BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P0A7C2
         (202 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

1JHH-A nrPDB                                                          406   e-114
1JHE-A nrPDB                                                          263   3e-71
1LEA-A nrPDB                                                          167   2e-42
3K2Z-A nrPDB                                                          118   2e-27
6A2Q-A nrPDB                                                           71   4e-13
1AY9-A nrPDB                                                           63   1e-10
1PFF-A nrPDB                                                           30   0.95 
4XFK-A nrPDB                                                           28   2.4  
1QXP-A nrPDB                                                           28   2.7  
1YXA-A nrPDB                                                           28   3.4  
4WEN-A nrPDB                                                           27   4.9  
4WEM-A nrPDB                                                           27   4.9  
2CE7-A nrPDB                                                           27   6.5  
1I1G-A nrPDB                                                           27   6.9  
5IXC-A nrPDB                                                           27   8.0  

>1JHH-A nrPDB
          Length = 202

 Score =  406 bits (1043), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 201/202 (99%), Positives = 202/202 (100%)

Query: 1   MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVS 60
           MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVS
Sbjct: 1   MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVS 60

Query: 61  GASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSM 120
           GASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGM+M
Sbjct: 61  GASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMAM 120

Query: 121 KDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVD 180
           KDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVD
Sbjct: 121 KDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVD 180

Query: 181 LRQQSFTIEGLAVGVIRNGDWL 202
           LRQQSFTIEGLAVGVIRNGDWL
Sbjct: 181 LRQQSFTIEGLAVGVIRNGDWL 202


>1JHE-A nrPDB
          Length = 135

 Score =  263 bits (673), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 131/135 (97%), Positives = 131/135 (97%)

Query: 68  LLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMD 127
           LLQEEEEGLPLVGRVAAGEPL AQ HIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMD
Sbjct: 1   LLQEEEEGLPLVGRVAAGEPLPAQWHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMD 60

Query: 128 GDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFT 187
           GDLLAVHKTQDVRNGQVVVARIDD VTV RLKKQGNKVELLPENSEFKPIVVDLRQQSFT
Sbjct: 61  GDLLAVHKTQDVRNGQVVVARIDDAVTVARLKKQGNKVELLPENSEFKPIVVDLRQQSFT 120

Query: 188 IEGLAVGVIRNGDWL 202
           IEGLAVGVIRNGDWL
Sbjct: 121 IEGLAVGVIRNGDWL 135


>1LEA-A nrPDB
          Length = 84

 Score =  167 bits (424), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 84/84 (100%), Positives = 84/84 (100%)

Query: 1  MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVS 60
          MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVS
Sbjct: 1  MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVS 60

Query: 61 GASRGIRLLQEEEEGLPLVGRVAA 84
          GASRGIRLLQEEEEGLPLVGRVAA
Sbjct: 61 GASRGIRLLQEEEEGLPLVGRVAA 84


>3K2Z-A nrPDB
          Length = 196

 Score =  118 bits (296), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/197 (37%), Positives = 109/197 (55%), Gaps = 6/197 (3%)

Query: 4   LTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFR-SPNAAEEHLKALARKGVIEIVSGA 62
           LT RQ++V   I + I + G PP+  EIA+R  FR +P  A  HL AL +KG IE  +G 
Sbjct: 3   LTERQRKVLLFIEEFIEKNGYPPSVREIARR--FRITPRGALLHLIALEKKGYIERKNGK 60

Query: 63  SRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNAD-FLLRVSGMSMK 121
            R +R+ +     +PL+G + AGE   A +++E + ++  S      D FLL+V G SM 
Sbjct: 61  PRALRISKSIRNKIPLIGEIRAGEKREAIEYLEDYIEIPESFLSSGYDHFLLKVKGESMI 120

Query: 122 DIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDL 181
           +  I DGDL+ V +    +NG +V A +D EVT+ +  ++G+ VEL P N E   +    
Sbjct: 121 EEHICDGDLVLVRRQDWAQNGDIVAAMVDGEVTLAKFYQRGDTVELRPANREMSSMF--F 178

