BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P09527 (207 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6IYB-A nrPDB 395 e-111 5LDD-C nrPDB 320 2e-88 4PHF-A nrPDB 251 2e-67 2OCB-A nrPDB 213 3e-56 1WMS-A nrPDB 213 4e-56 4QXA-A nrPDB 209 5e-55 2FG5-A nrPDB 135 2e-32 5FBL-B nrPDB 134 2e-32 2HEI-A nrPDB 134 3e-32 2F9L-A nrPDB 134 3e-32 4UJ4-A nrPDB 132 8e-32 2A5J-A nrPDB 132 1e-31 2RHD-A nrPDB 131 2e-31 4KYI-B nrPDB 130 3e-31 5LPN-A nrPDB 130 4e-31 5SZJ-A nrPDB 130 5e-31 5SZH-B nrPDB 129 6e-31 1TU4-A nrPDB 129 6e-31 3L0I-B nrPDB 129 8e-31 1Z0A-A nrPDB 129 9e-31 6HUF-A nrPDB 129 1e-30 3CUE-F nrPDB 127 4e-30 3BFK-A nrPDB 127 4e-30 5XR6-A nrPDB 126 5e-30 5SZI-A nrPDB 126 7e-30 2WWX-A nrPDB 126 8e-30 4G01-B nrPDB 125 1e-29 4LHX-A nrPDB 125 1e-29 2EW1-A nrPDB 125 2e-29 1YZN-A nrPDB 124 2e-29 3TSO-A nrPDB 124 2e-29 1X3S-A nrPDB 124 3e-29 4RKE-A nrPDB 124 4e-29 2BMD-A nrPDB 123 4e-29 1Z22-A nrPDB 123 5e-29 6O62-A nrPDB 123 6e-29 3CPH-A nrPDB 122 1e-28 2OCY-C nrPDB 122 1e-28 2F7S-A nrPDB 122 1e-28 2IEZ-A nrPDB 122 1e-28 2GIL-A nrPDB 122 1e-28 1YVD-A nrPDB 121 2e-28 2O52-A nrPDB 120 3e-28 5LEF-A nrPDB 120 4e-28 2FFQ-A nrPDB 120 5e-28 2IEY-A nrPDB 120 6e-28 5YOZ-A nrPDB 120 6e-28 4RKF-A nrPDB 119 1e-27 2IL1-A nrPDB 118 1e-27 3BC1-A nrPDB 118 2e-27 1Z0F-A nrPDB 118 2e-27 6IF2-B nrPDB 118 2e-27 5UB8-A nrPDB 117 3e-27 3RAB-A nrPDB 117 4e-27 4CZ2-A nrPDB 117 4e-27 2G6B-A nrPDB 117 5e-27 1EK0-A nrPDB 116 8e-27 3CPJ-B nrPDB 115 2e-26 3DZ8-A nrPDB 115 2e-26 6FF8-A nrPDB 114 2e-26 1ZBD-A nrPDB 114 4e-26 1YZU-A nrPDB 113 5e-26 2GF9-A nrPDB 112 8e-26 2HUP-A nrPDB 112 1e-25 3RWM-B nrPDB 112 2e-25 2N1B-A nrPDB 110 5e-25 5UWI-A nrPDB 110 5e-25 5CLL-A nrPDB 110 5e-25 2G77-B nrPDB 108 1e-24 1Z06-A nrPDB 108 1e-24 5XOJ-A nrPDB 107 5e-24 3WYF-A nrPDB 106 6e-24 4DJT-A nrPDB 105 2e-23 1D5C-A nrPDB 103 5e-23 2P5S-A nrPDB 102 1e-22 4FMC-F nrPDB 99 1e-21 4M8N-E nrPDB 99 1e-21 4DXA-A nrPDB 98 2e-21 5CM8-B nrPDB 97 4e-21 1ZC4-A nrPDB 96 1e-20 3E5H-A nrPDB 95 2e-20 5WDR-A nrPDB 92 2e-19 5XC3-A nrPDB 91 4e-19 2KE5-A nrPDB 91 4e-19 2ERY-A nrPDB 89 1e-18 4KU4-A nrPDB 89 2e-18 3CLV-A nrPDB 88 2e-18 2J1L-A nrPDB 87 5e-18 3PIR-A nrPDB 87 7e-18 4WA7-A nrPDB 85 2e-17 3CON-A nrPDB 84 4e-17 5UHV-A nrPDB 84 4e-17 2J0V-A nrPDB 83 6e-17 5WDQ-A nrPDB 83 7e-17 2FN4-A nrPDB 83 1e-16 2WBL-C nrPDB 80 6e-16 4KLZ-A nrPDB 80 7e-16 3OES-A nrPDB 74 4e-14 4U5X-A nrPDB 74 5e-14 5ZHX-e nrPDB 73 7e-14 5C2K-A nrPDB 73 7e-14 5VCU-A nrPDB 73 1e-13 2FV8-A nrPDB 72 1e-13 2ATV-A nrPDB 72 1e-13 3TH5-A nrPDB 72 1e-13 2NTY-C nrPDB 72 2e-13 3BWD-D nrPDB 72 2e-13 2YC4-C nrPDB 72 2e-13 3A58-B nrPDB 71 3e-13 2WKQ-A nrPDB 71 3e-13 3RAP-R nrPDB 71 3e-13 4MIT-A nrPDB 71 4e-13 5JCP-B nrPDB 71 4e-13 2ATX-A nrPDB 70 5e-13 2W2X-A nrPDB 70 7e-13 3RYT-C nrPDB 70 9e-13 3VHL-B nrPDB 68 3e-12 2Q3H-A nrPDB 67 6e-12 2ERX-A nrPDB 66 1e-11 3T5G-A nrPDB 66 1e-11 1RYH-A nrPDB 65 2e-11 2GF0-A nrPDB 62 2e-10 5ZVP-A nrPDB 61 3e-10 2CJW-A nrPDB 59 1e-09 2NZJ-A nrPDB 59 1e-09 1M7B-A nrPDB 59 1e-09 1GWN-A nrPDB 59 1e-09 2G3Y-A nrPDB 59 1e-09 3IHW-A nrPDB 59 2e-09 2IWR-A nrPDB 57 4e-09 3REG-A nrPDB 57 5e-09 5C1S-A nrPDB 55 1e-08 2AL7-A nrPDB 54 3e-08 3CBQ-A nrPDB 54 4e-08 2REX-B nrPDB 53 7e-08 3Q72-A nrPDB 53 8e-08 3Q85-A nrPDB 53 1e-07 3C5C-A nrPDB 49 2e-06 3D6T-B nrPDB 48 2e-06 4ILE-A nrPDB 47 8e-06 4WNR-A nrPDB 46 1e-05 1G7S-A nrPDB 43 1e-04 5NZV-F nrPDB 43 1e-04 3DPU-A nrPDB 42 2e-04 6IAE-A nrPDB 42 2e-04 5HZH-A nrPDB 41 4e-04 5KH0-A nrPDB 40 5e-04 2LKD-A nrPDB 40 6e-04 2H16-A nrPDB 40 7e-04 3LRP-A nrPDB 40 8e-04 3GEH-A nrPDB 40 0.001 1YZG-A nrPDB 40 0.001 6CES-A nrPDB 38 0.003 4BAS-A nrPDB 38 0.003 6HLU-A nrPDB 38 0.003 4YLG-A nrPDB 37 0.007 2GJ9-A nrPDB 37 0.008 6GNI-B nrPDB 36 0.013 3LVQ-E nrPDB 35 0.015 2A5F-A nrPDB 35 0.017 1XZP-A nrPDB 35 0.019 3O47-A nrPDB 35 0.023 1KSG-A nrPDB 35 0.025 1M2O-B nrPDB 35 0.026 2H57-A nrPDB 35 0.033 4N3G-A nrPDB 34 0.035 4TN1-B nrPDB 34 0.036 5EE5-B nrPDB 34 0.037 3C5H-A nrPDB 34 0.037 6FAE-B nrPDB 34 0.039 4NCL-A nrPDB 34 0.041 6BBQ-A nrPDB 34 0.050 6D4G-A nrPDB 34 0.054 4ZI3-A nrPDB 33 0.065 2B6H-A nrPDB 33 0.068 5LAD-A nrPDB 33 0.074 1MOZ-A nrPDB 33 0.087 5IRR-A nrPDB 33 0.12 4ARZ-A nrPDB 32 0.24 3AQ4-A nrPDB 31 0.30 5UF8-A nrPDB 30 0.73 3BH6-A nrPDB 30 0.86 1YE8-A nrPDB 29 1.2 1Z6X-A nrPDB 29 1.2 5GM6-Y nrPDB 29 1.7 1MKY-A nrPDB 28 2.5 2QAG-B nrPDB 28 2.6 6CVN-D nrPDB 28 3.0 5LIZ-A nrPDB 28 3.1 1HEY-A nrPDB 28 3.7 1KKT-A nrPDB 28 3.9 4KV9-A nrPDB 27 4.7 1FP7-A nrPDB 27 4.7 5DE3-A nrPDB 27 5.9 2DYK-A nrPDB 27 6.1 2MYS-A nrPDB 27 6.4 3HSI-A nrPDB 27 8.2 5JXW-A nrPDB 27 8.6 6CY1-A nrPDB 26 9.2 >6IYB-A nrPDB Length = 199 Score = 395 bits (1014), Expect = e-111, Method: Compositional matrix adjust. Identities = 192/194 (98%), Positives = 192/194 (98%), Gaps = 1/194 (0%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 61 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI Sbjct: 7 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 66 Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121 WDTAG ERFQS GVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV Sbjct: 67 WDTAGLERFQS-GVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 125 Query: 122 VLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVE 181 VLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVE Sbjct: 126 VLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVE 185 Query: 182 LYNEFPEPIKLDKN 195 LYNEFPEPIKLDKN Sbjct: 186 LYNEFPEPIKLDKN 199 >5LDD-C nrPDB Length = 207 Score = 320 bits (821), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 159/210 (75%), Positives = 174/210 (82%), Gaps = 8/210 (3%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M+SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EVMVDDR VTMQ Sbjct: 3 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQ 62 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 +WDTAGQERFQSLGVAFYRGADCCVLVFDV +F LDSWRDEFLIQASPRDPENFPF Sbjct: 63 LWDTAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDEFLIQASPRDPENFPF 122 Query: 121 VVLGNKIDLE--NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQET 178 VVLG KID+E R ++TKRAQ +C SK IPYFETSAKEAINVE+AFQ IARNAL QE Sbjct: 123 VVLGIKIDVEESKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNALMQEE 182 Query: 179 EVELYNEFPEPIKLD-KNERAKASAESCSC 207 E +F +PI + +NER + C+C Sbjct: 183 SEEFSGDFQDPINIHIENER-----DGCAC 207 >4PHF-A nrPDB Length = 184 Score = 251 bits (641), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 123/179 (68%), Positives = 146/179 (81%), Gaps = 3/179 (1%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTM 59 M+SRKK +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV VD D++ TM Sbjct: 3 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVATM 62 Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119 Q+WDTAGQERFQSLGVAFYRGADCCVLV+DVT ++F+ + SWRDEFL+ A+ PE FP Sbjct: 63 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFP 122 Query: 120 FVVLGNKIDLENRQ--VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 FV+LGNKID E + V+ K AQ S +IP F TSAK AINV+ AF+ IAR+AL+Q Sbjct: 123 FVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQ 181 >2OCB-A nrPDB Length = 180 Score = 213 bits (543), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 100/179 (55%), Positives = 127/179 (70%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 62 S K +LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL +++ VD R VT+QIW Sbjct: 2 SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 DTAGQERF+SL FYRGADCC+L F V +F+ L +W+ EF+ A +DPE+FPFVV Sbjct: 62 DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121 Query: 123 LGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVE 181 LGNK+D E+RQV T+ AQ WC + PY ETSAK+ NV AF+ R L E ++E Sbjct: 122 LGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQLE 180 >1WMS-A nrPDB Length = 177 Score = 213 bits (542), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 98/173 (56%), Positives = 122/173 (70%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDT 64 K L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K++ VD VTMQIWDT Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63 Query: 65 AGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLG 124 AGQERF+SL FYRG+DCC+L F V +F+ L +W+ EF+ A ++PE+FPFV+LG Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123 Query: 125 NKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177 NKID+ RQV+T+ AQAWC + PYFETSAK+A NV AF+ R L E Sbjct: 124 NKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATE 176 >4QXA-A nrPDB Length = 208 Score = 209 bits (533), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 96/181 (53%), Positives = 125/181 (69%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M + K L K+I+LGD GVGK+SLMN+YV KF +Q TIG +FL K++ VD VTMQ Sbjct: 1 MMAGKSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQ 60 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 IWDTAG ERF+SL FYRG+DCC+L F V +F+ L +W+ EF+ A ++PE+FPF Sbjct: 61 IWDTAGLERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPF 120 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180 V+LGNK D++ RQV+T+ AQAWC + PYFETSAK++ NV AF+ R L E Sbjct: 121 VILGNKTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRS 180 Query: 181 E 181 E Sbjct: 181 E 181 >2FG5-A nrPDB Length = 192 Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 73/164 (44%), Positives = 98/164 (59%), Gaps = 6/164 (3%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 LKV +LGD+GVGK+S++ ++V F + TIGA F+TK V + L IWDTAGQE Sbjct: 24 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 83 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF SL +YRG+ V+V+D+T ++F TL W E PEN + GNK D Sbjct: 84 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKEL----KEHGPENIVMAIAGNKCD 139 Query: 129 LEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 L + R+V K A+ + S I ETSAK AIN+E+ FQ I+R Sbjct: 140 LSDIREVPLKDAKEYAESIGAI-VVETSAKNAINIEELFQGISR 182 >5FBL-B nrPDB Length = 221 Score = 134 bits (338), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 67/163 (41%), Positives = 107/163 (65%), Gaps = 6/163 (3%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L KV+++GDSGVGK++L++++ +F+ + K+TIG +F T+ + VD + + QIWDTAGQ Sbjct: 16 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 75 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ER++++ A+YRGA +LV+D+ T++ ++ W E A N +++GNK Sbjct: 76 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVGNKS 131 Query: 128 DLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169 DL + R V T A+A+ KN + + ETSA ++ NVE AFQTI Sbjct: 132 DLRHLRAVPTDEARAFA-EKNGLSFIETSALDSTNVEAAFQTI 173 >2HEI-A nrPDB Length = 179 Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 73/172 (42%), Positives = 104/172 (60%), Gaps = 6/172 (3%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +DD V +IWDTAGQE Sbjct: 9 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 68 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 R+ SL +YRGA ++V+D+T TF +W E QASP + + GNK D Sbjct: 69 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASP----SIVIALAGNKAD 124 Query: 129 LEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 L N R V + AQA+ N++ + ETSAK A+NV F IA+ K E + Sbjct: 125 LANKRMVEYEEAQAYA-DDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQ 175 >2F9L-A nrPDB Length = 199 Score = 134 bits (336), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 66/163 (40%), Positives = 107/163 (65%), Gaps = 6/163 (3%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L KV+++GDSGVGK++L++++ +F+ + K+TIG +F T+ + VD + + QIWDTAGQ Sbjct: 5 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 64 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ER++ + A+YRGA +LV+D+ T++ ++ W E A N +++GNK Sbjct: 65 ERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADS----NIVIMLVGNKS 120 Query: 128 DLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169 DL + R V T A+A+ KNN+ + ETSA ++ NVE+AF+ I Sbjct: 121 DLRHLRAVPTDEARAFA-EKNNLSFIETSALDSTNVEEAFKNI 162 >4UJ4-A nrPDB Length = 185 Score = 132 bits (333), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 66/163 (40%), Positives = 106/163 (65%), Gaps = 6/163 (3%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L KV+++GDSGVGK++L++++ +F+ + K+TIG +F T+ + VD + + QIWDTAG Sbjct: 10 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGL 69 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ER++++ A+YRGA +LV+D+ T++ ++ W E A N +++GNK Sbjct: 70 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADS----NIVIMLVGNKS 125 Query: 128 DLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169 DL + R V T A+A+ KN + + ETSA ++ NVE AFQTI Sbjct: 126 DLRHLRAVPTDEARAFA-EKNGLSFIETSALDSTNVEAAFQTI 167 >2A5J-A nrPDB Length = 191 Score = 132 bits (331), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 68/177 (38%), Positives = 108/177 (61%), Gaps = 6/177 (3%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 + R L K II+GD+GVGK+ L+ Q+ +K+F + TIG +F + V +D + + +Q Sbjct: 14 LVPRGSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQ 73 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 IWDTAGQE F+S+ ++YRGA +LV+D+T TF L SW ++ A N Sbjct: 74 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLED----ARQHSSSNMVI 129 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSK-NNIPYFETSAKEAINVEQAFQTIARNALKQ 176 +++GNK DLE+R+ KR + +++ + + + ETSAK A NVE+AF A+ ++ Sbjct: 130 MLIGNKSDLESRR-DVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 185 >2RHD-A nrPDB Length = 175 Score = 131 bits (329), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 65/164 (39%), Positives = 105/164 (64%), Gaps = 6/164 (3%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + + ++++ V +QIWDTAGQ Sbjct: 9 LFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQ 68 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDP-ENFPFVVLGNK 126 ERF+++ ++YRGA ++V+DVT ++F + W IQ R EN +++GNK Sbjct: 69 ERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQW-----IQEIDRYAMENVNKLLVGNK 123 Query: 127 IDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA 170 DL +++V T + I + ETSAK A NVEQAF T+A Sbjct: 124 CDLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMA 167 >4KYI-B nrPDB Length = 170 Score = 130 bits (328), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 70/164 (42%), Positives = 102/164 (62%), Gaps = 6/164 (3%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +DD V +IWDTAG E Sbjct: 10 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGLE 69 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 R+ SL +YRGA ++V+D+T +TF +W E QASP N + GNK D Sbjct: 70 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASP----NIVIALAGNKAD 125 Query: 129 LEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 L + R V + AQA+ N++ + ETSAK A+NV + F IA+ Sbjct: 126 LASKRAVEFQEAQAYA-DDNSLLFMETSAKTAMNVNEIFMAIAK 168 >5LPN-A nrPDB Length = 177 Score = 130 bits (327), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 63/170 (37%), Positives = 107/170 (62%), Gaps = 4/170 (2%) Query: 7 VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66 +L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K V + + + +QIWDTAG Sbjct: 10 LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 69 Query: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNK 126 QERF ++ ++YRGA +LV+D+T +F+ + W L E+ ++LGNK Sbjct: 70 QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNK 125 Query: 127 IDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 D+++++V K ++ I +FETSAK IN+E+AF T+A + L++ Sbjct: 126 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 175 >5SZJ-A nrPDB Length = 202 Score = 130 bits (326), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 63/170 (37%), Positives = 107/170 (62%), Gaps = 4/170 (2%) Query: 7 VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66 +L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K V + + + +QIWDTAG Sbjct: 10 LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 69 Query: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNK 126 QERF ++ ++YRGA +LV+D+T +F+ + W L E+ ++LGNK Sbjct: 70 QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNK 125 Query: 127 IDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 D+++++V K ++ I +FETSAK IN+E+AF T+A + L++ Sbjct: 126 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 175 >5SZH-B nrPDB Length = 203 Score = 129 bits (325), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 65/170 (38%), Positives = 101/170 (59%), Gaps = 4/170 (2%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + + +D + + +Q Sbjct: 3 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 62 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 IWDTAGQERF+++ ++YRGA ++V+DVT ++ + W E AS EN Sbjct: 63 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYAS----ENVNK 118 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA 170 +++GNK DL ++V IP+ ETSAK A NVEQAF T+A Sbjct: 119 LLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMA 168 >1TU4-A nrPDB Length = 171 Score = 129 bits (325), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 69/164 (42%), Positives = 102/164 (62%), Gaps = 6/164 (3%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +DD V +IWDTAGQE Sbjct: 8 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 67 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 R+ SL +YRGA ++V+D+T +F +W E QASP N + GNK D Sbjct: 68 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASP----NIVIALSGNKAD 123 Query: 129 LEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 L N R V + AQ++ N++ + ETSAK ++NV + F IA+ Sbjct: 124 LANKRAVDFQEAQSYA-DDNSLLFMETSAKTSMNVNEIFMAIAK 166 >3L0I-B nrPDB Length = 199 Score = 129 bits (324), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 64/163 (39%), Positives = 100/163 (61%), Gaps = 4/163 (2%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + + +D + + +QIWDTAGQ Sbjct: 33 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 92 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ERF+++ ++YRGA ++V+DVT +F + W E AS EN +++GNK Sbjct: 93 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAS----ENVNKLLVGNKC 148 Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA 170 DL ++V IP+ ETSAK A NVEQ+F T+A Sbjct: 149 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMA 191 >1Z0A-A nrPDB Length = 174 Score = 129 bits (324), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 64/164 (39%), Positives = 101/164 (61%), Gaps = 4/164 (2%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L K II+GD+GVGK+ L+ Q+ +K+F + TIG +F + + +D + + +QIWDTAGQ Sbjct: 10 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQ 69 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 E F+S+ ++YRGA +LV+D+T +TF L +W ++ A N +++GNK Sbjct: 70 ESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLED----ARQHSNSNMVIMLIGNKS 125 Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 DLE+R+ K ++ + + ETSAK A NVE+AF A+ Sbjct: 126 DLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAK 169 >6HUF-A nrPDB Length = 182 Score = 129 bits (323), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 65/169 (38%), Positives = 100/169 (59%), Gaps = 3/169 (1%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L+K + LGDSGVGKTS++ QY + KF++++ T+G DF K + +D+ + +Q+WDTAG Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKLQLWDTAGL 68 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ERF+SL AF+R A +L+FD+T +F + +W + A +P+ V+ GNK Sbjct: 69 ERFRSLTTAFFRDAMGFLLLFDLTNEESFLNVRNWISQLKTHAYSENPD---IVLCGNKS 125 Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 DLE+ +V IPYFETSA N+ QA + + +K+ Sbjct: 126 DLEDERVVAAAEARQLAEHYGIPYFETSAANGTNISQAIEMLLDLIMKR 174 >3CUE-F nrPDB Length = 206 Score = 127 bits (318), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 64/171 (37%), Positives = 104/171 (60%), Gaps = 4/171 (2%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M S L K++++G+SGVGK+ L+ ++ + ++N Y +TIG DF K V +D + V +Q Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQ 60 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 IWDTAGQERF+++ ++YRG+ ++V+DVT +F + W E A+ Sbjct: 61 IWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATS----TVLK 116 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 +++GNK DL++++V N +P+ ETSA ++ NVE AF T+AR Sbjct: 117 LLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMAR 167 >3BFK-A nrPDB Length = 181 Score = 127 bits (318), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 61/163 (37%), Positives = 104/163 (63%), Gaps = 5/163 (3%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV-DDRLVTMQIWDTAG 66 L K++++GDSGVGK++L++++ +F+ + K+TIG +F TK + + +++++ QIWDTAG Sbjct: 7 LFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAG 66 Query: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNK 126 QER++++ A+YRGA +LV+D+T N+F+ ++ W E A N +++GNK Sbjct: 67 QERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADS----NIVILLVGNK 122 Query: 127 IDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169 DL++ +V K + + ETSA EA NVE AF + Sbjct: 123 SDLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQL 165 >5XR6-A nrPDB Length = 194 Score = 126 bits (317), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 66/163 (40%), Positives = 103/163 (63%), Gaps = 6/163 (3%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L K++++GDSGVGK++L++++ +F+ + K+TIG +F TK V+ ++V QIWDTAGQ Sbjct: 25 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQ 84 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ER++++ A+YRGA +L++DVT TF+ W E P N +++GNK Sbjct: 85 ERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDP----NIVVMLIGNKC 140 Query: 128 DLENRQVATKRAQAWCYSKNNIPYF-ETSAKEAINVEQAFQTI 169 DL + VA K +A +++ YF ETSA +A NVE AF + Sbjct: 141 DLRH-LVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEV 182 >5SZI-A nrPDB Length = 209 Score = 126 bits (316), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 123/203 (60%), Gaps = 11/203 (5%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L K++++GDSGVGKT ++ ++ F++ + +TIG DF + + +D + + +QIWDTAGQ Sbjct: 10 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 69 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ERF+++ A+YRGA +LV+D+T +F + +W AS D E ++LGNK Sbjct: 70 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASA-DVEK---MILGNKC 125 Query: 128 DL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEF 186 D+ + RQV+ +R + I + ETSAK INVE AF T+AR+ +K + + +L Sbjct: 126 DVNDKRQVSKERGEKLALDY-GIKFMETSAKANINVENAFFTLARD-IKAKMDKKLEGNS 183 Query: 187 P----EPIKLDKNERAKASAESC 205 P + +K+ +++ ++S C Sbjct: 184 PQGSNQGVKITPDQQKRSSFFRC 206 >2WWX-A nrPDB Length = 175 Score = 126 bits (316), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 99/163 (60%), Gaps = 4/163 (2%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + + +D + + +QIWDTAGQ Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ERF+++ ++YRGA ++V+DVT +F + W E AS EN +++G K Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAS----ENVNKLLVGIKC 123 Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA 170 DL ++V IP+ ETSAK A NVEQ+F T+A Sbjct: 124 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMA 166 >4G01-B nrPDB Length = 181 Score = 125 bits (314), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 68/168 (40%), Positives = 101/168 (60%), Gaps = 6/168 (3%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDT 64 K + K+++LGD G GK+SL+ ++V +F ++TIGA F ++ + V+D V +IWDT Sbjct: 9 KSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDT 68 Query: 65 AGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLG 124 AGQER+ SL +YRGA ++VFDVT +F+ W E Q +P N + G Sbjct: 69 AGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNP----NMVMALAG 124 Query: 125 NKID-LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 NK D L+ R+V + AQ + +N + + ETSAK A NV++ F IAR Sbjct: 125 NKSDLLDARKVTAEDAQTYA-QENGLFFMETSAKTATNVKEIFYEIAR 171 >4LHX-A nrPDB Length = 186 Score = 125 bits (314), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 113/182 (62%), Gaps = 7/182 (3%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L K++++GDSGVGKT ++ ++ F++ + +TIG DF + + +D + + +QIWDTAGQ Sbjct: 10 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 69 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ERF+++ A+YRGA +LV+D+T +F + +W AS D E ++LGNK Sbjct: 70 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASA-DVEK---MILGNKC 125 Query: 128 DL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEF 186 D+ + RQV+ +R + I + ETSAK INVE AF T+AR+ +K + + +L Sbjct: 126 DVNDKRQVSKERGEKLALDY-GIKFMETSAKANINVENAFFTLARD-IKAKMDKKLEGNS 183 Query: 187 PE 188 P+ Sbjct: 184 PQ 185 >2EW1-A nrPDB Length = 201 Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 69/178 (38%), Positives = 110/178 (61%), Gaps = 6/178 (3%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L K++++G++GVGKT L+ ++ F ATIG DF+ K V ++ V +QIWDTAGQ Sbjct: 26 LFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 85 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ERF+S+ ++YR A+ +L +D+T +F+ L W E AS + V++GNKI Sbjct: 86 ERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNK----VITVLVGNKI 141 Query: 128 DL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYN 184 DL E R+V+ +RA+ + ++ ++ Y ETSAKE+ NVE+ F +A + + + L N Sbjct: 142 DLAERREVSQQRAEEFSEAQ-DMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVN 198 >1YZN-A nrPDB Length = 185 Score = 124 bits (312), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 62/164 (37%), Positives = 103/164 (62%), Gaps = 4/164 (2%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L K++++G+SGVGK+ L+ ++ + ++N Y +TIG DF K V +D + V +QIWDTAGQ Sbjct: 21 LFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 80 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ERF+++ ++YRG+ ++V+DVT +F + W E A+ + +++GNK Sbjct: 81 ERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLK----LLVGNKC 136 Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 DL++++V N +P+ ETSA ++ NVE AF T+AR Sbjct: 137 DLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMAR 180 >3TSO-A nrPDB Length = 178 Score = 124 bits (312), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 63/165 (38%), Positives = 104/165 (63%), Gaps = 6/165 (3%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 + KV+++G+SGVGKT+L++++ +FS+ + TIG +F T+ VM+ V QIWDTAG Sbjct: 10 VFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGL 69 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ER++++ A+YRGA +LVFD+T T+ ++ W E A +++GNK Sbjct: 70 ERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEA----TIVVMLVGNKS 125 Query: 128 DL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 DL + R+V T+ A+ + N + + ETSA ++ NVE AF+T+ + Sbjct: 126 DLSQAREVPTEEARMFA-ENNGLLFLETSALDSTNVELAFETVLK 169 >1X3S-A nrPDB Length = 195 Score = 124 bits (311), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 69/181 (38%), Positives = 106/181 (58%), Gaps = 4/181 (2%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 LK++I+G+SGVGK+SL+ ++ + F + ATIG DF K + VD + IWDTAGQE Sbjct: 16 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 75 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF++L ++YRGA +LV+DVT +TF LD+W +E + D N +++GNKID Sbjct: 76 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVN---MLVGNKID 132 Query: 129 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPE 188 ENR+V + K+++ + E SAK V+ AF+ + ++ E N+ Sbjct: 133 KENREVDRNEGLKFA-RKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNSG 191 Query: 189 P 189 P Sbjct: 192 P 192 >4RKE-A nrPDB Length = 176 Score = 124 bits (310), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 61/164 (37%), Positives = 99/164 (60%), Gaps = 4/164 (2%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L K II+GD+GVGK+ L+ Q+ +K+F + TIG +F + + +D + + +QIWDTAG Sbjct: 10 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGL 69 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 E F+S+ ++YRGA +LV+D+T TF L +W ++ A N +++GNK Sbjct: 70 EAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED----ARQHSNSNMVIMLIGNKS 125 Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 DL++R+ K ++ + + ETSA+ A NVE+AF A+ Sbjct: 126 DLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAK 169 >2BMD-A nrPDB Length = 186 Score = 123 bits (309), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 68/183 (37%), Positives = 107/183 (58%), Gaps = 6/183 (3%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M+ L K +++G++G GK+ L++Q++ KKF + TIG +F +K + V + V +Q Sbjct: 3 MSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQ 62 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 IWDTAGQERF+S+ ++YRGA +LV+D+T+ T+ L +W L A +N Sbjct: 63 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNW----LTDARMLASQNIVI 118 Query: 121 VVLGNKIDLE-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 ++ GNK DL+ +R+V A + +N + + ETSA NVE+AF AR L + Sbjct: 119 ILCGNKKDLDADREVTFLEASRFA-QENELMFLETSALTGENVEEAFVQCARKILNKIES 177 Query: 180 VEL 182 EL Sbjct: 178 GEL 180 >1Z22-A nrPDB Length = 168 Score = 123 bits (309), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 58/171 (33%), Positives = 100/171 (58%), Gaps = 5/171 (2%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65 +V +K++++G+ VGK+S++ +Y F+ YK TIG DFL +++ V+D V + +WDTA Sbjct: 3 EVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTA 62 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125 GQE F ++ A+YRGA CVLVF T +F+ + SWR++ + + + P ++ N Sbjct: 63 GQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVG-----DIPTALVQN 117 Query: 126 KIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 KIDL + + + ++ TS KE +NV + F+ +A L++ Sbjct: 118 KIDLLDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEKHLQK 168 >6O62-A nrPDB Length = 184 Score = 123 bits (308), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 67/176 (38%), Positives = 113/176 (64%), Gaps = 8/176 (4%) Query: 7 VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66 +++K++++GDSGVGK+ L+ ++V KF+ + TIG DF + + + + +Q+WDTAG Sbjct: 13 MIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAG 72 Query: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNK 126 QERF+++ A+YRGA VL++DVT +F+ +++W + + Q + D + F ++GNK Sbjct: 73 QERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWF-QTVTQHANEDAQIF---LVGNK 128 Query: 127 IDLE-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVE 181 D E NRQV+ ++ Q +K N+P+ E SAK NV+ F +A ++ QE VE Sbjct: 129 CDDEVNRQVSKEQGQELA-AKLNVPFLEASAKSNENVDSIFYELA--SIIQEKHVE 181 >3CPH-A nrPDB Length = 213 Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 62/164 (37%), Positives = 100/164 (60%), Gaps = 5/164 (3%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 ++K++++GDSGVGK+ L+ ++V KF+ + TIG DF K V ++ + V +Q+WDTAGQ Sbjct: 20 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 79 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ERF+++ A+YRGA +LV+DVT TF + W + + +++GNK Sbjct: 80 ERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW----FKTVNEHANDEAQLLLVGNKS 135 Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 D+E R V + +A + IP+ E+SAK NV + F T+A+ Sbjct: 136 DMETRVVTADQGEALA-KELGIPFIESSAKNDDNVNEIFFTLAK 178 >2OCY-C nrPDB Length = 170 Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 62/164 (37%), Positives = 100/164 (60%), Gaps = 5/164 (3%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 ++K++++GDSGVGK+ L+ ++V KF+ + TIG DF K V ++ + V +Q+WDTAGQ Sbjct: 3 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ 62 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ERF+++ A+YRGA +LV+DVT TF + W + + +++GNK Sbjct: 63 ERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW----FKTVNEHANDEAQLLLVGNKS 118 Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 D+E R V + +A + IP+ E+SAK NV + F T+A+ Sbjct: 119 DMETRVVTADQGEALA-KELGIPFIESSAKNDDNVNEIFFTLAK 161 >2F7S-A nrPDB Length = 217 Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 111/193 (57%), Gaps = 13/193 (6%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDR----------LV 57 L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V+ + + V Sbjct: 25 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 84 Query: 58 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPEN 117 +Q+WDTAGQERF+SL AF+R A +L+FD+T+ +F + +W + A +P+ Sbjct: 85 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 143 Query: 118 FPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177 V++GNK DL +++ +R K IPYFETSA NVE+A +T+ +K+ Sbjct: 144 --IVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 201 Query: 178 TEVELYNEFPEPI 190 + + P+ + Sbjct: 202 EQCVEKTQIPDTV 214 >2IEZ-A nrPDB Length = 220 Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 73/216 (33%), Positives = 119/216 (55%), Gaps = 22/216 (10%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDR----------LV 57 L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V+ D + V Sbjct: 11 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKV 70 Query: 58 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPEN 117 +Q+WDTAG ERF+SL AF+R A +L+FD+T+ +F + +W + A +P+ Sbjct: 71 HLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 129 Query: 118 FPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177 V++GNK DL +++ +R K IPYFETSA NVE++ +T+ +K+ Sbjct: 130 --IVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDLIMKRM 187 Query: 178 TEVELYNEFPEPI------KLDKNERAKASAESCSC 207 + + P+ + KLD K + + C+C Sbjct: 188 EKCVEKTQVPDTVNGGNSGKLDGE---KPAEKKCAC 220 >2GIL-A nrPDB Length = 162 Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 102/163 (62%), Gaps = 6/163 (3%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 K++ LG+ VGKTSL+ +++ F N Y+ATIG DFL+K + ++DR V +Q+WDTAGQE Sbjct: 2 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 61 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF+SL ++ R + V+V+D+T N+F+ W D+ + + +++GNK D Sbjct: 62 RFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGS----DVIIMLVGNKTD 117 Query: 129 L-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA 170 L + RQV+ + + + N+ + ETSAK NV+Q F+ +A Sbjct: 118 LADKRQVSIEEGERKA-KELNVMFIETSAKAGYNVKQLFRRVA 159 >1YVD-A nrPDB Length = 169 Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 67/164 (40%), Positives = 97/164 (59%), Gaps = 6/164 (3%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 LKV +LGD+GVGK+S++ ++V F TIGA F+TK V + L IWDTAGQE Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF++L +YRG+ ++V+D+T TF TL +W E P + + GNK D Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVREL----RQHGPPSIVVAIAGNKCD 121 Query: 129 LEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 L + R+V + A+ + S + I + ETSAK AIN+ + F I+R Sbjct: 122 LTDVREVMERDAKDYADSIHAI-FVETSAKNAININELFIEISR 164 >2O52-A nrPDB Length = 200 Score = 120 bits (302), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/175 (37%), Positives = 101/175 (57%), Gaps = 4/175 (2%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L K +++G +G GK+ L++Q++ KF TIG +F ++ V V + V +QIWDTAGQ Sbjct: 25 LFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQ 84 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ERF+S+ ++YRGA +LV+D+T+ T+ +L +W + ASP N ++ GNK Sbjct: 85 ERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASP----NIVVILCGNKK 140 Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVEL 182 DL+ + T + +N + + ETSA NVE+AF AR L + EL Sbjct: 141 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGEL 195 >5LEF-A nrPDB Length = 191 Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 68/187 (36%), Positives = 110/187 (58%), Gaps = 6/187 (3%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 K++ LG+ VGKTSL+ +++ F N Y+ATIG DFL+K + ++DR V +Q+WDTAG E Sbjct: 10 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGLE 69 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF+SL ++ R + V+V+D+T N+F+ W D+ + + +++GNK D Sbjct: 70 RFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGS----DVIIMLVGNKTD 125 Query: 129 L-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFP 187 L + RQV+ + + + N+ + ETSAK NV+Q F+ +A E+ + E Sbjct: 126 LADKRQVSIEEGERKA-KELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDM 184 Query: 188 EPIKLDK 194 IKL+K Sbjct: 185 IDIKLEK 191 >2FFQ-A nrPDB Length = 171 Score = 120 bits (300), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 6/168 (3%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 K++ LG+ VGKTSL+ +++ F N Y+ATIG DFL+K + ++DR V +Q+WDTAGQE Sbjct: 3 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 62 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF+SL ++ R + V+V+D+T N+F+ W D+ + +++GNK D Sbjct: 63 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDD----VRTERGSDVIIMLVGNKTD 118 Query: 129 L-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 L + RQ+ + + + ++ + ETSAK NV+Q F+ +A L+ Sbjct: 119 LADKRQITIEEGEQRA-KELSVMFIETSAKTGYNVKQLFRRVASALLE 165 >2IEY-A nrPDB Length = 195 Score = 120 bits (300), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 65/172 (37%), Positives = 102/172 (59%), Gaps = 13/172 (7%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDR----------LV 57 L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V+ D + V Sbjct: 11 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKV 70 Query: 58 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPEN 117 +Q+WDTAG ERF+SL AF+R A +L+FD+T+ +F + +W + A +P+ Sbjct: 71 HLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 129 Query: 118 FPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169 V++GNK DL +++ +R K IPYFETSA NVE++ +T+ Sbjct: 130 --IVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETL 179 >5YOZ-A nrPDB Length = 177 Score = 120 bits (300), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 96/162 (59%), Gaps = 5/162 (3%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K+++LG+SG GK+S+ ++ +F + TIGA FL+K VM+D R + +IWDTAG ER Sbjct: 17 KIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDTAGLER 76 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 F+SL +YRGA ++V+D+T + K +W E A P + V++GNK DL Sbjct: 77 