHILVDGSRVNIPSYRVKPGQTIAV 100 >5ND8-d nrPDB Length = 200 Score = 31.2 bits (69), Expect = 0.44, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 21/49 (42%), Gaps = 1/49 (2%) Query: 2 RLDKFIAQQLGV-SRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAY 49 RLD + +R A + + + VDG+ V ++ + P ++ Sbjct: 93 RLDAVVYSLGLARTRRQARQLVNHGHILVDGKRVDIPSYSVKPGQTISV 141 >3TS1-A nrPDB Length = 419 Score = 28.9 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Query: 14 SRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGPRYFML 65 S+ A +I+ + V+GE +++ L EH +G + G + + L Sbjct: 366 SKRQAREDIQNGAIYVNGERLQDVGAILTAEH--RLEGRFTVIRRGKKKYYL 415 >6HA8-d nrPDB Length = 200 Score = 28.5 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 1/49 (2%) Query: 2 RLDKFIAQQLGV-SRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAY 49 RLD + + +R A + + + VDG V ++ + P + Sbjct: 93 RLDNVVYKLGLARTRRQARQLVNHGHILVDGSRVDIPSYLVKPGQTIGV 141 >1JH3-A nrPDB Length = 107 Score = 28.5 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Query: 14 SRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGPRYFML 65 S+ A +I+ + V+GE +++ L EH +G + G + + L Sbjct: 46 SKRQAREDIQNGAIYVNGERLQDVGAILTAEH--RLEGRFTVIRRGKKKYYL 95 >5MRF-DD nrPDB Length = 486 Score = 28.5 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Query: 2 RLDKFIAQQLGVSR-AIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAY 49 RLD + + + S A + I V V+G +++ ++ L P + Sbjct: 104 RLDFALFRAMFASSVRQARQFILHGNVRVNGVKIKHPSYTLKPGDMFSV 152 >2IW3-A nrPDB Length = 986 Score = 28.5 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 14/114 (12%) Query: 129 EKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTK--PAVLEVITPTQVRLTISEGRY--- 183 ++ + + ++ AE K ++ + + + + G Sbjct: 770 DRETMDRANRQINENDAEAMNKIFKIEGTPRRIAGIHSRRKFKNTYEYECSFLLGENIGM 829 Query: 184 ---HQVKRM-----FAAVGNHVVELHRERIGGITLDADLAPGEYRPLTEEEIAS 229 V M + G +VE H + + + + LA G++RPLT +EI Sbjct: 830 KSERWVPMMSVDNAWIPRG-ELVESHSKMVAEVDMKEALASGQFRPLTRKEIEE 882 >4MQD-A nrPDB Length = 135 Score = 28.1 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 28/82 (34%), Gaps = 1/82 (1%) Query: 139 PVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRLTISEGRYHQVKRMFAAVGNHVV 198 PV D T E KG + + A RL SE K++ Sbjct: 30 PVMDWTDEAIEKGYAAADGAISFE-AQRNTKAFILFRLNSSETVNSYEKKVTVPFHVTEN 88 Query: 199 ELHRERIGGITLDADLAPGEYR 220 +H E I L DL G+Y+ Sbjct: 89 GIHIESIMSKRLSFDLPKGDYQ 110 >3PB8-X nrPDB Length = 330 Score = 27.3 bits (59), Expect = 4.9, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 15/40 (37%) Query: 137 ESPVADDTAEQFAKGVQLHNEKDLTKPAVLEVITPTQVRL 176 V DD +GV + + PAV T+V L Sbjct: 269 FGSVEDDHIPFLRRGVPVLHLISTPFPAVWHTPADTEVNL 308 >1PXT-A nrPDB Length = 390 Score = 27.3 bits (59), Expect = 5.0, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 17/62 (27%) Query: 22 IRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHGPRYFMLNKPQGYVCSTDDPDHP 81 I V + +I R + + P G +C +D+ P Sbjct: 161 ITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRP 220 Query: 82 TV 83 V Sbjct: 221 NV 222 >6DU7-A nrPDB Length = 448 Score = 27.3 bits (59), Expect = 5.1, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 37/106 (34%), Gaps = 15/106 (14%) Query: 15 RAIAGREIRGNRVTVDGEIVRNAAF------KLLPEHDVAYDGNPLAQQH-----GPRYF 63 R I R + DG RN + + H V+ +G + +H G Sbjct: 84 RRNRESYIDRARSSYDGSFKRNGVDLIEGHAEFVDSHTVSVNGELIRAKHIVIATGAHPS 143 Query: 64 MLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLDIDTTGLV 109 + N P + V + + P + + AG + ++ G++ Sbjct: 144 IPNIPGAEL----GGSSDDVFAWEELPESVAILGAGYIAVELAGVL 185 >4FE4-A nrPDB Length = 392 Score = 27.3 bits (59), Expect = 5.5, Method: Composition-based stats. Identities = 10/79 (12%), Positives = 25/79 (31%), Gaps = 15/79 (18%) Query: 128 CEKTYLVTLESPVADDTAEQFAKGVQLHNEKDLTK---------PAVLEVITPTQVRLTI 178 E+ Y VA++ GV + + L+ + P + + Sbjct: 137 TEREYAFR--QLVAEEKYR----GVVYQGLETAPENWQHAQNRLADWLQTLPPQTGIIAV 190 Query: 179 SEGRYHQVKRMFAAVGNHV 197 ++ R + ++ + V Sbjct: 191 TDARARHILQVCEHLHIPV 209 >5Z81-A nrPDB Length = 127 Score = 27.0 bits (58), Expect = 8.2, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 8/54 (14%) Query: 1 MRLDKFI-AQQLGVSRAIAGREIRGNRVTVDGEIVR-------NAAFKLLPEHD 46 +RLDK++ A + +R++A + G +V +G+ + A L HD Sbjct: 10 VRLDKWLWAARFYKTRSLARNMVEGGKVHYNGQRAKPSKSVEIGAQITLRQGHD 63 >3EPJ-A nrPDB Length = 409 Score = 27.0 bits (58), Expect = 8.2, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 6 FIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQQHG 59 IA GV ++ ++ +GE++ + + ++ + + + +PL ++ G Sbjct: 6 VIAGTTGVGKSQLSIQLAQ---KFNGEVINSDSMQVYKDIPIITNKHPLQEREG 56 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.133 0.323 Lambda K H 0.267 0.0413 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,190,931 Number of Sequences: 36641 Number of extensions: 309201 Number of successful extensions: 833 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 36 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 765 Number of HSP's gapped (non-prelim): 54 length of query: 231 length of database: 10,336,785 effective HSP length: 94 effective length of query: 137 effective length of database: 6,892,531 effective search space: 944276747 effective search space used: 944276747 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 57 (26.6 bits)