Query: 182 RQQSFTIEGLAVGVIRN 198
           R +   I G  VGV R 
Sbjct: 179 RAEKVKILGKVVGVFRK 195


>6A2Q-A nrPDB
          Length = 118

 Score = 70.9 bits (172), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 58/113 (51%), Gaps = 4/113 (3%)

Query: 85  GEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQV 144
           G P+LA++ +E  + +   L      FLL+V G SM +  I DGD + V +     NG +
Sbjct: 8   GGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDI 67

Query: 145 VVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIR 197
           V A ID E TVK  K+ G +V L+P N  F PI         T+ G  V VIR
Sbjct: 68  VAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPI----PGNDATVLGKVVTVIR 116


>1AY9-A nrPDB
          Length = 108

 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 55/91 (60%), Gaps = 2/91 (2%)

Query: 107 PNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVE 166
           P+A + ++ SG SM D GI DGDLL V       +G +V+A +D E TVK+L+ +   V+
Sbjct: 17  PSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQ 75

Query: 167 LLPENSEFKPIVVDLRQQSFTIEGLAVGVIR 197
           L+P NS + PI +   + +  + G+ + V++
Sbjct: 76  LIPMNSAYSPITIS-SEDTLDVFGVVIHVVK 105


>1PFF-A nrPDB
          Length = 331

 Score = 29.6 bits (65), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 9/89 (10%)

Query: 90  AQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARI 149
           A ++I GH  V   L    AD + +V    +KDI    G +++ H    +  G + +   
Sbjct: 143 ATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDI---TGAIISPHDAWLITRGTLTL--- 196

Query: 150 DDEVTVKRLKKQGNKV-ELLPENSEFKPI 177
             ++ VKR  +   KV E L E+   K +
Sbjct: 197 --DMRVKRAAENAQKVAEFLHEHKAVKKV 223


>4XFK-A nrPDB
          Length = 399

 Score = 28.1 bits (61), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 19/102 (18%)

Query: 105 FKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQ----DVRNGQVVVAR-IDDEVTVKRLK 159
           F PNA    +     MKD GI+     ++++      DV N  V  A+ I  EV  K L 
Sbjct: 134 FSPNAAIRFKTVAQGMKDKGILGERAYSINQNYSWGVDVENTVVANAKEIGYEVVDKTLH 193

Query: 160 KQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDW 201
           +  NK++      +F P V         I+   V  +  G+W
Sbjct: 194 EV-NKIQ------DFSPYVAK-------IQAANVDTVFTGNW 221


>1QXP-A nrPDB
          Length = 900

 Score = 28.1 bits (61), Expect = 2.7,   Method: Composition-based stats.
 Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 25/108 (23%)

Query: 96  GHYQVDPSLFKPN--ADFLLRV-----SGMSMKDIGIM----DGDLLAVHKTQDVRNGQV 144
           G Y V PS F+PN   DFLLR      +G    D  I     D  +L+  +  D  N + 
Sbjct: 481 GEYIVVPSTFEPNKEGDFLLRFFSEKKAGTQELDDQIQANLPDEKVLSEEEIDD--NFKT 538

Query: 145 VVARI---DDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIE 189
           + +++   D E++VK L+   N++      S+ K    DLR   F++E
Sbjct: 539 LFSKLAGDDMEISVKELQTILNRII-----SKHK----DLRTNGFSLE 577


>1YXA-A nrPDB
          Length = 398

 Score = 27.7 bits (60), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 2/77 (2%)

Query: 105 FKPNADFLLR--VSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQG 162
           F  + D+ L   +S + ++++     DL A+  T+D+R  QVV   + D           
Sbjct: 294 FSISTDYSLEDVLSKLGIREVFSTQADLSAITGTKDLRVSQVVHKAVLDVAETGTEAAAA 353

Query: 163 NKVELLPENSEFKPIVV 179
             V+ +P +++  P+ V
Sbjct: 354 TGVKFVPMSAKLYPLTV 370


>4WEN-A nrPDB
          Length = 275

 Score = 27.3 bits (59), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 18/142 (12%)