FRSLAPIYYRGASGALVVYDITNSESLKKAQTWIKELRANADP----SLIIVLVGNKKDL 132 Query: 130 EN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA 170 + RQV+ + Q + ++E SAK+ NVEQ F +A Sbjct: 133 GSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLA 174 >4RKF-A nrPDB Length = 190 Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 57/162 (35%), Positives = 101/162 (62%), Gaps = 4/162 (2%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 + K++I+G+S VGKTS + +Y + F++ + +T+G DF K V D+ V +QIWDTAG Sbjct: 23 MFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGL 82 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ER++++ A+YRGA +L++DVT ++F ++ W + Q +N +++GNK Sbjct: 83 ERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDW----VTQIKTYSWDNAQVILVGNKC 138 Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169 D+E+++V + + + +FETSAKE +NV+ F+ + Sbjct: 139 DMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERL 180 >2IL1-A nrPDB Length = 192 Score = 118 bits (296), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 63/169 (37%), Positives = 99/169 (58%), Gaps = 5/169 (2%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 L+VII+G GVGKTSLM ++ + F K+T+G DF K V + + + +QIWDTAGQE Sbjct: 27 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 86 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF S+ A+YR A +LV+D+T TF L W AS E+ +++GNK+D Sbjct: 87 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYAS----EDAELLLVGNKLD 142 Query: 129 LE-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 E +R++ ++ + + + + E SAK+ NV++ F + + LK+ Sbjct: 143 CETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKK 191 >3BC1-A nrPDB Length = 195 Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 63/172 (36%), Positives = 98/172 (56%), Gaps = 13/172 (7%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD----------DRLV 57 L+K + LGDSGVGKTS++ QY + KF++++ T+G DF K V+ + + Sbjct: 11 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRI 70 Query: 58 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPEN 117 +Q+WDTAG ERF+SL AF+R A +L+FD+T +F + +W + + A +P+ Sbjct: 71 HLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYSENPD- 129 Query: 118 FPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169 V+ GNK DLE+++ + K IPYFETSA N+ A + + Sbjct: 130 --IVLCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGTNISHAIEML 179 >1Z0F-A nrPDB Length = 179 Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 98/165 (59%), Gaps = 6/165 (3%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 + K II+GD GVGK+ L++Q+ KKF TIG +F T+ + V + + +QIWDTAGQ Sbjct: 15 IFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQ 74 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ERF+++ ++YRGA ++V+D+T +T+ L SW L A N +++GNK Sbjct: 75 ERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSW----LTDARNLTNPNTVIILIGNKA 130 Query: 128 DLE-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 DLE R V + A+ + +N + + E SAK NVE AF A+ Sbjct: 131 DLEAQRDVTYEEAKQFA-EENGLLFLEASAKTGENVEDAFLEAAK 174 >6IF2-B nrPDB Length = 186 Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 62/168 (36%), Positives = 96/168 (57%), Gaps = 5/168 (2%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L K++I+GDSGVGK+SL+ ++ + FS Y TIG DF + V ++ V +QIWDTAG Sbjct: 14 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGL 73 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ERF+++ +YRG ++V+DVT+ +F + W E ++ ++ +++GNK Sbjct: 74 ERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-----NQNCDDVCRILVGNKN 128 Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 D R+V + I FETSAKE +NVE+ F I L+ Sbjct: 129 DDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLR 176 >5UB8-A nrPDB Length = 222 Score = 117 bits (294), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 59/178 (33%), Positives = 112/178 (62%), Gaps = 6/178 (3%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L K++++GDSGVGK++L++++ +F+ + ++TIG +F T+ + +D + V QIWDTAGQ Sbjct: 15 LYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQ 74 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ER++++ A+YRGA ++V+D+ +++++ W E A N ++GNK Sbjct: 75 ERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADA----NIIIELVGNKS 130 Query: 128 DLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYN 184 DL++ R V T+ A+ + +NN+ + E SA + NV+ +F + +N + ++ +L N Sbjct: 131 DLDHLRAVPTEEAKNFAM-ENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLEN 187 >3RAB-A nrPDB Length = 169 Score = 117 bits (293), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 55/163 (33%), Positives = 96/163 (58%), Gaps = 4/163 (2%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 + K++I+G+S VGKTS + +Y + F+ + +T+G DF K + +D+ + +QIWDTAGQ Sbjct: 5 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQ 64 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ER++++ A+YRGA +L++D+T +F + W Q +N +++GNK Sbjct: 65 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWS----TQIKTYSWDNAQVLLVGNKC 120 Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA 170 D+E+ +V + +FE SAK+ INV+Q F+ + Sbjct: 121 DMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV 163 >4CZ2-A nrPDB Length = 230 Score = 117 bits (293), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 115/205 (56%), Gaps = 5/205 (2%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDR-LVTMQIWD 63 ++ L KV+++G+ GVGKTS++ +YV++ FS Y+ATIG DF K + D R LV +Q+WD Sbjct: 27 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 86 Query: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123 AG ERF ++ +Y+ A +VFD++ +TF+ + W+ + + + P V+L Sbjct: 87 IAGLERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 146 Query: 124 GNKIDLENRQVATKRAQA--WCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVE 181 NK D +N+ + +Q +C +FETSAK+ IN+E+A + + L Sbjct: 147 ANKCD-QNKDSSMSPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKMLVNHQSFP 205 Query: 182 LYNEFPEPIKLDKNE-RAKASAESC 205 + IKLD+ RA+ ++ C Sbjct: 206 NEENDVDKIKLDQETLRAENKSQCC 230 >2G6B-A nrPDB Length = 180 Score = 117 bits (292), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 61/166 (36%), Positives = 98/166 (59%), Gaps = 5/166 (3%) Query: 7 VLLKVIILGDSGVGKTSLMNQYVNKKF-SNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65 V KV+++GDSGVGKT L+ ++ + F + + +T+G DF K + VD V +Q+WDTA Sbjct: 9 VAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTA 68 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125 GQERF+S+ A+YR A +L++DVT +F + +W L + + ++LGN Sbjct: 69 GQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAW----LTEIHEYAQHDVALMLLGN 124 Query: 126 KIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 K+D + +V + + +P+ ETSAK +NV+ AF IA+ Sbjct: 125 KVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAK 170 >1EK0-A nrPDB Length = 170 Score = 116 bits (290), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 63/166 (37%), Positives = 97/166 (58%), Gaps = 9/166 (5%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +K+++LG++ VGK+S++ ++V+ F+ + TIGA FLT+ V +++ V +IWDTAGQE Sbjct: 4 IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQE 63 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF SL +YR A ++V+DVT P +F W E QAS ++ ++GNKID Sbjct: 64 RFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQAS----KDIIIALVGNKID 119 Query: 129 L----ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA 170 + R+VA + + K + +FETSAK NV F I Sbjct: 120 MLQEGGERKVAREEGEKLAEEK-GLLFFETSAKTGENVNDVFLGIG 164 >3CPJ-B nrPDB Length = 223 Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 55/164 (33%), Positives = 107/164 (65%), Gaps = 6/164 (3%) Query: 7 VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66 +L K++++GDSGVGK++L++++ +F+ K+TIG +F T+ + ++ + + QIWDTAG Sbjct: 12 LLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTAG 71 Query: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNK 126 QER++++ A+YRGA ++V+D++ ++++ + W E A +N ++GNK Sbjct: 72 QERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENAD----DNVAVGLIGNK 127 Query: 127 IDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169 DL + R V T+ ++ + +N + + ETSA + NV++AF+ + Sbjct: 128 SDLAHLRAVPTEESKTFA-QENQLLFTETSALNSENVDKAFEEL 170 >3DZ8-A nrPDB Length = 191 Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 57/162 (35%), Positives = 94/162 (58%), Gaps = 4/162 (2%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 + K++I+G+S VGKTS + +Y + F+ + +T+G DF K V ++ V +QIWDTAGQ Sbjct: 23 MFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQ 82 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ER++++ A+YRGA +L++D+T +F + W Q +N +++GNK Sbjct: 83 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDW----ATQIKTYSWDNAQVILVGNKC 138 Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169 D+E +V + +FE SAKE I+V QAF+ + Sbjct: 139 DMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERL 180 >6FF8-A nrPDB Length = 181 Score = 114 bits (286), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/177 (36%), Positives = 105/177 (59%), Gaps = 5/177 (2%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDR-LVTM 59 M +R+ L KV+++G+ GVGKTS++ +YV++ FS Y+ATIG DF K + D R LV + Sbjct: 2 METREH-LFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 60 Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119 Q+WD AG ERF ++ +Y+ A +VFD++ +TF+ + W+ + + + P Sbjct: 61 QLWDIAGLERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 120 Query: 120 FVVLGNKIDLENRQVATKRAQA--WCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 V+L NK D +N+ + +Q +C +FETSAK+ IN+E+A + + L Sbjct: 121 AVLLANKCD-QNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 176 >1ZBD-A nrPDB Length = 203 Score = 114 bits (284), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 95/162 (58%), Gaps = 4/162 (2%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 + K++I+G+S VGKTS + +Y + F+ + +T+G DF K + +D+ + +QIWDTAG Sbjct: 8 MFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGL 67 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ER++++ A+YRGA +L++D+T +F + W Q +N +++GNK Sbjct: 68 ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWS----TQIKTYSWDNAQVLLVGNKC 123 Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169 D+E+ +V + +FE SAK+ INV+Q F+ + Sbjct: 124 DMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERL 165 >1YZU-A nrPDB Length = 170 Score = 113 bits (283), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 58/168 (34%), Positives = 101/168 (60%), Gaps = 6/168 (3%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 KV++LG+ VGKTSL+ +Y KF++++ T+ A FLTK++ + + V + IWDTAGQE Sbjct: 7 FKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQE 66 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF +LG +YR ++ +LV+D+T ++F+ + +W E ++GNKID Sbjct: 67 RFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKEL----RKMLGNEICLCIVGNKID 122 Query: 129 LEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 LE R V+ + A+++ S ++ TSAK+ +E+ F + + ++ Sbjct: 123 LEKERHVSIQEAESYAESV-GAKHYHTSAKQNKGIEELFLDLCKRMIE 169 >2GF9-A nrPDB Length = 189 Score = 112 bits (281), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 56/162 (34%), Positives = 93/162 (57%), Gaps = 4/162 (2%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 + K++++G+S VGKTS + +Y + F+ + +T+G DF K V D+ + +QIWDTAGQ Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQ 81 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ER++++ A+YRGA +L++D+ +F + W Q +N +++GNK Sbjct: 82 ERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDW----ATQIKTYSWDNAQVILVGNKC 137 Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169 DLE+ +V +FE SAKE INV+Q F+ + Sbjct: 138 DLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERL 179 >2HUP-A nrPDB Length = 201 Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 59/164 (35%), Positives = 101/164 (61%), Gaps = 5/164 (3%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L K++++GD+ VGKT ++ ++ FS + +TIG DF K + + + V +QIWDTAGQ Sbjct: 29 LFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQ 88 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ERF+++ ++YR A+ +L +D+T ++F ++ W ++ A N +++GNK Sbjct: 89 ERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGS----NIVQLLIGNKS 144 Query: 128 DL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA 170 DL E R+V+ AQ+ + + ETSAK++ NVE+AF +A Sbjct: 145 DLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVA 188 >3RWM-B nrPDB Length = 185 Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 56/163 (34%), Positives = 106/163 (65%), Gaps = 6/163 (3%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L K++++GDSGVGK++L++++ +F+ + K+TIG +F T+ + V+++ + QIWDTAG Sbjct: 10 LFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGL 69 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ER++++ A+YRGA ++V+D++ ++++ + W E A +N ++GNK Sbjct: 70 ERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENA----DDNVAVGLIGNKS 125 Query: 128 DLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169 DL + R V T A+ + +N + + ETSA + NV++AF+ + Sbjct: 126 DLAHLRAVPTDEAKNFAM-ENQMLFTETSALNSDNVDKAFREL 167 >2N1B-A nrPDB Length = 261 Score = 110 bits (274), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 96/169 (56%), Gaps = 7/169 (4%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65 +V K++++GD G GKT+ + +++ +F +Y AT+G + + + +WDTA Sbjct: 49 QVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTA 108 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125 GQE+F L +Y A C +++FDVT+ T+K + +W + + R EN P V+ GN Sbjct: 109 GQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLV-----RVCENIPIVLCGN 163 Query: 126 KIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 K+D+++R+V K + K N+ Y++ SAK N E+ F +AR + Sbjct: 164 KVDIKDRKVKAK--SIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLI 210 >5UWI-A nrPDB Length = 237 Score = 110 bits (274), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 96/169 (56%), Gaps = 7/169 (4%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65 +V K++++GD G GKT+ + +++ +F +Y AT+G + + + +WDTA Sbjct: 29 QVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTA 88 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125 GQE+F L +Y A C +++FDVT+ T+K + +W + + R EN P V+ GN Sbjct: 89 GQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLV-----RVCENIPIVLCGN 143 Query: 126 KIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 K+D+++R+V K + K N+ Y++ SAK N E+ F +AR + Sbjct: 144 KVDIKDRKVKAK--SIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLI 190 >5CLL-A nrPDB Length = 191 Score = 110 bits (274), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 96/169 (56%), Gaps = 7/169 (4%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65 +V K++++GD G GKT+ + +++ +F +Y AT+G + + + +WDTA Sbjct: 8 QVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTA 67 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125 GQE+F L +Y A C +++FDVT+ T+K + +W + + R EN P V+ GN Sbjct: 68 GQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLV-----RVCENIPIVLCGN 122 Query: 126 KIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 K+D+++R+V K + K N+ Y++ SAK N E+ F +AR + Sbjct: 123 KVDIKDRKVKAKSIV--FHRKKNLQYYDISAKSNYNFEKPFLWLARKLI 169 >2G77-B nrPDB Length = 198 Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 64/169 (37%), Positives = 99/169 (58%), Gaps = 9/169 (5%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 + K+I++GDS VGKT L ++ +F ++ +ATIG DF + V +D + +Q+WDTAGQ Sbjct: 29 IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQ 88 Query: 68 ERF-QSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNK 126 ERF +S+ +YR V V+D+T +F +L +W +E D P +++GNK Sbjct: 89 ERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLAND---IPRILVGNK 145 Query: 127 IDLENR-QVATKRAQAWCYSKNNIPYFETSAK---EAINVEQAFQTIAR 171 DL + QV T AQ + +++P FETSAK + +VE F T+A Sbjct: 146 CDLRSAIQVPTDLAQKFA-DTHSMPLFETSAKNPNDNDHVEAIFMTLAH 193 >1Z06-A nrPDB Length = 189 Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 66/174 (37%), Positives = 102/174 (58%), Gaps = 10/174 (5%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 62 SR ++ K+I++GDS VGKT L ++ +F ++ +ATIG DF + V +D + +Q+W Sbjct: 16 SRSRIF-KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLW 74 Query: 63 DTAGQERF-QSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121 DTAGQERF +S+ +YR V V+D+T +F +L +W +E D P + Sbjct: 75 DTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLAND---IPRI 131 Query: 122 VLGNKIDLENR-QVATKRAQAWCYSKNNIPYFETSAK---EAINVEQAFQTIAR 171 ++GNK DL + QV T AQ + +++P FETSAK + +VE F T+A Sbjct: 132 LVGNKCDLRSAIQVPTDLAQKFA-DTHSMPLFETSAKNPNDNDHVEAIFMTLAH 184 >5XOJ-A nrPDB Length = 182 Score = 107 bits (266), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 91/163 (55%), Gaps = 7/163 (4%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 K++++GD G GKT+ + +++ +F +Y ATIG + + + +WDTAG E Sbjct: 13 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGLE 72 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 +F L +Y A C +++FDVT+ T+K + +W + + R EN P V+ GNK+D Sbjct: 73 KFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLV-----RVCENIPIVLCGNKVD 127 Query: 129 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 ++ R+V K + K N+ Y++ SAK N E+ F +AR Sbjct: 128 VKERKVKAKTIT--FHRKKNLQYYDISAKSNYNFEKPFLWLAR 168 >3WYF-A nrPDB Length = 219 Score = 106 bits (265), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 91/163 (55%), Gaps = 7/163 (4%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 K++++GD G GKT+ + +++ +F +Y ATIG + + + +WDTAG E Sbjct: 13 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGLE 72 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 +F L +Y A C +++FDVT+ T+K + +W + + R EN P V+ GNK+D Sbjct: 73 KFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLV-----RVCENIPIVLCGNKVD 127 Query: 129 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 ++ R+V K + K N+ Y++ SAK N E+ F +AR Sbjct: 128 VKERKVKAKTIT--FHRKKNLQYYDISAKSNYNFEKPFLWLAR 168 >4DJT-A nrPDB Length = 218 Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 65/171 (38%), Positives = 95/171 (55%), Gaps = 9/171 (5%) Query: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV-MVDDR--LVTMQ 60 R+++ K+ ++GD GVGKT+ +N+ ++ +F Y AT+GA + V +DD+ ++ Sbjct: 7 RRELTYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGA--VNHPVTFLDDQGNVIKFN 64 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 +WDTAGQE+ L +Y GA +L FDVT+ T + L W EF QA + P Sbjct: 65 VWDTAGQEKKAVLKDVYYIGASGAILFFDVTSRITCQNLARWVKEF--QAVVGNEA--PI 120 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 VV NKID++NRQ +K+ N YFE SAK A N F +AR Sbjct: 121 VVCANKIDIKNRQKISKKLVMEVLKGKNYEYFEISAKTAHNFGLPFLHLAR 171 >1D5C-A nrPDB Length = 162 Score = 103 bits (257), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 93/161 (57%), Gaps = 4/161 (2%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K++ LG+ VGKTS++ +++ F N Y++TIG DFL+K + +D+ V +Q+WDTAGQER Sbjct: 3 KLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQER 62 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 F+SL ++ R + ++V+D+T +F+ W + L + ++ ++GNK DL Sbjct: 63 FRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERG----KDVIIALVGNKTDL 118 Query: 130 ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA 170 + + T + N + ETSAK N++ F+ A Sbjct: 119 GDLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKTA 159 >2P5S-A nrPDB Length = 199 Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 16/176 (9%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K+++ GD+ VGK+S + + +F AT+G DF K ++VD +Q+WDTAGQER Sbjct: 30 KIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQER 89 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 F+S+ +++R AD +L++DVT +F + W D +I+ + E P +++GNK D+ Sbjct: 90 FRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVD--MIEDAAH--ETVPIMLVGNKADI 145 Query: 130 ENRQVATKRAQAWCYSKN---------NIPYFETSAKEAINVEQAFQTIARNALKQ 176 R A Q C + + ETSAK+ N+ +A +AR K+ Sbjct: 146 --RDTAATEGQK-CVPGHFGEKLAMTYGALFCETSAKDGSNIVEAVLHLAREVKKR 198 >4FMC-F nrPDB Length = 117 Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 77/119 (64%), Gaps = 4/119 (3%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERF 70 ++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + + +D + + +QIWDTAGQERF Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 60 Query: 71 QSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 +++ ++YRGA ++V+DVT +F + W E AS EN +++GNK DL Sbjct: 61 RTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAS----ENVNKLLVGNKCDL 115 >4M8N-E nrPDB Length = 199 Score = 99.0 bits (245), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 57/163 (34%), Positives = 91/163 (55%), Gaps = 5/163 (3%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K+++LG GVGK++L Q+V F +Y TI D K+V VD + ++I DTAG E+ Sbjct: 8 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDAQQCMLEILDTAGTEQ 66 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 F ++ + + LV+ +TA +TF L R++ L +D ++ P +++GNK DL Sbjct: 67 FTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQIL---RVKDTDDVPMILVGNKCDL 123 Query: 130 ENRQVATK-RAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 E+ +V K + Q NN + E+SAK INV + F + R Sbjct: 124 EDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVR 166 >4DXA-A nrPDB Length = 169 Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/163 (34%), Positives = 91/163 (55%), Gaps = 5/163 (3%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K+++LG GVGK++L Q+V F +Y TI D K+V VD + ++I DTAG E+ Sbjct: 7 KLVVLGSVGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDAQQCMLEILDTAGTEQ 65 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 F ++ + + LV+ +TA +TF L R++ L +D ++ P +++GNK DL Sbjct: 66 FTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQIL---RVKDTDDVPMILVGNKCDL 122 Query: 130 ENRQVATK-RAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 E+ +V K + Q NN + E+SAK INV + F + R Sbjct: 123 EDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVR 165 >5CM8-B nrPDB Length = 203 Score = 97.4 bits (241), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 61/177 (34%), Positives = 100/177 (56%), Gaps = 14/177 (7%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L KVI++G GVGK++L Q++ +F Y+ T AD K+V++D V + I DTAGQ Sbjct: 13 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGQ 71 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 E + ++ ++R + + VF +T +F+ +R++ L ++ E+ PF+++GNK Sbjct: 72 EDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQIL---RVKNDESIPFLLVGNKC 128 Query: 128 DL-ENRQVATK----RAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 DL + R+V RAQ W +PY ETSAK NV++ F + R ++TE Sbjct: 129 DLNDKRKVPLSECQLRAQQWA-----VPYVETSAKTRENVDKVFFDLMREIRSRKTE 180 >1ZC4-A nrPDB Length = 175 Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 61/169 (36%), Positives = 96/169 (56%), Gaps = 14/169 (8%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L KVI++G GVGK++L Q++ +F Y+ T AD K+V++D V + I DTAG Sbjct: 6 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGL 64 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 E + ++ ++R + + VF +T +F +R++ L ++ EN PF+++GNK Sbjct: 65 EDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQIL---RVKEDENVPFLLVGNKS 121 Query: 128 DLEN-RQV----ATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 DLE+ RQV A RA+ W N+ Y ETSAK NV++ F + R Sbjct: 122 DLEDKRQVSVEEAKNRAEQW-----NVNYVETSAKTRANVDKVFFDLMR 165 >3E5H-A nrPDB Length = 178 Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/169 (34%), Positives = 88/169 (52%), Gaps = 6/169 (3%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRL-VTMQIWDTAGQ 67 LK+++LGD GKTSL + + F QYK TIG DF + + + L VT+QIWD GQ Sbjct: 7 LKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQ 66 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL-GNK 126 + + GA +LV+D+T +F+ L+ W +++ + E P V L GNK Sbjct: 67 TIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYT--VVKKVSEESETQPLVALVGNK 124 Query: 127 IDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 IDLE+ R + ++ +C +F SAK +V FQ +A L Sbjct: 125 IDLEHMRTIKPEKHLRFCQENGFSSHF-VSAKTGDSVFLCFQKVAAEIL 172 >5WDR-A nrPDB Length = 171 Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 6/156 (3%) Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG 80 K++L Q + + F +Y TI D K V +DD + I DTAGQE + ++ + R Sbjct: 20 KSALTIQLIQQHFVTEYDPTI-EDSYRKHVSIDDEACLLDILDTAGQEDYSAMRDQYMRT 78 Query: 81 ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLE-NRQVATKRA 139 + + V+ + + + + S+R++ L +D + P +++GNK DLE +R+V+T+ Sbjct: 79 GEGFLCVYSIDSQQSLDEIHSFREQIL---RVKDQDEVPMILVGNKCDLEEHREVSTEAG 135 Query: 140 QAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 QA S +IP+ ETSAK+ INVE+AF + R K Sbjct: 136 QAVAKS-YSIPFMETSAKKRINVEEAFYQLVREIRK 170 >5XC3-A nrPDB Length = 176 Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 56/161 (34%), Positives = 95/161 (59%), Gaps = 10/161 (6%) Query: 10 KVIILGDSGVGKTSLMNQYV-NKKFSNQYKATIGADFLTKEVMV-DDRLVTMQIWDTAGQ 67 K+I++G SGVGK+S+++Q++ N+K SN TIGA F +K+V+ + + + + IWDTAGQ Sbjct: 7 KIILIGSSGVGKSSIVHQFLFNRKISN-VSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQ 65 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ERF+S+ +Y + C++VFDVT +F + W ++ I + +V+ NKI Sbjct: 66 ERFRSITKMYYTNSLGCLVVFDVTDRESFDDVYYWINDLRINCHT----TYYILVVANKI 121 Query: 128 DLE--NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAF 166 D++ N +V+ + +C N+ Y S+ E+ V F Sbjct: 122 DIDKNNWRVSENEIKKFC-RDNDCDYVFASSFESDTVNNLF 161 >2KE5-A nrPDB Length = 174 Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 13/169 (7%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L KVI++G GVGK++L Q++ +F Y+ T AD K+V++D V + I DTAG Sbjct: 3 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGL 61 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 E + ++ ++R + +LVF +T +F +R++ L + D P +V+GNK Sbjct: 62 EDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEED--KIPLLVVGNKS 119 Query: 128 DLENR-----QVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 DLE R + A +A+ W + Y ETSAK NV++ F + R Sbjct: 120 DLEERRQVPVEEARSKAEEW-----GVQYVETSAKTRANVDKVFFDLMR 163 >2ERY-A nrPDB Length = 172 Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 4/151 (2%) Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG 80 K++L Q++ F Y TI D TK+ ++DDR + I DTAGQE F ++ + R Sbjct: 18 KSALTIQFIQSYFVTDYDPTI-EDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRT 76 Query: 81 ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQ 140 + +LVF VT +F+ + ++ + L +D + FP +++GNK DL++++ T+ Sbjct: 77 GEGFLLVFSVTDRGSFEEIYKFQRQIL---RVKDRDEFPMILIGNKADLDHQRQVTQEEG 133 Query: 141 AWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 + + Y E SAK +NV+QAF + R Sbjct: 134 QQLARQLKVTYMEASAKIRMNVDQAFHELVR 164 >4KU4-A nrPDB Length = 206 Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 16/190 (8%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65 K+ K+ +LG+ GVGKTSL FS Y T+ D ++ ++D ++I DTA Sbjct: 12 KITDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTL-EDSYRRQCVIDGIPSHLEILDTA 70 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSW----------RDEFLIQASPRDP 115 GQE + +L + R + V+VFDVT ++F+ + DE R P Sbjct: 71 GQEEYGALREQWIRQNELFVIVFDVTRRSSFEAAERLFEEVIQTKRKLDETRRHPGDRHP 130 Query: 116 ENFPF-----VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA 170 ++ PF V++GNK DL+ R+ + K + ETSAK NVE+AF ++ Sbjct: 131 DDLPFAPSLVVLVGNKCDLDTRREVGTLEGSSLAKKLGCGFVETSAKLGTNVEEAFFSVV 190 Query: 171 RNALKQETEV 180 R +++ EV Sbjct: 191 RADRRRKREV 200 >3CLV-A nrPDB Length = 208 Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 44/208 (21%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDR--------- 55 KK K ++LG+S VGK+S++ + F TIGA F T V ++D Sbjct: 4 KKSSYKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNNE 63 Query: 56 --------------LVTMQ--------------IWDTAGQERFQSLGVAFYRGADCCVLV 87 ++T Q IWDTAGQER+ S+ +YRGA C ++V Sbjct: 64 KNNNINSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCAIVV 123 Query: 88 FDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKN 147 FD++ NT +W ++ I + N+ +++ NKID QV Q + N Sbjct: 124 FDISNSNTLDRAKTWVNQLKISS------NYIIILVANKIDKNKFQVDILEVQKYA-QDN 176 Query: 148 NIPYFETSAKEAINVEQAFQTIARNALK 175 N+ + +TSAK N++ F +A K Sbjct: 177 NLLFIQTSAKTGTNIKNIFYMLAEEIYK 204 >2J1L-A nrPDB Length = 214 Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 83/180 (46%), Gaps = 20/180 (11%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +KV+++GD G GKTSL+ + + F Y T+ ++ + V + V + IWDTAGQ+ Sbjct: 35 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQD 93 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKI 127 + L FY A +L FDVT+PN+F + + W E + P +V+G K Sbjct: 94 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-----KKVPIIVVGCKT 148 Query: 128 DLENRQ-------------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 DL + V R Q S + Y E SA+ NV FQ A AL Sbjct: 149 DLRKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 208 >3PIR-A nrPDB Length = 183 Score = 86.7 bits (213), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 49/152 (32%), Positives = 84/152 (55%), Gaps = 5/152 (3%) Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG 80 K++L Q+ K F +Y TI +L K +D++ + + DTAGQE F ++ + R Sbjct: 31 KSALTIQFFQKIFVPEYDPTIEDSYL-KHTEIDNQWAILDVLDTAGQEEFSAMREQYMRT 89 Query: 81 ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQ 140 D ++V+ VT +F+ +D + L +D E+FP +++ NK+DL + + T+ Sbjct: 90 GDGFLIVYSVTDKASFEHVDRFHQLIL---RVKDRESFPMILVANKVDLMHLRKVTRDQG 146 Query: 141 AWCYSKNNIPYFETSAKE-AINVEQAFQTIAR 171 +K NIPY ETSAK+ +NV++ F + R Sbjct: 147 KEMATKYNIPYIETSAKDPPLNVDKTFHDLVR 178 >4WA7-A nrPDB Length = 170 Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 51/157 (32%), Positives = 83/157 (52%), Gaps = 5/157 (3%) Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG 80 K++L Q + F ++Y TI D K+V++D + I DTAG E + ++ + R Sbjct: 17 KSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGLEEYSAMRDQYMRT 75 Query: 81 ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQ 140 + + VF + +F+ + +R++ +D E+ P V++GNK DL +R V TK+AQ Sbjct: 76 GEGFLCVFAINNTKSFEDIHHYREQI---KRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQ 132 Query: 141 AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177 S IP+ ETSAK V+ AF T+ R K + Sbjct: 133 DLARS-YGIPFIETSAKTRQGVDDAFYTLVREIRKHK 168 >3CON-A nrPDB Length = 190 Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 5/151 (3%) Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG 80 K++L Q + F ++Y TI D K+V++D + I DTAGQE + ++ + R Sbjct: 34 KSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 92 Query: 81 ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQ 140 + + VF + +F ++ +R++ +D ++ P V++GNK DL R V TK+A Sbjct: 93 GEGFLCVFAINNSKSFADINLYREQI---KRVKDSDDVPMVLVGNKCDLPTRTVDTKQAH 149 Query: 141 AWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 S IP+ ETSAK VE AF T+ R Sbjct: 150 ELAKSY-GIPFIETSAKTRQGVEDAFYTLVR 179 >5UHV-A nrPDB Length = 166 Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 5/151 (3%) Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG 80 K++L Q + F ++Y TI D K+V++D + I DTAGQE + ++ + R Sbjct: 16 KSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 74 Query: 81 ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQ 140 + + VF + +F ++ +R++ +D ++ P V++GNK DL R V TK+A Sbjct: 75 GEGFLCVFAINNSKSFADINLYREQI---KRVKDSDDVPMVLVGNKCDLPTRTVDTKQAH 131 Query: 141 AWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 S IP+ ETSAK VE AF T+ R Sbjct: 132 ELAKS-YGIPFIETSAKTRQGVEDAFYTLVR 161 >2J0V-A nrPDB Length = 212 Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 22/210 (10%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 +K + +GD VGKT ++ Y + KF Y T+ +F + V VD ++V + +WDTAGQ Sbjct: 9 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAVDGQIVNLGLWDTAGQ 67 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFK-TLDSWRDEFLIQASPRDPENFPFVVLGNK 126 E + L YRGAD VL F + + +++ L W E R N P V++G K Sbjct: 68 EDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELR-----RFAPNVPIVLVGTK 122 Query: 127 IDLENRQ---------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177 +DL + + + + + + Y E S+K NV+ F T + L+ Sbjct: 123 LDLRDDKGYLADHTNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPP 182 Query: 178 TEVELYNEFPEPIKLDKNERAKASAESCSC 207 E+ P + + R+ S S C Sbjct: 183 RRKEV------PRRRKNHRRSGCSIASIVC 206 >5WDQ-A nrPDB Length = 170 Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 5/151 (3%) Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG 80 K++L Q + F ++Y TI D K+V++D + I DTAGQE + ++ + R Sbjct: 20 KSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 78 Query: 81 ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQ 140 + + VF + +F+ + +R++ +D ++ P V++GNK D R V +++AQ Sbjct: 79 GEGFLCVFAINNTKSFEDIHQYREQI---KRVKDSDDVPMVLVGNKCDAAARTVESRQAQ 135 Query: 141 AWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 S IPY ETSAK VE AF T+ R Sbjct: 136 DLARS-YGIPYIETSAKTRQGVEDAFYTLVR 165 >2FN4-A nrPDB Length = 181 Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 57/163 (34%), Positives = 89/163 (54%), Gaps = 7/163 (4%) Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG 80 K++L Q++ F + Y TI D TK VD + I DTAGQE F ++ + R Sbjct: 22 KSALTIQFIQSYFVSDYDPTI-EDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRA 80 Query: 81 ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLEN-RQVATKRA 139 +LVF + +F + + L +D ++FP V++GNK DLE+ RQV A Sbjct: 81 GHGFLLVFAINDRQSFNEVGKLFTQIL---RVKDRDDFPVVLVGNKADLESQRQVPRSEA 137 Query: 140 QAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVEL 182 A+ S +++ YFE SAK +NV++AF+ + R A+++ E EL Sbjct: 138 SAFGAS-HHVAYFEASAKLRLNVDEAFEQLVR-AVRKYQEQEL 178 >2WBL-C nrPDB Length = 180 Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 18/180 (10%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 +K + +GD VGKT ++ Y F Y T+ +F + V+VD V + +WDTAGQ Sbjct: 6 FIKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLD-SWRDEFLIQASPRDPENFPFVVLGNK 126 E + L YRGAD +L F + + +++ + W E L +P P V++G K Sbjct: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPE-LKHYAP----GIPIVLVGTK 119 Query: 127 IDLENRQ-----------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 +DL + + + T + + + Y E S+K NV+ F T R AL+ Sbjct: 120 LDLRDDKQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVALR 179 >4KLZ-A nrPDB Length = 173 Score = 79.7 bits (195), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 4/170 (2%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K+++LG GVGK+++ Q+++ +F + TI D + +DD + I DTAGQ Sbjct: 7 KLVMLGAGGVGKSAMTMQFISHRFPEDHDPTI-EDAYKIRIRIDDEPANLDILDTAGQAE 65 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 F ++ + R + ++ + +T +F + ++ + R ++ P V++GNK DL Sbjct: 66 FTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQ---LIYRVRRTDDTPVVLVGNKSDL 122 Query: 130 ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 + + TK + + P+FETSA ++ F + R ++E E Sbjct: 123 KQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRRKEKE 172 >3OES-A nrPDB Length = 201 Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 20/184 (10%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 KV+ILG VGKTSL +Q+V +FS Y T+ + +K V + + + DTAGQ+ Sbjct: 26 KVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTY-SKIVTLGKDEFHLHLVDTAGQDE 84 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 + L +F G VLV+ VT+ ++F+ ++S + P V++GNK DL Sbjct: 85 YSILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKL---HEGHGKTRVPVVLVGNKADL 141 Query: 130 E-NRQV----ATKRAQAWCYSKNNIPYFETSAKEAINVEQAF----QTIAR--NALKQET 178 R+V K A++W + E+SA+E + F Q IAR N+ QE Sbjct: 142 SPEREVQAVEGKKLAESW-----GATFMESSARENQLTQGIFTKVIQEIARVENSYGQER 196 Query: 179 EVEL 182 L Sbjct: 197 RCHL 200 >4U5X-A nrPDB Length = 178 Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 18/180 (10%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 +K + +GD VGKT ++ Y + KF Y T+ +F + V VD +V + +WDTAG Sbjct: 5 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVSVDGSVVNLGLWDTAGL 63 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLD-SWRDEFLIQASPRDPENFPFVVLGNK 126 E + L YRGAD +L F + + +++ + W E R P V++G K Sbjct: 64 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPEL-----RRFAPGVPVVLVGTK 118 Query: 127 IDL-ENRQ----------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 +DL E+R + T++ + + Y E S+K N++ F T + L+ Sbjct: 119 LDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 178 >5ZHX-e nrPDB Length = 198 Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 22/190 (11%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 + S + K++I+GD GKT L+ + +F Y T+ +++ ++ VD + V + Sbjct: 3 LGSMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELA 61 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFP 119 +WDTAGQE + L Y D ++ F + +P++ + + + W E + P N P Sbjct: 62 LWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE-VKHFCP----NVP 116 Query: 120 FVVLGNKIDLENRQVATKRAQAWCYSKNNIP--------------YFETSAKEAINVEQA 165 +++GNK DL N + T+R A + P Y E SAK V + Sbjct: 117 IILVGNKKDLRNDE-HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREV 175 Query: 166 FQTIARNALK 175 F+ R AL+ Sbjct: 176 FEMATRAALQ 185 >5C2K-A nrPDB Length = 415 Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 22/181 (12%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K++I+GD GKT L+ + +F Y T+ +++ ++ VD + V + +WDTAGQE Sbjct: 14 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 72 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKID 128 + L Y D ++ F + +P++ + + + W E + P N P +++GNK D Sbjct: 73 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE-VKHFCP----NVPIILVGNKKD 127 Query: 129 LENRQVATKRAQAWCYSKNNIP--------------YFETSAKEAINVEQAFQTIARNAL 174 L N + T+R A + P Y E SAK V + F+ R AL Sbjct: 128 LRNDE-HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 186 Query: 175 K 175 + Sbjct: 187 Q 187 >5VCU-A nrPDB Length = 208 Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 18/181 (9%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +K +++GD VGKT+L+ Y + F Y T+ D K + D +V++ ++DTAGQE Sbjct: 12 