Query: 20  SQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLV 79
           ++ G     A  A  LG     +A+  L +L   G+  I  G             GLP  
Sbjct: 112 TKVGSVKVNASYAGVLGRGGVTSADGELLSLFADGLSSIFYG-------------GLPRG 158

Query: 80  GRVAAGEPLLAQQHIEGHYQVDPSL-----FKPNADFLLRVSGMSMKDIGIMDGDLLAVH 134
             ++AG    A+  + G    +  L        N   L+ V+G   +++   DG +++  
Sbjct: 159 SELSAGSAAAARTKLFGSLSRNDILGQIQRVNANITSLVDVAGSYRENMEYTDGTVVSAA 218

Query: 135 KTQDVRNGQVVVARIDDEVTVK 156
               + NGQ + A  +  VT  
Sbjct: 219 YALGIANGQTIEATFNQAVTTS 240


>4WEM-A nrPDB
          Length = 272

 Score = 27.3 bits (59), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 18/142 (12%)

Query: 20  SQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLV 79
           ++ G     A  A  LG     +A+  L +L   G+  I  G             GLP  
Sbjct: 112 TKVGSVKVNASYAGVLGRGGVTSADGELLSLFADGLSSIFYG-------------GLPRG 158

Query: 80  GRVAAGEPLLAQQHIEGHYQVDPSL-----FKPNADFLLRVSGMSMKDIGIMDGDLLAVH 134
             ++AG    A+  + G    +  L        N   L+ V+G   +++   DG +++  
Sbjct: 159 SELSAGSAAAARTKLFGSLSRNDILGQIQRVNANITSLVDVAGSYRENMEYTDGTVVSAA 218

Query: 135 KTQDVRNGQVVVARIDDEVTVK 156
               + NGQ + A  +  VT  
Sbjct: 219 YALGIANGQTIEATFNQAVTTS 240


>2CE7-A nrPDB
          Length = 476

 Score = 26.9 bits (58), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 4/80 (5%)

Query: 33  QRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQ 92
           +R+ F+    AEE ++ L  K V+E +   S+  R+     +G+ LVG    G+ LLA+ 
Sbjct: 11  KRVTFKDVGGAEEAIEEL--KEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARA 68

Query: 93  HIEGHYQVDPSLFKPNADFL 112
            + G   V P      +DF+
Sbjct: 69  -VAGEANV-PFFHISGSDFV 86


>1I1G-A nrPDB
          Length = 141

 Score = 26.6 bits (57), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)

Query: 29 AEIAQRLGFRSPNAAEEHLKALARKGVIE 57
           EIA++LG  S  A  + +KAL  KG+IE
Sbjct: 22 TEIAKKLGI-SETAVRKRVKALEEKGIIE 49


>5IXC-A nrPDB
          Length = 814

 Score = 26.6 bits (57), Expect = 8.0,   Method: Composition-based stats.
 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 8/84 (9%)

Query: 15  IRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVI-EIVSGASRGIRLLQEEE 73
           +R  +   G P    E+A  LGF     AEE      RK V+ + +  A +  R LQE+E
Sbjct: 269 VRLQLKAEGCP---EELAVHLGFNL--CAEEQAFLSRRKQVVAKALKQALQLDRDLQEDE 323

Query: 74  EGLPLVGRVAAGEPLLAQQHIEGH 97
             +P+VG +A G    A   + GH
Sbjct: 324 --VPVVGIMATGGGARAMTSLYGH 345


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

1JHH-A nrPDB                                                          329   6e-91
3K2Z-A nrPDB                                                          265   1e-71
1JHE-A nrPDB                                                          218   1e-57
6A2Q-A nrPDB                                                          156   5e-39
1LEA-A nrPDB                                                          140   5e-34
1AY9-A nrPDB                                                          123   5e-29

Sequences not found previously or not previously below threshold:

3BDN-A nrPDB                                                           48   2e-06
6DA7-A nrPDB                                                           32   0.20 
5ZE4-A nrPDB                                                           32   0.20 
5KQU-A nrPDB                                                           32   0.23 
5KQW-A nrPDB                                                           30   0.74 
3H3A-A nrPDB                                                           29   1.2  
5NNN-A nrPDB                                                           29   1.4  
5KR6-A nrPDB                                                           29   1.5  
5KQT-A nrPDB                                                           29   1.5  
1APX-A nrPDB                                                           29   1.6  
3J09-A nrPDB                                                           28   1.9  
3J08-A nrPDB                                                           28   1.9  
5KR3-A nrPDB                                                           28   1.9  
2YR0-A nrPDB                                                           28   2.1  
4G2C-A nrPDB                                                           28   2.4  
5Y7G-A nrPDB                                                           28   3.0  
1SQG-A nrPDB                                                           28   3.3  
2FGE-A nrPDB                                                           28   3.6  
2RHH-A nrPDB                                                           27   5.4  
2VXY-A nrPDB                                                           27   6.1  
1VHO-A nrPDB                                                           27   7.2  
2HC8-A nrPDB                                                           27   8.5  

>1JHH-A nrPDB
          Length = 202

 Score =  329 bits (843), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 201/202 (99%), Positives = 202/202 (100%)

Query: 1   MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVS 60
           MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVS
Sbjct: 1   MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVS 60

Query: 61  GASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSM 120
           GASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGM+M
Sbjct: 61  GASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMAM 120

Query: 121 KDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVD 180
           KDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVD
Sbjct: 121 KDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVD 180

Query: 181 LRQQSFTIEGLAVGVIRNGDWL 202
           LRQQSFTIEGLAVGVIRNGDWL
Sbjct: 181 LRQQSFTIEGLAVGVIRNGDWL 202


>3K2Z-A nrPDB
          Length = 196

 Score =  265 bits (677), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 74/197 (37%), Positives = 109/197 (55%), Gaps = 6/197 (3%)

Query: 4   LTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFR-SPNAAEEHLKALARKGVIEIVSGA 62
           LT RQ++V   I + I + G PP+  EIA+R  FR +P  A  HL AL +KG IE  +G 
Sbjct: 3   LTERQRKVLLFIEEFIEKNGYPPSVREIARR--FRITPRGALLHLIALEKKGYIERKNGK 60

Query: 63  SRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNAD-FLLRVSGMSMK 121
            R +R+ +     +PL+G + AGE   A +++E + ++  S      D FLL+V G SM 
Sbjct: 61  PRALRISKSIRNKIPLIGEIRAGEKREAIEYLEDYIEIPESFLSSGYDHFLLKVKGESMI 120

Query: 122 DIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDL 181
           +  I DGDL+ V +    +NG +V A +D EVT+ +  ++G+ VEL P N E   +    
Sbjct: 121 EEHICDGDLVLVRRQDWAQNGDIVAAMVDGEVTLAKFYQRGDTVELRPANREMSSMF--F 178

Query: 182 RQQSFTIEGLAVGVIRN 198
           R +   I G  VGV R 
Sbjct: 179 RAEKVKILGKVVGVFRK 195


>1JHE-A nrPDB
          Length = 135

 Score =  218 bits (556), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 131/135 (97%), Positives = 131/135 (97%)

Query: 68  LLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMD 127
           LLQEEEEGLPLVGRVAAGEPL AQ HIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMD
Sbjct: 1   LLQEEEEGLPLVGRVAAGEPLPAQWHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMD 60

Query: 128 GDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFT 187
           GDLLAVHKTQDVRNGQVVVARIDD VTV RLKKQGNKVELLPENSEFKPIVVDLRQQSFT
Sbjct: 61  GDLLAVHKTQDVRNGQVVVARIDDAVTVARLKKQGNKVELLPENSEFKPIVVDLRQQSFT 120

Query: 188 IEGLAVGVIRNGDWL 202
           IEGLAVGVIRNGDWL
Sbjct: 121 IEGLAVGVIRNGDWL 135


>6A2Q-A nrPDB
          Length = 118

 Score =  156 bits (395), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 4/114 (3%)

Query: 85  GEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQV 144
           G P+LA++ +E  + +   L      FLL+V G SM +  I DGD + V +     NG +
Sbjct: 8   GGPILAEEAVEDVFPLPRELVGEGTLFLLKVIGDSMVEAAICDGDWVVVRQQNVADNGDI 67

Query: 145 VVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRN 198
           V A ID E TVK  K+ G +V L+P N  F PI         T+ G  V VIR 
Sbjct: 68  VAAMIDGEATVKTFKRAGGQVWLMPHNPAFDPI----PGNDATVLGKVVTVIRK 117


>1LEA-A nrPDB
          Length = 84

 Score =  140 bits (352), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 84/84 (100%), Positives = 84/84 (100%)

Query: 1  MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVS 60
          MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVS
Sbjct: 1  MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVS 60

Query: 61 GASRGIRLLQEEEEGLPLVGRVAA 84
          GASRGIRLLQEEEEGLPLVGRVAA
Sbjct: 61 GASRGIRLLQEEEEGLPLVGRVAA 84


>1AY9-A nrPDB
          Length = 108

 Score =  123 bits (309), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 62/107 (57%), Gaps = 3/107 (2%)

Query: 92  QHIEGHYQVDPSLFK-PNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARID 150
            ++E    ++  L + P+A + ++ SG SM D GI DGDLL V       +G +V+A +D
Sbjct: 1   DYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVD 60

Query: 151 DEVTVKRLKKQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIR 197
            E TVK+L+ +   V+L+P NS + PI +   + +  + G+ + V++
Sbjct: 61  GEFTVKKLQLRPT-VQLIPMNSAYSPITIS-SEDTLDVFGVVIHVVK 105


>3BDN-A nrPDB
          Length = 236

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 9/94 (9%)

Query: 106 KPNADFLLRVSGMSMK-----DIGIMDGDLLAVHKTQDVRNGQVVVARIDD-EVTVKRLK 159
             ++ F L V G SM           DG L+ V   Q V  G   +AR+   E T K+L 
Sbjct: 136 ASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFCIARLGGDEFTFKKLI 195

Query: 160 KQGNKVELLPENSEFKPIVVDLRQQSFTIEGLAV 193
           +   +V L P N ++  I  +   +S ++ G  +
Sbjct: 196 RGSGQVFLQPLNPQYPMIPCN---ESCSVVGKVI 226


>6DA7-A nrPDB
          Length = 501

 Score = 32.0 bits (71), Expect = 0.20,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 1/69 (1%)

Query: 61  GASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNA-DFLLRVSGMS 119
           G      ++Q  E G+P V  +   + +     +  ++     L +    D L+  S   
Sbjct: 215 GQPMPFAIVQGTEPGIPFVASMPLPDGIEEVGFLGAYFGEPLELVRAKTVDLLVPASAEI 274

Query: 120 MKDIGIMDG 128
           + +  +M G
Sbjct: 275 VIEGHVMPG 283


>5ZE4-A nrPDB
          Length = 573

 Score = 32.0 bits (71), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 48/116 (41%), Gaps = 20/116 (17%)

Query: 43  AEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDP 102
           A  HL A+AR   +E+       +   Q+  + +P +  +      +    +E  +++  
Sbjct: 289 AVLHLIAIARSVGLELT------LDDFQKVSDAVPFLADLKPSGKYV----MEDIHKI-- 336

Query: 103 SLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRL 158
                    +LR     + ++G+MDGD + V      +N + V +  + +  ++ L
Sbjct: 337 ----GGTPAVLRY----LLELGLMDGDCMTVTGQTLAQNLENVPSLTEGQEIIRPL 384


>5KQU-A nrPDB
          Length = 479

 Score = 31.6 bits (70), Expect = 0.23,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 42  AAEEHLKALARKGVIEIVSGASRGIRLLQEEEE---GLPLVGRVAAGEPLLAQQHI---E 95
           AA  +L  L R+ +    + A  G  L Q   E   G PLVG V     L A + +   E
Sbjct: 355 AALANLDILERENLT--ANAADVGAYLNQRLRETFEGHPLVGEVRGDGMLAALEFMADRE 412

Query: 96  GHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLL 131
                DP+L K             M    +  GD+L
Sbjct: 413 ARTPFDPAL-KVGPKVSAACLEDGMIARAMPHGDIL 447