IKCVVVGDGAVGKTALLIAYSSGCFPEDYVPTV-FDNYNKNIPYGDGIVSIALYDTAGQE 70 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + L Y D ++ F + PN+ + S E L +P + P V++G K+D Sbjct: 71 DYDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELKHYNP----DTPIVLVGTKLD 126 Query: 129 LENRQ-------------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 L+ + V T++ Q Y E SAK N+ +AF A+K Sbjct: 127 LKKDEEYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAIDIAMK 186 Query: 176 Q 176 Q Sbjct: 187 Q 187 >2FV8-A nrPDB Length = 207 Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 20/181 (11%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K++++GD GKT L+ + +F Y T+ +++ ++ VD + V + +WDTAGQE Sbjct: 27 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 85 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKID 128 + L Y D ++ F V +P++ + + + W E + P N P +++ NK D Sbjct: 86 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPE-VKHFCP----NVPIILVANKKD 140 Query: 129 LENRQ-------------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 L + + V T +A Y E SAK V + F+T R AL+ Sbjct: 141 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 200 Query: 176 Q 176 + Sbjct: 201 K 201 >2ATV-A nrPDB Length = 196 Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/138 (32%), Positives = 82/138 (59%), Gaps = 8/138 (5%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDT 64 K +K+ I G +GVGK++L+ +++ K+F +Y T+ + + + +DD +V+M+I DT Sbjct: 25 KSAEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTY-RHQATIDDEVVSMEILDT 83 Query: 65 AGQE-RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123 AGQE Q G R + VLV+D+T +F+ + ++ I + P+N +++ Sbjct: 84 AGQEDTIQREG--HMRWGEGFVLVYDITDRGSFEEVLPLKN---ILDEIKKPKNVTLILV 138 Query: 124 GNKIDLEN-RQVATKRAQ 140 GNK DL++ RQV+T+ + Sbjct: 139 GNKADLDHSRQVSTEEGE 156 >3TH5-A nrPDB Length = 204 Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 7/124 (5%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +K +++GD VGKT L+ Y F +Y T+ D + VMVD + V + +WDTAGQE Sbjct: 31 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPVNLGLWDTAGQE 89 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDS-WRDEFLIQASPRDPENFPFVVLGNKI 127 + L Y D ++ F + +P +F+ + + W E N P +++G K+ Sbjct: 90 DYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCP-----NTPIILVGTKL 144 Query: 128 DLEN 131 DL + Sbjct: 145 DLRD 148 >2NTY-C nrPDB Length = 180 Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 18/180 (10%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 +K + +GD VGKT ++ Y + F Y T+ +F + V+VD V + +WDTAGQ Sbjct: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGNTVNLGLWDTAGQ 64 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNK 126 E + L YRGAD +L F + + +++ + W E L +P P +++G K Sbjct: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPE-LRHYAP----GVPIILVGTK 119 Query: 127 IDL-ENRQVATKRAQAWCYSKN----------NIPYFETSAKEAINVEQAFQTIARNALK 175 +DL +++Q A + N + Y E S+K NV+ F + L+ Sbjct: 120 LDLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVLQ 179 >3BWD-D nrPDB Length = 182 Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 18/180 (10%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 +K + +GD VGKT L+ Y + F Y T+ +F + V+V+ V + +WDTAGQ Sbjct: 8 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGATVNLGLWDTAGQ 66 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLD-SWRDEFLIQASPRDPENFPFVVLGNK 126 E + L YRGAD +L F + + +++ + W E L +P P V++G K Sbjct: 67 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPE-LKHYAP----GVPIVLVGTK 121 Query: 127 IDLENRQ-----------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 +DL + + + T + + Y E S+K NV+ F R L+ Sbjct: 122 LDLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVLQ 181 >2YC4-C nrPDB Length = 208 Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 83/153 (54%), Gaps = 8/153 (5%) Query: 10 KVIILGDSGVGKTSLMNQYVNK--KFSNQYKATIGADFLTKEVMVDDRLVTMQIW--DTA 65 KV ++G++ VGK++L++ + +K KF Y T G + + V + D V+++++ DTA Sbjct: 22 KVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELFLLDTA 81 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125 G + ++ ++ G +LVFDV++ +F++ +W E L A P V++ N Sbjct: 82 GSDLYKEQISQYWNGVYYAILVFDVSSMESFESCKAWF-ELLKSARPDRERPLRAVLVAN 140 Query: 126 KIDL--ENRQVATKRAQAWCYSKNNIPYFETSA 156 K DL + QV AQ W + N + +F+ SA Sbjct: 141 KTDLPPQRHQVRLDMAQDWA-TTNTLDFFDVSA 172 >3A58-B nrPDB Length = 188 Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 20/179 (11%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K++I+GD GKT L+ +F Y T+ +++ +V VD R V + +WDTAGQE Sbjct: 12 KLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENYVA-DVEVDGRRVELALWDTAGQED 70 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKID 128 + L Y ++ ++ F + P++ + + + W E L + P +++G K+D Sbjct: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-----HFCQGVPIILVGCKVD 125 Query: 129 LEN--------RQ-----VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 L N RQ V ++ Q+ Y+E SAK V + F+ R +L Sbjct: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 >2WKQ-A nrPDB Length = 332 Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 7/127 (5%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65 K L+K +++GD VGKT L+ Y F +Y T+ D + VMVD + V + +WDTA Sbjct: 153 KELIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPVNLGLWDTA 211 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDS-WRDEFLIQASPRDPENFPFVVLG 124 G E + L Y D ++ F + +P +F + + W E N P +++G Sbjct: 212 GLEDYDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHCP-----NTPIILVG 266 Query: 125 NKIDLEN 131 K+DL + Sbjct: 267 TKLDLRD 273 >3RAP-R nrPDB Length = 167 Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 4/152 (2%) Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG 80 K++L Q+V F +Y TI DF KE+ VD ++I DTAG E+F S+ + + Sbjct: 16 KSALTVQFVTGTFIEKYDPTI-EDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKN 74 Query: 81 ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQ 140 +LV+ + +F+ + RD+ + + E P +++GNK+DLE+ + + Sbjct: 75 GQGFILVYSLVNQQSFQDIKPMRDQII---RVKRYEKVPVILVGNKVDLESEREVSSSEG 131 Query: 141 AWCYSKNNIPYFETSAKEAINVEQAFQTIARN 172 + P+ ETSAK V++ F I R Sbjct: 132 RALAEEWGCPFMETSAKSKTMVDELFAEIVRQ 163 >4MIT-A nrPDB Length = 186 Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 20/186 (10%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 62 S K +K++++GD VGKT L+ Y +KF Y T+ +++ + R + + +W Sbjct: 5 SEKPTSIKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVV-SLTAGTRQIQLALW 63 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTF-KTLDSWRDEFLIQASPRDPENFPFV 121 DTAG E + L Y A ++ F VT+ ++ + W E +I +P+ P + Sbjct: 64 DTAGLEEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPE-VIHFAPK----VPII 118 Query: 122 VLGNKIDLENRQVATKRAQAWCYSKNN-------------IPYFETSAKEAINVEQAFQT 168 ++G K+D N KR + N + Y E SAK + N++ F Sbjct: 119 LVGTKLDTRNDPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDE 178 Query: 169 IARNAL 174 + L Sbjct: 179 AVKTVL 184 >5JCP-B nrPDB Length = 419 Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 22/181 (12%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K++I+GD GKT L+ +F Y T+ +++ ++ VD + V + +WDTAGQE Sbjct: 245 KLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 303 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKID 128 + L Y D ++ F + +P++ + + + W E + P N P +++GNK D Sbjct: 304 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE-VKHFCP----NVPIILVGNKKD 358 Query: 129 LENRQVATKRAQAWCYSKNNIP--------------YFETSAKEAINVEQAFQTIARNAL 174 L N + T+R A + P Y E SAK V + F+ R AL Sbjct: 359 LRNDE-HTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 417 Query: 175 K 175 + Sbjct: 418 Q 418 >2ATX-A nrPDB Length = 194 Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 7/126 (5%) Query: 7 VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66 ++LK +++GD VGKT L+ Y N F +Y T+ D V V + + ++DTAG Sbjct: 17 LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLLGLYDTAG 75 Query: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGN 125 QE + L Y D ++ F V P +F+ + + W E L + +P N PF+++G Sbjct: 76 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPE-LKEYAP----NVPFLLIGT 130 Query: 126 KIDLEN 131 +IDL + Sbjct: 131 QIDLRD 136 >2W2X-A nrPDB Length = 185 Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 18/179 (10%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +K +++GD VGKT L+ Y F +Y T+ D + VMVD + V + +WDTAGQE Sbjct: 10 IKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDSKPVNLGLWDTAGQE 68 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + L Y D ++ F + +P +++ + R ++ + P P +++G K+D Sbjct: 69 DYDRLRPLSYPQTDVFLICFSLVSPASYENV---RAKWFPEVRHHCPST-PIILVGTKLD 124 Query: 129 L-----------ENRQVATKRAQAWCYSK--NNIPYFETSAKEAINVEQAFQTIARNAL 174 L E + Q +K +++ Y E SA ++ F R L Sbjct: 125 LRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVL 183 >3RYT-C nrPDB Length = 180 Score = 69.7 bits (169), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 7/124 (5%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +K +++GD VGKT L+ Y F +Y T+ D + VMVD + V + +WDTAG E Sbjct: 7 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPVNLGLWDTAGLE 65 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDS-WRDEFLIQASPRDPENFPFVVLGNKI 127 + L Y D ++ F + +P +F+ + + W E N P +++G K+ Sbjct: 66 DYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCP-----NTPIILVGTKL 120 Query: 128 DLEN 131 DL + Sbjct: 121 DLRD 124 >3VHL-B nrPDB Length = 195 Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 67/124 (54%), Gaps = 7/124 (5%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +K +++GD VGK L+ Y KF ++Y T+ ++ VM+ T+ ++DTAGQE Sbjct: 11 IKCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAVT-VMIGGEPYTLGLFDTAGQE 69 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKI 127 + L Y D ++ F V +P++F+ + + W E + P+ PF+++G +I Sbjct: 70 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPE-ITHHCPKT----PFLLVGTQI 124 Query: 128 DLEN 131 DL + Sbjct: 125 DLRD 128 >2Q3H-A nrPDB Length = 201 Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 7/122 (5%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +K +++GD VGKTSL+ Y + +Y T D + V VD R V +Q+ DTAGQ+ Sbjct: 21 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPT-AFDNFSAVVSVDGRPVRLQLCDTAGQD 79 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKI 127 F L Y D +L F V +P++F+ + + W E P +++G + Sbjct: 80 EFDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCP-----KAPIILVGTQS 134 Query: 128 DL 129 DL Sbjct: 135 DL 136 >2ERX-A nrPDB Length = 172 Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 5/161 (3%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 +V + G GVGK+SL+ ++V F Y T+ D + + D + T+QI DT G + Sbjct: 5 RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTV-EDTYRQVISCDKSICTLQITDTTGSHQ 63 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 F ++ +LV+ +T+ + + L ++ I D E+ P +++GNK D Sbjct: 64 FPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQ--ICEIKGDVESIPIMLVGNKCDE 121 Query: 130 E-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169 +R+V + A+A + + ETSAK NV++ FQ + Sbjct: 122 SPSREVQSSEAEALARTW-KCAFMETSAKLNHNVKELFQEL 161 >3T5G-A nrPDB Length = 181 Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 14/173 (8%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K+ ILG VGK+SL Q+V +F + Y TI F TK + V+ + +Q+ DTAGQ+ Sbjct: 8 KIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKLITVNGQEYHLQLVDTAGQDE 66 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 + + + +LV+ VT+ +F+ + + L P +++GNK DL Sbjct: 67 YSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKV---QIPIMLVGNKKDL 123 Query: 130 ENRQVATKR-----AQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177 +V + A++W N + E+SAKE F+ I A K + Sbjct: 124 HMERVISYEEGKALAESW-----NAAFLESSAKENQTAVDVFRRIILEAEKMD 171 >1RYH-A nrPDB Length = 203 Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 26/143 (18%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +K +++GD VGKT L+ Y F +Y T+ D + VMVD + V + +WDTAGQE Sbjct: 6 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPVNLGLWDTAGQE 64 Query: 69 RFQSLGVAFY--------------RG-----ADCCVLVFDVTAPNTFKTLDS-WRDEFLI 108 + L Y RG AD ++ F + +P +F+ + + W E Sbjct: 65 DYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEVRH 124 Query: 109 QASPRDPENFPFVVLGNKIDLEN 131 N P +++G K+DL + Sbjct: 125 HCP-----NTPIILVGTKLDLRD 142 >2GF0-A nrPDB Length = 199 Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 12/153 (7%) Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG 80 K+SL+ ++V F + Y TI D + + D + T+QI DT G +F ++ Sbjct: 21 KSSLVLRFVKGTFRDTYIPTI-EDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISK 79 Query: 81 ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQ 140 +LVF VT+ + + L LI E+ P +++GNK D R+V T+ AQ Sbjct: 80 GHAFILVFSVTSKQSLEELGPIYK--LIVQIKGSVEDIPVMLVGNKCDETQREVDTREAQ 137 Query: 141 A----WCYSKNNIPYFETSAKEAINVEQAFQTI 169 A W + ETSAK NV++ FQ + Sbjct: 138 AVAQEW-----KCAFMETSAKMNYNVKELFQEL 165 >5ZVP-A nrPDB Length = 181 Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 20/179 (11%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K++I+GD GKT L+ F Y T+ +++ +V VD + V + +WDTAGQE Sbjct: 7 KLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENYVA-DVEVDGKHVELALWDTAGQED 65 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKID 128 + L Y + ++ F + +P++ + + W E L + P +++G K D Sbjct: 66 YDRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVLHFC-----QGLPIILVGCKKD 120 Query: 129 LEN-------------RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 L + + V ++ + Y E SA+ V + F+ R AL Sbjct: 121 LRHDPKTIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRAAL 179 >2CJW-A nrPDB Length = 192 Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 11/167 (6%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKA-TIGADFLTKEVMVDDR---LVTMQIWDTA 65 +V+++G+ GVGK++L N + S +G D + +MVD ++ + +W+ Sbjct: 8 RVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWENK 67 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125 G+ + L + D ++V+ +T +F+ R + R E+ P +++GN Sbjct: 68 GENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQL---RRARQTEDIPIILVGN 122 Query: 126 KIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 K DL R+V+ +A C + + ETSA NV++ F+ I R Sbjct: 123 KSDLVRCREVSVSEGRA-CAVVFDCKFIETSAAVQHNVKELFEGIVR 168 >2NZJ-A nrPDB Length = 175 Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 8/163 (4%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L +V++LGD GVGKTSL + + K+ + ++ +G D + + VD T+ + DT Sbjct: 4 LYRVVLLGDPGVGKTSLASLFAGKQERDLHE-QLGEDVYERTLTVDGEDTTLVVVDTWEA 62 Query: 68 ERFQSLGV--AFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125 E+ + +G V+V+ + +F++ R + ++ P +++GN Sbjct: 63 EKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQL---RRTHQADHVPIILVGN 119 Query: 126 KIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQ 167 K DL R+V+ + +A C + + ETSA NV + F+ Sbjct: 120 KADLARCREVSVEEGRA-CAVVFDCKFIETSATLQHNVAELFE 161 >1M7B-A nrPDB Length = 184 Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 28/105 (26%), Positives = 56/105 (53%), Gaps = 2/105 (1%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 62 S + V K++++GDS GKT+L++ + F Y T+ ++ T +D + + + +W Sbjct: 2 SNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENY-TASFEIDTQRIELSLW 60 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKT-LDSWRDEF 106 DT+G + ++ Y +D ++ FD++ P T + L W+ E Sbjct: 61 DTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEI 105 >1GWN-A nrPDB Length = 205 Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 2/107 (1%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M + V K++++GDS GKT+L++ + F Y T+ ++ T +D + + + Sbjct: 21 MDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENY-TASFEIDTQRIELS 79 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKT-LDSWRDEF 106 +WDT+G + ++ Y +D ++ FD++ P T + L W+ E Sbjct: 80 LWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEI 126 >2G3Y-A nrPDB Length = 211 Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 11/167 (6%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKA-TIGADFLTKEVMVDDR---LVTMQIWDTA 65 +V+++G+ GVGK++L N + S +G D + +MVD ++ + +W+ Sbjct: 39 RVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWENK 98 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125 G+ + L + D ++V+ +T +F+ R + R E+ P +++GN Sbjct: 99 GENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQL---RRARQTEDIPIILVGN 153 Query: 126 KIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 K DL R+V+ +A C + + ETSA NV++ F+ I R Sbjct: 154 KSDLVRCREVSVSEGRA-CAVVFDCKFIETSAAVQHNVKELFEGIVR 199 >3IHW-A nrPDB Length = 184 Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 13/169 (7%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 LKV I+G+ GK++L+++Y+ + Q ++ G F KE++VD + + I D G Sbjct: 21 LKVGIVGNLSSGKSALVHRYLTGTYV-QEESPEGGRF-KKEIVVDGQSYLLLIRDEGGPP 78 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNK-- 126 Q F D V VF + +F+T+ ++ FL S R+ P V++G + Sbjct: 79 ELQ-----FAAWVDAVVFVFSLEDEISFQTVYNY---FLRLCSFRNASEVPMVLVGTQDA 130 Query: 127 IDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 I N R + RA+ Y+ET A +NVE+ FQ +A+ + Sbjct: 131 ISAANPRVIDDSRARKLSTDLKRCTYYETCATYGLNVERVFQDVAQKVV 179 >2IWR-A nrPDB Length = 178 Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 23/175 (13%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKF-------SNQYKATIGADFLTKEVMVDDRLVTMQI 61 L++ +LGD+ GK+SL+++++ + S QYK KE++VD + + I Sbjct: 8 LRLGVLGDARSGKSSLIHRFLTGSYQVLEKTESEQYK---------KEMLVDGQTHLVLI 58 Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL-IQASPRDPENFPF 120 + AG + F AD + VF + N+F+ + + ++ R Sbjct: 59 REEAG-----APDAKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALAL 113 Query: 121 VVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 V ++I + R V RA+A C Y+ET A +NV++ FQ +A+ + Sbjct: 114 VGTQDRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVV 168 >3REG-A nrPDB Length = 194 Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 10/163 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 LK++++GD VGKT L+ + + Y T+ +F + + + + +WDTAGQE Sbjct: 24 LKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENF-SHVMKYKNEEFILHLWDTAGQE 82 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDS-WRDEFLIQASPRDPENFPFVVLGNKI 127 + L Y +D +L F V +F + + W E + V++G K+ Sbjct: 83 EYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEI-----KHYIDTAKTVLVGLKV 137 Query: 128 DLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQ 167 DL + V + C + Y E S+ I + + F+ Sbjct: 138 DLRKDGSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFE 180 >5C1S-A nrPDB Length = 391 Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 92/176 (52%), Gaps = 15/176 (8%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++++++G SGVGKT+L + + S G + K V +D+ + + I D AGQ+ Sbjct: 63 IRLLVVGSSGVGKTTLCDCFFESHQSQ------GEETREKHVQIDNDFIRISISDIAGQQ 116 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDS-WRDEFLIQASPRDPENFPFVVLGNKI 127 F + Y G D ++++D+T +F L + W + + + + +++GNK Sbjct: 117 SFYACDNP-YDGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNI----DTQIIIIGNKK 171 Query: 128 DLENRQVATKRAQAWCYSKNNI-PYFETSAKEAINVEQAFQTIARNALKQETEVEL 182 D E ++ T R +A ++++ + ++E S K+ + + F I+R+ L+ + ++ + Sbjct: 172 DQEIDRIIT-RKEAEQFAQDRLCQFYEISTKDD-SCQLLFDCISRDFLQCDIKIRM 225 Score = 26.9 bits (58), Expect = 6.2, Method: Compositional matrix adjust. Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 20/183 (10%) Query: 7 VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFL---TKEVMVDDRLVTMQIWD 63 + ++++++GD VGKT+ + +KF+ Q G DF+ T ++ + + D Sbjct: 221 IKIRMLMVGDQNVGKTTFI-----RKFALQ--DPTGHDFMNAITTRFEMEKIKYEIIMID 273 Query: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEF-LIQASPRDPENFPFVV 122 + A R + ++V+D+T +F+ + R + LI D V+ Sbjct: 274 WGFYNKLLQTNPAISRTIEAILIVYDITNEESFQNIH--RKYYPLINNKFSDVAG---VI 328 Query: 123 LGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR----NALKQET 178 +G K DLE ++ T Y E S+K+ + + +A N LK E Sbjct: 329 VGYKTDLEAQRKITMGDALTLADWLGYKYVEMSSKDTEDHSSIIKALAHSIRINRLKIEQ 388 Query: 179 EVE 181 E Sbjct: 389 SYE 391 >2AL7-A nrPDB Length = 186 Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 12/169 (7%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +++ ++G GKT+ +N + +FS T+G F ++V + VT++IWD GQ Sbjct: 23 MELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVTKGN--VTIKIWDIGGQP 78 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF+S+ + RG + V + D + +++ R+E + P +VLGNK D Sbjct: 79 RFRSMWERYCRGVNAIVYMIDAA---DREKIEASRNELHNLLDKPQLQGIPVLVLGNKRD 135 Query: 129 LEN----RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 173 L N +Q+ K + I + S KE N++ Q + +++ Sbjct: 136 LPNALDEKQLIEKMNLS-AIQDREICCYSISCKEKDNIDITLQWLIQHS 183 >3CBQ-A nrPDB Length = 195 Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 16/176 (9%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTM--- 59 +K + KV+++G+SGVGK++L + + + ++ D + +MVD VT+ Sbjct: 18 GQKDGIFKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTLVVY 77 Query: 60 QIW---DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPE 116 IW D G R L + D ++VF VT +F + + L + R Sbjct: 78 DIWEQGDAGGWLRDHCL-----QTGDAFLIVFSVTDRRSFSKVP---ETLLRLRAGRPHH 129 Query: 117 NFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 + P +++GNK DL +R+V+ + + + + + ETSA N + F+ R Sbjct: 130 DLPVILVGNKSDLARSREVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVR 184 >2REX-B nrPDB Length = 197 Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 2/99 (2%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K++++GD GKT+++ + Y T+ ++ T + +++ V + +WDT+G Sbjct: 12 KLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENY-TACLETEEQRVELSLWDTSGSPY 70 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKT-LDSWRDEFL 107 + ++ Y +D +L FD++ P T + L WR E L Sbjct: 71 YDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEIL 109 >3Q72-A nrPDB Length = 166 Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 7/164 (4%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 KV++LG GVGK++L + + +A + ++VD ++ ++D Q+ Sbjct: 4 KVLLLGAPGVGKSALARIF--GGVEDGPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQDG 61 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 + L D V+V+ VT +F+ R + R ++ P +++GNK DL Sbjct: 62 GRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQL---RRARQTDDVPIILVGNKSDL 118 Query: 130 -ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN 172 +R+V+ +A C + + ETSA NV+ F+ + R Sbjct: 119 VRSREVSVDEGRA-CAVVFDCKFIETSAALHHNVQALFEGVVRQ 161 >3Q85-A nrPDB Length = 169 Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 20/173 (11%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDT--- 64 + KV+++G+SGVGK++L + + + ++ D + +MVD VT+ ++D Sbjct: 2 VFKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDIWEQ 61 Query: 65 --AG---QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119 AG Q+ G AF ++VF VT +F + + L + R + P Sbjct: 62 GDAGGWLQDHCLQTGDAF-------LIVFSVTDRRSFSKVP---ETLLRLRAGRPHHDLP 111 Query: 120 FVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 +++GNK DL +R+V+ + + + + + ETSA N + F+ R Sbjct: 112 VILVGNKSDLARSREVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVR 163 >3C5C-A nrPDB Length = 187 Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 16/175 (9%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ- 67 + + ILG G GK++L +++ K+F ++Y + D + E VD + V +++ DTA Sbjct: 22 VNLAILGRRGAGKSALTVKFLTKRFISEYDPNL-EDTYSSEETVDHQPVHLRVMDTADLD 80 Query: 68 -----ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 ER+ + AF ++V+ V + +F + S+ E L + + P ++ Sbjct: 81 TPRNCERYLNWAHAF-------LVVYSVDSRQSFDSSSSYL-ELLALHAKETQRSIPALL 132 Query: 123 LGNKIDLENRQVATKRAQAWCYSKNNIPYFETSA-KEAINVEQAFQTIARNALKQ 176 LGNK+D+ + TK + +FE SA + +V+ F R A ++ Sbjct: 133 LGNKLDMAQYRQVTKAEGVALAGRFGCLFFEVSACLDFEHVQHVFHEAVREARRE 187 >3D6T-B nrPDB Length = 171 Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 16/144 (11%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSN--QYKATIGADFLTKEVMVDD---RLVTMQIWD 63 +K++I+G++G GKT+L+ Q + K S+ AT+G D + + D R + + +WD Sbjct: 1 MKLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWD 60 Query: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNT-FKTLDSWRDEFLIQASPRDPENFPFVV 122 AG+E F S F + V+D++ + W +AS + P ++ Sbjct: 61 FAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARAS-----SSPVIL 115 Query: 123 LGNKIDLENRQVATKRAQAWCYSK 146 +G +D V+ ++ + C SK Sbjct: 116 VGTHLD-----VSDEKQRKACMSK 134 >4ILE-A nrPDB Length = 184 Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 37/168 (22%), Positives = 78/168 (46%), Gaps = 10/168 (5%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +++ ++G GKT+ +N + +F+ T+G F +++ + VT+++WD GQ Sbjct: 23 MELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVG--FNMRKITKGN--VTIKLWDIGGQP 78 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF+S+ + RG V + D + +++ ++E + P +VLGNK D Sbjct: 79 RFRSMWERYCRGVSAIVYMVDAADQ---EKIEASKNELHNLLDKPQLQGIPVLVLGNKRD 135 Query: 129 LE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 173 L + + ++ I + S KE N++ Q + +++ Sbjct: 136 LPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQHS 183 >4WNR-A nrPDB Length = 349 Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/176 (26%), Positives = 71/176 (40%), Gaps = 23/176 (13%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +KV+++GD GKTSL+ + + + F T G + D+ + + WD GQE Sbjct: 42 VKVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIKVNFWDFGGQE 101 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRD---EFLIQASPRDPENFPFVVLGN 125 + F +LV LDS RD E+ ++ + P +V N Sbjct: 102 IMHATHQFFLSKRSLYILV-----------LDSRRDEKAEYWLKHIRSFGGDSPVLVALN 150 Query: 126 KIDLENRQVATKRAQAWCYSKNNIP----YFETSAKEAINVEQAFQTIARNALKQE 177 KID EN R + + P +F S KE +E Q + + LK E Sbjct: 151 KID-ENPSFELNRK----FLQEKYPSIKGFFRISCKEDRGIEGFSQKLKKELLKVE 201 >1G7S-A nrPDB Length = 594 Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 69/178 (38%), Gaps = 42/178 (23%) Query: 11 VIILGDSGVGKTSLMNQY----VNKKFSNQYKATIGA-------------DFLTKEVMVD 53 V +LG GKT+L++ V + + IGA DFL K+ + Sbjct: 8 VSVLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATEIPMDVIEGICGDFL-KKFSIR 66 Query: 54 DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVT---APNTFKTLDSWRDEFLIQA 110 + L + DT G E F +L AD +L+ D+ P T + L+ R Sbjct: 67 ETLPGLFFIDTPGHEAFTTLRKRGGALADLAILIVDINEGFKPQTQEALNILR------- 119 Query: 111 SPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQT 168 PFVV NKID R W + P+ ET +K+ I V+Q T Sbjct: 120 ----MYRTPFVVAANKID---------RIHGWRVHEGR-PFMETFSKQDIQVQQKLDT 163 >5NZV-F nrPDB Length = 181 Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 24/179 (13%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM------VDDRLVTMQIW 62 ++++++G G GKT+++ YK +G T + V + ++ +W Sbjct: 18 MRILMVGLDGAGKTTVL-----------YKLKLGEVITTIPTIGFNVETVQYKNISFTVW 66 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 D GQ+R +SL +YR + + V D N + R+ + + N ++V Sbjct: 67 DVGGQDRIRSLWRHYYRNTEGVIFVVD---SNDRSRIGEAREVMQRMLNEDELRNAAWLV 123 Query: 123 LGNKIDL-ENRQVATKRAQAWCYSKNNIPYF--ETSAKEAINVEQAFQTIARNALKQET 178 NK DL E A + +S N P+F T A + + + ++ N+LK T Sbjct: 124 FANKQDLPEAMSAAEITEKLGLHSIRNRPWFIQATCATSGEGLYEGLEWLS-NSLKNST 181 >3DPU-A nrPDB Length = 535 Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE------VMVDDRL--VTMQ 60 +KV ++GD GKTSL+ Q + + F + T G + +TK+ + DD L Sbjct: 42 IKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFH 101 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENF-- 118 WD GQE + F + +L+ D DS + +L R E + Sbjct: 102 FWDFGGQEIMHASHQFFMTRSSVYMLLLDSRT-------DSNKHYWL-----RHIEKYGG 149 Query: 119 --PFVVLGNKID 128 P +V+ NKID Sbjct: 150 KSPVIVVMNKID 161 >6IAE-A nrPDB Length = 223 Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 13/123 (10%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKK--FSNQYKATIGADFLTKEVMVDD----------- 54 L+K+++LG S GK+++ N + + +Y T L E+ +DD Sbjct: 9 LVKILVLGPSKSGKSTVTNFLAGTRDTPTKEYHETNPLRVLEVEIALDDTRRSGRQAAGL 68 Query: 55 RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD 114 + +Q+WD G + Q+ A AD + VF+ + K L W F + D Sbjct: 69 KKAVVQLWDVGGSSKHQAGWPAIASNADGIIYVFNPEVKGSEKELLLWYKNFALNQDELD 128 Query: 115 PEN 117 +N Sbjct: 129 DDN 131 >5HZH-A nrPDB Length = 332 Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 6/89 (6%) Query: 44 DFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDS-W 102 D KE+ + V + +WDTAG E + L Y D ++ F + +P +F+ + + W Sbjct: 190 DEAAKELGSGGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKW 249 Query: 103 RDEFLIQASPRDPENFPFVVLGNKIDLEN 131 E N P +++G K+DL + Sbjct: 250 YPEVRHHCP-----NTPIILVGTKLDLRD 273 Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD 53 +K +++GD VGKT L+ Y F +Y T+ D + VMVD Sbjct: 7 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVD 50 >5KH0-A nrPDB Length = 396 Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 30/170 (17%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFS---NQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 + I G VGK+S MN + ++ S N T F + E+ + + + DT G Sbjct: 11 IAITGRRNVGKSSFMNALIGQEVSIVSNVAGTTTDPVFKSMEL---SPVGPITLIDTPGL 67 Query: 68 ERFQSLGV--------AFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119 + LG+ + YR ADC +L+ D N + + E P Sbjct: 68 DDVGELGIKRIKKAKKSLYR-ADCGILIVDDIPGNFEEQIIKLFKEL----------EIP 116 Query: 120 FVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169 + + NKID + + K Y K N+P + SA + I E+ +TI Sbjct: 117 YFIAINKIDTIDHENIEKE-----YKKYNVPILKVSALKKIGFEKIGKTI 161 >2LKD-A nrPDB Length = 178 Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 19/131 (14%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M R V V I+G GKT+L++ + K + Q I +V V+D+ +T Sbjct: 4 MVERPPV---VTIMGHVDHGKTTLLDAIRHSKVTEQEAGGITQHIGAYQVTVNDKKITF- 59 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVF---DVTAPNTFKTLDSWRDEFLIQASPRDPEN 117 DT G E F ++ + D +LV D P T + ++ + N Sbjct: 60 -LDTPGHEAFTTMRARGAQVTDIVILVVAADDGVMPQTVEAINHAK-----------AAN 107 Query: 118 FPFVVLGNKID 128 P +V NK+D Sbjct: 108 VPIIVAINKMD 118 >2H16-A nrPDB Length = 183 Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 8/121 (6%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 KVII+G GKT+++ Q+ + + TIG++ +E+++++ M WD GQE Sbjct: 24 KVIIVGLDNAGKTTILYQFSMNEVVHT-SPTIGSN--VEEIVINNTRFLM--WDIGGQES 78 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 +S +Y + ++V D T R+E + D ++ NK D+ Sbjct: 79 LRSSWNTYYTNTEFVIVVVDSTDRERISVT---REELYKMLAHEDLRKAGLLIFANKQDV 135 Query: 130 E 130 + Sbjct: 136 K 136 >3LRP-A nrPDB Length = 181 Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 20/135 (14%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM------VDDRLVTMQIW 62 ++++++G GKT+++ YK +G T + V+ R ++ +W Sbjct: 18 VRILMVGLDAAGKTTIL-----------YKVKLGEVVTTIPTIGFNVETVEFRNISFTVW 66 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 D GQ++ + L +Y D + V D N + +D R+E + + ++ +V Sbjct: 67 DVGGQDKIRPLWRHYYSNTDGLIFVVD---SNDRERIDDAREELHRMINEEELKDAIILV 123 Query: 123 LGNKIDLENRQVATK 137 NK DL N A + Sbjct: 124 FANKQDLPNAMSAAE 138 >3GEH-A nrPDB Length = 462 Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust. Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 38/191 (19%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADF--LTKEVMVDDRLVT----MQIW 62 LKV I+G VGK+SL+N + +Q I D T++V V+ +LV +Q+ Sbjct: 225 LKVAIVGRPNVGKSSLLNAW------SQSDRAIVTDLPGTTRDV-VESQLVVGGIPVQVL 277 Query: 63 DTAG----QERFQSLGVAFYR----GADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD 114 DTAG ++ + +GV R AD +L D A + T D E Q R Sbjct: 278 DTAGIRETSDQVEKIGVERSRQAANTADLVLLTID--AATGWTTGDQ---EIYEQVKHR- 331 Query: 115 PENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSA--KEAIN-VEQAFQTIAR 171 P +++ NKIDL +Q+ T + Y +N T+A K+ I+ +E A I + Sbjct: 332 ----PLILVMNKIDLVEKQLIT----SLEYPENITQIVHTAAAQKQGIDSLETAILEIVQ 383 Query: 172 NALKQETEVEL 182 Q +++L Sbjct: 384 TGKVQAADMDL 394 >1YZG-A nrPDB Length = 179 Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 8/128 (6%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 KVII+G GKT+++ Q++ + + TIG++ +E++V + M WD GQE Sbjct: 18 KVIIVGLDNAGKTTILYQFLMNEVVHT-SPTIGSN--VEEIVVKNTHFLM--WDIGGQES 72 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 +S +Y + +LV D ++E + D ++ NK D+ Sbjct: 73 LRSSWNTYYSNTEFIILVVDSIDRERLAIT---KEELYRMLAHEDLRKAAVLIFANKQDM 129 Query: 130 ENRQVATK 137 + A + Sbjct: 130 KGCMTAAE 137 >6CES-A nrPDB Length = 313 Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 19/131 (14%) Query: 10 KVIILGDSGVGKTSLMN----QYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65 KV+++G SG GKTS+ + Y+ + + + ATI + + + + + +WD Sbjct: 9 KVLLMGKSGSGKTSMRSIIFANYIARD-TRRLGATIDVEHSHVRFLGN---LVLNLWDCG 64 Query: 66 GQERFQ-----SLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRD--EFLIQASPRDPENF 118 GQ+ F S +R + + VFDV + K + ++ E ++Q SP D + F Sbjct: 65 GQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSP-DAKIF 123 Query: 119 PFVVLGNKIDL 129 V +K+DL Sbjct: 124 CLV---HKMDL 131 >4BAS-A nrPDB Length = 199 Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust. Identities = 39/183 (21%), Positives = 75/183 (40%), Gaps = 13/183 (7%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQY-KATIGADFLTKEVMVDDRLVTMQI 61 + K L+V++ G GKT+++NQ + S+++ AT+G + T E V + Sbjct: 12 GQSKTKLQVVMCGLDNSGKTTIINQVKPAQSSSKHITATVGYNVETFE----KGRVAFTV 67 Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPR----DPEN 117 +D G ++F+ L +Y D + V D + + S L R Sbjct: 68 FDMGGAKKFRGLWETYYDNIDAVIFVVDSSDHLRLCVVKSEIQAMLKHEDIRRELPGGGR 127 Query: 118 FPFVVLGNKIDLENRQVATKRAQAWCYSK--NNIPY--FETSAKEAINVEQAFQTIARNA 173 PF+ NK+D + A + + + + P+ F ++ + V + F + A Sbjct: 128 VPFLFFANKMDAAGAKTAAELVEILDLTTLMGDHPFVIFASNGLKGTGVHEGFSWLQETA 187 Query: 174 LKQ 176 +Q Sbjct: 188 SRQ 190 >6HLU-A nrPDB Length = 974 Score = 37.7 bits (86), Expect = 0.003, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 24/132 (18%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE------VMVDDRL--VTMQ 60 +KV ++GD GKTSL+ Q + + F + T G + +TK+ + DD L Sbjct: 481 IKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFH 540 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENF-- 118 WD GQE + F + +L+ D DS + +L R E + Sbjct: 541 FWDFGGQEIMHASHQFFMTRSSVYMLLLD-------SRTDSNKHYWL-----RHIEKYGG 588 Query: 119 --PFVVLGNKID 128 P +V+ NKID Sbjct: 589 KSPVIVVMNKID 600 >4YLG-A nrPDB Length = 173 Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 8/121 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++++++G GKTS++ + + TIG + T V+ + ++ +WD GQ+ Sbjct: 14 MRILMVGLDAAGKTSILYKLKLGEIVTTI-PTIGFNVET----VEYKNISFTVWDVGGQD 68 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + + L +Y+ + V D N + R+E + + + N +V NK D Sbjct: 69 KIRPLWRHYYQNTQAIIFVVD---SNDRDRIGEAREELMKMLNEDEMRNAILLVFANKHD 125 Query: 129 L 129 L Sbjct: 126 L 126 >2GJ9-A nrPDB Length = 172 Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 69/177 (38%), Gaps = 28/177 (15%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYK-ATIGADFLTKEVMVDDRLVTMQIWDTAG- 66 +KV+I G GK+SL+N ++ + A D L + + +D + + I DTAG Sbjct: 5 MKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDG--MPLHIIDTAGL 62 Query: 67 ---QERFQSLGVAF----YRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119 + + +G+ AD + + D T + + W EF+ R P P Sbjct: 63 REASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIW-PEFI----ARLPAKLP 117 Query: 120 FVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 V+ NK D+ + N SA+ V+ + RN LKQ Sbjct: 118 ITVVRNKADITGETLGMSEV-------NGHALIRLSARTGEGVD-----VLRNHLKQ 162 >6GNI-B nrPDB Length = 167 Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 14/125 (11%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSN---QYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66 K++ LG GKT+L++ N + + + T ++E+ + + + +D G Sbjct: 3 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPT------SEELAIGN--IKFTTFDLGG 54 Query: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNK 126 + + L ++ + V + D P F D R E + + ++ PFV+LGNK Sbjct: 55 HIQARRLWKDYFPEVNGIVFLVDAADPERF---DEARVELDALFNIAELKDVPFVILGNK 111 Query: 127 IDLEN 131 ID N Sbjct: 112 IDAPN 116 >3LVQ-E nrPDB Length = 497 Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust. Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 20/129 (15%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM------VDDRLVTMQIW 62 +++++LG GKT+++ YK +G T + V + V +W Sbjct: 323 MRILMLGLDAAGKTTIL-----------YKLKLGQSVTTIPTVGFNVETVTYKNVKFNVW 371 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 D GQ++ + L +Y G + V D + +D R E + R+ + ++ Sbjct: 372 DVGGQDKIRPLWRHYYTGTQGLIFVVDCADRD---RIDEARQELHRIINDREMRDAIILI 428 Query: 123 LGNKIDLEN 131 NK DL + Sbjct: 429 FANKQDLPD 437 >2A5F-A nrPDB Length = 175 Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust. Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 20/129 (15%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM------VDDRLVTMQIW 62 +++++LG GKT+++ YK +G T + V + V +W Sbjct: 14 MRILMLGLDAAGKTTIL-----------YKLKLGQSVTTIPTVGFNVETVTYKNVKFNVW 62 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 D GQ++ + L +Y G + V D + +D R E + R+ + ++ Sbjct: 63 DVGGQDKIRPLWRHYYTGTQGLIFVVDCADRD---RIDEARQELHRIINDREMRDAIILI 119 Query: 123 LGNKIDLEN 131 NK DL + Sbjct: 120 FANKQDLPD 128 >1XZP-A nrPDB Length = 482 Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust. Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 14/96 (14%) Query: 9 LKVIILGDSGVGKTSLMNQYVN--KKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66 L+++I+G VGK++L+N+ +N + T D +++E+++ R + +I DTAG Sbjct: 244 LRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTT-RDVISEEIVI--RGILFRIVDTAG 300 Query: 67 -----QERFQSLGVAF----YRGADCCVLVFDVTAP 93 + + LG+ AD + V D ++P Sbjct: 301 VRSETNDLVERLGIERTLQEIEKADIVLFVLDASSP 336 >3O47-A nrPDB Length = 329 Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust. Identities = 25/123 (20%), Positives = 58/123 (47%), Gaps = 8/123 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++++++G GKT+++ + + TIG + T V+ + ++ +WD GQ+ Sbjct: 166 MRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVET----VEYKNISFTVWDVGGQD 220 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + + L +++ + V D N + ++ R+E + + + + +V NK D Sbjct: 221 KIRPLWRHYFQNTQGLIFVVD---SNDRERVNEAREELMRMLAEDELRDAVLLVFANKQD 277 Query: 129 LEN 131 L N Sbjct: 278 LPN 280 >1KSG-A nrPDB Length = 186 Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust. Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 5/81 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 L++++LG GKT+++ ++ N + + T+G + T E R + IWD GQ+ Sbjct: 19 LRLLMLGLDNAGKTTILKKF-NGEDVDTISPTLGFNIKTLE----HRGFKLNIWDVGGQK 73 Query: 69 RFQSLGVAFYRGADCCVLVFD 89 +S ++ D + V D Sbjct: 74 SLRSYWRNYFESTDGLIWVVD 94 >1M2O-B nrPDB Length = 190 Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust. Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 14/125 (11%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSN---QYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66 K++ LG GKT+L++ N + + + T ++E+ + + + +D G Sbjct: 25 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPT------SEELAIGN--IKFTTFDLGG 76 Query: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNK 126 + + L ++ + V + D P F D R E + + ++ PFV+LGNK Sbjct: 77 HIQARRLWKDYFPEVNGIVFLVDAADPERF---DEARVELDALFNIAELKDVPFVILGNK 133 Query: 127 IDLEN 131 ID N Sbjct: 134 IDAPN 138 >2H57-A nrPDB Length = 190 Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust. Identities = 33/155 (21%), Positives = 59/155 (38%), Gaps = 4/155 (2%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 + V+ LG GKT+++N+ K SN I ++ ++D +GQ Sbjct: 22 VHVLCLGLDNSGKTTIINKL---KPSNAQSQNILPTIGFSIEKFKSSSLSFTVFDMSGQG 78 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 R+++L +Y+ + V D + D L + P + NK+D Sbjct: 79 RYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKH-RRIPILFFANKMD 137 Query: 129 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVE 163 L + + K +Q C + A +AI E Sbjct: 138 LRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGE 172 >4N3G-A nrPDB Length = 603 Score = 34.3 bits (77), Expect = 0.035, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 70/186 (37%), Gaps = 50/186 (26%) Query: 13 ILGDSGVGKTSLMNQY----VNKKFSNQYKATIGADFLTKEVMVDDRLVT---------- 58 ILG GKT L+++ V + + IGA + E + V Sbjct: 15 ILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEFKV 74 Query: 59 --MQIWDTAGQERFQSLGVAFYRGADCC---VLVFDVTA---PNTFKTLDSWRDEFLIQA 110 + I DT G E F +L RG+ C +LV D+ P T ++L R+ Sbjct: 75 PGLLIIDTPGHESFSNL---RSRGSSLCNIAILVVDIMHGLEPQTIESLRLLRE------ 125 Query: 111 SPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA 170 PFVV NKID R W +NN + E+ A + V+ F Sbjct: 126 -----RKTPFVVALNKID---------RLYGWKKIENN-GFRESFALQNKAVQNEF---- 166 Query: 171 RNALKQ 176 RN L Q Sbjct: 167 RNRLDQ 172 >4TN1-B nrPDB Length = 345 Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 70/186 (37%), Gaps = 50/186 (26%) Query: 13 ILGDSGVGKTSLMNQY----VNKKFSNQYKATIGADFLTKEVMVDDRLVT---------- 58 ILG GKT L+++ V + + IGA + E + V Sbjct: 15 ILGHVRTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEFKV 74 Query: 59 --MQIWDTAGQERFQSLGVAFYRGADCC---VLVFDVTA---PNTFKTLDSWRDEFLIQA 110 + I DT G E F +L RG+ C +LV D+ P T ++L R+ Sbjct: 75 PGLLIIDTPGHESFSNL---RSRGSSLCNIAILVVDIMHGLEPQTIESLRLLRE------ 125 Query: 111 SPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA 170 PFVV NKID R W +NN + E+ A + V+ F Sbjct: 126 -----RKTPFVVALNKID---------RLYGWKKIENN-GFRESFALQNKAVQNEF---- 166 Query: 171 RNALKQ 176 RN L Q Sbjct: 167 RNRLDQ 172 >5EE5-B nrPDB Length = 171 Score = 34.3 bits (77), Expect = 0.037, Method: Compositional matrix adjust. Identities = 34/162 (20%), Positives = 64/162 (39%), Gaps = 11/162 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++++ILG G GKT+++ + + TIG + T V + + Q+WD G Sbjct: 8 MRILILGLDGAGKTTILYRLQVGEVVTTI-PTIGFNVET----VTYKNLKFQVWDLGGLT 62 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + +Y D + V D + S E + + VV NK D Sbjct: 63 SIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKS---ELVAMLEEEELRKAILVVFANKQD 119 Query: 129 LENRQVATKRAQAW---CYSKNNIPYFETSAKEAINVEQAFQ 167 +E +++ A + F+TSA + +++A + Sbjct: 120 MEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAME 161 >3C5H-A nrPDB Length = 255 Score = 34.3 bits (77), Expect = 0.037, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 119 PFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 P VV+ K D E + + A + SK N+ ETSA+ +NV+ AF T+ + Sbjct: 200 PIVVVLTKCD-EGVERYIRDAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQ 251 >6FAE-B nrPDB Length = 213 Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust. Identities = 25/129 (19%), Positives = 57/129 (44%), Gaps = 20/129 (15%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM------VDDRLVTMQIW 62 ++++++G GKT+++ YK +G T + V+ + ++ +W Sbjct: 50 MRILMVGLDAAGKTTIL-----------YKLKLGEIVTTIPTIGFNVETVEYKNISFTVW 98 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 D GQ++ + L +++ + V D N + ++ R+E + + + + +V Sbjct: 99 DVGGQDKIRPLWRHYFQNTQGLIFVVD---SNDRERVNEAREELMRMLAEDELRDAVLLV 155 Query: 123 LGNKIDLEN 131 NK DL N Sbjct: 156 FANKQDLPN 164 >4NCL-A nrPDB Length = 457 Score = 34.3 bits (77), Expect = 0.041, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 70/186 (37%), Gaps = 50/186 (26%) Query: 13 ILGDSGVGKTSLMNQY----VNKKFSNQYKATIGADFLTKEVMVDDRLVT---------- 58 ILG GKT L+++ V + + IGA + E + V Sbjct: 15 ILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEFKV 74 Query: 59 --MQIWDTAGQERFQSLGVAFYRGADCC---VLVFDVTA---PNTFKTLDSWRDEFLIQA 110 + I DT G E F +L RG+ C +LV D+ P T ++L R+ Sbjct: 75 PGLLIIDTPGHESFSNL---RSRGSSLCNIAILVVDIMHGLEPQTIESLRLLRE------ 125 Query: 111 SPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA 170 PFVV NKID R W +NN + E+ A + V+ F Sbjct: 126 -----RKTPFVVALNKID---------RLYGWKKIENN-GFRESFALQNKAVQNEF---- 166 Query: 171 RNALKQ 176 RN L Q Sbjct: 167 RNRLDQ 172 >6BBQ-A nrPDB Length = 520 Score = 33.9 bits (76), Expect = 0.050, Method: Compositional matrix adjust. Identities = 27/127 (21%), Positives = 51/127 (40%), Gaps = 20/127 (15%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM------VDDRLVTMQIW 62 +++++LG GKT+++ YK +G T + V + V +W Sbjct: 360 MRILMLGLDAAGKTTIL-----------YKLKLGQSVTTIPTVGFNVETVTYKNVKFNVW 408 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 D G ++ + L +Y G + V D + +D R E + R+ + ++ Sbjct: 409 DVGGLDKIRPLWRHYYTGTQGLIFVVDCADRD---RIDEARQELHRIINDREMRDAIILI 465 Query: 123 LGNKIDL 129 NK DL Sbjct: 466 FANKQDL 472 >6D4G-A nrPDB Length = 271 Score = 33.9 bits (76), Expect = 0.054, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 119 PFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 P V++ K D E + + A + SK N+ ETSA+ +NV+ AF T+ + Sbjct: 199 PIVIVLTKCD-EGVERYIRDAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQ 250 >4ZI3-A nrPDB Length = 190 Score = 33.5 bits (75), Expect = 0.065, Method: Compositional matrix adjust. Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 5/81 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +++++LG GKT+L+ Q ++ S+ T F K V + + +WD GQ Sbjct: 18 VRILLLGLDNAGKTTLLKQLASEDISH---ITPTQGFNIKSV--QSQGFKLNVWDIGGQR 72 Query: 69 RFQSLGVAFYRGADCCVLVFD 89 + + +++ D + V D Sbjct: 73 KIRPYWRSYFENTDILIYVID 93 >2B6H-A nrPDB Length = 192 Score = 33.5 bits (75), Expect = 0.068, Method: Compositional matrix adjust. Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 17/155 (10%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++++++G GKT+++ + + TIG + T V+ + + +WD GQ+ Sbjct: 30 MRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVET----VEYKNICFTVWDVGGQD 84 Query: 69 RFQSLGVAFYRGADCCVLVFDV--------TAPNTFKTL--DSWRDE-FLIQASPRD-PE 116 + + L +++ + V D +A K L D RD L+ A+ +D P Sbjct: 85 KIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPN 144 Query: 117 NFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPY 151 P L +K+ L++ + T QA C ++ Y Sbjct: 145 AMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLY 179 >5LAD-A nrPDB Length = 404 Score = 33.5 bits (75), Expect = 0.074, Method: Compositional matrix adjust. Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 23/129 (17%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFS--NQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +++ G VGK+S MN V + S ++Y T D + K + + + + + DT G + Sbjct: 12 IVVAGRRNVGKSSFMNALVGQNVSIVSEYAGTT-TDPVYKSMELYP-VGPVTLVDTPGLD 69 Query: 69 RFQSLG--------VAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 LG FYR ADC +LV D + P ++ D + F PF Sbjct: 70 DVGELGRLRVEKARRVFYR-ADCGILVTD-SEPTPYE--DDVVNLF-------KEMEIPF 118 Query: 121 VVLGNKIDL 129 VV+ NKID+ Sbjct: 119 VVVVNKIDV 127 >1MOZ-A nrPDB Length = 183 Score = 33.1 bits (74), Expect = 0.087, Method: Compositional matrix adjust. Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 20/126 (15%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM------VDDRLVTMQIW 62 L+++ILG G GKT+++ Y+ IG TK + + + + + +W Sbjct: 19 LRILILGLDGAGKTTIL-----------YRLQIGEVVTTKPTIGFNVETLSYKNLKLNVW 67 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 D GQ + +Y + V D T + T E + + ++ +V Sbjct: 68 DLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASK---ELHLMLQEEELQDAALLV 124 Query: 123 LGNKID 128 NK D Sbjct: 125 FANKQD 130 >5IRR-A nrPDB Length = 308 Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust. Identities = 12/26 (46%), Positives = 21/26 (80%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVN 30 KK +K+I++GDSG+GKT+L+ ++ Sbjct: 23 KKKYIKLIVVGDSGLGKTTLIKSLIS 48 >4ARZ-A nrPDB Length = 310 Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 19/136 (13%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFS----NQYKATIGADFLTKEVMVDDRLVT 58 +RKK+LL +G SG GK+S M + +S + ATI + + + +T Sbjct: 5 NRKKLLL----MGRSGSGKSS-MRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN---MT 56 Query: 59 MQIWDTAGQERFQSLGVA-----FYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPR 113 + +WD GQ+ F ++ + VFDV + K ++ + L Q Sbjct: 57 LNLWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKA-LKQLRKY 115 Query: 114 DPENFPFVVLGNKIDL 129 P+ FV+L +K+DL Sbjct: 116 SPDAKIFVLL-HKMDL 130 >3AQ4-A nrPDB Length = 184 Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust. Identities = 26/129 (20%), Positives = 54/129 (41%), Gaps = 20/129 (15%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM------VDDRLVTMQIW 62 ++++++G GKT+++ YK +G T + V+ + ++ +W Sbjct: 21 MRILMVGLDAAGKTTIL-----------YKLKLGEIVTTIPTIGFNVETVEYKNISFTVW 69 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 D GQ++ + L +++ + V D N + RDE + + + +V Sbjct: 70 DVGGQDKIRPLWRHYFQNTQGLIFVVD---SNDRDRVVEARDELHRMLNEDELRDAVLLV 126 Query: 123 LGNKIDLEN 131 NK DL N Sbjct: 127 FANKQDLPN 135 >5UF8-A nrPDB Length = 181 Score = 30.0 bits (66), Expect = 0.73, Method: Compositional matrix adjust. Identities = 25/129 (19%), Positives = 54/129 (41%), Gaps = 20/129 (15%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVM------VDDRLVTMQIW 62 ++++++G GKT+++ YK +G T + V+ + ++ +W Sbjct: 18 MRILMVGLDAAGKTTIL-----------YKLKLGEIVTTIPTIGFNVETVEYKNISFTVW 66 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 D GQ++ + L +++ + V D N + R+E + + + +V Sbjct: 67 DVGGQDKIRPLWRYYFQNTQGIIFVVD---SNDRDRIAEAREELQQMLNEDELRDALLLV 123 Query: 123 LGNKIDLEN 131 NK DL N Sbjct: 124 FANKQDLPN 132 >3BH6-A nrPDB Length = 164 Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust. Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 5/81 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +++++LG GKT+L+ Q ++ S+ T F K V + + +WD G Sbjct: 5 VRILLLGLDNAGKTTLLKQLASEDISH---ITPTQGFNIKSVQ--SQGFKLNVWDIGGLR 59 Query: 69 RFQSLGVAFYRGADCCVLVFD 89 + + +++ D + V D Sbjct: 60 KIRPYWRSYFENTDILIYVID 80 >1YE8-A nrPDB Length = 178 Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust. Identities = 11/23 (47%), Positives = 18/23 (78%) Query: 9 LKVIILGDSGVGKTSLMNQYVNK 31 +K+II G+ GVGKT+L+ + V + Sbjct: 1 MKIIITGEPGVGKTTLVKKIVER 23 >1Z6X-A nrPDB Length = 180 Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust. Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 17/155 (10%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++++++G GKT+++ + + TIG + T V+ + + +WD GQ+ Sbjct: 18 MRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVET----VEYKNICFTVWDVGGQD 72 Query: 69 RFQSLGVAFYRGADCCVLVFDV--------TAPNTFKTL--DSWRDE-FLIQASPRD-PE 116 R + L +++ + V D A K L D RD L+ A+ +D P Sbjct: 73 RIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQDLPN 132 Query: 117 NFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPY 151 + +K+ L++ + T QA C ++ Y Sbjct: 133 AMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLY 167 >5GM6-Y nrPDB Length = 876 Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust. Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%) Query: 11 VIILGDSGVGKTSLMNQY-VNKKFSNQYKATIG 42 +II+G++G GKT+ + QY V F++Q K I Sbjct: 242 LIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIA 274 >1MKY-A nrPDB Length = 439 Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 17/97 (17%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKK--FSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66 +KV I+G VGK++L N +NK+ + T D + EV +D R DTAG Sbjct: 181 IKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTT-RDPVDDEVFIDGRKYVF--VDTAG 237 Query: 67 ---QERFQSLGVAFYRG---------ADCCVLVFDVT 91 + R + V Y AD V+V D T Sbjct: 238 LRRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDAT 274 Score = 26.6 bits (57), Expect = 7.2, Method: Compositional matrix adjust. Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 28/195 (14%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRL----VTMQIWDTAG 66 V+I+G VGK++L N+ V KK KA + + V D + T ++ DT G Sbjct: 4 VLIVGRPNVGKSTLFNKLVKKK-----KAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCG 58 Query: 67 ---------QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPEN 117 ++ + + + R AD + V D D +FL +++ Sbjct: 59 VFDNPQDIISQKMKEVTLNMIREADLVLFVVD--GKRGITKEDESLADFLRKST------ 110 Query: 118 FPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177 +++ NK EN + + + YS SA+ IN++ +TI + ++ Sbjct: 111 VDTILVANK--AENLREFEREVKPELYSLGFGEPIPVSAEHNINLDTMLETIIKKLEEKG 168 Query: 178 TEVELYNEFPEPIKL 192 ++E E + IK+ Sbjct: 169 LDLESKPEITDAIKV 183 >2QAG-B nrPDB Length = 427 Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust. Identities = 9/26 (34%), Positives = 19/26 (73%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQ 36 ++ +G++G+GK++LM+ N KF + Sbjct: 45 ILCVGETGLGKSTLMDTLFNTKFEGE 70 >6CVN-D nrPDB Length = 202 Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust. Identities = 13/45 (28%), Positives = 22/45 (48%) Query: 116 ENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAI 160 +N V G K+ + N+++ Q+ C SK+NI + K I Sbjct: 67 DNIKHVPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGKVQI 111 Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust. Identities = 13/45 (28%), Positives = 22/45 (48%) Query: 116 ENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAI 160 +N V G K+ + N+++ Q+ C SK+NI + K I Sbjct: 98 DNIKHVPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGKVQI 142 Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust. Identities = 12/49 (24%), Positives = 23/49 (46%) Query: 116 ENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQ 164 +N V G K+ + N+++ Q+ C SK+NI + + I + Sbjct: 129 DNIKHVPGGGKVQIINKKLDLSNVQSKCGSKDNIKHVPGGGNKKIETHK 177 >5LIZ-A nrPDB Length = 610 Score = 28.1 bits (61), Expect = 3.1, Method: Compositional matrix adjust. Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 20/95 (21%) Query: 120 FVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFE------------TSAKEAINVEQAFQ 167 F++LGN ++ +N V + Q ++ N P E T++K A + + Sbjct: 431 FIILGNALEYKNNFVIDEELQPVTHAAGNQPDMEIIYEDFIVLGEVTTSKGATQFKMESE 490 Query: 168 TIARNAL-------KQETEVELYNEFPEPIKLDKN 195 + R+ L KQ E ELY+ F P +++KN Sbjct: 491 PVTRHYLNKKKELEKQGVEKELYSLFIAP-EINKN 524 >1HEY-A nrPDB Length = 128 Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust. Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 LK +++G+ G GK+++ N F+N A G D L K + + W+ + Sbjct: 5 LKFLVVGNGGTGKSTVRNLLKELGFNNVEDAEDGVDALNK-LQAGGYGFVISDWNMPNMD 63 Query: 69 RFQSLGVAFYRGADCCVLVFDVTA 92 + L GA + V VTA Sbjct: 64 GLELLKTIRADGAMSALPVLMVTA 87 >1KKT-A nrPDB Length = 511 Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust. Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 5/101 (4%) Query: 89 DVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNN 148 D+T + L + +L++ P E FP +V G+ I++ + Q A R ++ + Sbjct: 211 DLTGDEEYAKLSQKAESYLLKPQPSSSEPFPGLV-GSSININDGQFADSRV---SWNGGD 266 Query: 149 IPYFETSAKEAINVEQAFQTIA-RNALKQETEVELYNEFPE 188 ++E K + + F+T R L E+ ++ P+ Sbjct: 267 DSFYEYLIKMYVYDPKRFETYKDRWVLAAESTIKHLKSHPK 307 >4KV9-A nrPDB Length = 412 Score = 27.3 bits (59), Expect = 4.7, Method: Compositional matrix adjust. Identities = 8/23 (34%), Positives = 18/23 (78%) Query: 11 VIILGDSGVGKTSLMNQYVNKKF 33 ++ +G++G+GK++L+ N+KF Sbjct: 44 ILCVGETGIGKSTLLETLFNQKF 66 >1FP7-A nrPDB Length = 557 Score = 27.3 bits (59), Expect = 4.7, Method: Compositional matrix adjust. Identities = 14/31 (45%), Positives = 17/31 (54%) Query: 169 IARNALKQETEVELYNEFPEPIKLDKNERAK 199 +AR QE EVELY ++ I LD R K Sbjct: 22 LARGLGIQEDEVELYGKYKAKISLDVYRRLK 52 >5DE3-A nrPDB Length = 169 Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust. Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 12/122 (9%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGA--DFLTKEVMVDDRLVTMQIWDTAGQ 67 ++++LG GKT+++ K S + TI F K + D ++IWD GQ Sbjct: 2 RILVLGLDNAGKTTIL-----KALSEEDITTITPTQGFNIKSLSRDG--FNLKIWDIGGQ 54 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 + + ++ D + V D + E L P +V NK Sbjct: 55 KSIRPYWRNYFDQTDALIYVIDSADSKRLSESEFELTELL---QEEKMTGVPLLVFANKQ 111 Query: 128 DL 129 DL Sbjct: 112 DL 113 >2DYK-A nrPDB Length = 161 Score = 26.9 bits (58), Expect = 6.1, Method: Compositional matrix adjust. Identities = 11/23 (47%), Positives = 17/23 (73%) Query: 10 KVIILGDSGVGKTSLMNQYVNKK 32 KV+I+G VGK+SL N+ + K+ Sbjct: 3 KVVIVGRPNVGKSSLFNRLLKKR 25 >2MYS-A nrPDB Length = 843 Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust. Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 6/33 (18%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGA 43 ++I G+SG GKT VN K QY ATI A Sbjct: 175 ILITGESGAGKT------VNTKRVIQYFATIAA 201 >3HSI-A nrPDB Length = 458 Score = 26.6 bits (57), Expect = 8.2, Method: Compositional matrix adjust. Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 2/30 (6%) Query: 173 ALKQETEVELYNEFPEPIK--LDKNERAKA 200 LK TE+E N++PEP++ L K R KA Sbjct: 421 VLKHYTELEELNQYPEPVQKLLKKFARIKA 450 >5JXW-A nrPDB Length = 498 Score = 26.6 bits (57), Expect = 8.6, Method: Compositional matrix adjust. Identities = 12/39 (30%), Positives = 19/39 (48%) Query: 169 IARNALKQETEVELYNEFPEPIKLDKNERAKASAESCSC 207 I +K E E E YN+ PE ++ + +E K + C Sbjct: 147 ILHEGVKAEIEYEKYNKIPEYLETELDENGKQLSMDLKC 185 >6CY1-A nrPDB Length = 329 Score = 26.2 bits (56), Expect = 9.2, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 21/128 (16%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERF 70 ++++G +GVGKT+ + + ++ S K +GA + VD + IW ER Sbjct: 126 IMVVGVNGVGKTTTIGKLAHQFKSEGLKVVLGAADTFRAAAVDQ----LVIW----SERV 177 Query: 71 QSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLE 130 V G+D + FD + D +I + R L NK++L Sbjct: 178 GVPIVKQAMGSDPASVAFDTVQSAVSQDADV----VIIDTAGR---------LHNKVNLM 224 Query: 131 NRQVATKR 138 N KR Sbjct: 225 NELSKIKR 232 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6IYB-A nrPDB 278 1e-75 5LDD-C nrPDB 256 4e-69 4QXA-A nrPDB 240 2e-64 2OCB-A nrPDB 237 3e-63 5SZI-A nrPDB 236 5e-63 5SZH-B nrPDB 236 6e-63 1WMS-A nrPDB 235 7e-63 3L0I-B nrPDB 230 2e-61 2RHD-A nrPDB 230 3e-61 3CUE-F nrPDB 229 9e-61 4PHF-A nrPDB 224 2e-59 5FBL-B nrPDB 224 3e-59 2WWX-A nrPDB 224 3e-59 4LHX-A nrPDB 224 3e-59 5SZJ-A nrPDB 222 6e-59 1YZN-A nrPDB 220 3e-58 5LPN-A nrPDB 220 5e-58 2A5J-A nrPDB 219 7e-58 2IEZ-A nrPDB 218 1e-57 2F7S-A nrPDB 218 2e-57 1Z0A-A nrPDB 217 3e-57 1X3S-A nrPDB 217 3e-57 3CPH-A nrPDB 214 3e-56 4RKE-A nrPDB 212 1e-55 6IF2-B nrPDB 211 1e-55 3CPJ-B nrPDB 211 1e-55 2F9L-A nrPDB 211 2e-55 2BMD-A nrPDB 211 2e-55 4UJ4-A nrPDB 210 3e-55 1ZBD-A nrPDB 210 3e-55 5UB8-A nrPDB 210 3e-55 2EW1-A nrPDB 210 4e-55 2J0V-A nrPDB 210 4e-55 2G6B-A nrPDB 209 5e-55 2HEI-A nrPDB 209 7e-55 1Z0F-A nrPDB 209 7e-55 2OCY-C nrPDB 209 8e-55 2O52-A nrPDB 208 9e-55 6O62-A nrPDB 208 1e-54 2GF9-A nrPDB 208 2e-54 3RAB-A nrPDB 207 3e-54 1TU4-A nrPDB 207 3e-54 3DZ8-A nrPDB 205 9e-54 4G01-B nrPDB 205 1e-53 4RKF-A nrPDB 205 1e-53 4CZ2-A nrPDB 205 1e-53 2IEY-A nrPDB 204 2e-53 6HUF-A nrPDB 203 3e-53 2HUP-A nrPDB 203 4e-53 5XR6-A nrPDB 203 5e-53 5LEF-A nrPDB 203 5e-53 4KYI-B nrPDB 203 6e-53 3BFK-A nrPDB 202 1e-52 3RWM-B nrPDB 200 5e-52 3BC1-A nrPDB 199 7e-52 5YOZ-A nrPDB 198 1e-51 3TSO-A nrPDB 198 1e-51 4M8N-E nrPDB 198 2e-51 2G77-B nrPDB 198 2e-51 2FG5-A nrPDB 197 2e-51 1Z06-A nrPDB 197 3e-51 2FFQ-A nrPDB 196 5e-51 2IL1-A nrPDB 194 2e-50 5CM8-B nrPDB 193 4e-50 1EK0-A nrPDB 193 5e-50 4DXA-A nrPDB 193 5e-50 1D5C-A nrPDB 192 7e-50 4KLZ-A nrPDB 192 9e-50 5ZHX-e nrPDB 192 9e-50 1YVD-A nrPDB 192 9e-50 5C2K-A nrPDB 192 1e-49 2GIL-A nrPDB 191 2e-49 1YZU-A nrPDB 190 4e-49 5UWI-A nrPDB 188 1e-48 2N1B-A nrPDB 188 1e-48 5CLL-A nrPDB 188 1e-48 2WBL-C nrPDB 188 2e-48 3TH5-A nrPDB 187 2e-48 5JCP-B nrPDB 187 4e-48 1Z22-A nrPDB 187 4e-48 2J1L-A nrPDB 186 5e-48 2FV8-A nrPDB 185 9e-48 2NTY-C nrPDB 185 1e-47 3RYT-C nrPDB 185 1e-47 1ZC4-A nrPDB 185 1e-47 2KE5-A nrPDB 184 2e-47 3WYF-A nrPDB 184 2e-47 4WA7-A nrPDB 184 2e-47 4U5X-A nrPDB 184 2e-47 5XOJ-A nrPDB 183 3e-47 4KU4-A nrPDB 183 4e-47 3BWD-D nrPDB 183 4e-47 3CON-A nrPDB 183 4e-47 5WDR-A nrPDB 182 7e-47 5UHV-A nrPDB 182 9e-47 2WKQ-A nrPDB 182 1e-46 2W2X-A nrPDB 182 1e-46 6FF8-A nrPDB 182 1e-46 5WDQ-A nrPDB 181 2e-46 2P5S-A nrPDB 180 4e-46 3A58-B nrPDB 178 2e-45 1RYH-A nrPDB 177 4e-45 2FN4-A nrPDB 176 8e-45 3CBQ-A nrPDB 175 2e-44 2ERY-A nrPDB 173 4e-44 2ATX-A nrPDB 173 5e-44 5ZVP-A nrPDB 173 6e-44 5VCU-A nrPDB 173 6e-44 2ERX-A nrPDB 172 8e-44 4FMC-F nrPDB 172 8e-44 3PIR-A nrPDB 172 1e-43 4MIT-A nrPDB 171 2e-43 3VHL-B nrPDB 171 2e-43 4DJT-A nrPDB 169 6e-43 2ATV-A nrPDB 167 4e-42 2Q3H-A nrPDB 166 6e-42 2G3Y-A nrPDB 166 8e-42 3T5G-A nrPDB 165 1e-41 3Q85-A nrPDB 165 1e-41 3RAP-R nrPDB 165 2e-41 2CJW-A nrPDB 163 3e-41 3Q72-A nrPDB 162 1e-40 3OES-A nrPDB 160 3e-40 3E5H-A nrPDB 160 4e-40 2GF0-A nrPDB 158 2e-39 3CLV-A nrPDB 158 2e-39 2NZJ-A nrPDB 156 6e-39 1GWN-A nrPDB 156 8e-39 5XC3-A nrPDB 155 1e-38 3REG-A nrPDB 155 1e-38 1M7B-A nrPDB 152 9e-38 3C5C-A nrPDB 137 3e-33 2AL7-A nrPDB 136 4e-33 4ILE-A nrPDB 135 1e-32 5C1S-A nrPDB 131 2e-31 5HZH-A nrPDB 128 1e-30 3IHW-A nrPDB 127 4e-30 2YC4-C nrPDB 126 9e-30 2REX-B nrPDB 124 2e-29 2IWR-A nrPDB 121 3e-28 4WNR-A nrPDB 117 3e-27 5NZV-F nrPDB 117 3e-27 3LRP-A nrPDB 113 8e-26 1YZG-A nrPDB 108 2e-24 3DPU-A nrPDB 108 2e-24 2H16-A nrPDB 106 7e-24 3D6T-B nrPDB 105 1e-23 2LKD-A nrPDB 90 7e-19 6IAE-A nrPDB 88 3e-18 3GEH-A nrPDB 78 2e-15 5KH0-A nrPDB 75 3e-14 1G7S-A nrPDB 73 1e-13 Sequences not found previously or not previously below threshold: 4YLG-A nrPDB 111 2e-25 6FAE-B nrPDB 110 4e-25 3O47-A nrPDB 110 5e-25 5EE5-B nrPDB 110 5e-25 5UF8-A nrPDB 110 7e-25 6HLU-A nrPDB 110 7e-25 1Z6X-A nrPDB 108 2e-24 6DFF-C nrPDB 108 2e-24 1J2J-A nrPDB 108 3e-24 3AQ4-A nrPDB 106 5e-24 3LVQ-E nrPDB 104 2e-23 2B6H-A nrPDB 104 3e-23 2A5F-A nrPDB 103 5e-23 6BBQ-A nrPDB 101 2e-22 1MOZ-A nrPDB 95 2e-20 4ZI3-A nrPDB 93 8e-20 3BH6-A nrPDB 89 1e-18 1KSG-A nrPDB 87 5e-18 5DE3-A nrPDB 87 7e-18 2X77-A nrPDB 83 7e-17 2H57-A nrPDB 83 8e-17 4V0N-A nrPDB 82 2e-16 1M2O-B nrPDB 76 1e-14 6GNI-B nrPDB 75 2e-14 4BAS-A nrPDB 73 7e-14 5DI3-B nrPDB 73 1e-13 4M9Q-A nrPDB 73 1e-13 3T1O-A nrPDB 73 1e-13 2GAO-A nrPDB 71 4e-13 1F6B-A nrPDB 70 1e-12 4B44-A nrPDB 69 2e-12 4KJZ-A nrPDB 68 2e-12 3J4J-A nrPDB 68 3e-12 4C0K-A nrPDB 68 3e-12 2GJ9-A nrPDB 68 3e-12 2E87-A nrPDB 67 4e-12 6GB2-BC nrPDB 67 6e-12 5YT0-A nrPDB 66 1e-11 3IZY-P nrPDB 66 2e-11 5FG3-A nrPDB 65 2e-11 5LAD-A nrPDB 65 2e-11 1WF3-A nrPDB 65 3e-11 5YMX-A nrPDB 64 4e-11 3J8G-X nrPDB 64 6e-11 5IMR-C nrPDB 62 2e-10 5J8B-z nrPDB 62 2e-10 6GDG-D nrPDB 62 2e-10 1ZO1-I nrPDB 62 2e-10 3JCN-b nrPDB 61 4e-10 3CB4-D nrPDB 61 4e-10 1MKY-A nrPDB 59 1e-09 6CES-A nrPDB 59 2e-09 3IEU-A nrPDB 58 2e-09 2YWH-A nrPDB 58 2e-09 1XZP-A nrPDB 58 4e-09 2DYK-A nrPDB 58 4e-09 4TN1-B nrPDB 57 5e-09 4NCL-A nrPDB 57 5e-09 5DN8-A nrPDB 57 6e-09 4N3G-A nrPDB 57 6e-09 4ZU9-A nrPDB 56 1e-08 2CXX-A nrPDB 56 1e-08 3R9W-A nrPDB 55 3e-08 6G79-A nrPDB 54 4e-08 4V7F-o nrPDB 54 4e-08 4V8Y-CP nrPDB 54 5e-08 3A1W-A nrPDB 54 5e-08 4NCF-A nrPDB 53 7e-08 3A1U-A nrPDB 53 8e-08 3WBI-A nrPDB 53 8e-08 4V8Z-CV nrPDB 53 8e-08 6D4G-A nrPDB 53 9e-08 3C5H-A nrPDB 53 9e-08 4UJC-AB nrPDB 52 1e-07 4ARZ-A nrPDB 52 2e-07 5ZZM-A nrPDB 51 3e-07 3K53-A nrPDB 50 7e-07 3LLU-A nrPDB 50 7e-07 2Q3F-A nrPDB 49 2e-06 4AC9-A nrPDB 48 2e-06 3GEE-A nrPDB 48 2e-06 6CES-C nrPDB 48 2e-06 1LNZ-A nrPDB 48 3e-06 3PR1-A nrPDB 47 6e-06 5H7J-A nrPDB 47 7e-06 3WXM-A nrPDB 46 8e-06 5H7K-A nrPDB 46 1e-05 5KUT-A nrPDB 46 1e-05 4DCU-A nrPDB 46 1e-05 3V00-C nrPDB 45 2e-05 3JB9-B nrPDB 45 3e-05 5KU1-A nrPDB 45 3e-05 2WJG-A nrPDB 45 3e-05 2P8Y-T nrPDB 45 3e-05 5KSO-A nrPDB 44 4e-05 5X4B-A nrPDB 44 4e-05 3FTQ-A nrPDB 44 4e-05 1UDX-A nrPDB 44 4e-05 1EFM-A nrPDB 44 5e-05 6ID0-C nrPDB 44 5e-05 2QAG-A nrPDB 44 5e-05 2QU8-A nrPDB 43 7e-05 2GTP-A nrPDB 43 7e-05 4WQY-BZ nrPDB 43 8e-05 3P27-A nrPDB 43 8e-05 3IZQ-1 nrPDB 43 9e-05 1ZUN-B nrPDB 43 9e-05 2WJI-A nrPDB 43 1e-04 1R5O-A nrPDB 43 1e-04 4V6V-A1 nrPDB 43 1e-04 5CYO-A nrPDB 42 2e-04 3MCA-A nrPDB 42 2e-04 3T5D-A nrPDB 42 2e-04 1TAG-A nrPDB 42 2e-04 3TR5-A nrPDB 42 2e-04 3PEN-A nrPDB 42 2e-04 4V89-AW nrPDB 42 2e-04 5A9Z-CA nrPDB 41 3e-04 2QTH-A nrPDB 41 4e-04 4R98-A nrPDB 41 4e-04 2QAG-C nrPDB 41 4e-04 1JNY-A nrPDB 41 5e-04 5LZD-z nrPDB 40 6e-04 1SHZ-A nrPDB 40 6e-04 4CSU-9 nrPDB 40 0.001 3W5J-A nrPDB 39 0.001 1SUL-A nrPDB 39 0.001 6O81-S nrPDB 39 0.001 5VAI-A nrPDB 39 0.001 6FEC-S nrPDB 39 0.001 2ODE-A nrPDB 39 0.001 5IRR-A nrPDB 39 0.001 2D74-A nrPDB 39 0.002 1S0U-A nrPDB 39 0.002 5W7Q-A nrPDB 39 0.002 5LZY-jj nrPDB 38 0.002 5TY0-A nrPDB 38 0.002 4Z54-A nrPDB 38 0.002 6OIK-A nrPDB 38 0.002 5M04-A nrPDB 38 0.003 3MMP-A nrPDB 38 0.003 1PUJ-A nrPDB 38 0.003 1U0L-A nrPDB 38 0.003 1ZCB-A nrPDB 38 0.003 4V5G-AZ nrPDB 38 0.003 1HEY-A nrPDB 38 0.004 5KCS-1w nrPDB 38 0.004 5AR1-A nrPDB 38 0.004 5W75-A nrPDB 38 0.004 3LX8-A nrPDB 38 0.004 4V6W-Az nrPDB 38 0.004 4ZKD-A nrPDB 37 0.005 4HI0-E nrPDB 37 0.005 6MTD-v nrPDB 37 0.006 4ZV4-A nrPDB 37 0.006 4J0Q-A nrPDB 37 0.006 4FID-A nrPDB 37 0.007 6D9H-A nrPDB 37 0.007 5LZT-jj nrPDB 36 0.008 5G06-P nrPDB 36 0.010 2OHF-A nrPDB 36 0.015 3J81-k nrPDB 35 0.018 3EC1-A nrPDB 35 0.019 4D61-i nrPDB 35 0.019 6BK7-A nrPDB 35 0.020 6MIJ-A nrPDB 35 0.022 5EE0-A nrPDB 35 0.023 6N0I-A nrPDB 35 0.023 5TV2-A nrPDB 35 0.023 6NOT-A nrPDB 35 0.025 4U00-A nrPDB 35 0.025 1MJ1-A nrPDB 35 0.028 2WIC-A nrPDB 35 0.030 1H65-A nrPDB 35 0.030 4V7D-BZ nrPDB 35 0.031 5NON-A nrPDB 35 0.032 2VNE-A nrPDB 35 0.032 4KV9-A nrPDB 35 0.033 5W76-A nrPDB 35 0.033 3H2Y-A nrPDB 35 0.035 6FT6-s nrPDB 34 0.038 5DGX-A nrPDB 34 0.041 1NI3-A nrPDB 34 0.045 5VH6-A nrPDB 34 0.048 1WDT-A nrPDB 34 0.049 1ZCA-A nrPDB 34 0.063 4QJ3-A nrPDB 34 0.063 3DEF-A nrPDB 33 0.066 2BCJ-Q nrPDB 33 0.069 3VQT-A nrPDB 33 0.074 1IY1-A nrPDB 33 0.077 4YMS-J nrPDB 33 0.083 6HZK-A nrPDB 33 0.088 2DHR-A nrPDB 33 0.090 1YE8-A nrPDB 33 0.094 6OIJ-A nrPDB 33 0.094 6G12-A nrPDB 33 0.10 1JAL-A nrPDB 33 0.10 1WXQ-A nrPDB 33 0.11 5IDV-A nrPDB 33 0.11 4LV5-B nrPDB 33 0.13 4FN5-A nrPDB 33 0.13 6HA8-V nrPDB 32 0.14 2OUK-A nrPDB 32 0.14 4Z8X-A nrPDB 32 0.15 3V70-A nrPDB 32 0.16 5NKM-B nrPDB 32 0.17 2YYZ-A nrPDB 32 0.20 3GD7-A nrPDB 32 0.22 6B8D-A nrPDB 32 0.23 3ZZ0-A nrPDB 32 0.23 2HDN-B nrPDB 31 0.25 4FIN-A nrPDB 31 0.25 5OCH-A nrPDB 31 0.25 2YV5-A nrPDB 31 0.25 2PJZ-A nrPDB 31 0.27 3B5X-A nrPDB 31 0.28 3TK1-A nrPDB 31 0.30 4MKI-B nrPDB 31 0.31 2QAG-B nrPDB 31 0.32 1QZX-A nrPDB 31 0.33 3ZJC-A nrPDB 31 0.34 6C2V-A nrPDB 31 0.36 5B3F-A nrPDB 31 0.38 5JSZ-B nrPDB 31 0.39 5C78-A nrPDB 31 0.39 4N1A-A nrPDB 31 0.41 4MYH-A nrPDB 31 0.42 5L3S-A nrPDB 31 0.43 2NQL-A nrPDB 31 0.46 2I3B-A nrPDB 31 0.46 2IW3-A nrPDB 31 0.46 4MRS-A nrPDB 31 0.47 2IT1-A nrPDB 31 0.51 5ZLU-EE nrPDB 30 0.55 5OWV-A nrPDB 30 0.57 6QUZ-B nrPDB 30 0.59 1YR7-A nrPDB 30 0.59 5B57-C nrPDB 30 0.60 3R7W-B nrPDB 30 0.61 3FVQ-A nrPDB 30 0.63 2R65-A nrPDB 30 0.70 2FGK-A nrPDB 30 0.70 1R6B-X nrPDB 30 0.72 3PV0-A nrPDB 30 0.75 5OFO-C nrPDB 30 0.77 1LV7-A nrPDB 30 0.81 1JBK-A nrPDB 30 0.81 4CIU-A nrPDB 30 0.82 5NIK-J nrPDB 30 0.86 5LJA-A nrPDB 30 0.86 4RY2-A nrPDB 30 0.88 6H7G-A nrPDB 30 0.88 3VAA-A nrPDB 30 0.89 2W6D-A nrPDB 30 0.91 5GKO-A nrPDB 29 0.94 4Q7L-A nrPDB 29 0.95 6F1T-i nrPDB 29 0.97 4YPL-A nrPDB 29 0.98 6BZR-B nrPDB 29 0.98 4A9A-A nrPDB 29 0.98 4HUQ-A nrPDB 29 1.1 5MRE-WW nrPDB 29 1.1 4XGC-D nrPDB 29 1.1 2WWW-A nrPDB 29 1.1 4HZI-A nrPDB 29 1.1 3VX4-A nrPDB 29 1.2 4YPN-A nrPDB 29 1.2 5MKK-A nrPDB 29 1.2 2DBY-A nrPDB 29 1.2 6I3O-A nrPDB 29 1.3 3LXX-A nrPDB 29 1.3 2XTZ-A nrPDB 29 1.3 1QVR-A nrPDB 29 1.3 6BZS-A nrPDB 29 1.3 6CS8-A nrPDB 29 1.3 2GZA-A nrPDB 29 1.4 2IYT-A nrPDB 29 1.4 5L22-B nrPDB 29 1.4 2B7C-A nrPDB 29 1.5 4C3Z-A nrPDB 29 1.5 2CBZ-A nrPDB 29 1.5 6F1Y-j nrPDB 29 1.5 4IXM-A nrPDB 29 1.6 3PXG-A nrPDB 29 1.6 6IC4-I nrPDB 29 1.6 3J3U-A nrPDB 29 1.6 4MJX-A nrPDB 29 1.6 6QUZ-A nrPDB 29 1.7 3PXI-A nrPDB 29 1.7 3L43-A nrPDB 29 1.8 2AKA-B nrPDB 29 1.8 6ED3-A nrPDB 29 1.9 1LVG-A nrPDB 29 1.9 2X2E-A nrPDB 29 1.9 4UUD-B nrPDB 29 2.0 5GAD-l nrPDB 29 2.0 2PZF-A nrPDB 29 2.0 5D4W-A nrPDB 29 2.0 5LKM-A nrPDB 28 2.1 4HSE-A nrPDB 28 2.1 4G1U-C nrPDB 28 2.1 4XGC-E nrPDB 28 2.1 4WZ6-A nrPDB 28 2.2 4Q7K-A nrPDB 28 2.2 6DJQ-A nrPDB 28 2.2 6AN5-A nrPDB 28 2.2 4A2I-V nrPDB 28 2.2 5NO4-Z nrPDB 28 2.4 5GM6-Y nrPDB 28 2.4 4F4J-A nrPDB 28 2.4 5CA8-A nrPDB 28 2.5 5A3F-A nrPDB 28 2.5 2GHI-A nrPDB 28 2.5 6G2G-A nrPDB 28 2.6 3ZQJ-A nrPDB 28 2.6 2QEN-A nrPDB 28 2.6 5TV4-A nrPDB 28 2.6 3CNO-A nrPDB 28 2.7 2ZBL-A nrPDB 28 2.7 2D62-A nrPDB 28 2.7 6DLV-b nrPDB 28 2.7 2YKR-W nrPDB 28 2.7 2P65-A nrPDB 28 2.7 3EC2-A nrPDB 28 2.8 2DR3-A nrPDB 28 2.8 5Z1X-A nrPDB 28 2.8 2XSZ-A nrPDB 28 2.8 6EMW-E nrPDB 28 2.9 1V43-A nrPDB 28 2.9 6FA9-A nrPDB 28 3.0 5XU1-A nrPDB 28 3.1 3WMF-A nrPDB 28 3.1 6EM8-A nrPDB 28 3.1 4DBL-C nrPDB 28 3.1 5AVO-A nrPDB 28 3.2 2PCL-A nrPDB 28 3.2 5LJ6-A nrPDB 28 3.3 1HQC-A nrPDB 28 3.4 1JJV-A nrPDB 28 3.4 5DO7-A nrPDB 28 3.5 5EUM-A nrPDB 28 3.5 3OZX-A nrPDB 28 3.5 3NHB-A nrPDB 28 3.5 3LLM-A nrPDB 28 3.7 6QI8-A nrPDB 28 3.8 2OCP-A nrPDB 28 3.8 6MAT-A nrPDB 28 3.8 >6IYB-A nrPDB Length = 199 Score = 278 bits (711), Expect = 1e-75, Method: Composition-based stats. Identities = 192/194 (98%), Positives = 192/194 (98%), Gaps = 1/194 (0%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 61 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI Sbjct: 7 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 66 Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121 WDTAG ERFQS GVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV Sbjct: 67 WDTAGLERFQS-GVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 125 Query: 122 VLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVE 181 VLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVE Sbjct: 126 VLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVE 185 Query: 182 LYNEFPEPIKLDKN 195 LYNEFPEPIKLDKN Sbjct: 186 LYNEFPEPIKLDKN 199 >5LDD-C nrPDB Length = 207 Score = 256 bits (655), Expect = 4e-69, Method: Composition-based stats. Identities = 156/209 (74%), Positives = 171/209 (81%), Gaps = 6/209 (2%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M+SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFS YKATIGADFLT+EVMVDDR VTMQ Sbjct: 3 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQ 62 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 +WDTAGQERFQSLGVAFYRGADCCVLVFDV +F LDSWRDEFLIQASPRDPENFPF Sbjct: 63 LWDTAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDEFLIQASPRDPENFPF 122 Query: 121 VVLGNKIDLEN--RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQET 178 VVLG KID+E R ++TKRAQ +C SK IPYFETSAKEAINVE+AFQ IARNAL QE Sbjct: 123 VVLGIKIDVEESKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNALMQEE 182 Query: 179 EVELYNEFPEPIKLDKNERAKASAESCSC 207 E +F +PI + + + C+C Sbjct: 183 SEEFSGDFQDPINIH----IENERDGCAC 207 >4QXA-A nrPDB Length = 208 Score = 240 bits (614), Expect = 2e-64, Method: Composition-based stats. Identities = 99/203 (48%), Positives = 134/203 (66%), Gaps = 1/203 (0%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M + K L K+I+LGD GVGK+SLMN+YV KF +Q TIG +FL K++ VD VTMQ Sbjct: 1 MMAGKSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQ 60 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 IWDTAG ERF+SL FYRG+DCC+L F V +F+ L +W+ EF+ A ++PE+FPF Sbjct: 61 IWDTAGLERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPF 120 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180 V+LGNK D++ RQV+T+ AQAWC + PYFETSAK++ NV AF+ R L E Sbjct: 121 VILGNKTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRS 180 Query: 181 ELYNEFPEPIKLDKNERAKASAE 203 E + + + L + + +S E Sbjct: 181 EHLIQT-DTVNLHRKPKPNSSLE 202 >2OCB-A nrPDB Length = 180 Score = 237 bits (604), Expect = 3e-63, Method: Composition-based stats. Identities = 100/180 (55%), Positives = 127/180 (70%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 61 S K +LLKVI+LGD GVGK+SLMN+YV KF +Q TIG +FL +++ VD R VT+QI Sbjct: 1 GSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQI 60 Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121 WDTAGQERF+SL FYRGADCC+L F V +F+ L +W+ EF+ A +DPE+FPFV Sbjct: 61 WDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFV 120 Query: 122 VLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVE 181 VLGNK+D E+RQV T+ AQ WC + PY ETSAK+ NV AF+ R L E ++E Sbjct: 121 VLGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQLE 180 >5SZI-A nrPDB Length = 209 Score = 236 bits (602), Expect = 5e-63, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 119/210 (56%), Gaps = 9/210 (4%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M L K++++GDSGVGKT ++ ++ F++ + +TIG DF + + +D + + +Q Sbjct: 3 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 62 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 IWDTAGQERF+++ A+YRGA +LV+D+T +F + +W AS + Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASA----DVEK 118 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180 ++LGNK D+ +++ +K I + ETSAK INVE AF T+AR+ K + + Sbjct: 119 MILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDI-KAKMDK 177 Query: 181 ELYNEFP----EPIKLDKNERAKASAESCS 206 +L P + +K+ +++ ++S C Sbjct: 178 KLEGNSPQGSNQGVKITPDQQKRSSFFRCV 207 >5SZH-B nrPDB Length = 203 Score = 236 bits (602), Expect = 6e-63, Method: Composition-based stats. Identities = 70/205 (34%), Positives = 109/205 (53%), Gaps = 4/205 (1%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + + +D + + +Q Sbjct: 3 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 62 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 IWDTAGQERF+++ ++YRGA ++V+DVT ++ + W E AS EN Sbjct: 63 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYAS----ENVNK 118 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180 +++GNK DL ++V IP+ ETSAK A NVEQAF T+A K+ Sbjct: 119 LLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPG 178 Query: 181 ELYNEFPEPIKLDKNERAKASAESC 205 +K+D A C Sbjct: 179 AASGGERPNLKIDSTPVKPAGGGCC 203 >1WMS-A nrPDB Length = 177 Score = 235 bits (601), Expect = 7e-63, Method: Composition-based stats. Identities = 98/177 (55%), Positives = 123/177 (69%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 61 + K L KVI+LGD GVGK+SLMN+YV KF Q TIG +FL K++ VD VTMQI Sbjct: 1 MAGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQI 60 Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121 WDTAGQERF+SL FYRG+DCC+L F V +F+ L +W+ EF+ A ++PE+FPFV Sbjct: 61 WDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFV 120 Query: 122 VLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQET 178 +LGNKID+ RQV+T+ AQAWC + PYFETSAK+A NV AF+ R L E Sbjct: 121 ILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATED 177 >3L0I-B nrPDB Length = 199 Score = 230 bits (588), Expect = 2e-61, Method: Composition-based stats. Identities = 66/177 (37%), Positives = 103/177 (58%), Gaps = 4/177 (2%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + + +D + + +Q Sbjct: 26 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 85 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 IWDTAGQERF+++ ++YRGA ++V+DVT +F + W E AS EN Sbjct: 86 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAS----ENVNK 141 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177 +++GNK DL ++V IP+ ETSAK A NVEQ+F T+A K+ Sbjct: 142 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 198 >2RHD-A nrPDB Length = 175 Score = 230 bits (587), Expect = 3e-61, Method: Composition-based stats. Identities = 66/176 (37%), Positives = 107/176 (60%), Gaps = 4/176 (2%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + + ++++ V +Q Sbjct: 2 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQ 61 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 IWDTAGQERF+++ ++YRGA ++V+DVT ++F + W E A EN Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYA----MENVNK 117 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 +++GNK DL +++V T + I + ETSAK A NVEQAF T+A K+ Sbjct: 118 LLVGNKCDLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEIKKR 173 >3CUE-F nrPDB Length = 206 Score = 229 bits (583), Expect = 9e-61, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 111/210 (52%), Gaps = 9/210 (4%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M S L K++++G+SGVGK+ L+ ++ + ++N Y +TIG DF K V +D + V +Q Sbjct: 1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQ 60 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 IWDTAGQERF+++ ++YRG+ ++V+DVT +F + W E A Sbjct: 61 IWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYA----TSTVLK 