>5KQW-A nrPDB
          Length = 479

 Score = 30.0 bits (66), Expect = 0.74,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 38/101 (37%), Gaps = 19/101 (18%)

Query: 42  AAEEHLKALARKGVIEIVSGASRGIRLLQEEEE---GLPLVGRVAAGEPLLAQQHIEG-- 96
           AA  +L  L R+ +    + A  G  L Q   E   G PLVG V     L A + +    
Sbjct: 355 AALANLDILERENLTG--NAADVGAYLQQRLRETFGGHPLVGEVRGVGMLAALEFMADKD 412

Query: 97  -HYQVDPSL-FKPNADFLLRVSG----MSMKDIGIMDGDLL 131
                DP+L   P      +VS       M    +  GD+L
Sbjct: 413 ARTPFDPALKVGP------KVSAACLEDGMIARAMPHGDIL 447


>3H3A-A nrPDB
          Length = 441

 Score = 29.3 bits (64), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 6/78 (7%)

Query: 33  QRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQ 92
           QR  FR     E  LK    +G +E  +G      L +  EE  PL   +         +
Sbjct: 186 QRFDFRIEETTERLLKQAVEEGYLERTTGPRLRQELEKILEEKNPL-KSIRRMAQFDVIK 244

Query: 93  HIEGHYQVDPSLFKPNAD 110
           H+        + + P+ D
Sbjct: 245 HL-----FPKTYYTPSMD 257


>5NNN-A nrPDB
          Length = 315

 Score = 29.3 bits (64), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 21/49 (42%)

Query: 76  LPLVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIG 124
           +  VG +  G P+ +  ++  HYQV   L  P A  L       + D G
Sbjct: 166 ITFVGDLLYGRPVHSLVYLLRHYQVKVQLVSPKALRLPPAVRQQLVDAG 214


>5KR6-A nrPDB
          Length = 479

 Score = 28.9 bits (63), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 40/119 (33%), Gaps = 19/119 (15%)

Query: 49  ALARKGVIEIVS----GASRGIRLLQEEEEGL---PLVGRVAAGEPLLAQQHIEGHYQVD 101
           ALA   +IE  +     A  G    Q   E     PLVG V     + A + +    +  
Sbjct: 356 ALANLDIIERENLTGNAADTGAYFQQRMRETFGDHPLVGEVRGVGLMAALEFVAD--KDK 413

Query: 102 PSLFKPNADFLLRVSG----MSMKDIGIMDGDL------LAVHKTQDVRNGQVVVARID 150
            + F P+     RVS       M    +  GD+      L + + +      +    +D
Sbjct: 414 RTRFDPSLKVGPRVSAACLEDGMIARAMPHGDILGFAPPLVITRAEVDEIVDIAKQAVD 472


>5KQT-A nrPDB
          Length = 479

 Score = 28.9 bits (63), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 5/58 (8%)

Query: 42  AAEEHLKALARKGVIEIVSGASRGIRLLQEEE---EGLPLVGRVAAGEPLLAQQHIEG 96
           AA  +L  L R+ +    + A  G  L Q+     EG PLVG V     L A + +  
Sbjct: 355 AALANLDILERENIT--ANAADVGGYLNQQLRQAFEGHPLVGEVRGDGMLAALEFMAD 410


>1APX-A nrPDB
          Length = 249

 Score = 28.9 bits (63), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 24/111 (21%)

Query: 40  PNAAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVG-------------RVAAGE 86
           P    +H   LA        +G    +RLL+  +E  P+V               +  G 
Sbjct: 55  PFGTIKHQAELAHGA----NNGLDIAVRLLEPIKEQFPIVSYADFYQLAGVVAVEITGGP 110

Query: 87  PLLAQQHIEGHYQVDPSLFKP----NADFLLRVSGMSMKDIGIMDGDLLAV 133
            +      E   +  P    P     +D L  V G +M   G+ D D++A+
Sbjct: 111 EVPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFGKAM---GLSDQDIVAL 158


>3J09-A nrPDB
          Length = 723

 Score = 28.5 bits (62), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 6/108 (5%)

Query: 43  AEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHI-EGHYQVD 101
           A + L  L  K  + I  G    + +   EE  +  +  V  GE +     + EG   VD
Sbjct: 201 AIKKLVGLQAKTAVVIRDGKEIAVPV---EEVAVGDIVIVRPGEKIPVDGVVVEGESYVD 257

Query: 102 PSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARI 149
            S+       +L+  G  +    I +  +L +  T+    G+ ++A+I
Sbjct: 258 ESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVG--GETLLAQI 303


>3J08-A nrPDB
          Length = 645

 Score = 28.5 bits (62), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 6/108 (5%)

Query: 43  AEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHI-EGHYQVD 101
           A + L  L  K  + I  G    + +   EE  +  +  V  GE +     + EG   VD
Sbjct: 123 AIKKLVGLQAKTAVVIRDGKEIAVPV---EEVAVGDIVIVRPGEKIPVDGVVVEGESYVD 179

Query: 102 PSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARI 149
            S+       +L+  G  +    I +  +L +  T+    G+ ++A+I
Sbjct: 180 ESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVG--GETLLAQI 225


>5KR3-A nrPDB
          Length = 479

 Score = 28.5 bits (62), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 34/96 (35%), Gaps = 9/96 (9%)

Query: 42  AAEEHLKALARKGVIEIVSGASRGIRLLQEEEEGL---PLVGRVAAGEPLLAQQHIEG-- 96
           AA  +L  L R+ +    + A  G  L Q   E     PLVG V     L A + +    
Sbjct: 355 AALANLDILERENLTG--NAADVGAYLQQRLHEAFGAHPLVGEVRGVGMLAALEFMADKD 412

Query: 97  -HYQVDPSLFKPNADFLLRVSGMSMKDIGIMDGDLL 131
                DP+L K             M    +  GD+L
Sbjct: 413 ARTPFDPAL-KVGPKVSAAALEDGMIARAMPHGDIL 447


>2YR0-A nrPDB
          Length = 263

 Score = 28.5 bits (62), Expect = 2.1,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 17/33 (51%)

Query: 15  IRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHL 47
           + + + + G+ P   E+A+    R+P  A E L
Sbjct: 179 VEEALRRLGLKPRTREVARWREERTPREALEAL 211


>4G2C-A nrPDB
          Length = 493

 Score = 28.1 bits (61), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 17/40 (42%)

Query: 65  GIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDPSL 104
           G+R    E  G  LVGR   G PL AQ     H+ V    
Sbjct: 295 GLRGEDRERAGAMLVGRFEDGTPLTAQSAPGSHHPVGNDF 334


>5Y7G-A nrPDB
          Length = 580

 Score = 28.1 bits (61), Expect = 3.0,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 40/113 (35%), Gaps = 21/113 (18%)

Query: 6   ARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRG 65
            +Q++ FDL +    Q+  P  R    + L  R    AE H  ALAR+      S A R 
Sbjct: 291 EKQRD-FDLAQRLYRQSSHPGARLRAIRSLE-RGERFAEAH--ALAREASCAPESDAERQ 346

Query: 66  --IRLLQEEEEGLPLVGRVAAG---------------EPLLAQQHIEGHYQVD 101
              RLL   +  L L  +  A                EP   +  +  H +  
Sbjct: 347 GLARLLPRLQGKLGLPRQARAAAPEIDRLDLCLAFPSEPCSVEWAVREHLEEP 399


>1SQG-A nrPDB
          Length = 429

 Score = 27.7 bits (60), Expect = 3.3,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 37/100 (37%), Gaps = 4/100 (4%)

Query: 78  LVGRVAAGEPLLAQQHIEGHYQVDPSLFKPNADFLLRVSGMSMKDIGIMDG----DLLAV 133
           L+ R+    P   Q  +E + Q  P   + N     R S +++ D   M G    D    
Sbjct: 149 LLKRLQKAYPEQWQSIVEANNQRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDA 208

Query: 134 HKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSE 173
            + +       +    D  VTV+    QG    L P+N E
Sbjct: 209 VRLETPAPVHALPGFEDGWVTVQDASAQGCMTWLAPQNGE 248


>2FGE-A nrPDB
          Length = 995

 Score = 27.7 bits (60), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 21/50 (42%)

Query: 133 VHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLR 182
           + ++   RNG +V    D +      K     ++LLPEN     +  D R
Sbjct: 748 IRRSLLARNGCIVNMTADGKSLTNVEKSVAKFLDLLPENPSGGLVTWDGR 797


>2RHH-A nrPDB
          Length = 325

 Score = 27.0 bits (58), Expect = 5.4,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 45/131 (34%), Gaps = 4/131 (3%)

Query: 67  RLLQEEEEGLPLVGRVAAGEPLLAQ--QHIEGHYQVDPSLFKPNADF--LLRVSGMSMKD 122
           R+L+  ++  P++      + +L Q  Q I         +    AD   ++   G ++  
Sbjct: 158 RILEIVDKNTPMLEAFREADNVLRQGVQGISDLIATPGLINLDFADVKTIMSNKGSALMG 217

Query: 123 IGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLR 182
           IGI  G+  A    +   +  ++ A ID    V      G  + L         +     
Sbjct: 218 IGIATGENRAAEAAKKAISSPLLEAAIDGAQGVLMNITGGTNLSLYEVQEAADIVASASD 277

Query: 183 QQSFTIEGLAV 193
           Q    I G  +
Sbjct: 278 QDVNMIFGSVI 288


>2VXY-A nrPDB
          Length = 382

 Score = 27.0 bits (58), Expect = 6.1,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 45/131 (34%), Gaps = 4/131 (3%)

Query: 67  RLLQEEEEGLPLVGRVAAGEPLLAQ--QHIEGHYQVDPSLFKPNADF--LLRVSGMSMKD 122
           R+L+  ++  P++      + +L Q  Q I         +    AD   ++   G ++  
Sbjct: 168 RILEIVDKNTPMLEAFREADNVLRQGVQGISDLIATPGLINLDFADVKTIMSNKGSALMG 227

Query: 123 IGIMDGDLLAVHKTQDVRNGQVVVARIDDEVTVKRLKKQGNKVELLPENSEFKPIVVDLR 182
           IGI  G+  A    +   +  ++ A ID    V      G  + L         +     
Sbjct: 228 IGIATGENRAAEAAKKAISSPLLEAAIDGAQGVLMNITGGTNLSLYEVQEAADIVASASD 287

Query: 183 QQSFTIEGLAV 193
           Q    I G  +
Sbjct: 288 QDVNMIFGSVI 298


>1VHO-A nrPDB
          Length = 346

 Score = 26.6 bits (57), Expect = 7.2,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 20/36 (55%)

Query: 119 SMKDIGIMDGDLLAVHKTQDVRNGQVVVARIDDEVT 154
           S+ + G+  GD+  + +T    NG+VV   +D+  +
Sbjct: 141 SLCERGVRVGDIAVIDQTAFETNGKVVGKALDNRAS 176


>2HC8-A nrPDB
          Length = 113

 Score = 26.6 bits (57), Expect = 8.5,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 6/108 (5%)

Query: 43  AEEHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHI-EGHYQVD 101
           A + L  L  K  + I  G    + +   EE  +  +  V  GE +     + EG   VD
Sbjct: 2   AIKKLVGLQAKTAVVIRDGKEIAVPV---EEVAVGDIVIVRPGEKIPVDGVVVEGESYVD 58

Query: 102 PSLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVARI 149
            S+       +L+  G  +    I +  +L +  T+    G+ ++A+I
Sbjct: 59  ESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVG--GETLLAQI 104


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.309    0.134    0.347 

Lambda     K      H
   0.267   0.0407    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,242,414
Number of Sequences: 36641
Number of extensions: 278879
Number of successful extensions: 1108
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 1074
Number of HSP's gapped (non-prelim): 57
length of query: 202
length of database: 10,336,785
effective HSP length: 92
effective length of query: 110
effective length of database: 6,965,813
effective search space: 766239430
effective search space used: 766239430
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 57 (26.6 bits)