116 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180 +++GNK DL++++V N +P+ ETSA ++ NVE AF T+AR + ++ Sbjct: 117 LLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQ 176 Query: 181 EL-----YNEFPEPIKLDKNERAKASAESC 205 L E + L C Sbjct: 177 NLNETTQKKEDKGNVNLKGQSLTNTGGGCC 206 >4PHF-A nrPDB Length = 184 Score = 224 bits (572), Expect = 2e-59, Method: Composition-based stats. Identities = 123/181 (67%), Positives = 144/181 (79%), Gaps = 3/181 (1%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLV-TM 59 M+SRKK +LKVIILGDSGVGKTSLM++YVN K+S QYKATIGADFLTKEV VD V TM Sbjct: 3 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVATM 62 Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119 Q+WDTAGQERFQSLGVAFYRGADCCVLV+DVT ++F+ + SWRDEFL+ A+ PE FP Sbjct: 63 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFP 122 Query: 120 FVVLGNKIDLENRQ--VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177 FV+LGNKID E + V+ K AQ S +IP F TSAK AINV+ AF+ IAR+AL+Q Sbjct: 123 FVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQN 182 Query: 178 T 178 Sbjct: 183 Q 183 >5FBL-B nrPDB Length = 221 Score = 224 bits (570), Expect = 3e-59, Method: Composition-based stats. Identities = 71/212 (33%), Positives = 119/212 (56%), Gaps = 15/212 (7%) Query: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63 L KV+++GDSGVGK++L++++ +F+ + K+TIG +F T+ + VD + + QIWD Sbjct: 12 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 71 Query: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123 TAGQER++++ A+YRGA +LV+D+ T++ ++ W E A N +++ Sbjct: 72 TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLV 127 Query: 124 GNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVEL 182 GNK DL + R V T A+A+ KN + + ETSA ++ NVE AFQTI + ++ ++ Sbjct: 128 GNKSDLRHLRAVPTDEARAFA-EKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 186 Query: 183 YN---------EFPEPIKLDKNERAKASAESC 205 + PI + K + C Sbjct: 187 SDRRENDMSPSNNVVPIHVPPTTENKPKVQCC 218 >2WWX-A nrPDB Length = 175 Score = 224 bits (570), Expect = 3e-59, Method: Composition-based stats. Identities = 65/177 (36%), Positives = 102/177 (57%), Gaps = 4/177 (2%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + + +D + + +Q Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 IWDTAGQERF+++ ++YRGA ++V+DVT +F + W E AS EN Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAS----ENVNK 116 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177 +++G K DL ++V IP+ ETSAK A NVEQ+F T+A K+ Sbjct: 117 LLVGIKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 173 >4LHX-A nrPDB Length = 186 Score = 224 bits (570), Expect = 3e-59, Method: Composition-based stats. Identities = 66/189 (34%), Positives = 109/189 (57%), Gaps = 5/189 (2%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M L K++++GDSGVGKT ++ ++ F++ + +TIG DF + + +D + + +Q Sbjct: 3 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 62 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 IWDTAGQERF+++ A+YRGA +LV+D+T +F + +W AS + Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASA----DVEK 118 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180 ++LGNK D+ +++ +K I + ETSAK INVE AF T+AR+ K + + Sbjct: 119 MILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDI-KAKMDK 177 Query: 181 ELYNEFPEP 189 +L P+ Sbjct: 178 KLEGNSPQG 186 >5SZJ-A nrPDB Length = 202 Score = 222 bits (567), Expect = 6e-59, Method: Composition-based stats. Identities = 65/184 (35%), Positives = 112/184 (60%), Gaps = 4/184 (2%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDT 64 +L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K V + + + +QIWDT Sbjct: 8 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 67 Query: 65 AGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLG 124 AGQERF ++ ++YRGA +LV+D+T +F+ + W A+ E+ ++LG Sbjct: 68 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 123 Query: 125 NKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYN 184 NK D+++++V K ++ I +FETSAK IN+E+AF T+A + L++ E + Sbjct: 124 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNS 183 Query: 185 EFPE 188 E + Sbjct: 184 ENVD 187 >1YZN-A nrPDB Length = 185 Score = 220 bits (562), Expect = 3e-58, Method: Composition-based stats. Identities = 63/174 (36%), Positives = 103/174 (59%), Gaps = 4/174 (2%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 61 S L K++++G+SGVGK+ L+ ++ + ++N Y +TIG DF K V +D + V +QI Sbjct: 15 GSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 74 Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121 WDTAGQERF+++ ++YRG+ ++V+DVT +F + W E A + Sbjct: 75 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYA----TSTVLKL 130 Query: 122 VLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 ++GNK DL++++V N +P+ ETSA ++ NVE AF T+AR + Sbjct: 131 LVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKE 184 >5LPN-A nrPDB Length = 177 Score = 220 bits (560), Expect = 5e-58, Method: Composition-based stats. Identities = 63/172 (36%), Positives = 108/172 (62%), Gaps = 4/172 (2%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDT 64 +L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K V + + + +QIWDT Sbjct: 8 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 67 Query: 65 AGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLG 124 AGQERF ++ ++YRGA +LV+D+T +F+ + W A+ E+ ++LG Sbjct: 68 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLG 123 Query: 125 NKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 NK D+++++V K ++ I +FETSAK IN+E+AF T+A + L++ Sbjct: 124 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 175 >2A5J-A nrPDB Length = 191 Score = 219 bits (558), Expect = 7e-58, Method: Composition-based stats. Identities = 66/179 (36%), Positives = 105/179 (58%), Gaps = 4/179 (2%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 + R L K II+GD+GVGK+ L+ Q+ +K+F + TIG +F + V +D + + +Q Sbjct: 14 LVPRGSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQ 73 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 IWDTAGQE F+S+ ++YRGA +LV+D+T TF L SW ++ A N Sbjct: 74 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLED----ARQHSSSNMVI 129 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 +++GNK DLE+R+ + ++ + + ETSAK A NVE+AF A+ ++ + Sbjct: 130 MLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQ 188 >2IEZ-A nrPDB Length = 220 Score = 218 bits (556), Expect = 1e-57, Method: Composition-based stats. Identities = 73/221 (33%), Positives = 119/221 (53%), Gaps = 22/221 (9%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDR------- 55 L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V+ D + Sbjct: 6 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASG 65 Query: 56 ---LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASP 112 V +Q+WDTAG ERF+SL AF+R A +L+FD+T+ +F + +W + A Sbjct: 66 KAFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 125 Query: 113 RDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN 172 +P+ V++GNK DL +++ +R K IPYFETSA NVE++ +T+ Sbjct: 126 ENPD---IVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDL 182 Query: 173 ALKQETEVELYNEFPEPI------KLDKNERAKASAESCSC 207 +K+ + + P+ + KLD K + + C+C Sbjct: 183 IMKRMEKCVEKTQVPDTVNGGNSGKLDGE---KPAEKKCAC 220 >2F7S-A nrPDB Length = 217 Score = 218 bits (555), Expect = 2e-57, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 112/200 (56%), Gaps = 13/200 (6%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDR------ 55 + L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V+ + + Sbjct: 19 SGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSS 78 Query: 56 ----LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQAS 111 V +Q+WDTAGQERF+SL AF+R A +L+FD+T+ +F + +W + A Sbjct: 79 GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 138 Query: 112 PRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 +P+ V++GNK DL +++ +R K IPYFETSA NVE+A +T+ Sbjct: 139 CENPD---IVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLD 195 Query: 172 NALKQETEVELYNEFPEPIK 191 +K+ + + P+ + Sbjct: 196 LIMKRMEQCVEKTQIPDTVN 215 >1Z0A-A nrPDB Length = 174 Score = 217 bits (553), Expect = 3e-57, Method: Composition-based stats. Identities = 65/176 (36%), Positives = 105/176 (59%), Gaps = 4/176 (2%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 + S L K II+GD+GVGK+ L+ Q+ +K+F + TIG +F + + +D + + +Q Sbjct: 3 LGSAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQ 62 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 IWDTAGQE F+S+ ++YRGA +LV+D+T +TF L +W ++ A N Sbjct: 63 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLED----ARQHSNSNMVI 118 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 +++GNK DLE+R+ K ++ + + ETSAK A NVE+AF A+ ++ Sbjct: 119 MLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK 174 >1X3S-A nrPDB Length = 195 Score = 217 bits (552), Expect = 3e-57, Method: Composition-based stats. Identities = 70/189 (37%), Positives = 107/189 (56%), Gaps = 4/189 (2%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M LK++I+G+SGVGK+SL+ ++ + F + ATIG DF K + VD + Sbjct: 8 MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA 67 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 IWDTAGQERF++L ++YRGA +LV+DVT +TF LD+W +E + D N Sbjct: 68 IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVN--- 124 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180 +++GNKID ENR+V + K+++ + E SAK V+ AF+ + ++ Sbjct: 125 MLVGNKIDKENREVDRNEGLKFA-RKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLW 183 Query: 181 ELYNEFPEP 189 E N+ P Sbjct: 184 ESENQNSGP 192 >3CPH-A nrPDB Length = 213 Score = 214 bits (544), Expect = 3e-56, Method: Composition-based stats. Identities = 64/180 (35%), Positives = 105/180 (58%), Gaps = 5/180 (2%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDT 64 ++K++++GDSGVGK+ L+ ++V KF+ + TIG DF K V ++ + V +Q+WDT Sbjct: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDT 76 Query: 65 AGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLG 124 AGQERF+++ A+YRGA +LV+DVT TF + W A+ + +++G Sbjct: 77 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN----DEAQLLLVG 132 Query: 125 NKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYN 184 NK D+E R V + +A + IP+ E+SAK NV + F T+A+ ++ +L Sbjct: 133 NKSDMETRVVTADQGEALA-KELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVG 191 >4RKE-A nrPDB Length = 176 Score = 212 bits (539), Expect = 1e-55, Method: Composition-based stats. Identities = 62/178 (34%), Positives = 102/178 (57%), Gaps = 4/178 (2%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M L K II+GD+GVGK+ L+ Q+ +K+F + TIG +F + + +D + + +Q Sbjct: 3 MGMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQ 62 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 IWDTAG E F+S+ ++YRGA +LV+D+T TF L +W ++ A N Sbjct: 63 IWDTAGLEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED----ARQHSNSNMVI 118 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQET 178 +++GNK DL++R+ K ++ + + ETSA+ A NVE+AF A+ ++ Sbjct: 119 MLIGNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQ 176 >6IF2-B nrPDB Length = 186 Score = 211 bits (538), Expect = 1e-55, Method: Composition-based stats. Identities = 63/179 (35%), Positives = 97/179 (54%), Gaps = 5/179 (2%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M L K++I+GDSGVGK+SL+ ++ + FS Y TIG DF + V ++ V +Q Sbjct: 7 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 66 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 IWDTAG ERF+++ +YRG ++V+DVT+ +F + W E ++ Sbjct: 67 IWDTAGLERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-----DDVCR 121 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 +++GNK D R+V + I FETSAKE +NVE+ F I L+ + + Sbjct: 122 ILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKD 180 >3CPJ-B nrPDB Length = 223 Score = 211 bits (538), Expect = 1e-55, Method: Composition-based stats. Identities = 52/179 (29%), Positives = 107/179 (59%), Gaps = 4/179 (2%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDT 64 +L K++++GDSGVGK++L++++ +F+ K+TIG +F T+ + ++ + + QIWDT Sbjct: 10 YDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDT 69 Query: 65 AGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLG 124 AGQER++++ A+YRGA ++V+D++ ++++ + W E A +N ++G Sbjct: 70 AGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENAD----DNVAVGLIG 125 Query: 125 NKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELY 183 NK DL + + +N + + ETSA + NV++AF+ + ++ ++ ++ Sbjct: 126 NKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMD 184 >2F9L-A nrPDB Length = 199 Score = 211 bits (537), Expect = 2e-55, Method: Composition-based stats. Identities = 66/180 (36%), Positives = 112/180 (62%), Gaps = 6/180 (3%) Query: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63 L KV+++GDSGVGK++L++++ +F+ + K+TIG +F T+ + VD + + QIWD Sbjct: 1 MYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 60 Query: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123 TAGQER++ + A+YRGA +LV+D+ T++ ++ W E A N +++ Sbjct: 61 TAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLV 116 Query: 124 GNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVEL 182 GNK DL + R V T A+A+ KNN+ + ETSA ++ NVE+AF+ I + ++ ++ Sbjct: 117 GNKSDLRHLRAVPTDEARAFA-EKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 175 >2BMD-A nrPDB Length = 186 Score = 211 bits (537), Expect = 2e-55, Method: Composition-based stats. Identities = 66/188 (35%), Positives = 105/188 (55%), Gaps = 4/188 (2%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M+ L K +++G++G GK+ L++Q++ KKF + TIG +F +K + V + V +Q Sbjct: 3 MSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQ 62 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 IWDTAGQERF+S+ ++YRGA +LV+D+T+ T+ L +W + A +N Sbjct: 63 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTD----ARMLASQNIVI 118 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180 ++ GNK DL+ + T + +N + + ETSA NVE+AF AR L + Sbjct: 119 ILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESG 178 Query: 181 ELYNEFPE 188 EL E Sbjct: 179 ELDPERMG 186 >4UJ4-A nrPDB Length = 185 Score = 210 bits (536), Expect = 3e-55, Method: Composition-based stats. Identities = 66/182 (36%), Positives = 112/182 (61%), Gaps = 6/182 (3%) Query: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63 L KV+++GDSGVGK++L++++ +F+ + K+TIG +F T+ + VD + + QIWD Sbjct: 6 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 65 Query: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123 TAG ER++++ A+YRGA +LV+D+ T++ ++ W E A N +++ Sbjct: 66 TAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLV 121 Query: 124 GNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVEL 182 GNK DL + R V T A+A+ KN + + ETSA ++ NVE AFQTI + ++ ++ Sbjct: 122 GNKSDLRHLRAVPTDEARAFA-EKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 180 Query: 183 YN 184 + Sbjct: 181 SD 182 >1ZBD-A nrPDB Length = 203 Score = 210 bits (536), Expect = 3e-55, Method: Composition-based stats. Identities = 54/174 (31%), Positives = 99/174 (56%), Gaps = 4/174 (2%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65 + K++I+G+S VGKTS + +Y + F+ + +T+G DF K + +D+ + +QIWDTA Sbjct: 6 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTA 65 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125 G ER++++ A+YRGA +L++D+T +F + W + +N +++GN Sbjct: 66 GLERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTY----SWDNAQVLLVGN 121 Query: 126 KIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 K D+E+ +V + +FE SAK+ INV+Q F+ + ++ +E Sbjct: 122 KCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSE 175 >5UB8-A nrPDB Length = 222 Score = 210 bits (536), Expect = 3e-55, Method: Composition-based stats. Identities = 55/183 (30%), Positives = 107/183 (58%), Gaps = 4/183 (2%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDT 64 + L K++++GDSGVGK++L++++ +F+ + ++TIG +F T+ + +D + V QIWDT Sbjct: 12 YEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDT 71 Query: 65 AGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLG 124 AGQER++++ A+YRGA ++V+D+ +++++ W E A N ++G Sbjct: 72 AGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADA----NIIIELVG 127 Query: 125 NKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYN 184 NK DL++ + +NN+ + E SA + NV+ +F + +N + ++ +L N Sbjct: 128 NKSDLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLEN 187 Query: 185 EFP 187 Sbjct: 188 NDS 190 >2EW1-A nrPDB Length = 201 Score = 210 bits (535), Expect = 4e-55, Method: Composition-based stats. Identities = 65/186 (34%), Positives = 103/186 (55%), Gaps = 4/186 (2%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 61 L K++++G++GVGKT L+ ++ F ATIG DF+ K V ++ V +QI Sbjct: 20 MEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQI 79 Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121 WDTAGQERF+S+ ++YR A+ +L +D+T +F+ L W E AS + V Sbjct: 80 WDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNK----VITV 135 Query: 122 VLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVE 181 ++GNKIDL R+ +++ ++ Y ETSAKE+ NVE+ F +A + + + Sbjct: 136 LVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNT 195 Query: 182 LYNEFP 187 L N Sbjct: 196 LVNNVS 201 >2J0V-A nrPDB Length = 212 Score = 210 bits (534), Expect = 4e-55, Method: Composition-based stats. Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 22/210 (10%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 +K + +GD VGKT ++ Y + KF Y T+ +F + V VD ++V + +WDTAGQ Sbjct: 9 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAVDGQIVNLGLWDTAGQ 67 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNK 126 E + L YRGAD VL F + + +++ + W E R N P V++G K Sbjct: 68 EDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELR-----RFAPNVPIVLVGTK 122 Query: 127 IDLENRQ---------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177 +DL + + + + + + Y E S+K NV+ F T + L+ Sbjct: 123 LDLRDDKGYLADHTNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPP 182 Query: 178 TEVELYNEFPEPIKLDKNERAKASAESCSC 207 E+ P + + R+ S S C Sbjct: 183 RRKEV------PRRRKNHRRSGCSIASIVC 206 >2G6B-A nrPDB Length = 180 Score = 209 bits (533), Expect = 5e-55, Method: Composition-based stats. Identities = 62/176 (35%), Positives = 101/176 (57%), Gaps = 5/176 (2%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKF-SNQYKATIGADFLTKEVMVDDRLVTMQIWD 63 V KV+++GDSGVGKT L+ ++ + F + + +T+G DF K + VD V +Q+WD Sbjct: 7 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWD 66 Query: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123 TAGQERF+S+ A+YR A +L++DVT +F + +W E A + ++L Sbjct: 67 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYA----QHDVALMLL 122 Query: 124 GNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 GNK+D + +V + + +P+ ETSAK +NV+ AF IA+ ++ + Sbjct: 123 GNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKRRSMK 178 >2HEI-A nrPDB Length = 179 Score = 209 bits (532), Expect = 7e-55, Method: Composition-based stats. Identities = 68/171 (39%), Positives = 100/171 (58%), Gaps = 4/171 (2%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +DD V +IWDTAGQE Sbjct: 9 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 68 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 R+ SL +YRGA ++V+D+T TF +W E QASP + + GNK D Sbjct: 69 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASP----SIVIALAGNKAD 124 Query: 129 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 L N+++ N++ + ETSAK A+NV F IA+ K E + Sbjct: 125 LANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQ 175 >1Z0F-A nrPDB Length = 179 Score = 209 bits (532), Expect = 7e-55, Method: Composition-based stats. Identities = 62/173 (35%), Positives = 96/173 (55%), Gaps = 4/173 (2%) Query: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63 + K II+GD GVGK+ L++Q+ KKF TIG +F T+ + V + + +QIWD Sbjct: 11 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 70 Query: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123 TAGQERF+++ ++YRGA ++V+D+T +T+ L SW + A N +++ Sbjct: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD----ARNLTNPNTVIILI 126 Query: 124 GNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 GNK DLE ++ T +N + + E SAK NVE AF A+ + Sbjct: 127 GNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQN 179 >2OCY-C nrPDB Length = 170 Score = 209 bits (532), Expect = 8e-55, Method: Composition-based stats. Identities = 63/174 (36%), Positives = 103/174 (59%), Gaps = 5/174 (2%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65 ++K++++GDSGVGK+ L+ ++V KF+ + TIG DF K V ++ + V +Q+WDTA Sbjct: 1 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 60 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125 GQERF+++ A+YRGA +LV+DVT TF + W A+ + +++GN Sbjct: 61 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN----DEAQLLLVGN 116 Query: 126 KIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 K D+E R V + +A + IP+ E+SAK NV + F T+A+ ++ Sbjct: 117 KSDMETRVVTADQGEALA-KELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDS 169 >2O52-A nrPDB Length = 200 Score = 208 bits (531), Expect = 9e-55, Method: Composition-based stats. Identities = 66/182 (36%), Positives = 102/182 (56%), Gaps = 4/182 (2%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65 L K +++G +G GK+ L++Q++ KF TIG +F ++ V V + V +QIWDTA Sbjct: 23 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTA 82 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125 GQERF+S+ ++YRGA +LV+D+T+ T+ +L +W + ASP N ++ GN Sbjct: 83 GQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASP----NIVVILCGN 138 Query: 126 KIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNE 185 K DL+ + T + +N + + ETSA NVE+AF AR L + EL E Sbjct: 139 KKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPE 198 Query: 186 FP 187 Sbjct: 199 RM 200 >6O62-A nrPDB Length = 184 Score = 208 bits (530), Expect = 1e-54, Method: Composition-based stats. Identities = 63/176 (35%), Positives = 106/176 (60%), Gaps = 6/176 (3%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDT 64 +++K++++GDSGVGK+ L+ ++V KF+ + TIG DF + + + + +Q+WDT Sbjct: 11 YDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDT 70 Query: 65 AGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLG 124 AGQERF+++ A+YRGA VL++DVT +F+ +++W A+ E+ ++G Sbjct: 71 AGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHAN----EDAQIFLVG 126 Query: 125 NKIDLE-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 NK D E NRQV+ ++ Q K N+P+ E SAK NV+ F +A ++ E Sbjct: 127 NKCDDEVNRQVSKEQGQELAA-KLNVPFLEASAKSNENVDSIFYELASIIQEKHVE 181 >2GF9-A nrPDB Length = 189 Score = 208 bits (529), Expect = 2e-54, Method: Composition-based stats. Identities = 56/174 (32%), Positives = 96/174 (55%), Gaps = 4/174 (2%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65 + K++++G+S VGKTS + +Y + F+ + +T+G DF K V D+ + +QIWDTA Sbjct: 20 DYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTA 79 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125 GQER++++ A+YRGA +L++D+ +F + W + +N +++GN Sbjct: 80 GQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTY----SWDNAQVILVGN 135 Query: 126 KIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 K DLE+ +V +FE SAKE INV+Q F+ + ++ E Sbjct: 136 KCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNE 189 >3RAB-A nrPDB Length = 169 Score = 207 bits (527), Expect = 3e-54, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 98/171 (57%), Gaps = 4/171 (2%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65 + K++I+G+S VGKTS + +Y + F+ + +T+G DF K + +D+ + +QIWDTA Sbjct: 3 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTA 62 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125 GQER++++ A+YRGA +L++D+T +F + W + +N +++GN Sbjct: 63 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTY----SWDNAQVLLVGN 118 Query: 126 KIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 K D+E+ +V + +FE SAK+ INV+Q F+ + ++ Sbjct: 119 KCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEK 169 >1TU4-A nrPDB Length = 171 Score = 207 bits (527), Expect = 3e-54, Method: Composition-based stats. Identities = 67/175 (38%), Positives = 100/175 (57%), Gaps = 4/175 (2%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 61 K K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +DD V +I Sbjct: 1 MGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 60 Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121 WDTAGQER+ SL +YRGA ++V+D+T +F +W E QASP N Sbjct: 61 WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASP----NIVIA 116 Query: 122 VLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 + GNK DL N++ + N++ + ETSAK ++NV + F IA+ K Sbjct: 117 LSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKN 171 >3DZ8-A nrPDB Length = 191 Score = 205 bits (523), Expect = 9e-54, Method: Composition-based stats. Identities = 56/177 (31%), Positives = 97/177 (54%), Gaps = 4/177 (2%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 62 + K++I+G+S VGKTS + +Y + F+ + +T+G DF K V ++ V +QIW Sbjct: 18 GNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIW 77 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 DTAGQER++++ A+YRGA +L++D+T +F + W + +N ++ Sbjct: 78 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTY----SWDNAQVIL 133 Query: 123 LGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 +GNK D+E +V + +FE SAKE I+V QAF+ + + ++ Sbjct: 134 VGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSD 190 >4G01-B nrPDB Length = 181 Score = 205 bits (522), Expect = 1e-53, Method: Composition-based stats. Identities = 65/173 (37%), Positives = 97/173 (56%), Gaps = 4/173 (2%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 62 K + K+++LGD G GK+SL+ ++V +F ++TIGA F ++ + V+D V +IW Sbjct: 7 GNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIW 66 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 DTAGQER+ SL +YRGA ++VFDVT +F+ W E Q +P N + Sbjct: 67 DTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNP----NMVMAL 122 Query: 123 LGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 GNK DL + + T +N + + ETSAK A NV++ F IAR + Sbjct: 123 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPR 175 >4RKF-A nrPDB Length = 190 Score = 205 bits (521), Expect = 1e-53, Method: Composition-based stats. Identities = 57/174 (32%), Positives = 103/174 (59%), Gaps = 4/174 (2%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65 + K++I+G+S VGKTS + +Y + F++ + +T+G DF K V D+ V +QIWDTA Sbjct: 21 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTA 80 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125 G ER++++ A+YRGA +L++DVT ++F ++ W + +N +++GN Sbjct: 81 GLERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTY----SWDNAQVILVGN 136 Query: 126 KIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 K D+E+++V + + + +FETSAKE +NV+ F+ + + +E Sbjct: 137 KCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSE 190 >4CZ2-A nrPDB Length = 230 Score = 205 bits (521), Expect = 1e-53, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 113/206 (54%), Gaps = 3/206 (1%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRL-VTMQI 61 ++ L KV+++G+ GVGKTS++ +YV++ FS Y+ATIG DF K + D R V +Q+ Sbjct: 25 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 84 Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121 WD AG ERF ++ +Y+ A +VFD++ +TF+ + W+ + + + P V Sbjct: 85 WDIAGLERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 144 Query: 122 VLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180 +L NK D ++ ++ + +C +FETSAK+ IN+E+A + + L Sbjct: 145 LLANKCDQNKDSSMSPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKMLVNHQSF 204 Query: 181 ELYNEFPEPIKLDKNE-RAKASAESC 205 + IKLD+ RA+ ++ C Sbjct: 205 PNEENDVDKIKLDQETLRAENKSQCC 230 >2IEY-A nrPDB Length = 195 Score = 204 bits (520), Expect = 2e-53, Method: Composition-based stats. Identities = 66/193 (34%), Positives = 107/193 (55%), Gaps = 13/193 (6%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDR------- 55 L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V+ D + Sbjct: 6 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASG 65 Query: 56 ---LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASP 112 V +Q+WDTAG ERF+SL AF+R A +L+FD+T+ +F + +W + A Sbjct: 66 KAFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 125 Query: 113 RDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN 172 +P+ V++GNK DL +++ +R K IPYFETSA NVE++ +T+ Sbjct: 126 ENPD---IVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDL 182 Query: 173 ALKQETEVELYNE 185 +K+ + + Sbjct: 183 IMKRMEKCVEKTQ 195 >6HUF-A nrPDB Length = 182 Score = 203 bits (518), Expect = 3e-53, Method: Composition-based stats. Identities = 65/177 (36%), Positives = 100/177 (56%), Gaps = 3/177 (1%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 62 L+K + LGDSGVGKTS++ QY + KF++++ T+G DF K + +D+ + +Q+W Sbjct: 4 GDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKLQLW 63 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 DTAG ERF+SL AF+R A +L+FD+T +F + +W + A +P+ V+ Sbjct: 64 DTAGLERFRSLTTAFFRDAMGFLLLFDLTNEESFLNVRNWISQLKTHAYSENPD---IVL 120 Query: 123 LGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 GNK DLE+ +V IPYFETSA N+ QA + + +K+ Sbjct: 121 CGNKSDLEDERVVAAAEARQLAEHYGIPYFETSAANGTNISQAIEMLLDLIMKRMER 177 >2HUP-A nrPDB Length = 201 Score = 203 bits (517), Expect = 4e-53, Method: Composition-based stats. Identities = 58/176 (32%), Positives = 103/176 (58%), Gaps = 5/176 (2%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 62 + L K++++GD+ VGKT ++ ++ FS + +TIG DF K + + + V +QIW Sbjct: 24 EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 83 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 DTAGQERF+++ ++YR A+ +L +D+T ++F ++ W ++ A N ++ Sbjct: 84 DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYA----GSNIVQLL 139 Query: 123 LGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177 +GNK DL R+V+ AQ+ + + ETSAK++ NVE+AF +A + + Sbjct: 140 IGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRH 195 >5XR6-A nrPDB Length = 194 Score = 203 bits (516), Expect = 5e-53, Method: Composition-based stats. Identities = 61/172 (35%), Positives = 98/172 (56%), Gaps = 4/172 (2%) Query: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63 L K++++GDSGVGK++L++++ +F+ + K+TIG +F TK V+ ++V QIWD Sbjct: 21 MYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWD 80 Query: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123 TAGQER++++ A+YRGA +L++DVT TF+ W E P N +++ Sbjct: 81 TAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDP----NIVVMLI 136 Query: 124 GNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 GNK DL + + ++ + ETSA +A NVE AF + K Sbjct: 137 GNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHK 188 >5LEF-A nrPDB Length = 191 Score = 203 bits (516), Expect = 5e-53, Method: Composition-based stats. Identities = 65/186 (34%), Positives = 106/186 (56%), Gaps = 4/186 (2%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 K++ LG+ VGKTSL+ +++ F N Y+ATIG DFL+K + ++DR V +Q+WDTAG E Sbjct: 10 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGLE 69 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF+SL ++ R + V+V+D+T N+F+ W D+ + +++GNK D Sbjct: 70 RFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDV----RTERGSDVIIMLVGNKTD 125 Query: 129 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPE 188 L +++ + + N+ + ETSAK NV+Q F+ +A E+ + E Sbjct: 126 LADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMI 185 Query: 189 PIKLDK 194 IKL+K Sbjct: 186 DIKLEK 191 >4KYI-B nrPDB Length = 170 Score = 203 bits (516), Expect = 6e-53, Method: Composition-based stats. Identities = 65/165 (39%), Positives = 98/165 (59%), Gaps = 4/165 (2%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +DD V +IWDTAG E Sbjct: 10 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGLE 69 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 R+ SL +YRGA ++V+D+T +TF +W E QASP N + GNK D Sbjct: 70 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASP----NIVIALAGNKAD 125 Query: 129 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 173 L +++ + N++ + ETSAK A+NV + F IA+ Sbjct: 126 LASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 170 >3BFK-A nrPDB Length = 181 Score = 202 bits (514), Expect = 1e-52, Method: Composition-based stats. Identities = 61/182 (33%), Positives = 106/182 (58%), Gaps = 5/182 (2%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV-DDRLVTMQIWD 63 L K++++GDSGVGK++L++++ +F+ + K+TIG +F TK + + +++++ QIWD Sbjct: 4 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWD 63 Query: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123 TAGQER++++ A+YRGA +LV+D+T N+F+ ++ W E A N +++ Sbjct: 64 TAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNAD----SNIVILLV 119 Query: 124 GNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELY 183 GNK DL++ +V K + + ETSA EA NVE AF + + + Sbjct: 120 GNKSDLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQAT 179 Query: 184 NE 185 Sbjct: 180 KN 181 >3RWM-B nrPDB Length = 185 Score = 200 bits (508), Expect = 5e-52, Method: Composition-based stats. Identities = 57/184 (30%), Positives = 112/184 (60%), Gaps = 6/184 (3%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M L K++++GDSGVGK++L++++ +F+ + K+TIG +F T+ + V+++ + Q Sbjct: 3 MGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQ 62 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 IWDTAG ER++++ A+YRGA ++V+D++ ++++ + W E A +N Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENAD----DNVAV 118 Query: 121 VVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 ++GNK DL + R V T A+ + +N + + ETSA + NV++AF+ + + ++ Sbjct: 119 GLIGNKSDLAHLRAVPTDEAKNFAM-ENQMLFTETSALNSDNVDKAFRELIVAIFQMVSK 177 Query: 180 VELY 183 ++ Sbjct: 178 HQVD 181 >3BC1-A nrPDB Length = 195 Score = 199 bits (506), Expect = 7e-52, Method: Composition-based stats. Identities = 64/187 (34%), Positives = 101/187 (54%), Gaps = 13/187 (6%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD--------- 53 L+K + LGDSGVGKTS++ QY + KF++++ T+G DF K V+ Sbjct: 6 GDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVG 65 Query: 54 -DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASP 112 + + +Q+WDTAG ERF+SL AF+R A +L+FD+T +F + +W + + A Sbjct: 66 RGQRIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYS 125 Query: 113 RDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN 172 +P+ V+ GNK DLE+++ + K IPYFETSA N+ A + + Sbjct: 126 ENPD---IVLCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGTNISHAIEMLLDL 182 Query: 173 ALKQETE 179 +K+ Sbjct: 183 IMKRMER 189 >5YOZ-A nrPDB Length = 177 Score = 198 bits (505), Expect = 1e-51, Method: Composition-based stats. Identities = 65/179 (36%), Positives = 100/179 (55%), Gaps = 10/179 (5%) Query: 1 MTSRKKVLL-----KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDR 55 M + L+ K+++LG+SG GK+S+ ++ +F + TIGA FL+K VM+D R Sbjct: 3 MNTHPPQLMEATSAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGR 62 Query: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDP 115 + +IWDTAG ERF+SL +YRGA ++V+D+T + K +W E A P Sbjct: 63 ALKYEIWDTAGLERFRSLAPIYYRGASGALVVYDITNSESLKKAQTWIKELRANADP--- 119 Query: 116 ENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 173 + V++GNK DL + RQV+ + Q + ++E SAK+ NVEQ F +A Sbjct: 120 -SLIIVLVGNKKDLGSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLAAKL 177 >3TSO-A nrPDB Length = 178 Score = 198 bits (504), Expect = 1e-51, Method: Composition-based stats. Identities = 63/180 (35%), Positives = 106/180 (58%), Gaps = 6/180 (3%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 61 + KV+++G+SGVGKT+L++++ +FS+ + TIG +F T+ VM+ V QI Sbjct: 4 MEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 63 Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121 WDTAG ER++++ A+YRGA +LVFD+T T+ ++ W E A + Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEA----TIVVM 119 Query: 122 VLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180 ++GNK DL R+V T+ A+ + N + + ETSA ++ NVE AF+T+ + + ++ Sbjct: 120 LVGNKSDLSQAREVPTEEARMFA-ENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 178 >4M8N-E nrPDB Length = 199 Score = 198 bits (503), Expect = 2e-51, Method: Composition-based stats. Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 5/166 (3%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 K+++LG GVGK++L Q+V F +Y TI D K+V VD + ++I DTAG E Sbjct: 7 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDAQQCMLEILDTAGTE 65 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 +F ++ + + LV+ +TA +TF L R++ L +D ++ P +++GNK D Sbjct: 66 QFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQIL---RVKDTDDVPMILVGNKCD 122 Query: 129 LENRQVA-TKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 173 LE+ +V ++ Q NN + E+SAK INV + F + R Sbjct: 123 LEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 168 >2G77-B nrPDB Length = 198 Score = 198 bits (503), Expect = 2e-51, Method: Composition-based stats. Identities = 63/178 (35%), Positives = 101/178 (56%), Gaps = 9/178 (5%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 + + + K+I++GDS VGKT L ++ +F ++ +ATIG DF + V +D + +Q Sbjct: 22 LPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQ 81 Query: 61 IWDTAGQERFQ-SLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119 +WDTAGQERF+ S+ +YR V V+D+T +F +L +W +E + P Sbjct: 82 LWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLAN---DIP 138 Query: 120 FVVLGNKIDLENR-QVATKRAQAWCYSKNNIPYFETSAK---EAINVEQAFQTIARNA 173 +++GNK DL + QV T AQ + +++P FETSAK + +VE F T+A Sbjct: 139 RILVGNKCDLRSAIQVPTDLAQKFA-DTHSMPLFETSAKNPNDNDHVEAIFMTLAHKL 195 >2FG5-A nrPDB Length = 192 Score = 197 bits (502), Expect = 2e-51, Method: Composition-based stats. Identities = 73/166 (43%), Positives = 98/166 (59%), Gaps = 6/166 (3%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 LKV +LGD+GVGK+S++ ++V F + TIGA F+TK V + L IWDTAGQE Sbjct: 24 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 83 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF SL +YRG+ V+V+D+T ++F TL W E PEN + GNK D Sbjct: 84 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEH----GPENIVMAIAGNKCD 139 Query: 129 LEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 173 L + R+V K A+ + S I ETSAK AIN+E+ FQ I+R Sbjct: 140 LSDIREVPLKDAKEYAESIGAIV-VETSAKNAINIEELFQGISRQI 184 >1Z06-A nrPDB Length = 189 Score = 197 bits (501), Expect = 3e-51, Method: Composition-based stats. Identities = 63/176 (35%), Positives = 100/176 (56%), Gaps = 9/176 (5%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 62 + + K+I++GDS VGKT L ++ +F ++ +ATIG DF + V +D + +Q+W Sbjct: 15 GSRSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLW 74 Query: 63 DTAGQERFQ-SLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121 DTAGQERF+ S+ +YR V V+D+T +F +L +W +E + P + Sbjct: 75 DTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLAN---DIPRI 131 Query: 122 VLGNKIDLENR-QVATKRAQAWCYSKNNIPYFETSAK---EAINVEQAFQTIARNA 173 ++GNK DL + QV T AQ + +++P FETSAK + +VE F T+A Sbjct: 132 LVGNKCDLRSAIQVPTDLAQKFA-DTHSMPLFETSAKNPNDNDHVEAIFMTLAHKL 186 >2FFQ-A nrPDB Length = 171 Score = 196 bits (499), Expect = 5e-51, Method: Composition-based stats. Identities = 61/167 (36%), Positives = 100/167 (59%), Gaps = 4/167 (2%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 K++ LG+ VGKTSL+ +++ F N Y+ATIG DFL+K + ++DR V +Q+WDTAGQE Sbjct: 3 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 62 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF+SL ++ R + V+V+D+T N+F+ W D+ + +++GNK D Sbjct: 63 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDV----RTERGSDVIIMLVGNKTD 118 Query: 129 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 L +++ T + ++ + ETSAK NV+Q F+ +A L+ Sbjct: 119 LADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALLE 165 >2IL1-A nrPDB Length = 192 Score = 194 bits (493), Expect = 2e-50, Method: Composition-based stats. Identities = 64/179 (35%), Positives = 100/179 (55%), Gaps = 7/179 (3%) Query: 2 TSRKKVLLK--VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTM 59 S + K VII+G GVGKTSLM ++ + F K+T+G DF K V + + + + Sbjct: 18 GSPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRL 77 Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119 QIWDTAGQERF S+ A+YR A +LV+D+T TF L W AS E+ Sbjct: 78 QIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYAS----EDAE 133 Query: 120 FVVLGNKIDLE-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177 +++GNK+D E +R++ ++ + + + + E SAK+ NV++ F + + LK+ Sbjct: 134 LLLVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKM 192 >5CM8-B nrPDB Length = 203 Score = 193 bits (491), Expect = 4e-50, Method: Composition-based stats. Identities = 55/174 (31%), Positives = 96/174 (55%), Gaps = 4/174 (2%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65 L KVI++G GVGK++L Q++ +F Y+ T AD K+V++D V + I DTA Sbjct: 11 PALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTA 69 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125 GQE + ++ ++R + + VF +T +F+ +R++ L ++ E+ PF+++GN Sbjct: 70 GQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQIL---RVKNDESIPFLLVGN 126 Query: 126 KIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 K DL +++ + +PY ETSAK NV++ F + R ++TE Sbjct: 127 KCDLNDKRKVPLSECQLRAQQWAVPYVETSAKTRENVDKVFFDLMREIRSRKTE 180 >1EK0-A nrPDB Length = 170 Score = 193 bits (491), Expect = 5e-50, Method: Composition-based stats. Identities = 62/169 (36%), Positives = 96/169 (56%), Gaps = 9/169 (5%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +K+++LG++ VGK+S++ ++V+ F+ + TIGA FLT+ V +++ V +IWDTAGQE Sbjct: 4 IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQE 63 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF SL +YR A ++V+DVT P +F W E QAS + ++GNKID Sbjct: 64 RFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASK----DIIIALVGNKID 119 Query: 129 L----ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 173 + R+VA + + + + +FETSAK NV F I Sbjct: 120 MLQEGGERKVAREEGEKLA-EEKGLLFFETSAKTGENVNDVFLGIGEKI 167 >4DXA-A nrPDB Length = 169 Score = 193 bits (491), Expect = 5e-50, Method: Composition-based stats. Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 5/166 (3%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 K+++LG GVGK++L Q+V F +Y TI D K+V VD + ++I DTAG E Sbjct: 6 YKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVDAQQCMLEILDTAGTE 64 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 +F ++ + + LV+ +TA +TF L R++ L +D ++ P +++GNK D Sbjct: 65 QFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQIL---RVKDTDDVPMILVGNKCD 121 Query: 129 LENRQVA-TKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 173 LE+ +V ++ Q NN + E+SAK INV + F + R Sbjct: 122 LEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 167 >1D5C-A nrPDB Length = 162 Score = 192 bits (489), Expect = 7e-50, Method: Composition-based stats. Identities = 54/165 (32%), Positives = 92/165 (55%), Gaps = 4/165 (2%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 K++ LG+ VGKTS++ +++ F N Y++TIG DFL+K + +D+ V +Q+WDTAGQE Sbjct: 2 YKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQE 61 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF+SL ++ R + ++V+D+T +F+ W + L ++ ++GNK D Sbjct: 62 RFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILN----ERGKDVIIALVGNKTD 117 Query: 129 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 173 L + + T + N + ETSAK N++ F+ A Sbjct: 118 LGDLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKTASKL 162 >4KLZ-A nrPDB Length = 173 Score = 192 bits (488), Expect = 9e-50, Method: Composition-based stats. Identities = 44/171 (25%), Positives = 84/171 (49%), Gaps = 4/171 (2%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 K+++LG GVGK+++ Q+++ +F + TI D + +DD + I DTAGQ Sbjct: 6 YKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTI-EDAYKIRIRIDDEPANLDILDTAGQA 64 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 F ++ + R + ++ + +T +F + ++ R ++ P V++GNK D Sbjct: 65 EFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIY---RVRRTDDTPVVLVGNKSD 121 Query: 129 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 L+ + TK + + P+FETSA ++ F + R ++E E Sbjct: 122 LKQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRRKEKE 172 >5ZHX-e nrPDB Length = 198 Score = 192 bits (488), Expect = 9e-50, Method: Composition-based stats. Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 20/198 (10%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 + S + K++I+GD GKT L+ + +F Y T+ + ++ VD + V + Sbjct: 3 LGSMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN-YVADIEVDGKQVELA 61 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFP 119 +WDTAGQE + L Y D ++ F + +P++ + + + W E N P Sbjct: 62 LWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-----KHFCPNVP 116 Query: 120 FVVLGNKIDLENRQ-------------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAF 166 +++GNK DL N + V + + Y E SAK V + F Sbjct: 117 IILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 176 Query: 167 QTIARNALKQETEVELYN 184 + R AL+ + Sbjct: 177 EMATRAALQARRGKKKSG 194 >1YVD-A nrPDB Length = 169 Score = 192 bits (488), Expect = 9e-50, Method: Composition-based stats. Identities = 67/166 (40%), Positives = 97/166 (58%), Gaps = 6/166 (3%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 LKV +LGD+GVGK+S++ ++V F TIGA F+TK V + L IWDTAGQE Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF++L +YRG+ ++V+D+T TF TL +W E P + + GNK D Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVREL----RQHGPPSIVVAIAGNKCD 121 Query: 129 LEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 173 L + R+V + A+ + S + I + ETSAK AIN+ + F I+R Sbjct: 122 LTDVREVMERDAKDYADSIHAI-FVETSAKNAININELFIEISRRI 166 >5C2K-A nrPDB Length = 415 Score = 192 bits (487), Expect = 1e-49, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 20/189 (10%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K++I+GD GKT L+ + +F Y T+ + ++ VD + V + +WDTAGQE Sbjct: 14 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN-YVADIEVDGKQVELALWDTAGQED 72 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKID 128 + L Y D ++ F + +P++ + + + W E N P +++GNK D Sbjct: 73 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-----KHFCPNVPIILVGNKKD 127 Query: 129 LENRQ-------------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 L N + V + + Y E SAK V + F+ R AL+ Sbjct: 128 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 187 Query: 176 QETEVELYN 184 + Sbjct: 188 ARRGKKKSG 196 >2GIL-A nrPDB Length = 162 Score = 191 bits (485), Expect = 2e-49, Method: Composition-based stats. Identities = 60/162 (37%), Positives = 98/162 (60%), Gaps = 4/162 (2%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 K++ LG+ VGKTSL+ +++ F N Y+ATIG DFL+K + ++DR V +Q+WDTAGQE Sbjct: 2 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 61 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF+SL ++ R + V+V+D+T N+F+ W D+ + +++GNK D Sbjct: 62 RFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDV----RTERGSDVIIMLVGNKTD 117 Query: 129 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA 170 L +++ + + N+ + ETSAK NV+Q F+ +A Sbjct: 118 LADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 159 >1YZU-A nrPDB Length = 170 Score = 190 bits (482), Expect = 4e-49, Method: Composition-based stats. Identities = 58/174 (33%), Positives = 102/174 (58%), Gaps = 6/174 (3%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 62 + KV++LG+ VGKTSL+ +Y KF++++ T+ A FLTK++ + + V + IW Sbjct: 1 GSRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 60 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 DTAGQERF +LG +YR ++ +LV+D+T ++F+ + +W E + Sbjct: 61 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNE----ICLCI 116 Query: 123 LGNKIDLE-NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 +GNKIDLE R V+ + A+++ S ++ TSAK+ +E+ F + + ++ Sbjct: 117 VGNKIDLEKERHVSIQEAESYAESV-GAKHYHTSAKQNKGIEELFLDLCKRMIE 169 >5UWI-A nrPDB Length = 237 Score = 188 bits (478), Expect = 1e-48, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 95/172 (55%), Gaps = 7/172 (4%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 62 +V K++++GD G GKT+ + +++ +F +Y AT+G + + + +W Sbjct: 26 GEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVW 85 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 DTAGQE+F L +Y A C +++FDVT+ T+K + +W + + EN P V+ Sbjct: 86 DTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVC-----ENIPIVL 140 Query: 123 LGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 GNK+D+++R+V K + K N+ Y++ SAK N E+ F +AR + Sbjct: 141 CGNKVDIKDRKVKAKSI--VFHRKKNLQYYDISAKSNYNFEKPFLWLARKLI 190 >2N1B-A nrPDB Length = 261 Score = 188 bits (478), Expect = 1e-48, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 95/172 (55%), Gaps = 7/172 (4%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 62 +V K++++GD G GKT+ + +++ +F +Y AT+G + + + +W Sbjct: 46 GEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVW 105 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 DTAGQE+F L +Y A C +++FDVT+ T+K + +W + + EN P V+ Sbjct: 106 DTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVC-----ENIPIVL 160 Query: 123 LGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 GNK+D+++R+V K + K N+ Y++ SAK N E+ F +AR + Sbjct: 161 CGNKVDIKDRKVKAKSI--VFHRKKNLQYYDISAKSNYNFEKPFLWLARKLI 210 >5CLL-A nrPDB Length = 191 Score = 188 bits (478), Expect = 1e-48, Method: Composition-based stats. Identities = 54/172 (31%), Positives = 95/172 (55%), Gaps = 7/172 (4%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 62 +V K++++GD G GKT+ + +++ +F +Y AT+G + + + +W Sbjct: 5 GEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVW 64 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 DTAGQE+F L +Y A C +++FDVT+ T+K + +W + + EN P V+ Sbjct: 65 DTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVC-----ENIPIVL 119 Query: 123 LGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 GNK+D+++R+V K + K N+ Y++ SAK N E+ F +AR + Sbjct: 120 CGNKVDIKDRKVKAKSI--VFHRKKNLQYYDISAKSNYNFEKPFLWLARKLI 169 >2WBL-C nrPDB Length = 180 Score = 188 bits (477), Expect = 2e-48, Method: Composition-based stats. Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 18/180 (10%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 +K + +GD VGKT ++ Y F Y T+ +F + V+VD V + +WDTAGQ Sbjct: 6 FIKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNK 126 E + L YRGAD +L F + + +++ + W E A P V++G K Sbjct: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYA-----PGIPIVLVGTK 119 Query: 127 IDLENRQ-----------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 +DL + + + T + + + Y E S+K NV+ F T R AL+ Sbjct: 120 LDLRDDKQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVALR 179 >3TH5-A nrPDB Length = 204 Score = 187 bits (476), Expect = 2e-48, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 20/180 (11%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +K +++GD VGKT L+ Y F +Y T+ D + VMVD + V + +WDTAGQE Sbjct: 31 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVF-DNYSANVMVDGKPVNLGLWDTAGQE 89 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLD-SWRDEFLIQASPRDPENFPFVVLGNKI 127 + L Y D ++ F + +P +F+ + W E N P +++G K+ Sbjct: 90 DYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHC-----PNTPIILVGTKL 144 Query: 128 DLENRQVATK-------------RAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 DL + + + + A + Y E SA ++ F R L Sbjct: 145 DLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 204 >5JCP-B nrPDB Length = 419 Score = 187 bits (474), Expect = 4e-48, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 20/180 (11%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K++I+GD GKT L+ +F Y T+ + ++ VD + V + +WDTAGQE Sbjct: 245 KLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFEN-YVADIEVDGKQVELALWDTAGQED 303 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKID 128 + L Y D ++ F + +P++ + + + W E N P +++GNK D Sbjct: 304 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-----KHFCPNVPIILVGNKKD 358 Query: 129 LENRQ-------------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 L N + V + + Y E SAK V + F+ R AL+ Sbjct: 359 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 418 >1Z22-A nrPDB Length = 168 Score = 187 bits (474), Expect = 4e-48, Method: Composition-based stats. Identities = 58/171 (33%), Positives = 100/171 (58%), Gaps = 5/171 (2%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65 +V +K++++G+ VGK+S++ +Y F+ YK TIG DFL +++ V+D V + +WDTA Sbjct: 3 EVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTA 62 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125 GQE F ++ A+YRGA CVLVF T +F+ + SWR++ + + + P ++ N Sbjct: 63 GQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVG-----DIPTALVQN 117 Query: 126 KIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 KIDL + + + ++ TS KE +NV + F+ +A L++ Sbjct: 118 KIDLLDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEKHLQK 168 >2J1L-A nrPDB Length = 214 Score = 186 bits (473), Expect = 5e-48, Method: Composition-based stats. Identities = 57/180 (31%), Positives = 83/180 (46%), Gaps = 20/180 (11%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +KV+++GD G GKTSL+ + + F Y T+ ++ + V + V + IWDTAGQ+ Sbjct: 35 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQD 93 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKI 127 + L FY A +L FDVT+PN+F + + W E + P +V+G K Sbjct: 94 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-----NHFCKKVPIIVVGCKT 148 Query: 128 DLENRQ-------------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 DL + V R Q S + Y E SA+ NV FQ A AL Sbjct: 149 DLRKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 208 >2FV8-A nrPDB Length = 207 Score = 185 bits (471), Expect = 9e-48, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 20/181 (11%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K++++GD GKT L+ + +F Y T+ + ++ VD + V + +WDTAGQE Sbjct: 27 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFEN-YVADIEVDGKQVELALWDTAGQED 85 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKID 128 + L Y D ++ F V +P++ + + + W E N P +++ NK D Sbjct: 86 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-----KHFCPNVPIILVANKKD 140 Query: 129 LENRQ-------------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 L + + V T +A Y E SAK V + F+T R AL+ Sbjct: 141 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 200 Query: 176 Q 176 + Sbjct: 201 K 201 >2NTY-C nrPDB Length = 180 Score = 185 bits (470), Expect = 1e-47, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 18/180 (10%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 +K + +GD VGKT ++ Y + F Y T+ +F + V+VD V + +WDTAGQ Sbjct: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGNTVNLGLWDTAGQ 64 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNK 126 E + L YRGAD +L F + + +++ + W E A P +++G K Sbjct: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYA-----PGVPIILVGTK 119 Query: 127 IDLENRQ-----------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 +DL + + + T + + + Y E S+K NV+ F + L+ Sbjct: 120 LDLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVLQ 179 >3RYT-C nrPDB Length = 180 Score = 185 bits (470), Expect = 1e-47, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 20/180 (11%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +K +++GD VGKT L+ Y F +Y T+ D + VMVD + V + +WDTAG E Sbjct: 7 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVF-DNYSANVMVDGKPVNLGLWDTAGLE 65 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLD-SWRDEFLIQASPRDPENFPFVVLGNKI 127 + L Y D ++ F + +P +F+ + W E N P +++G K+ Sbjct: 66 DYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHC-----PNTPIILVGTKL 120 Query: 128 DLENRQVATK-------------RAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 DL + + + + A + Y E SA ++ F R L Sbjct: 121 DLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 180 >1ZC4-A nrPDB Length = 175 Score = 185 bits (470), Expect = 1e-47, Method: Composition-based stats. Identities = 55/172 (31%), Positives = 95/172 (55%), Gaps = 4/172 (2%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L KVI++G GVGK++L Q++ +F Y+ T AD K+V++D V + I DTAG Sbjct: 6 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGL 64 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 E + ++ ++R + + VF +T +F +R++ L ++ EN PF+++GNK Sbjct: 65 EDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQIL---RVKEDENVPFLLVGNKS 121 Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 DLE+++ + + N+ Y ETSAK NV++ F + R ++ E Sbjct: 122 DLEDKRQVSVEEAKNRAEQWNVNYVETSAKTRANVDKVFFDLMREIRARKME 173 >2KE5-A nrPDB Length = 174 Score = 184 bits (468), Expect = 2e-47, Method: Composition-based stats. Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 3/172 (1%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L KVI++G GVGK++L Q++ +F Y+ T AD K+V++D V + I DTAG Sbjct: 3 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPT-KADSYRKKVVLDGEEVQIDILDTAGL 61 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 E + ++ ++R + +LVF +T +F +R++ L + + P +V+GNK Sbjct: 62 EDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEE--DKIPLLVVGNKS 119 Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 DLE R+ + + Y ETSAK NV++ F + R ++ Sbjct: 120 DLEERRQVPVEEARSKAEEWGVQYVETSAKTRANVDKVFFDLMREIRTKKMS 171 >3WYF-A nrPDB Length = 219 Score = 184 bits (468), Expect = 2e-47, Method: Composition-based stats. Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 7/170 (4%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 K++++GD G GKT+ + +++ +F +Y ATIG + + + +WDTAG E Sbjct: 13 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGLE 72 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 +F L +Y A C +++FDVT+ T+K + +W + + EN P V+ GNK+D Sbjct: 73 KFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVC-----ENIPIVLCGNKVD 127 Query: 129 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQET 178 ++ R+V K + K N+ Y++ SAK N E+ F +AR Sbjct: 128 VKERKVKAKTIT--FHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQ 175 >4WA7-A nrPDB Length = 170 Score = 184 bits (468), Expect = 2e-47, Method: Composition-based stats. Identities = 51/159 (32%), Positives = 84/159 (52%), Gaps = 5/159 (3%) Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG 80 K++L Q + F ++Y TI D K+V++D + I DTAG E + ++ + R Sbjct: 17 KSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGLEEYSAMRDQYMRT 75 Query: 81 ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQ 140 + + VF + +F+ + +R++ +D E+ P V++GNK DL +R V TK+AQ Sbjct: 76 GEGFLCVFAINNTKSFEDIHHYREQIK---RVKDSEDVPMVLVGNKCDLPSRTVDTKQAQ 132 Query: 141 AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 S IP+ ETSAK V+ AF T+ R K + + Sbjct: 133 DLARS-YGIPFIETSAKTRQGVDDAFYTLVREIRKHKEK 170 >4U5X-A nrPDB Length = 178 Score = 184 bits (468), Expect = 2e-47, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 18/180 (10%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 +K + +GD VGKT ++ Y + KF Y T+ +F + V VD +V + +WDTAG Sbjct: 5 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVSVDGSVVNLGLWDTAGL 63 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNK 126 E + L YRGAD +L F + + +++ + W E R P V++G K Sbjct: 64 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELR-----RFAPGVPVVLVGTK 118 Query: 127 IDLENRQ-----------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 +DL + + T++ + + Y E S+K N++ F T + L+ Sbjct: 119 LDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 178 >5XOJ-A nrPDB Length = 182 Score = 183 bits (466), Expect = 3e-47, Method: Composition-based stats. Identities = 53/170 (31%), Positives = 90/170 (52%), Gaps = 7/170 (4%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 K++++GD G GKT+ + +++ +F +Y ATIG + + + +WDTAG E Sbjct: 13 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGLE 72 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 +F L +Y A C +++FDVT+ T+K + +W + + EN P V+ GNK+D Sbjct: 73 KFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVC-----ENIPIVLCGNKVD 127 Query: 129 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQET 178 ++ R+V K + K N+ Y++ SAK N E+ F +AR Sbjct: 128 VKERKVKAKTIT--FHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQ 175 >4KU4-A nrPDB Length = 206 Score = 183 bits (466), Expect = 4e-47, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 16/195 (8%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65 K+ K+ +LG+ GVGKTSL FS Y T+ D ++ ++D ++I DTA Sbjct: 12 KITDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTL-EDSYRRQCVIDGIPSHLEILDTA 70 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEF----------LIQASPRDP 115 GQE + +L + R + V+VFDVT ++F+ + +E R P Sbjct: 71 GQEEYGALREQWIRQNELFVIVFDVTRRSSFEAAERLFEEVIQTKRKLDETRRHPGDRHP 130 Query: 116 ENFP-----FVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA 170 ++ P V++GNK DL+ R+ + K + ETSAK NVE+AF ++ Sbjct: 131 DDLPFAPSLVVLVGNKCDLDTRREVGTLEGSSLAKKLGCGFVETSAKLGTNVEEAFFSVV 190 Query: 171 RNALKQETEVELYNE 185 R +++ EV + Sbjct: 191 RADRRRKREVTDEEQ 205 >3BWD-D nrPDB Length = 182 Score = 183 bits (465), Expect = 4e-47, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 18/180 (10%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 +K + +GD VGKT L+ Y + F Y T+ +F + V+V+ V + +WDTAGQ Sbjct: 8 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVNGATVNLGLWDTAGQ 66 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNK 126 E + L YRGAD +L F + + +++ + W E A P V++G K Sbjct: 67 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-----PGVPIVLVGTK 121 Query: 127 IDLENRQ-----------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 +DL + + + T + + Y E S+K NV+ F R L+ Sbjct: 122 LDLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVLQ 181 >3CON-A nrPDB Length = 190 Score = 183 bits (465), Expect = 4e-47, Method: Composition-based stats. Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 5/155 (3%) Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG 80 K++L Q + F ++Y TI D K+V++D + I DTAGQE + ++ + R Sbjct: 34 KSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 92 Query: 81 ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQ 140 + + VF + +F ++ +R++ +D ++ P V++GNK DL R V TK+A Sbjct: 93 GEGFLCVFAINNSKSFADINLYREQIK---RVKDSDDVPMVLVGNKCDLPTRTVDTKQAH 149 Query: 141 AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 S IP+ ETSAK VE AF T+ R + Sbjct: 150 ELAKS-YGIPFIETSAKTRQGVEDAFYTLVREIRQ 183 >5WDR-A nrPDB Length = 171 Score = 182 bits (463), Expect = 7e-47, Method: Composition-based stats. Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 4/155 (2%) Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG 80 K++L Q + + F +Y TI D K V +DD + I DTAGQE + ++ + R Sbjct: 20 KSALTIQLIQQHFVTEYDPTI-EDSYRKHVSIDDEACLLDILDTAGQEDYSAMRDQYMRT 78 Query: 81 ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQ 140 + + V+ + + + + S+R++ L +D + P +++GNK DLE + + A Sbjct: 79 GEGFLCVYSIDSQQSLDEIHSFREQIL---RVKDQDEVPMILVGNKCDLEEHREVSTEAG 135 Query: 141 AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 +IP+ ETSAK+ INVE+AF + R K Sbjct: 136 QAVAKSYSIPFMETSAKKRINVEEAFYQLVREIRK 170 >5UHV-A nrPDB Length = 166 Score = 182 bits (462), Expect = 9e-47, Method: Composition-based stats. Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 5/155 (3%) Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG 80 K++L Q + F ++Y TI D K+V++D + I DTAGQE + ++ + R Sbjct: 16 KSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 74 Query: 81 ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQ 140 + + VF + +F ++ +R++ +D ++ P V++GNK DL R V TK+A Sbjct: 75 GEGFLCVFAINNSKSFADINLYREQIK---RVKDSDDVPMVLVGNKCDLPTRTVDTKQAH 131 Query: 141 AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 S IP+ ETSAK VE AF T+ R + Sbjct: 132 ELAKS-YGIPFIETSAKTRQGVEDAFYTLVREIRQ 165 >2WKQ-A nrPDB Length = 332 Score = 182 bits (462), Expect = 1e-46, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 20/181 (11%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L+K +++GD VGKT L+ Y F +Y T+ D + VMVD + V + +WDTAG Sbjct: 155 LIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVF-DNYSANVMVDGKPVNLGLWDTAGL 213 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLD-SWRDEFLIQASPRDPENFPFVVLGNK 126 E + L Y D ++ F + +P +F + W E N P +++G K Sbjct: 214 EDYDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHC-----PNTPIILVGTK 268 Query: 127 IDLENRQVATK-------------RAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 173 +DL + + + + A + Y E SA ++ F R Sbjct: 269 LDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAV 328 Query: 174 L 174 L Sbjct: 329 L 329 >2W2X-A nrPDB Length = 185 Score = 182 bits (462), Expect = 1e-46, Method: Composition-based stats. Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 20/187 (10%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 61 S +K +++GD VGKT L+ Y F +Y T+ D + VMVD + V + + Sbjct: 3 GSGGSQAIKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVF-DNYSANVMVDSKPVNLGL 61 Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLD-SWRDEFLIQASPRDPENFPF 120 WDTAGQE + L Y D ++ F + +P +++ + W E + P Sbjct: 62 WDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHC-----PSTPI 116 Query: 121 VVLGNKIDLENRQVATK-------------RAQAWCYSKNNIPYFETSAKEAINVEQAFQ 167 +++G K+DL + + + + A +++ Y E SA ++ F Sbjct: 117 ILVGTKLDLRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFD 176 Query: 168 TIARNAL 174 R L Sbjct: 177 EAIRAVL 183 >6FF8-A nrPDB Length = 181 Score = 182 bits (461), Expect = 1e-46, Method: Composition-based stats. Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 2/180 (1%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRL-VTMQ 60 ++ L KV+++G+ GVGKTS++ +YV++ FS Y+ATIG DF K + D R V +Q Sbjct: 2 METREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 61 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 +WD AG ERF ++ +Y+ A +VFD++ +TF+ + W+ + + + P Sbjct: 62 LWDIAGLERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 121 Query: 121 VVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 V+L NK D ++ + + +C +FETSAK+ IN+E+A + + L Sbjct: 122 VLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQS 181 >5WDQ-A nrPDB Length = 170 Score = 181 bits (459), Expect = 2e-46, Method: Composition-based stats. Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 5/156 (3%) Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG 80 K++L Q + F ++Y TI D K+V++D + I DTAGQE + ++ + R Sbjct: 20 KSALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 78 Query: 81 ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQ 140 + + VF + +F+ + +R++ +D ++ P V++GNK D R V +++AQ Sbjct: 79 GEGFLCVFAINNTKSFEDIHQYREQIK---RVKDSDDVPMVLVGNKCDAAARTVESRQAQ 135 Query: 141 AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 S IPY ETSAK VE AF T+ R + Sbjct: 136 DLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQH 170 >2P5S-A nrPDB Length = 199 Score = 180 bits (457), Expect = 4e-46, Method: Composition-based stats. Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 10/174 (5%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 K+++ GD+ VGK+S + + +F AT+G DF K ++VD +Q+WDTAGQE Sbjct: 29 YKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQE 88 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF+S+ +++R AD +L++DVT +F + W D A E P +++GNK D Sbjct: 89 RFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDAAH----ETVPIMLVGNKAD 144 Query: 129 LENRQVATKRA------QAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 + + + + ETSAK+ N+ +A +AR K+ Sbjct: 145 IRDTAATEGQKCVPGHFGEKLAMTYGALFCETSAKDGSNIVEAVLHLAREVKKR 198 >3A58-B nrPDB Length = 188 Score = 178 bits (451), Expect = 2e-45, Method: Composition-based stats. Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 20/179 (11%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K++I+GD GKT L+ +F Y T+ + +V VD R V + +WDTAGQE Sbjct: 12 KLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFEN-YVADVEVDGRRVELALWDTAGQED 70 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKID 128 + L Y ++ ++ F + P++ + + + W E L + P +++G K+D Sbjct: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-----HFCQGVPIILVGCKVD 125 Query: 129 LENR-------------QVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 L N V ++ Q+ Y+E SAK V + F+ R +L Sbjct: 126 LRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 >1RYH-A nrPDB Length = 203 Score = 177 bits (448), Expect = 4e-45, Method: Composition-based stats. Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 39/199 (19%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +K +++GD VGKT L+ Y F +Y T+ D + VMVD + V + +WDTAGQE Sbjct: 6 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVF-DNYSANVMVDGKPVNLGLWDTAGQE 64 Query: 69 RFQSLGVAFYRG-------------------ADCCVLVFDVTAPNTFKTLD-SWRDEFLI 108 + L Y AD ++ F + +P +F+ + W E Sbjct: 65 DYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEVRH 124 Query: 109 QASPRDPENFPFVVLGNKIDLENRQVATK-------------RAQAWCYSKNNIPYFETS 155 N P +++G K+DL + + + + A + Y E S Sbjct: 125 HC-----PNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECS 179 Query: 156 AKEAINVEQAFQTIARNAL 174 A ++ F R L Sbjct: 180 ALTQRGLKTVFDEAIRAVL 198 >2FN4-A nrPDB Length = 181 Score = 176 bits (446), Expect = 8e-45, Method: Composition-based stats. Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 6/160 (3%) Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG 80 K++L Q++ F + Y TI D TK VD + I DTAGQE F ++ + R Sbjct: 22 KSALTIQFIQSYFVSDYDPTI-EDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRA 80 Query: 81 ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLEN-RQVATKRA 139 +LVF + +F + + L +D ++FP V++GNK DLE+ RQV A Sbjct: 81 GHGFLLVFAINDRQSFNEVGKLFTQIL---RVKDRDDFPVVLVGNKADLESQRQVPRSEA 137 Query: 140 QAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 A+ S + + YFE SAK +NV++AF+ + R K + + Sbjct: 138 SAFGASHH-VAYFEASAKLRLNVDEAFEQLVRAVRKYQEQ 176 >3CBQ-A nrPDB Length = 195 Score = 175 bits (443), Expect = 2e-44, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 6/181 (3%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 62 +K + KV+++G+SGVGK++L + + + ++ D + +MVD VT+ ++ Sbjct: 18 GQKDGIFKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTLVVY 77 Query: 63 DTAGQ-ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121 D Q + L + D ++VF VT +F + + L + R + P + Sbjct: 78 DIWEQGDAGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVP---ETLLRLRAGRPHHDLPVI 134 Query: 122 VLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180 ++GNK DL +R+V+ + + + + + ETSA N + F+ R + Sbjct: 135 LVGNKSDLARSREVSLEEGRHLAGT-LSCKHIETSAALHHNTRELFEGAVRQIRLRRGRN 193 Query: 181 E 181 Sbjct: 194 H 194 >2ERY-A nrPDB Length = 172 Score = 173 bits (440), Expect = 4e-44, Method: Composition-based stats. Identities = 50/159 (31%), Positives = 86/159 (54%), Gaps = 4/159 (2%) Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG 80 K++L Q++ F Y TI D TK+ ++DDR + I DTAGQE F ++ + R Sbjct: 18 KSALTIQFIQSYFVTDYDPTI-EDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRT 76 Query: 81 ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQ 140 + +LVF VT +F+ + ++ + L +D + FP +++GNK DL++++ T+ Sbjct: 77 GEGFLLVFSVTDRGSFEEIYKFQRQIL---RVKDRDEFPMILIGNKADLDHQRQVTQEEG 133 Query: 141 AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 + + Y E SAK +NV+QAF + R K + + Sbjct: 134 QQLARQLKVTYMEASAKIRMNVDQAFHELVRVIRKFQEQ 172 >2ATX-A nrPDB Length = 194 Score = 173 bits (439), Expect = 5e-44, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 20/182 (10%) Query: 7 VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66 ++LK +++GD VGKT L+ Y N F +Y T+ D V V + + ++DTAG Sbjct: 17 LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVF-DHYAVSVTVGGKQYLLGLYDTAG 75 Query: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLD-SWRDEFLIQASPRDPENFPFVVLGN 125 QE + L Y D ++ F V P +F+ + W E A N PF+++G Sbjct: 76 QEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-----PNVPFLLIGT 130 Query: 126 KIDLEN-------------RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN 172 +IDL + + + ++ Q Y E SA ++ F Sbjct: 131 QIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIA 190 Query: 173 AL 174 L Sbjct: 191 IL 192 >5ZVP-A nrPDB Length = 181 Score = 173 bits (438), Expect = 6e-44, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 20/179 (11%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K++I+GD GKT L+ F Y T+ + +V VD + V + +WDTAGQE Sbjct: 7 KLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFEN-YVADVEVDGKHVELALWDTAGQED 65 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKID 128 + L Y + ++ F + +P++ + + W E L + P +++G K D Sbjct: 66 YDRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVL-----HFCQGLPIILVGCKKD 120 Query: 129 LEN-------------RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 L + + V ++ + Y E SA+ V + F+ R AL Sbjct: 121 LRHDPKTIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRAAL 179 >5VCU-A nrPDB Length = 208 Score = 173 bits (438), Expect = 6e-44, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 20/182 (10%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +K +++GD VGKT+L+ Y + F Y T+ D K + D +V++ ++DTAGQE Sbjct: 12 IKCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVF-DNYNKNIPYGDGIVSIALYDTAGQE 70 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKI 127 + L Y D ++ F + PN+ + W +E + P V++G K+ Sbjct: 71 DYDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEEL-----KHYNPDTPIVLVGTKL 125 Query: 128 DLENRQ-------------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 DL+ + V T++ Q Y E SAK N+ +AF A+ Sbjct: 126 DLKKDEEYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAIDIAM 185 Query: 175 KQ 176 KQ Sbjct: 186 KQ 187 >2ERX-A nrPDB Length = 172 Score = 172 bits (437), Expect = 8e-44, Method: Composition-based stats. Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 5/162 (3%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +V + G GVGK+SL+ ++V F Y T+ D + + D + T+QI DT G Sbjct: 4 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTV-EDTYRQVISCDKSICTLQITDTTGSH 62 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 +F ++ +LV+ +T+ + + L ++ D E+ P +++GNK D Sbjct: 63 QFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQI--CEIKGDVESIPIMLVGNKCD 120 Query: 129 L-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169 +R+V + A+A + + ETSAK NV++ FQ + Sbjct: 121 ESPSREVQSSEAEALARTWK-CAFMETSAKLNHNVKELFQEL 161 >4FMC-F nrPDB Length = 117 Score = 172 bits (437), Expect = 8e-44, Method: Composition-based stats. Identities = 46/119 (38%), Positives = 77/119 (64%), Gaps = 4/119 (3%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERF 70 ++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + + +D + + +QIWDTAGQERF Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 60 Query: 71 QSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 +++ ++YRGA ++V+DVT +F + W E AS EN +++GNK DL Sbjct: 61 RTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAS----ENVNKLLVGNKCDL 115 >3PIR-A nrPDB Length = 183 Score = 172 bits (435), Expect = 1e-43, Method: Composition-based stats. Identities = 50/157 (31%), Positives = 85/157 (54%), Gaps = 5/157 (3%) Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG 80 K++L Q+ K F +Y TI D K +D++ + + DTAGQE F ++ + R Sbjct: 31 KSALTIQFFQKIFVPEYDPTI-EDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRT 89 Query: 81 ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQ 140 D ++V+ VT +F+ +D + L +D E+FP +++ NK+DL + + T+ Sbjct: 90 GDGFLIVYSVTDKASFEHVDRFHQLIL---RVKDRESFPMILVANKVDLMHLRKVTRDQG 146 Query: 141 AWCYSKNNIPYFETSAKE-AINVEQAFQTIARNALKQ 176 +K NIPY ETSAK+ +NV++ F + R +Q Sbjct: 147 KEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQQ 183 >4MIT-A nrPDB Length = 186 Score = 171 bits (433), Expect = 2e-43, Method: Composition-based stats. Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 20/189 (10%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 61 S K +K++++GD VGKT L+ Y +KF Y T+ D + R + + + Sbjct: 4 MSEKPTSIKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVF-DNYVVSLTAGTRQIQLAL 62 Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKT-LDSWRDEFLIQASPRDPENFPF 120 WDTAG E + L Y A ++ F VT+ ++ + W E + P Sbjct: 63 WDTAGLEEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVI-----HFAPKVPI 117 Query: 121 VVLGNKIDLENRQVATKR-------------AQAWCYSKNNIPYFETSAKEAINVEQAFQ 167 +++G K+D N KR + + Y E SAK + N++ F Sbjct: 118 ILVGTKLDTRNDPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFD 177 Query: 168 TIARNALKQ 176 + L Sbjct: 178 EAVKTVLMN 186 >3VHL-B nrPDB Length = 195 Score = 171 bits (433), Expect = 2e-43, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 20/184 (10%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +K +++GD VGK L+ Y KF ++Y T+ D VM+ T+ ++DTAGQE Sbjct: 11 IKCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVF-DNYAVTVMIGGEPYTLGLFDTAGQE 69 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLD-SWRDEFLIQASPRDPENFPFVVLGNKI 127 + L Y D ++ F V +P++F+ + W E PF+++G +I Sbjct: 70 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-----PKTPFLLVGTQI 124 Query: 128 DLEN-------------RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 DL + + + + A+ + Y E SA ++ F AL Sbjct: 125 DLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 184 Query: 175 KQET 178 + Sbjct: 185 EPPE 188 >4DJT-A nrPDB Length = 218 Score = 169 bits (429), Expect = 6e-43, Method: Composition-based stats. Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 5/203 (2%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTMQ 60 R+++ K+ ++GD GVGKT+ +N+ ++ +F Y AT+GA + D ++ Sbjct: 5 MERRELTYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFN 64 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 +WDTAGQE+ L +Y GA +L FDVT+ T + L W EF P Sbjct: 65 VWDTAGQEKKAVLKDVYYIGASGAILFFDVTSRITCQNLARWVKEFQAVVGNE----API 120 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180 VV NKID++NRQ +K+ N YFE SAK A N F +AR + + Sbjct: 121 VVCANKIDIKNRQKISKKLVMEVLKGKNYEYFEISAKTAHNFGLPFLHLARIFTGRPDLI 180 Query: 181 ELYNEFPEPIKLDKNERAKASAE 203 + N EP +++ + + ++ Sbjct: 181 FVSNVNLEPTEVNYDYHSPEESK 203 >2ATV-A nrPDB Length = 196 Score = 167 bits (422), Expect = 4e-42, Method: Composition-based stats. Identities = 49/174 (28%), Positives = 93/174 (53%), Gaps = 8/174 (4%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDT 64 K +K+ I G +GVGK++L+ +++ K+F +Y T+ + +DD +V+M+I DT Sbjct: 25 KSAEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTL-ESTYRHQATIDDEVVSMEILDT 83 Query: 65 AGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLG 124 AGQE R + VLV+D+T +F+ + ++ I + P+N +++G Sbjct: 84 AGQED-TIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKN---ILDEIKKPKNVTLILVG 139 Query: 125 NKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAI-NVEQAFQTIARNALKQ 176 NK DL++ RQV+T+ + ++ ++E SA N+ + F + R ++ Sbjct: 140 NKADLDHSRQVSTEEGEKLA-TELACAFYECSACTGEGNITEIFYELCREVRRR 192 >2Q3H-A nrPDB Length = 201 Score = 166 bits (421), Expect = 6e-42, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 20/187 (10%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +K +++GD VGKTSL+ Y + +Y T +F + V VD R V +Q+ DTAGQ+ Sbjct: 21 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNF-SAVVSVDGRPVRLQLCDTAGQD 79 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKI 127 F L Y D +L F V +P++F+ + + W E P +++G + Sbjct: 80 EFDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHC-----PKAPIILVGTQS 134 Query: 128 DLENRQ-------------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 DL V + A+ Y E SA N+++ F + Sbjct: 135 DLREDVKVLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVFDAAIVAGI 194 Query: 175 KQETEVE 181 + + Sbjct: 195 QYSDTQQ 201 >2G3Y-A nrPDB Length = 211 Score = 166 bits (420), Expect = 8e-42, Method: Composition-based stats. Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 11/185 (5%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATI-GADFLTKEVMVDDR---LV 57 + +V+++G+ GVGK++L N + S + G D + +MVD ++ Sbjct: 31 SESGNTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATII 90 Query: 58 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPEN 117 + +W+ G+ + L + D ++V+ +T +F+ R + R E+ Sbjct: 91 LLDMWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQL---RRARQTED 145 Query: 118 FPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 P +++GNK DL R+V+ +A C + + ETSA NV++ F+ I R + Sbjct: 146 IPIILVGNKSDLVRCREVSVSEGRA-CAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLR 204 Query: 177 ETEVE 181 E Sbjct: 205 RDSKE 209 >3T5G-A nrPDB Length = 181 Score = 165 bits (418), Expect = 1e-41, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 4/171 (2%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K+ ILG VGK+SL Q+V +F + Y TI + TK + V+ + +Q+ DTAGQ+ Sbjct: 8 KIAILGYRSVGKSSLTIQFVEGQFVDSYDPTI-ENTFTKLITVNGQEYHLQLVDTAGQDE 66 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 + + + +LV+ VT+ +F+ + + L P +++GNK DL Sbjct: 67 YSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQ---IPIMLVGNKKDL 123 Query: 130 ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180 +V + N + E+SAKE F+ I A K + Sbjct: 124 HMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEAEKMDGAC 174 >3Q85-A nrPDB Length = 169 Score = 165 bits (418), Expect = 1e-41, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 6/169 (3%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 + KV+++G+SGVGK++L + + + ++ D + +MVD VT+ ++D Q Sbjct: 2 VFKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDIWEQ 61 Query: 68 -ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNK 126 + L + D ++VF VT +F + + L + R + P +++GNK Sbjct: 62 GDAGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVP---ETLLRLRAGRPHHDLPVILVGNK 118 Query: 127 IDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 DL +R+V+ + + + + + ETSA N + F+ R Sbjct: 119 SDLARSREVSLEEGRHLAGT-LSCKHIETSAALHHNTRELFEGAVRQIR 166 >3RAP-R nrPDB Length = 167 Score = 165 bits (417), Expect = 2e-41, Method: Composition-based stats. Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 4/153 (2%) Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG 80 K++L Q+V F +Y TI DF KE+ VD ++I DTAG E+F S+ + + Sbjct: 16 KSALTVQFVTGTFIEKYDPTI-EDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKN 74 Query: 81 ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQ 140 +LV+ + +F+ + RD+ + + E P +++GNK+DLE+ + + Sbjct: 75 GQGFILVYSLVNQQSFQDIKPMRDQII---RVKRYEKVPVILVGNKVDLESEREVSSSEG 131 Query: 141 AWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 173 + P+ ETSAK V++ F I R Sbjct: 132 RALAEEWGCPFMETSAKSKTMVDELFAEIVRQM 164 >2CJW-A nrPDB Length = 192 Score = 163 bits (414), Expect = 3e-41, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 11/178 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATI-GADFLTKEVMVDDR---LVTMQIWDT 64 +V+++G+ GVGK++L N + S + G D + +MVD ++ + +W+ Sbjct: 7 YRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWEN 66 Query: 65 AGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLG 124 G+ + L + D ++V+ +T +F+ R + R E+ P +++G Sbjct: 67 KGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQL---RRARQTEDIPIILVG 121 Query: 125 NKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVE 181 NK DL R+V+ +A C + + ETSA NV++ F+ I R + E Sbjct: 122 NKSDLVRCREVSVSEGRA-CAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLRRDSKE 178 >3Q72-A nrPDB Length = 166 Score = 162 bits (410), Expect = 1e-40, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 7/168 (4%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 + KV++LG GVGK++L + + +A + ++VD ++ ++D Q Sbjct: 2 VYKVLLLGAPGVGKSALARIF--GGVEDGPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQ 59 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 + + L D V+V+ VT +F+ R + R ++ P +++GNK Sbjct: 60 DGGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQL---RRARQTDDVPIILVGNKS 116 Query: 128 DL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 DL +R+V+ +A C + + ETSA NV+ F+ + R Sbjct: 117 DLVRSREVSVDEGRA-CAVVFDCKFIETSAALHHNVQALFEGVVRQIR 163 >3OES-A nrPDB Length = 201 Score = 160 bits (406), Expect = 3e-40, Method: Composition-based stats. Identities = 57/180 (31%), Positives = 87/180 (48%), Gaps = 12/180 (6%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 KV+ILG VGKTSL +Q+V +FS Y T+ + +K V + + + DTAGQ+ Sbjct: 26 KVVILGYRCVGKTSLAHQFVEGEFSEGYDPTV-ENTYSKIVTLGKDEFHLHLVDTAGQDE 84 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 + L +F G VLV+ VT+ ++F+ ++S + P V++GNK DL Sbjct: 85 YSILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKL---HEGHGKTRVPVVLVGNKADL 141 Query: 130 -ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAF----QTIAR--NALKQETEVEL 182 R+V + S + E+SA+E + F Q IAR N+ QE L Sbjct: 142 SPEREVQAVEGKKLAESW-GATFMESSARENQLTQGIFTKVIQEIARVENSYGQERRCHL 200 >3E5H-A nrPDB Length = 178 Score = 160 bits (405), Expect = 4e-40, Method: Composition-based stats. Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 4/168 (2%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRL-VTMQIWDTAGQ 67 LK+++LGD GKTSL + + F QYK TIG DF + + + L VT+QIWD GQ Sbjct: 7 LKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQ 66 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 + + GA +LV+D+T +F+ L+ W + + + ++GNKI Sbjct: 67 TIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETQPL-VALVGNKI 125 Query: 128 DLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 DLE+ R + ++ +C +F SAK +V FQ +A L Sbjct: 126 DLEHMRTIKPEKHLRFCQENGFSSHF-VSAKTGDSVFLCFQKVAAEIL 172 >2GF0-A nrPDB Length = 199 Score = 158 bits (400), Expect = 2e-39, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 4/181 (2%) Query: 21 KTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG 80 K+SL+ ++V F + Y TI D + + D + T+QI DT G +F ++ Sbjct: 21 KSSLVLRFVKGTFRDTYIPTI-EDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISK 79 Query: 81 ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQ 140 +LVF VT+ + + L LI E+ P +++GNK D R+V T+ AQ Sbjct: 80 GHAFILVFSVTSKQSLEELGPIYK--LIVQIKGSVEDIPVMLVGNKCDETQREVDTREAQ 137 Query: 141 AWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDKNERAKA 200 A + + ETSAK NV++ FQ + ++ + + + K + K Sbjct: 138 AVA-QEWKCAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDGKRSGKQKRTDRVKGKC 196 Query: 201 S 201 + Sbjct: 197 T 197 >3CLV-A nrPDB Length = 208 Score = 158 bits (399), Expect = 2e-39, Method: Composition-based stats. Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 44/210 (20%) Query: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRL------- 56 KK K ++LG+S VGK+S++ + F TIGA F T V ++D Sbjct: 3 EKKSSYKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNN 62 Query: 57 ------------------------------VTMQIWDTAGQERFQSLGVAFYRGADCCVL 86 + IWDTAGQER+ S+ +YRGA C ++ Sbjct: 63 EKNNNINSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCAIV 122 Query: 87 VFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSK 146 VFD++ NT +W ++ I N+ +++ NKID QV Q + Sbjct: 123 VFDISNSNTLDRAKTWVNQLKI------SSNYIIILVANKIDKNKFQVDILEVQKYA-QD 175 Query: 147 NNIPYFETSAKEAINVEQAFQTIARNALKQ 176 NN+ + +TSAK N++ F +A K Sbjct: 176 NNLLFIQTSAKTGTNIKNIFYMLAEEIYKN 205 >2NZJ-A nrPDB Length = 175 Score = 156 bits (395), Expect = 6e-39, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 6/163 (3%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 L +V++LGD GVGKTSL + + K+ + ++ +G D + + VD T+ + DT Sbjct: 4 LYRVVLLGDPGVGKTSLASLFAGKQERDLHEQ-LGEDVYERTLTVDGEDTTLVVVDTWEA 62 Query: 68 ERFQSLGV--AFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125 E+ + +G V+V+ + +F++ R + ++ P +++GN Sbjct: 63 EKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQL---RRTHQADHVPIILVGN 119 Query: 126 KIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQT 168 K DL + + C + + ETSA NV + F+ Sbjct: 120 KADLARCREVSVEEGRACAVVFDCKFIETSATLQHNVAELFEG 162 >1GWN-A nrPDB Length = 205 Score = 156 bits (394), Expect = 8e-39, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 21/182 (11%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M + V K++++GDS GKT+L++ + F Y T+ + T +D + + + Sbjct: 21 MDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFEN-YTASFEIDTQRIELS 79 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFP 119 +WDT+G + ++ Y +D ++ FD++ P T ++ W+ E N Sbjct: 80 LWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFC-----PNTK 134 Query: 120 FVVLGNKIDLE-----------NRQ--VATKRAQAWCYSKNNIPYFETSAKEAIN-VEQA 165 +++G K DL +RQ V+ + Y E SA ++ N V Sbjct: 135 MLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDI 194 Query: 166 FQ 167 F Sbjct: 195 FH 196 >5XC3-A nrPDB Length = 176 Score = 155 bits (393), Expect = 1e-38, Method: Composition-based stats. Identities = 52/168 (30%), Positives = 93/168 (55%), Gaps = 8/168 (4%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV-DDRLVTMQIWDTAGQ 67 K+I++G SGVGK+S+++Q++ + + TIGA F +K+V+ + + + + IWDTAGQ Sbjct: 6 YKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQ 65 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ERF+S+ +Y + C++VFDVT +F + W ++ I + +V+ NKI Sbjct: 66 ERFRSITKMYYTNSLGCLVVFDVTDRESFDDVYYWINDLRINCHT----TYYILVVANKI 121 Query: 128 DLE--NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 173 D++ N +V+ + +C N+ Y S+ E+ V F + Sbjct: 122 DIDKNNWRVSENEIKKFCRD-NDCDYVFASSFESDTVNNLFGKMIDKM 168 >3REG-A nrPDB Length = 194 Score = 155 bits (393), Expect = 1e-38, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 72/180 (40%), Gaps = 10/180 (5%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 62 K LK++++GD VGKT L+ + + Y T+ +F + + + + +W Sbjct: 18 ENGKKALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENF-SHVMKYKNEEFILHLW 76 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLD-SWRDEFLIQASPRDPENFPFV 121 DTAGQE + L Y +D +L F V +F + W E + V Sbjct: 77 DTAGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEI-----KHYIDTAKTV 131 Query: 122 VLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQET 178 ++G K+DL + V + C + Y E S+ I + + F+ + Sbjct: 132 LVGLKVDLRKDGSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSVDCIFSNKP 191 >1M7B-A nrPDB Length = 184 Score = 152 bits (385), Expect = 9e-38, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 21/181 (11%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 61 S + V K++++GDS GKT+L++ + F Y T+ + T +D + + + + Sbjct: 1 GSNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFEN-YTASFEIDTQRIELSL 59 Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPF 120 WDT+G + ++ Y +D ++ FD++ P T ++ W+ E N Sbjct: 60 WDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFC-----PNTKM 114 Query: 121 VVLGNKIDLE-----------NRQ--VATKRAQAWCYSKNNIPYFETSAKEAIN-VEQAF 166 +++G K DL +RQ V+ + Y E SA ++ N V F Sbjct: 115 LLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIF 174 Query: 167 Q 167 Sbjct: 175 H 175 >3C5C-A nrPDB Length = 187 Score = 137 bits (346), Expect = 3e-33, Method: Composition-based stats. Identities = 41/174 (23%), Positives = 84/174 (48%), Gaps = 4/174 (2%) Query: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63 + + + + ILG G GK++L +++ K+F ++Y + D + E VD + V +++ D Sbjct: 17 QGPLEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNL-EDTYSSEETVDHQPVHLRVMD 75 Query: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123 TA + ++ + A ++V+ V + +F + S+ E L + + P ++L Sbjct: 76 TADLDTPRNC-ERYLNWAHAFLVVYSVDSRQSFDSSSSYL-ELLALHAKETQRSIPALLL 133 Query: 124 GNKIDLENRQVATKRAQAWCYSKNNIPYFETSA-KEAINVEQAFQTIARNALKQ 176 GNK+D+ + TK + +FE SA + +V+ F R A ++ Sbjct: 134 GNKLDMAQYRQVTKAEGVALAGRFGCLFFEVSACLDFEHVQHVFHEAVREARRE 187 >2AL7-A nrPDB Length = 186 Score = 136 bits (344), Expect = 4e-33, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 10/171 (5%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +++ ++G GKT+ +N + +FS T+G F ++V + VT++IWD GQ Sbjct: 23 MELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVTKGN--VTIKIWDIGGQP 78 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF+S+ + RG + V + D + +++ R+E + P +VLGNK D Sbjct: 79 RFRSMWERYCRGVNAIVYMIDAADR---EKIEASRNELHNLLDKPQLQGIPVLVLGNKRD 135 Query: 129 LE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 L + + ++ I + S KE N++ Q + +++ + Sbjct: 136 LPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQHSKSR 186 >4ILE-A nrPDB Length = 184 Score = 135 bits (340), Expect = 1e-32, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 78/169 (46%), Gaps = 10/169 (5%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +++ ++G GKT+ +N + +F+ T+G F +++ + VT+++WD GQ Sbjct: 23 MELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVG--FNMRKITKGN--VTIKLWDIGGQP 78 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 RF+S+ + RG V + D + +++ ++E + P +VLGNK D Sbjct: 79 RFRSMWERYCRGVSAIVYMVDAADQ---EKIEASKNELHNLLDKPQLQGIPVLVLGNKRD 135 Query: 129 LE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 L + + ++ I + S KE N++ Q + +++ Sbjct: 136 LPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQHSR 184 >5C1S-A nrPDB Length = 391 Score = 131 bits (330), Expect = 2e-31, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 86/175 (49%), Gaps = 13/175 (7%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++++++G SGVGKT+L + + S G + K V +D+ + + I D AGQ+ Sbjct: 63 IRLLVVGSSGVGKTTLCDCFFESHQSQ------GEETREKHVQIDNDFIRISISDIAGQQ 116 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDS-WRDEFLIQASPRDPENFPFVVLGNKI 127 F + Y G D ++++D+T +F L + W + + + + +++GNK Sbjct: 117 SFYACDNP-YDGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNI----DTQIIIIGNKK 171 Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVEL 182 D E ++ T++ ++E S K+ + + F I+R+ L+ + ++ + Sbjct: 172 DQEIDRIITRKEAEQFAQDRLCQFYEISTKD-DSCQLLFDCISRDFLQCDIKIRM 225 Score = 81.1 bits (199), Expect = 3e-16, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 71/183 (38%), Gaps = 14/183 (7%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFL---TKEVMVDDRLVTMQIW 62 + ++++++GD VGKT+ + ++ T G DF+ T ++ + + Sbjct: 220 DIKIRMLMVGDQNVGKTTFIRKFA------LQDPT-GHDFMNAITTRFEMEKIKYEIIMI 272 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 D + A R + ++V+D+T +F+ + + + V+ Sbjct: 273 DWGFYNKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNK----FSDVAGVI 328 Query: 123 LGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVEL 182 +G K DLE ++ T Y E S+K+ + + +A + ++E Sbjct: 329 VGYKTDLEAQRKITMGDALTLADWLGYKYVEMSSKDTEDHSSIIKALAHSIRINRLKIEQ 388 Query: 183 YNE 185 E Sbjct: 389 SYE 391 >5HZH-A nrPDB Length = 332 Score = 128 bits (323), Expect = 1e-30, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 55/146 (37%), Gaps = 19/146 (13%) Query: 43 ADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLD-S 101 D KE+ + V + +WDTAG E + L Y D ++ F + +P +F+ + Sbjct: 189 IDEAAKELGSGGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAK 248 Query: 102 WRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATK-------------RAQAWCYSKNN 148 W E N P +++G K+DL + + + + A Sbjct: 249 WYPEVRHHC-----PNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGA 303 Query: 149 IPYFETSAKEAINVEQAFQTIARNAL 174 + Y E SA ++ F R L Sbjct: 304 VKYLECSALTQRGLKTVFDEAIRAVL 329 Score = 64.9 bits (157), Expect = 2e-11, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDD 54 +K +++GD VGKT L+ Y F +Y T+ D + VMVD Sbjct: 7 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVF-DNYSANVMVDG 51 >3IHW-A nrPDB Length = 184 Score = 127 bits (319), Expect = 4e-30, Method: Composition-based stats. Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 13/169 (7%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 LKV I+G+ GK++L+++Y+ + + G F KE++VD + + I D G Sbjct: 21 LKVGIVGNLSSGKSALVHRYLTGTYVQEESPE-GGRFK-KEIVVDGQSYLLLIRDEGGPP 78 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNK-- 126 Q F D V VF + +F+T+ ++ FL S R+ P V++G + Sbjct: 79 ELQ-----FAAWVDAVVFVFSLEDEISFQTVYNY---FLRLCSFRNASEVPMVLVGTQDA 130 Query: 127 IDLENRQVATK-RAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 I N +V RA+ Y+ET A +NVE+ FQ +A+ + Sbjct: 131 ISAANPRVIDDSRARKLSTDLKRCTYYETCATYGLNVERVFQDVAQKVV 179 >2YC4-C nrPDB Length = 208 Score = 126 bits (316), Expect = 9e-30, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 15/187 (8%) Query: 10 KVIILGDSGVGKTSLMNQYV--NKKFSNQYKATIGADFLTKEVMVDDRLVT--MQIWDTA 65 KV ++G++ VGK++L++ + KF Y T G + + V + D V+ + + DTA Sbjct: 22 KVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELFLLDTA 81 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125 G + ++ ++ G +LVFDV++ +F++ +W E L A P V++ N Sbjct: 82 GSDLYKEQISQYWNGVYYAILVFDVSSMESFESCKAWF-ELLKSARPDRERPLRAVLVAN 140 Query: 126 KIDLE--NRQVATKRAQAWCYSKNNIPYFETSA----KEAINVEQAFQTIARNALKQETE 179 K DL QV AQ W + N + +F+ SA K+A + F +IA + + Sbjct: 141 KTDLPPQRHQVRLDMAQDWA-TTNTLDFFDVSANPPGKDA---DAPFLSIATTFYRNYED 196 Query: 180 VELYNEF 186 + Sbjct: 197 KVAAFQD 203 >2REX-B nrPDB Length = 197 Score = 124 bits (312), Expect = 2e-29, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 77/184 (41%), Gaps = 21/184 (11%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K++++GD GKT+++ + Y T+ + T + +++ V + +WDT+G Sbjct: 12 KLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFEN-YTACLETEEQRVELSLWDTSGSPY 70 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFK-TLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + ++ Y +D +L FD++ P T L WR E L + +++G K D Sbjct: 71 YDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYC-----PSTRVLLIGCKTD 125 Query: 129 LENR-------------QVATKRAQAWCYSKNNIPYFETSAKEAI-NVEQAFQTIARNAL 174 L ++ ++ A Y E SA + ++ F+T + L Sbjct: 126 LRTDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTASMLCL 185 Query: 175 KQET 178 + + Sbjct: 186 NKPS 189 >2IWR-A nrPDB Length = 178 Score = 121 bits (303), Expect = 3e-28, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 11/177 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 L++ +LGD+ GK+SL+++++ + K ++ KE++VD + + I + AG Sbjct: 8 LRLGVLGDARSGKSSLIHRFLTGSYQVLEKTE--SEQYKKEMLVDGQTHLVLIREEAGAP 65 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN--K 126 F AD + VF + N+F+ + + ++G + Sbjct: 66 D-----AKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSL-RGEGRGGLALALVGTQDR 119 Query: 127 IDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVEL 182 I + R V RA+A C Y+ET A +NV++ FQ +A+ + + +L Sbjct: 120 ISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTLRKQQQL 176 >4WNR-A nrPDB Length = 349 Score = 117 bits (294), Expect = 3e-27, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 70/179 (39%), Gaps = 11/179 (6%) Query: 1 MTSRKKVL--LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVT 58 + KK L +KV+++GD GKTSL+ + + + F T G + D+ + Sbjct: 32 LEGEKKPLNEVKVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIK 91 Query: 59 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENF 118 + WD GQE + F +LV D + E+ ++ + Sbjct: 92 VNFWDFGGQEIMHATHQFFLSKRSLYILVLDSRRDE--------KAEYWLKHIRSFGGDS 143 Query: 119 PFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177 P +V NKID EN R + +F S KE +E Q + + LK E Sbjct: 144 PVLVALNKID-ENPSFELNRKFLQEKYPSIKGFFRISCKEDRGIEGFSQKLKKELLKVE 201 >5NZV-F nrPDB Length = 181 Score = 117 bits (294), Expect = 3e-27, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 12/173 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++++++G G GKT+++ + + TIG + T V + ++ +WD GQ+ Sbjct: 18 MRILMVGLDGAGKTTVLYKLKLGEVITT-IPTIGFNVET----VQYKNISFTVWDVGGQD 72 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 R +SL +YR + + V D + + R+ + + N ++V NK D Sbjct: 73 RIRSLWRHYYRNTEGVIFVVDSNDRS---RIGEAREVMQRMLNEDELRNAAWLVFANKQD 129 Query: 129 LENRQVATKRAQAW-CYSKNNIPYF--ETSAKEAINVEQAFQTIARNALKQET 178 L A + + +S N P+F T A + + + ++ N+LK T Sbjct: 130 LPEAMSAAEITEKLGLHSIRNRPWFIQATCATSGEGLYEGLEWLS-NSLKNST 181 >3LRP-A nrPDB Length = 181 Score = 113 bits (282), Expect = 8e-26, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 69/164 (42%), Gaps = 11/164 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++++++G GKT+++ + + TIG + T V+ R ++ +WD GQ+ Sbjct: 18 VRILMVGLDAAGKTTILYKVKLGEVVTT-IPTIGFNVET----VEFRNISFTVWDVGGQD 72 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + + L +Y D + V D + +D R+E + + ++ +V NK D Sbjct: 73 KIRPLWRHYYSNTDGLIFVVDSNDR---ERIDDAREELHRMINEEELKDAIILVFANKQD 129 Query: 129 LENRQVATKRAQAW-CYSKNNIPYF--ETSAKEAINVEQAFQTI 169 L N A + + + +F T A + + F + Sbjct: 130 LPNAMSAAEVTEKLHLNTIRERNWFIQSTCATRGDGLYEGFDWL 173 >4YLG-A nrPDB Length = 173 Score = 111 bits (278), Expect = 2e-25, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 69/168 (41%), Gaps = 11/168 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++++++G GKTS++ + + TIG + T V+ + ++ +WD GQ+ Sbjct: 14 MRILMVGLDAAGKTSILYKLKLGEIVTT-IPTIGFNVET----VEYKNISFTVWDVGGQD 68 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + + L +Y+ + V D + R+E + + + N +V NK D Sbjct: 69 KIRPLWRHYYQNTQAIIFVVDSNDR---DRIGEAREELMKMLNEDEMRNAILLVFANKHD 125 Query: 129 LENRQVATKRAQAWCYS--KNNIPYFETS-AKEAINVEQAFQTIARNA 173 L ++ + KN Y +TS A + + +A N Sbjct: 126 LPQAMSISEVTEKLGLQTIKNRKWYCQTSCATNGDGLYEGLDWLADNL 173 >6FAE-B nrPDB Length = 213 Score = 110 bits (276), Expect = 4e-25, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 73/172 (42%), Gaps = 11/172 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++++++G GKT+++ + + TIG + T V+ + ++ +WD GQ+ Sbjct: 50 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVET----VEYKNISFTVWDVGGQD 104 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + + L +++ + V D + ++ R+E + + + + +V NK D Sbjct: 105 KIRPLWRHYFQNTQGLIFVVDSNDR---ERVNEAREELMRMLAEDELRDAVLLVFANKQD 161 Query: 129 LENRQVATK-RAQAWCYSKNNIPYF--ETSAKEAINVEQAFQTIARNALKQE 177 L N A + + +S + ++ T A + + ++ Q+ Sbjct: 162 LPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK 213 >3O47-A nrPDB Length = 329 Score = 110 bits (275), Expect = 5e-25, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 73/172 (42%), Gaps = 11/172 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++++++G GKT+++ + + TIG + T V+ + ++ +WD GQ+ Sbjct: 166 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVET----VEYKNISFTVWDVGGQD 220 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + + L +++ + V D + ++ R+E + + + + +V NK D Sbjct: 221 KIRPLWRHYFQNTQGLIFVVDSNDR---ERVNEAREELMRMLAEDELRDAVLLVFANKQD 277 Query: 129 LENRQVATK-RAQAWCYSKNNIPYF--ETSAKEAINVEQAFQTIARNALKQE 177 L N A + + +S + ++ T A + + ++ Q+ Sbjct: 278 LPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK 329 >5EE5-B nrPDB Length = 171 Score = 110 bits (275), Expect = 5e-25, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 66/171 (38%), Gaps = 11/171 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++++ILG G GKT+++ + + TIG + T V + + Q+WD G Sbjct: 8 MRILILGLDGAGKTTILYRLQVGEVVTT-IPTIGFNVET----VTYKNLKFQVWDLGGLT 62 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + +Y D + V D + + E + + VV NK D Sbjct: 63 SIRPYWRCYYSNTDAVIYVVDSCDR---DRIGISKSELVAMLEEEELRKAILVVFANKQD 119 Query: 129 LENRQVATKRAQAW---CYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 +E +++ A + F+TSA + +++A + + + Sbjct: 120 MEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 170 >5UF8-A nrPDB Length = 181 Score = 110 bits (274), Expect = 7e-25, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 69/165 (41%), Gaps = 11/165 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++++++G GKT+++ + + TIG + T V+ + ++ +WD GQ+ Sbjct: 18 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVET----VEYKNISFTVWDVGGQD 72 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + + L +++ + V D + R+E + + + +V NK D Sbjct: 73 KIRPLWRYYFQNTQGIIFVVDSNDR---DRIAEAREELQQMLNEDELRDALLLVFANKQD 129 Query: 129 LENRQVATKRAQAW-CYSKNNIPYF--ETSAKEAINVEQAFQTIA 170 L N A + + +S P++ T A + + + ++ Sbjct: 130 LPNAMNAAEITEKLGLHSIRQRPWYIQATCATTGDGLYEGLEWLS 174 >6HLU-A nrPDB Length = 974 Score = 110 bits (274), Expect = 7e-25, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 68/174 (39%), Gaps = 16/174 (9%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE------VMVDD--RLVTMQ 60 +KV ++GD GKTSL+ Q + + F + T G + +TK+ + DD + Sbjct: 481 IKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFH 540 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 WD GQE + F + +L+ D DS + +L ++ P Sbjct: 541 FWDFGGQEIMHASHQFFMTRSSVYMLLLD-------SRTDSNKHYWLRHIEKYGGKS-PV 592 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 +V+ NKID ++ + + S K VE +++ L Sbjct: 593 IVVMNKIDENPSYNIEQKKINERFPAIENRFHRISCKNGDGVESIAKSLKSAVL 646 >1YZG-A nrPDB Length = 179 Score = 108 bits (270), Expect = 2e-24, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 66/168 (39%), Gaps = 11/168 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 KVII+G GKT+++ Q++ + + TIG++ V + +WD GQE Sbjct: 17 HKVIIVGLDNAGKTTILYQFLMNEVVHT-SPTIGSNVEEIVV----KNTHFLMWDIGGQE 71 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 +S +Y + +LV D + L ++E + D ++ NK D Sbjct: 72 SLRSSWNTYYSNTEFIILVVDSIDR---ERLAITKEELYRMLAHEDLRKAAVLIFANKQD 128 Query: 129 LENRQVATKRAQAW-CYSKNNIPYF--ETSAKEAINVEQAFQTIARNA 173 ++ A + ++ S + P+ A + Q + + Sbjct: 129 MKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTSRI 176 >1Z6X-A nrPDB Length = 180 Score = 108 bits (270), Expect = 2e-24, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 67/171 (39%), Gaps = 11/171 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++++++G GKT+++ + + TIG + T V+ + + +WD GQ+ Sbjct: 18 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVET----VEYKNICFTVWDVGGQD 72 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 R + L +++ + V D + + DE + + ++ NK D Sbjct: 73 RIRPLWKHYFQNTQGLIFVVDSNDRERIQEVA---DELQKMLLVDELRDAVLLLFANKQD 129 Query: 129 LENRQVATKRAQAW-CYSKNNIPYF--ETSAKEAINVEQAFQTIARNALKQ 176 L N ++ S N ++ T A + + + ++ K+ Sbjct: 130 LPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSKR 180 >3DPU-A nrPDB Length = 535 Score = 108 bits (270), Expect = 2e-24, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 68/174 (39%), Gaps = 16/174 (9%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE------VMVDD--RLVTMQ 60 +KV ++GD GKTSL+ Q + + F + T G + +TK+ + DD + Sbjct: 42 IKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFH 101 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 WD GQE + F + +L+ D DS + +L ++ P Sbjct: 102 FWDFGGQEIMHASHQFFMTRSSVYMLLLD-------SRTDSNKHYWLRHIEKYGGKS-PV 153 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 +V+ NKID ++ + + S K VE +++ L Sbjct: 154 IVVMNKIDENPSYNIEQKKINERFPAIENRFHRISCKNGDGVESIAKSLKSAVL 207 >6DFF-C nrPDB Length = 193 Score = 108 bits (270), Expect = 2e-24, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 72/172 (41%), Gaps = 11/172 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++++++G GKT+++ + + TIG + T V+ + ++ +WD G + Sbjct: 30 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVET----VEYKNISFTVWDVGGLD 84 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + + L +++ + V D + ++ R+E + + + + +V NK D Sbjct: 85 KIRPLWRHYFQNTQGLIFVVDSNDR---ERVNEAREELMRMLAEDELRDAVLLVFANKQD 141 Query: 129 LENRQVATK-RAQAWCYSKNNIPYF--ETSAKEAINVEQAFQTIARNALKQE 177 L N A + + +S + ++ T A + + ++ Q+ Sbjct: 142 LPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK 193 >1J2J-A nrPDB Length = 166 Score = 108 bits (269), Expect = 3e-24, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 72/172 (41%), Gaps = 11/172 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++++++G GKT+++ + + TIG + T V+ + ++ +WD G + Sbjct: 3 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVET----VEYKNISFTVWDVGGLD 57 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + + L +++ + V D + ++ R+E + + + + +V NK D Sbjct: 58 KIRPLWRHYFQNTQGLIFVVDSNDR---ERVNEAREELMRMLAEDELRDAVLLVFANKQD 114 Query: 129 LENRQVATK-RAQAWCYSKNNIPYF--ETSAKEAINVEQAFQTIARNALKQE 177 L N A + + +S + ++ T A + + ++ Q+ Sbjct: 115 LPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK 166 >3AQ4-A nrPDB Length = 184 Score = 106 bits (266), Expect = 5e-24, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 68/168 (40%), Gaps = 11/168 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++++++G GKT+++ + + TIG + T V+ + ++ +WD GQ+ Sbjct: 21 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVET----VEYKNISFTVWDVGGQD 75 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + + L +++ + V D + RDE + + + +V NK D Sbjct: 76 KIRPLWRHYFQNTQGLIFVVDSNDR---DRVVEARDELHRMLNEDELRDAVLLVFANKQD 132 Query: 129 LENRQVATK-RAQAWCYSKNNIPYF--ETSAKEAINVEQAFQTIARNA 173 L N A + + +S ++ T A + + ++ N Sbjct: 133 LPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 180 >2H16-A nrPDB Length = 183 Score = 106 bits (265), Expect = 7e-24, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 69/165 (41%), Gaps = 11/165 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 KVII+G GKT+++ Q+ + + TIG++ +E+++++ M WD GQE Sbjct: 23 HKVIIVGLDNAGKTTILYQFSMNEVVHT-SPTIGSNV--EEIVINNTRFLM--WDIGGQE 77 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 +S +Y + ++V D T + + R+E + D ++ NK D Sbjct: 78 SLRSSWNTYYTNTEFVIVVVDSTDR---ERISVTREELYKMLAHEDLRKAGLLIFANKQD 134 Query: 129 LENRQVATKRAQAW-CYSKNNIPYF--ETSAKEAINVEQAFQTIA 170 ++ + +Q S + + A + Q + + Sbjct: 135 VKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMM 179 >3D6T-B nrPDB Length = 171 Score = 105 bits (263), Expect = 1e-23, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 16/144 (11%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSN--QYKATIGADFLTKEVMVDDRL---VTMQIWD 63 +K++I+G++G GKT+L+ Q + K S+ AT+G D + + D+ + + +WD Sbjct: 1 MKLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWD 60 Query: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNT-FKTLDSWRDEFLIQASPRDPENFPFVV 122 AG+E F S F + V+D++ + W +AS + P ++ Sbjct: 61 FAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARAS-----SSPVIL 115 Query: 123 LGNKIDLENRQVATKRAQAWCYSK 146 +G +D V+ ++ + C SK Sbjct: 116 VGTHLD-----VSDEKQRKACMSK 134 >3LVQ-E nrPDB Length = 497 Score = 104 bits (261), Expect = 2e-23, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 64/164 (39%), Gaps = 11/164 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +++++LG GKT+++ + + S T+G + T V + V +WD GQ+ Sbjct: 323 MRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVET----VTYKNVKFNVWDVGGQD 377 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + + L +Y G + V D +D R E + R+ + ++ NK D Sbjct: 378 KIRPLWRHYYTGTQGLIFVVDCADR---DRIDEARQELHRIINDREMRDAIILIFANKQD 434 Query: 129 LENRQVATKRAQAW-CYSKNNIPYF--ETSAKEAINVEQAFQTI 169 L + + + + ++ + A + + + Sbjct: 435 LPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWL 478 >2B6H-A nrPDB Length = 192 Score = 104 bits (260), Expect = 3e-23, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 66/171 (38%), Gaps = 11/171 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++++++G GKT+++ + + TIG + T V+ + + +WD GQ+ Sbjct: 30 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVET----VEYKNICFTVWDVGGQD 84 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + + L +++ + V D + + DE + + +V NK D Sbjct: 85 KIRPLWRHYFQNTQGLIFVVDSNDR---ERVQESADELQKMLQEDELRDAVLLVFANKQD 141 Query: 129 LENRQ-VATKRAQAWCYSKNNIPYF--ETSAKEAINVEQAFQTIARNALKQ 176 + N V+ + + ++ T A + + ++ K+ Sbjct: 142 MPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR 192 >2A5F-A nrPDB Length = 175 Score = 103 bits (258), Expect = 5e-23, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 64/164 (39%), Gaps = 11/164 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +++++LG GKT+++ + + S T+G + T V + V +WD GQ+ Sbjct: 14 MRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVET----VTYKNVKFNVWDVGGQD 68 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + + L +Y G + V D +D R E + R+ + ++ NK D Sbjct: 69 KIRPLWRHYYTGTQGLIFVVDCADR---DRIDEARQELHRIINDREMRDAIILIFANKQD 125 Query: 129 LENRQVATKRAQAW-CYSKNNIPYF--ETSAKEAINVEQAFQTI 169 L + + + + ++ + A + + + Sbjct: 126 LPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWL 169 >6BBQ-A nrPDB Length = 520 Score = 101 bits (252), Expect = 2e-22, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 63/164 (38%), Gaps = 11/164 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +++++LG GKT+++ + + S T+G + T V + V +WD G + Sbjct: 360 MRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVET----VTYKNVKFNVWDVGGLD 414 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + + L +Y G + V D +D R E + R+ + ++ NK D Sbjct: 415 KIRPLWRHYYTGTQGLIFVVDCADR---DRIDEARQELHRIINDREMRDAIILIFANKQD 471 Query: 129 LENRQVATKRAQAW-CYSKNNIPYF--ETSAKEAINVEQAFQTI 169 L + + + + ++ + A + + + Sbjct: 472 LPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWL 515 >1MOZ-A nrPDB Length = 183 Score = 95.0 bits (235), Expect = 2e-20, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 63/171 (36%), Gaps = 11/171 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 L+++ILG G GKT+++ + + K TIG + T + + + + +WD GQ Sbjct: 19 LRILILGLDGAGKTTILYRLQIGEVVTT-KPTIGFNVET----LSYKNLKLNVWDLGGQT 73 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + +Y + V D T + + E + + ++ +V NK D Sbjct: 74 SIRPYWRCYYADTAAVIFVVDSTDK---DRMSTASKELHLMLQEEELQDAALLVFANKQD 130 Query: 129 LE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 + +K + +SA + + + + ++ Sbjct: 131 QPGALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVIKEE 181 >4ZI3-A nrPDB Length = 190 Score = 93.1 bits (230), Expect = 8e-20, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 11/181 (6%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 + S +++++LG GKT+L+ Q ++ S+ T G + + V + + Sbjct: 10 LKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISH-ITPTQGFNIKS----VQSQGFKLN 64 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 +WD GQ + + +++ D + V D F+ E P Sbjct: 65 VWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETG---QELTELLEEEKLSCVPV 121 Query: 121 VVLGNKIDLENRQVATKRAQAW---CYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177 ++ NK DL A++ A+ SA V+ + +N ++ Sbjct: 122 LIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAKK 181 Query: 178 T 178 Sbjct: 182 K 182 >2LKD-A nrPDB Length = 178 Score = 90.0 bits (222), Expect = 7e-19, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 69/178 (38%), Gaps = 25/178 (14%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 M R V V I+G GKT+L++ + K + Q I +V V+D+ +T Sbjct: 4 MVERPPV---VTIMGHVDHGKTTLLDAIRHSKVTEQEAGGITQHIGAYQVTVNDKKITF- 59 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVF---DVTAPNTFKTLDSWRDEFLIQASPRDPEN 117 DT G E F ++ + D +LV D P T + ++ + N Sbjct: 60 -LDTPGHEAFTTMRARGAQVTDIVILVVAADDGVMPQTVEAINHAK-----------AAN 107 Query: 118 FPFVVLGNKIDLEN---RQVATKRAQAWCYSK---NNIPYFETSAKEAINVEQAFQTI 169 P +V NK+D +V + + + + + + SAK ++ + I Sbjct: 108 VPIIVAINKMDKPEANPDRVMQELMEYNLVPEEWGGDTIFCKLSAKTKEGLDHLLEMI 165 >3BH6-A nrPDB Length = 164 Score = 89.2 bits (220), Expect = 1e-18, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 11/168 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +++++LG GKT+L+ Q ++ S+ T G + + V + + +WD G Sbjct: 5 VRILLLGLDNAGKTTLLKQLASEDISH-ITPTQGFNIKS----VQSQGFKLNVWDIGGLR 59 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + + +++ D + V D F+ E P ++ NK D Sbjct: 60 KIRPYWRSYFENTDILIYVIDSADRKRFEETG---QELTELLEEEKLSCVPVLIFANKQD 116 Query: 129 LENRQVATKRAQAW---CYSKNNIPYFETSAKEAINVEQAFQTIARNA 173 L A++ A+ SA V+ + +N Sbjct: 117 LLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNV 164 >6IAE-A nrPDB Length = 223 Score = 87.7 bits (216), Expect = 3e-18, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 68/194 (35%), Gaps = 22/194 (11%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVN--KKFSNQYKATIGADFLTKEVMVDD------ 54 S L+K+++LG S GK+++ N + +Y T L E+ +DD Sbjct: 4 SMSDDLVKILVLGPSKSGKSTVTNFLAGTRDTPTKEYHETNPLRVLEVEIALDDTRRSGR 63 Query: 55 -----RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQ 109 + +Q+WD G + Q+ A AD + VF+ + K L W F + Sbjct: 64 QAAGLKKAVVQLWDVGGSSKHQAGWPAIASNADGIIYVFNPEVKGSEKELLLWYKNFALN 123 Query: 110 ASPRDPENFPFV--------VLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEA-I 160 D +N + + + L V I ETS Sbjct: 124 QDELDDDNNFKMRVTDGHSLIFSHHSSLPEFAVGDNAIPPMPKQLQGIRALETSLDYQSD 183 Query: 161 NVEQAFQTIARNAL 174 N ++AF + + Sbjct: 184 NFKEAFDALVEQII 197 >1KSG-A nrPDB Length = 186 Score = 86.9 bits (214), Expect = 5e-18, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 8/129 (6%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 61 +K+ L++++LG GKT+++ ++ N + + T+G + T ++ R + I Sbjct: 12 MKQKERELRLLMLGLDNAGKTTILKKF-NGEDVDTISPTLGFNIKT----LEHRGFKLNI 66 Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121 WD GQ+ +S ++ D + V D + E + Sbjct: 67 WDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQR---ELQSLLVEERLAGATLL 123 Query: 122 VLGNKIDLE 130 + NK DL Sbjct: 124 IFANKQDLP 132 >5DE3-A nrPDB Length = 169 Score = 86.5 bits (213), Expect = 7e-18, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 60/167 (35%), Gaps = 11/167 (6%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 ++++LG GKT+++ + T G F K + D ++IWD GQ+ Sbjct: 2 RILVLGLDNAGKTTILKALSE-EDITTITPTQG--FNIKSLSRDG--FNLKIWDIGGQKS 56 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 + ++ D + V D L E P +V NK DL Sbjct: 57 IRPYWRNYFDQTDALIYVIDSADSK---RLSESEFELTELLQEEKMTGVPLLVFANKQDL 113 Query: 130 ENRQVATKRAQAW-CYSKNNIPY--FETSAKEAINVEQAFQTIARNA 173 A + A S + P+ SAK+ +++ + + + Sbjct: 114 VGALAADEIASTLDLTSIRDRPWQIQACSAKQGTGLKEGMEWMMKQV 160 >2X77-A nrPDB Length = 189 Score = 83.0 bits (204), Expect = 7e-17, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 61/172 (35%), Gaps = 13/172 (7%) Query: 9 LKVIILGDSGVGKTSLMNQY-VNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 ++V++LG GKTS++ + + + + + + + ++ ++WD GQ Sbjct: 23 IRVLMLGLDNAGKTSILYRLHLGDVVTTVPTVGVNLE------TLQYKNISFEVWDLGGQ 76 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 + ++ D + V D T + + E + ++ NK Sbjct: 77 TGVRPYWRCYFSDTDAVIYVVDSTDR---DRMGVAKHELYALLDEDELRKSLLLIFANKQ 133 Query: 128 DLENRQVATKRAQAWCYS---KNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 DL + + A+ S ++S+K + + + +Q Sbjct: 134 DLPDAASEAEIAEQLGVSSIMNRTWTIVKSSSKTGDGLVEGMDWLVERLREQ 185 >2H57-A nrPDB Length = 190 Score = 83.0 bits (204), Expect = 8e-17, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 63/177 (35%), Gaps = 9/177 (5%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYV-NKKFSNQYKATIGADFLTKEVMVDDRLVTM 59 + R + V+ LG GKT+++N+ + S TIG ++ Sbjct: 14 LVPRGSKEVHVLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIEK----FKSSSLSF 69 Query: 60 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119 ++D +GQ R+++L +Y+ + V D + D L + P Sbjct: 70 TVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKH-RRIP 128 Query: 120 FVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKE---AINVEQAFQTIARNA 173 + NK+DL + + K +Q C + A + +++ + Sbjct: 129 ILFFANKMDLRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVDWLQDQI 185 >4V0N-A nrPDB Length = 169 Score = 81.9 bits (201), Expect = 2e-16, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 66/169 (39%), Gaps = 11/169 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYV-NKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 + V+++G GKT+++ + + + + T+G V+ +T ++D +G Sbjct: 7 VNVLVVGLDNSGKTTIIERLKPRPRQAAEVAPTVGFTVD----EVEKGPLTFTVFDMSGA 62 Query: 68 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 R+++L +YR AD V V D + RDE + P + NK Sbjct: 63 GRYRTLWEQYYREADAVVFVVDSADK---LRMVVARDEMEHMLKHSNMRKVPILYFANKK 119 Query: 128 DLENRQVATKRAQAW-CYSKNNIPY--FETSAKEAINVEQAFQTIARNA 173 DL + AQA + P+ ++ V++ +A Sbjct: 120 DLPVAMPPVEIAQALGLDDIKDRPWQIVPSNGLTGEGVDKGIDWLAERL 168 >3GEH-A nrPDB Length = 462 Score = 78.0 bits (191), Expect = 2e-15, Method: Composition-based stats. Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 34/201 (16%) Query: 9 LKVIILGDSGVGKTSLMNQYVN-KKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG- 66 LKV I+G VGK+SL+N + + D + +++V + +Q+ DTAG Sbjct: 225 LKVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQLVVGG--IPVQVLDTAGI 282 Query: 67 ---QERFQSLGVAFYRG----ADCCVLVFDVTAPNTFKTLDSWR---DEFLIQASPRDPE 116 ++ + +GV R AD +L D W E Q R Sbjct: 283 RETSDQVEKIGVERSRQAANTADLVLLTID--------AATGWTTGDQEIYEQVKHR--- 331 Query: 117 NFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINV---EQAFQTIARNA 173 P +++ NKIDL +Q+ T + Y +N T+A + + E A I + Sbjct: 332 --PLILVMNKIDLVEKQLIT----SLEYPENITQIVHTAAAQKQGIDSLETAILEIVQTG 385 Query: 174 LKQETEVELYNEFPEPIKLDK 194 Q +++L + L + Sbjct: 386 KVQAADMDLAINQRQAAALTQ 406 >1M2O-B nrPDB Length = 190 Score = 75.7 bits (185), Expect = 1e-14, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 70/178 (39%), Gaps = 26/178 (14%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFS---NQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66 K++ LG GKT+L++ N + + + T ++E+ + + + +D G Sbjct: 25 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPT------SEELAIGN--IKFTTFDLGG 76 Query: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNK 126 + + L ++ + V + D P F R E + + ++ PFV+LGNK Sbjct: 77 HIQARRLWKDYFPEVNGIVFLVDAADPERFDEA---RVELDALFNIAELKDVPFVILGNK 133 Query: 127 IDLENRQVATKRAQAWCYSKNN-----------IPYFETSAKEAINVEQAFQTIARNA 173 ID N V+ ++ N + F S +AFQ +++ Sbjct: 134 IDAPN-AVSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWLSQYI 190 >6GNI-B nrPDB Length = 167 Score = 75.3 bits (184), Expect = 2e-14, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 70/176 (39%), Gaps = 26/176 (14%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFS---NQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66 K++ LG GKT+L++ N + + + T ++E+ + + + +D G Sbjct: 3 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPT------SEELAIGN--IKFTTFDLGG 54 Query: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNK 126 + + L ++ + V + D P F R E + + ++ PFV+LGNK Sbjct: 55 HIQARRLWKDYFPEVNGIVFLVDAADPERFDEA---RVELDALFNIAELKDVPFVILGNK 111 Query: 127 IDLENRQVATKRAQAWCYSKNN-----------IPYFETSAKEAINVEQAFQTIAR 171 ID N V+ ++ N + F S +AFQ +++ Sbjct: 112 IDAPN-AVSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWLSQ 166 >5KH0-A nrPDB Length = 396 Score = 74.6 bits (182), Expect = 3e-14, Method: Composition-based stats. Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 30/170 (17%) Query: 11 VIILGDSGVGKTSLMNQYVNKK---FSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 + I G VGK+S MN + ++ SN T F + E+ + + + DT G Sbjct: 11 IAITGRRNVGKSSFMNALIGQEVSIVSNVAGTTTDPVFKSMEL---SPVGPITLIDTPGL 67 Query: 68 ERFQSLG--------VAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119 + LG + YR ADC +L+ D N + + E P Sbjct: 68 DDVGELGIKRIKKAKKSLYR-ADCGILIVDDIPGNFEEQIIKLFKEL----------EIP 116 Query: 120 FVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169 + + NKID + + K Y K N+P + SA + I E+ +TI Sbjct: 117 YFIAINKIDTIDHENIEKE-----YKKYNVPILKVSALKKIGFEKIGKTI 161 >4BAS-A nrPDB Length = 199 Score = 73.0 bits (178), Expect = 7e-14, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 74/187 (39%), Gaps = 13/187 (6%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYK-ATIGADFLTKEVMVDDRLVTMQ 60 + K L+V++ G GKT+++NQ + S+++ AT+G + T + V Sbjct: 11 MGQSKTKLQVVMCGLDNSGKTTIINQVKPAQSSSKHITATVGYNVET----FEKGRVAFT 66 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD----PE 116 ++D G ++F+ L +Y D + V D + + S L R Sbjct: 67 VFDMGGAKKFRGLWETYYDNIDAVIFVVDSSDHLRLCVVKSEIQAMLKHEDIRRELPGGG 126 Query: 117 NFPFVVLGNKIDLENRQVATK--RAQAWCYSKNNIPY--FETSAKEAINVEQAFQTIARN 172 PF+ NK+D + A + + P+ F ++ + V + F + Sbjct: 127 RVPFLFFANKMDAAGAKTAAELVEILDLTTLMGDHPFVIFASNGLKGTGVHEGFSWLQET 186 Query: 173 ALKQETE 179 A +Q + Sbjct: 187 ASRQSGK 193 >5DI3-B nrPDB Length = 263 Score = 72.6 bits (177), Expect = 1e-13, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 74/207 (35%), Gaps = 28/207 (13%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERF 70 + +LG GKT+L+N + + T G + T +++ ++++D G + Sbjct: 7 IALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFNSTT----LNEGKYKIEVFDLGGGKNI 61 Query: 71 QSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLE 130 + + + V V D P F+ E L + + P + NK DL Sbjct: 62 RGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLEN---QFMRDKPICIFANKQDLP 118 Query: 131 N----RQVATKRAQAWCYSKNNIPYFETSAKE------AINVEQAFQTIA--------RN 172 +V A C + +N+ F +AK + + + R Sbjct: 119 TAAPAAEVVKGLGLATCRNSHNV--FPCTAKMPAGQDVDHRLRDGLKWLVGTVDREFGRL 176 Query: 173 ALKQETEVELYNEFPEPIKLDKNERAK 199 + +TE E + K ++ ER + Sbjct: 177 DPRVQTEAEEVRQEEARKKKEREERLR 203 >4M9Q-A nrPDB Length = 227 Score = 72.6 bits (177), Expect = 1e-13, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 74/207 (35%), Gaps = 28/207 (13%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERF 70 + +LG GKT+L+N + + T G + T +++ ++++D G + Sbjct: 7 IALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFNSTT----LNEGKYKIEVFDLGGGKNI 61 Query: 71 QSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLE 130 + + + V V D P F+ E L + + P + NK DL Sbjct: 62 RGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLEN---QFMRDKPICIFANKQDLP 118 Query: 131 N----RQVATKRAQAWCYSKNNIPYFETSAKE------AINVEQAFQTIA--------RN 172 +V A C + +N+ F +AK + + + R Sbjct: 119 TAAPAAEVVKGLGLATCRNSHNV--FPCTAKMPAGQDVDHRLRDGLKWLVGTVDREFGRL 176 Query: 173 ALKQETEVELYNEFPEPIKLDKNERAK 199 + +TE E + K ++ ER + Sbjct: 177 DPRVQTEAEEVRQEEARKKKEREERLR 203 >1G7S-A nrPDB Length = 594 Score = 72.6 bits (177), Expect = 1e-13, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 71/197 (36%), Gaps = 36/197 (18%) Query: 11 VIILGDSGVGKTSLMNQYVNK-----------------KFSNQYKATIGADFLTKEVMVD 53 V +LG GKT+L++ + I DFL K+ + Sbjct: 8 VSVLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATEIPMDVIEGICGDFL-KKFSIR 66 Query: 54 DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPR 113 + L + DT G E F +L AD +L+ D+ + ++ + + Sbjct: 67 ETLPGLFFIDTPGHEAFTTLRKRGGALADLAILIVDIN--------EGFKPQTQEALNIL 118 Query: 114 DPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 173 PFVV NKID R W + P+ ET +K+ I V+Q T Sbjct: 119 RMYRTPFVVAANKID---------RIHGWRVHEGR-PFMETFSKQDIQVQQKLDTKVYEL 168 Query: 174 LKQETEVELYNEFPEPI 190 + + E +E + + Sbjct: 169 VGKLHEEGFESERFDRV 185 >3T1O-A nrPDB Length = 198 Score = 72.6 bits (177), Expect = 1e-13, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 71/189 (37%), Gaps = 19/189 (10%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSN-----------QYKATIGADFLTKEV- 50 + +++ K++ G GKT+ + ++ K + + T+ DFL ++ Sbjct: 9 ANREINFKIVYYGPGLSGKTTNLK-WIYSKVPEGRKGEMVSLATEDERTLFFDFLPLDIG 67 Query: 51 MVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTA---PNTFKTLDSWRDEFL 107 V ++ GQ + + RG D V V D +++ + R+ Sbjct: 68 EVKGFKTRFHLYTVPGQVFYNASRKLILRGVDGIVFVADSAPNRLRANAESMRNMRENLA 127 Query: 108 IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQ 167 ++ P V+ NK DL + + + +A + P E A E V + + Sbjct: 128 EY--GLTLDDVPIVIQVNKRDLPD-ALPVEMVRAVVDPEGKFPVLEAVATEGKGVFETLK 184 Query: 168 TIARNALKQ 176 ++R L + Sbjct: 185 EVSRLVLAR 193 >2GAO-A nrPDB Length = 208 Score = 70.7 bits (172), Expect = 4e-13, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 68/180 (37%), Gaps = 25/180 (13%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K++ LG GKT+L++ + + Q+ T+ ++E+ + +T +D G E+ Sbjct: 37 KLVFLGLDNAGKTTLLHMLKDDR-LGQHVPTL--HPTSEELTIAG--MTFTTFDLGGHEQ 91 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 + + + + V + D + L + E + N P ++LGNKID Sbjct: 92 ARRVWKNYLPAINGIVFLVDCADHS---RLVESKVELNALMTDETISNVPILILGNKID- 147 Query: 130 ENRQVATKRAQAWCY-------------SKNNIPYFE---TSAKEAINVEQAFQTIARNA 173 ++ ++ + + N E S + + F+ +++ Sbjct: 148 RTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 207 >1F6B-A nrPDB Length = 198 Score = 69.6 bits (169), Expect = 1e-12, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 68/180 (37%), Gaps = 25/180 (13%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 K++ LG GKT+L++ + + Q+ T+ ++E+ + +T +D G + Sbjct: 27 KLVFLGLDNAGKTTLLHMLKDDR-LGQHVPTL--HPTSEELTIAG--MTFTTFDLGGHIQ 81 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 + + + + V + D + L ++E + N P ++LGNKID Sbjct: 82 ARRVWKNYLPAINGIVFLVDCADH---ERLLESKEELDSLMTDETIANVPILILGNKID- 137 Query: 130 ENRQVATKRAQAWCY-------------SKNNIPYFE---TSAKEAINVEQAFQTIARNA 173 ++ +R + + N E S + + F+ +A+ Sbjct: 138 RPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197 >4B44-A nrPDB Length = 363 Score = 68.8 bits (167), Expect = 2e-12, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 54/167 (32%), Gaps = 20/167 (11%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERF 70 V+I+G GKT+L++ + + + I V T+ DT G E F Sbjct: 76 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGA--FEVKTPQGTVVFIDTPGHEAF 133 Query: 71 QSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLE 130 ++ + AD V+V + + + NKIDL Sbjct: 134 TTIRQRGAKVADIAVIVIAADDG--------IMPQTEEAIAHAKAAGAKLIFAINKIDLP 185 Query: 131 NRQVATKRAQAWCYSKNNIP--------YFETSAKEAINVEQAFQTI 169 Q ++ + + +P SAK V+ + I Sbjct: 186 --QADPEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMI 230 >4KJZ-A nrPDB Length = 473 Score = 68.4 bits (166), Expect = 2e-12, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 54/167 (32%), Gaps = 20/167 (11%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERF 70 V+I+G GKT+L++ + + + I V T+ DT G E F Sbjct: 75 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGA--FEVKTPQGTVVFIDTPGHEAF 132 Query: 71 QSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLE 130 ++ + AD V+V + + + NKIDL Sbjct: 133 TTIRQRGAKVADIAVIVIAADDG--------IMPQTEEAIAHAKAAGAKLIFAINKIDLP 184 Query: 131 NRQVATKRAQAWCYSKNNIP--------YFETSAKEAINVEQAFQTI 169 Q ++ + + +P SAK V+ + I Sbjct: 185 --QADPEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMI 229 >3J4J-A nrPDB Length = 569 Score = 68.0 bits (165), Expect = 3e-12, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 54/167 (32%), Gaps = 20/167 (11%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERF 70 V+I+G GKT+L++ + + + I V T+ DT G E F Sbjct: 76 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGA--FEVKTPQGTVVFIDTPGHEAF 133 Query: 71 QSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLE 130 ++ + AD V+V + + + NKIDL Sbjct: 134 TTIRQRGAKVADIAVIVIAADDG--------IMPQTEEAIAHAKAAGAKLIFAINKIDLP 185 Query: 131 NRQVATKRAQAWCYSKNNIP--------YFETSAKEAINVEQAFQTI 169 Q ++ + + +P SAK V+ + I Sbjct: 186 --QADPEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMI 230 >4C0K-A nrPDB Length = 423 Score = 67.6 bits (164), Expect = 3e-12, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 59/153 (38%), Gaps = 27/153 (17%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 + K ++G G GKT + ++ IG +F T V + ++Q++ GQ Sbjct: 246 VYKCHVIGPKGSGKTGMCRGFL----VEDMHKLIGKEFKTNVVNCIN---SVQVY---GQ 295 Query: 68 ERFQSLGVAFYRGA-----------DCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPE 116 E+ L R A D LV+D + P +F+ + ++ + Sbjct: 296 EKHLILRDIDVRHALDPLQPQEVNCDVACLVYDSSNPRSFEYVARIYIKYYAE------S 349 Query: 117 NFPFVVLGNKIDLENRQVATKRAQAWCYSKNNI 149 P +++G K D++ R+ + K + Sbjct: 350 KIPVMIVGTKCDMDERRQDYLMQPSEFCDKYKL 382 >2GJ9-A nrPDB Length = 172 Score = 67.6 bits (164), Expect = 3e-12, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 63/183 (34%), Gaps = 30/183 (16%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKK--FSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66 +KV+I G GK+SL+N ++ T D L + + +D + I DTAG Sbjct: 5 MKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTT-RDVLREHIHIDGMP--LHIIDTAG 61 Query: 67 Q-------ERFQSLGV-AFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENF 118 ER AD + + D T + + W + R P Sbjct: 62 LREASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFI-----ARLPAKL 116 Query: 119 PFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQET 178 P V+ NK D+ + N SA+ V+ + RN LKQ Sbjct: 117 PITVVRNKADITGETLGMSE-------VNGHALIRLSARTGEGVD-----VLRNHLKQSM 164 Query: 179 EVE 181 + Sbjct: 165 GFD 167 >2E87-A nrPDB Length = 357 Score = 67.2 bits (163), Expect = 4e-12, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 68/188 (36%), Gaps = 28/188 (14%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV---DDRLVTMQIWDTAGQ 67 V+I G VGK++L+ K F T+ + V +D QI DT G Sbjct: 170 VVIAGHPNVGKSTLLKALTTAKPEIASYP-----FTTRGINVGQFEDGYFRYQIIDTPGL 224 Query: 68 -----------ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDP- 115 E+ L + + + + +FD + F ++ + Sbjct: 225 LDRPISERNEIEKQAILALRYL--GNLIIYIFDPSEHCGF----PLEEQIHLFEEVHGEF 278 Query: 116 ENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 ++ PF+V+ NKID+ + + + + + + + SA + ++ + I + Sbjct: 279 KDLPFLVVINKIDVADEENIKRLEK--FVKEKGLNPIKISALKGTGIDLVKEEIIKTLRP 336 Query: 176 QETEVELY 183 +V Sbjct: 337 LAEKVARE 344 >6GB2-BC nrPDB Length = 657 Score = 66.9 bits (162), Expect = 6e-12, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 66/200 (33%), Gaps = 28/200 (14%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 +T R V V I+G GKT+L++++ + + I V + + Sbjct: 106 LTPRSPV---VTIMGHVDHGKTTLLDKFRKTQVAAVETGGITQHIGAFLVSLPSGE-KIT 161 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVF---DVTAPNTFKTLDSWRDEFLIQASPRDPEN 117 DT G F ++ + D VLV D T +++ +D Sbjct: 162 FLDTPGHAAFSAMRARGAQVTDIVVLVVAADDGVMKQTVESIQHAKD-----------AQ 210 Query: 118 FPFVVLGNKIDLENRQVATKRAQAWCYSK------NNIPYFETSAKEAINVEQAFQTIAR 171 P ++ NK D + + Y ++ SA N+ +A Sbjct: 211 VPIILAVNKCDKAEADPEKVKKELLAYDVVCEDYGGDVQAVPVSALTGDNL----MALAE 266 Query: 172 NALKQETEVELYNEFPEPIK 191 + +EL + P++ Sbjct: 267 ATVALAEMLELKADPNGPVE 286 >5YT0-A nrPDB Length = 364 Score = 65.7 bits (159), Expect = 1e-11, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 74/200 (37%), Gaps = 40/200 (20%) Query: 11 VIILGDSGVGKTSLMNQY----VNKKFSNQYKATIGADF------------LTKEVMVDD 54 V++LG GKT+L+++ V K + IGA L K + V Sbjct: 19 VVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIAEPLKKVIPVKL 78 Query: 55 RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVT---APNTFKTLDSWRDEFLIQAS 111 + + DT G E F +L AD +LV D+ P T++ L+ ++ Sbjct: 79 VIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEALELLKE------- 131 Query: 112 PRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 PF++ NKID R W + P+ ET ++ V + + Sbjct: 132 ----RRVPFLIAANKID---------RIPGW-KPNPDAPFIETIRRQDPKVREILEQRVY 177 Query: 172 NALKQETEVELYNEFPEPIK 191 + + E L E IK Sbjct: 178 EIVGKMYEAGLPAELFTRIK 197 >3IZY-P nrPDB Length = 537 Score = 65.7 bits (159), Expect = 2e-11, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 51/160 (31%), Gaps = 21/160 (13%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERF 70 V I+G GKT+L+++ + + I V + + DT G F Sbjct: 7 VTIMGHVDHGKTTLLDKLRKTQVAAMEAGGITQHIGAFLVSLPSGE-KITFLDTPGHAAF 65 Query: 71 QSLGVAFYRGADCCVLVF---DVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 ++ + D +LV D T +++ +D + P V+ NK Sbjct: 66 SAMRARGTQVTDIVILVVAADDGVMKQTVESIQHAKD-----------AHVPIVLAINKC 114 Query: 128 DLENRQVATKRAQAWCYSK------NNIPYFETSAKEAIN 161 D + + Y ++ SA N Sbjct: 115 DKAEADPEKVKKELLAYDVVCEDYGGDVQAVHVSALTGEN 154 >5FG3-A nrPDB Length = 623 Score = 64.9 bits (157), Expect = 2e-11, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 74/200 (37%), Gaps = 40/200 (20%) Query: 11 VIILGDSGVGKTSLMNQY----VNKKFSNQYKATIGADF------------LTKEVMVDD 54 V++LG GKT+L+++ V K + IGA L K + V Sbjct: 19 VVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIAEPLKKVIPVKL 78 Query: 55 RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVT---APNTFKTLDSWRDEFLIQAS 111 + + DT G E F +L AD +LV D+ P T++ L+ ++ Sbjct: 79 VIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEALELLKE------- 131 Query: 112 PRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 PF++ NKID R W + P+ ET ++ V + + Sbjct: 132 ----RRVPFLIAANKID---------RIPGW-KPNPDAPFIETIRRQDPKVREILEQRVY 177 Query: 172 NALKQETEVELYNEFPEPIK 191 + + E L E IK Sbjct: 178 EIVGKMYEAGLPAELFTRIK 197 >5LAD-A nrPDB Length = 404 Score = 64.9 bits (157), Expect = 2e-11, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 69/189 (36%), Gaps = 26/189 (13%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFS--NQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +++ G VGK+S MN V + S ++Y T + VT+ DT G + Sbjct: 12 IVVAGRRNVGKSSFMNALVGQNVSIVSEYAGTTTDPVYKSMELYPVGPVTL--VDTPGLD 69 Query: 69 RFQSL--------GVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 L FYR ADC +LV D + + E PF Sbjct: 70 DVGELGRLRVEKARRVFYR-ADCGILVTDSEPTPYEDDVVNLFKEM----------EIPF 118 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180 VV+ NKID+ + + + S+ SA + + +TI+ L + E+ Sbjct: 119 VVVVNKIDVLGEK--AEELKGLYESRYEAKVLLVSALQKKGFDDIGKTIS-EILPGDEEI 175 Query: 181 ELYNEFPEP 189 + + Sbjct: 176 PYLGDLIDG 184 >1WF3-A nrPDB Length = 301 Score = 64.5 bits (156), Expect = 3e-11, Method: Composition-based stats. Identities = 47/229 (20%), Positives = 81/229 (35%), Gaps = 56/229 (24%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG---- 66 V I+G VGK++L+N + K + + ++ + R + DT G Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRR-QIVFVDTPGLHKP 68 Query: 67 ---------QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPEN 117 QE +++L + V V D+ P T + DE + +A Sbjct: 69 MDALGEFMDQEVYEALAD-----VNAVVWVVDLRHPPTPE------DELVARALKPLVGK 117 Query: 118 FPFVVLGNKID--------------------------LENRQVATKRAQAWCYSKNNIPY 151 P +++GNK+D L+ RQVA +A + Sbjct: 118 VPILLVGNKLDAAKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLALMPEGPFF 177 Query: 152 F-ETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDKNERAK 199 + E AK +Q F L++E L++E P + E A+ Sbjct: 178 YPEDYAKS----DQTFGEWVAEILREEAMKRLWHEVPYAVATKVEEVAE 222 >5YMX-A nrPDB Length = 203 Score = 64.2 bits (155), Expect = 4e-11, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 69/190 (36%), Gaps = 26/190 (13%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKK-----------FSNQYKATIGADFLTKEV- 50 S +++ K++ G GKT+ + QY+ K S + T+ DFL + Sbjct: 7 SSREINCKIVYYGPGLCGKTTNL-QYIYNKTAAETKGKLISLSTETDRTLFFDFLPLSLG 65 Query: 51 MVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDV------TAPNTFKTLDSWRD 104 + ++ GQ + + +G D V V D + + L Sbjct: 66 EIRGFKTRFHLYTVPGQVFYDASRKLILKGVDGVVFVADSQIERMEANMESLENLRINLA 125 Query: 105 EFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQ 164 E D P+V+ NK DL N V + + + NIP ++ A + V Sbjct: 126 E-----QGYDLNKIPYVIQYNKRDLPN-AVTVEEMRK-ALNHRNIPEYQAVAPTGVGVFD 178 Query: 165 AFQTIARNAL 174 + +A+ L Sbjct: 179 TLKAVAKLVL 188 >3J8G-X nrPDB Length = 490 Score = 63.8 bits (154), Expect = 6e-11, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 69/190 (36%), Gaps = 26/190 (13%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYK-ATIGADFLTKEVMVDDRLVTMQIWD 63 + + +K+ I+G VGK++L N+ + ++ Y D + + D R + D Sbjct: 199 QSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVL--ID 256 Query: 64 TAG----------QERFQSLGV-AFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASP 112 TAG E+F + A+ +LV D + + L S L Sbjct: 257 TAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDL-SLLGFILNSGRS 315 Query: 113 RDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFE---TSAKEAINVEQAFQTI 169 V++ NK D +++V + + + I + SA V F++ Sbjct: 316 -------LVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSGVGNLFES- 367 Query: 170 ARNALKQETE 179 R A T Sbjct: 368 VREAYDSSTR 377 Score = 41.1 bits (95), Expect = 4e-04, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 19/127 (14%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYK-ATIGADFLTKEVMVDDRLVTMQIWDTAGQE- 68 V ++G VGK++L N+ + + + D ++ R DT G + Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGRE--FICIDTGGIDG 62 Query: 69 -------RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121 R + AD + + D A L + R+ P Sbjct: 63 TEDGVETRMAEQSLLAIEEADVVLFMVDARAG-----LMPADEAIAKHLRSREK---PTF 114 Query: 122 VLGNKID 128 ++ NK D Sbjct: 115 LVANKTD 121 >5IMR-C nrPDB Length = 610 Score = 62.2 bits (150), Expect = 2e-10, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 58/182 (31%), Gaps = 31/182 (17%) Query: 13 ILGDSGVGKTSLMNQYV--NKKFSNQYKATIGADFLT----KEVMV------------DD 54 I+ GK++L ++ + S++ D L + + + D Sbjct: 14 IIAHVDHGKSTLADRILELTHAVSDREMREQFLDSLELERERGITIKASAVRVTYRAKDG 73 Query: 55 RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD 114 + DT G F + +LV D + +TL + A Sbjct: 74 EEYVFHLIDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFY-----MALEHG 128 Query: 115 PENFPFVVLGNKIDLENRQ---VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 P + NKIDL N + VA + + + + S K VE+ + I + Sbjct: 129 HVIIPVI---NKIDLPNARPLEVALEVEEVLGLPADEAIF--ASGKTGEGVEEILEAIVQ 183 Query: 172 NA 173 Sbjct: 184 RI 185 >5J8B-z nrPDB Length = 679 Score = 62.2 bits (150), Expect = 2e-10, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 58/182 (31%), Gaps = 31/182 (17%) Query: 13 ILGDSGVGKTSLMNQYV--NKKFSNQYKATIGADFLT----KEVMV------------DD 54 I+ GK++L ++ + S++ D L + + + D Sbjct: 83 IIAHVDHGKSTLADRILELTHAVSDREMREQFLDSLELERERGITIKASAVRVTYRAKDG 142 Query: 55 RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD 114 + DT G F + +LV D + +TL + A Sbjct: 143 EEYVFHLIDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFY-----MALEHG 197 Query: 115 PENFPFVVLGNKIDLENRQ---VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 P + NKIDL N + VA + + + + S K VE+ + I + Sbjct: 198 HVIIPVI---NKIDLPNARPLEVALEVEEVLGLPADEAIF--ASGKTGEGVEEILEAIVQ 252 Query: 172 NA 173 Sbjct: 253 RI 254 >6GDG-D nrPDB Length = 248 Score = 61.9 bits (149), Expect = 2e-10, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 6/130 (4%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDT 64 + ++++LG GK++++ Q + F TK VD V ++D Sbjct: 32 YRATHRLLLLGADNSGKSTIVKQMRILHGGSGGSGGTSGIFETK-FQVD--KVNFHMFDV 88 Query: 65 AGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLG 124 GQ + + + + V D + N + + R ++ Sbjct: 89 GGQRDERRKWIQCFNDVTAIIFVVDSSDYNRLQEALNLFKSIWNN---RWLRTISVILFL 145 Query: 125 NKIDLENRQV 134 NK DL +V Sbjct: 146 NKQDLLAEKV 155 >1ZO1-I nrPDB Length = 501 Score = 61.9 bits (149), Expect = 2e-10, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 57/168 (33%), Gaps = 22/168 (13%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERF 70 V I+G GKTSL+ + K ++ I V ++ ++T DT G F Sbjct: 7 VTIMGHVDHGKTSLLEYIRSTKVASGEAGGITQHIGAYHVETENGMITF--LDTPGHAAF 64 Query: 71 QSLGVAFYRGADCCVLVF---DVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 S+ + D VLV D P T + + + + NKI Sbjct: 65 TSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAV-----------NKI 113 Query: 128 DLEN---RQVATKRAQAWCYSK---NNIPYFETSAKEAINVEQAFQTI 169 D +V + +Q + + SAK +++ I Sbjct: 114 DKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAI 161 >3JCN-b nrPDB Length = 890 Score = 61.1 bits (147), Expect = 4e-10, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 58/168 (34%), Gaps = 22/168 (13%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERF 70 V I+G GKTSL++ + K ++ I V ++ ++T DT G F Sbjct: 394 VTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITF--LDTPGHAAF 451 Query: 71 QSLGVAFYRGADCCVLVF---DVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127 S+ + D VLV D P T + + + + NKI Sbjct: 452 TSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAV-----------NKI 500 Query: 128 DLEN---RQVATKRAQAWCYSK---NNIPYFETSAKEAINVEQAFQTI 169 D +V + +Q + + SAK +++ I Sbjct: 501 DKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAI 548 >3CB4-D nrPDB Length = 599 Score = 60.7 bits (146), Expect = 4e-10, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 55/181 (30%), Gaps = 29/181 (16%) Query: 13 ILGDSGVGKTSL---MNQYVNKKFSNQYKATI----------GADFLTKEVMVD-----D 54 I+ GK++L + Q + +A + G + V +D Sbjct: 9 IIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDYKASDG 68 Query: 55 RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD 114 + DT G F + +LV D A + + L Sbjct: 69 ETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVD--AGQGVEA------QTLANCYTAM 120 Query: 115 PENFPFVVLGNKIDLE--NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN 172 + V + NKIDL + + + + + SAK + V+ + + R+ Sbjct: 121 EMDLEVVPVLNKIDLPAADPERVAEEIEDI-VGIDATDAVRCSAKTGVGVQDVLERLVRD 179 Query: 173 A 173 Sbjct: 180 I 180 >1MKY-A nrPDB Length = 439 Score = 58.8 bits (141), Expect = 1e-09, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 22/192 (11%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKAT-IGADFLTKEVMVDDRLVTMQIWDTAG--- 66 V+I+G VGK++L N+ V KK + + D + V + + DT G Sbjct: 4 VLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKL--VDTCGVFD 61 Query: 67 ------QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 ++ + + + R AD + V D T E A Sbjct: 62 NPQDIISQKMKEVTLNMIREADLVLFVVDGKRGIT--------KEDESLADFLRKSTVDT 113 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180 +++ NK EN + + + YS SA+ IN++ +TI + ++ ++ Sbjct: 114 ILVANKA--ENLREFEREVKPELYSLGFGEPIPVSAEHNINLDTMLETIIKKLEEKGLDL 171 Query: 181 ELYNEFPEPIKL 192 E E + IK+ Sbjct: 172 ESKPEITDAIKV 183 Score = 54.9 bits (131), Expect = 3e-08, Method: Composition-based stats. Identities = 42/179 (23%), Positives = 63/179 (35%), Gaps = 28/179 (15%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQY-KATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 +KV I+G VGK++L N +NK+ + D + EV +D R DTAG Sbjct: 181 IKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVF--VDTAGL 238 Query: 68 ERFQSLGVA------------FYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDP 115 R + AD V+V D T T + A + Sbjct: 239 RRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQD--------QRMAGLMER 290 Query: 116 ENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNI----PYFETSAKEAINVEQAFQTI 169 VV+ NK DL +R+ K P TSA + N+++ + Sbjct: 291 RGRASVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDRMIDAM 349 >6CES-A nrPDB Length = 313 Score = 58.8 bits (141), Expect = 2e-09, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 63/160 (39%), Gaps = 19/160 (11%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYK---ATIGADFLTKEVMVDDRLVTMQIWDTAG 66 KV+++G SG GKTS+ + + + ATI D V LV + +WD G Sbjct: 9 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATI--DVEHSHVRFLGNLV-LNLWDCGG 65 Query: 67 QE-----RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121 Q+ F S +R + + VFDV + + + L P+ F Sbjct: 66 QDTFMENYFTSQRDNIFRNVEVLIYVFDVESRE-LEKDMHYYQSCLEAILQNSPDAKIFC 124 Query: 122 VLGNKIDL---ENRQVATKRAQAWCYSKNN---IPYFETS 155 ++ +K+DL + R + K + + F TS Sbjct: 125 LV-HKMDLVQEDQRDLIFKEREEDLRRLSRPLECACFRTS 163 >3IEU-A nrPDB Length = 301 Score = 58.4 bits (140), Expect = 2e-09, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 72/202 (35%), Gaps = 26/202 (12%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ--E 68 + I+G VGK++L+N+ + +K S + + + + + DT G E Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYV-DTPGLHME 69 Query: 69 RFQSL-------GVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121 +++ + + + V + T W + + + P + Sbjct: 70 EKRAINRLMNKAASSSIGDVELVIFVVEGT---------RWTPDDEMVLNKLREGKAPVI 120 Query: 122 VLGNKIDLENRQVATKRA-QAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180 + NK+D + Q N + SA+ +NV+ I R L + T Sbjct: 121 LAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTI-AAIVRKHLPEATHH 179 Query: 181 ELYNEFPEPIKLDKNERAKASA 202 FPE D+++R AS Sbjct: 180 -----FPEDYITDRSQRFMASE 196 >2YWH-A nrPDB Length = 600 Score = 58.4 bits (140), Expect = 2e-09, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 60/182 (32%), Gaps = 29/182 (15%) Query: 12 IILGDSGVGKTSLMNQYV--NKKFSNQYKATIGADFL----TKEVMV------------D 53 I+ GK++L ++ + S + K D L + + V D Sbjct: 10 CIIAHVDHGKSTLADRLLEYTGAISEREKREQLLDTLDVERERGITVKMQAVRMFYKAKD 69 Query: 54 DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPR 113 + + DT G F + +L+ D + +T+ ++ Sbjct: 70 GNTYKLHLIDTPGHVDFSYEVSRALAACEGALLLIDASQGIEAQTVANFWKAV------- 122 Query: 114 DPENFPFVVLGNKIDLENRQV--ATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 ++ + + NKIDL + V K+ + SAKE I +E+ + I Sbjct: 123 -EQDLVIIPVINKIDLPSADVDRVKKQIEEVLGLDPEEAIL-ASAKEGIGIEEILEAIVN 180 Query: 172 NA 173 Sbjct: 181 RI 182 >1XZP-A nrPDB Length = 482 Score = 57.6 bits (138), Expect = 4e-09, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 71/174 (40%), Gaps = 25/174 (14%) Query: 9 LKVIILGDSGVGKTSLMNQYV-NKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG- 66 L+++I+G VGK++L+N+ + + D +++E+++ + +I DTAG Sbjct: 244 LRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRG--ILFRIVDTAGV 301 Query: 67 -------QERFQSLGVAF-YRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENF 118 ER AD + V D ++P + + +N Sbjct: 302 RSETNDLVERLGIERTLQEIEKADIVLFVLDASSPLDEED----------RKILERIKNK 351 Query: 119 PFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN 172 ++V+ NK+D+ + + ++ + SA + +E+ ++I R Sbjct: 352 RYLVVINKVDVVEKINEEEIKNKLGTDRHMVK---ISALKGEGLEKLEESIYRE 402 >2DYK-A nrPDB Length = 161 Score = 57.6 bits (138), Expect = 4e-09, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 63/177 (35%), Gaps = 36/177 (20%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYK-ATIGADFLTKEVMVDDRLVTMQIWDTAG 66 + KV+I+G VGK+SL N+ + K+ + + D V D + DT G Sbjct: 1 MHKVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETD--RGRFLLVDTGG 58 Query: 67 -----------QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDP 115 QE+ D V++F V D E+L + Sbjct: 59 LWSGDKWEKKIQEKVDRALE------DAEVVLFAVDGRAELTQADYEVAEYLRRKGK--- 109 Query: 116 ENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPY---FETSAKEAINVEQAFQTI 169 P +++ K+D ++ + + + TS++ A +E+ + I Sbjct: 110 ---PVILVATKVDDPKHEL-------YLGPLYGLGFGDPIPTSSEHARGLEELLEAI 156 >4TN1-B nrPDB Length = 345 Score = 57.2 bits (137), Expect = 5e-09, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 59/173 (34%), Gaps = 34/173 (19%) Query: 11 VIILGDSGVGKTSLMNQY------------VNKKFSNQYKATIGADFLTKEVMVDDR--- 55 ILG GKT L+++ + ++ Y T V D + Sbjct: 13 CCILGHVRTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 56 -LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD 114 + + I DT G E F +L + +LV D+ + + + Sbjct: 73 KVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDI--------MHGLEPQTIESLRLLR 124 Query: 115 PENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQ 167 PFVV NKID R W +NN + E+ A + V+ F+ Sbjct: 125 ERKTPFVVALNKID---------RLYGWKKIENN-GFRESFALQNKAVQNEFR 167 >4NCL-A nrPDB Length = 457 Score = 57.2 bits (137), Expect = 5e-09, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 59/173 (34%), Gaps = 34/173 (19%) Query: 11 VIILGDSGVGKTSLMNQY------------VNKKFSNQYKATIGADFLTKEVMVDDR--- 55 ILG GKT L+++ + ++ Y T V D + Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 56 -LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD 114 + + I DT G E F +L + +LV D+ + + + Sbjct: 73 KVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDI--------MHGLEPQTIESLRLLR 124 Query: 115 PENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQ 167 PFVV NKID R W +NN + E+ A + V+ F+ Sbjct: 125 ERKTPFVVALNKID---------RLYGWKKIENN-GFRESFALQNKAVQNEFR 167 >5DN8-A nrPDB Length = 446 Score = 56.8 bits (136), Expect = 6e-09, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 64/187 (34%), Gaps = 28/187 (14%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYK-ATIGADFLTKEVMVDDRLVTMQIWDTAG- 66 +K+ ++G VGK++L+N+ + ++ Y D + +D T+ DTAG Sbjct: 179 IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTL--IDTAGI 236 Query: 67 ------Q---ERFQSLGV-AFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPE 116 Q E+F + AD + + D T + L + Sbjct: 237 RRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDL--------RLLNRIVEA 288 Query: 117 NFPFVVLGNKID----LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN 172 ++ NK D E V + + YF SA V + F+ + Sbjct: 289 GVSLIIAVNKWDGLNIEERDNVRNAIDRRMPFVDFARRYF-ISALHGTGVGKLFR-AIQE 346 Query: 173 ALKQETE 179 + + + Sbjct: 347 SYQSIQQ 353 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 52/173 (30%), Gaps = 24/173 (13%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYK-ATIGADFLTKEVMVDDRLVTMQIWDTAGQ-- 67 + I+G VGK++L N + + + D E +D + + + DT G Sbjct: 8 IAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQR--LLLVDTGGLVD 65 Query: 68 -------ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 ++ +DC + + D A D E L + + Sbjct: 66 TENKEVAPLAETQVEQAIDESDCILFLVD--AKAGLVPADEIIAERLRKKGKK------I 117 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 173 + NK D V + PY +A V+ + N Sbjct: 118 FLAVNKADRARAAVVQSD---FYKLGFGEPYV-IAAASGRGVKDLMTQVLENL 166 >4N3G-A nrPDB Length = 603 Score = 56.8 bits (136), Expect = 6e-09, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 59/173 (34%), Gaps = 34/173 (19%) Query: 11 VIILGDSGVGKTSLMNQY------------VNKKFSNQYKATIGADFLTKEVMVDDR--- 55 ILG GKT L+++ + ++ Y T V D + Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 56 -LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD 114 + + I DT G E F +L + +LV D+ + + + Sbjct: 73 KVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDI--------MHGLEPQTIESLRLLR 124 Query: 115 PENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQ 167 PFVV NKID R W +NN + E+ A + V+ F+ Sbjct: 125 ERKTPFVVALNKID---------RLYGWKKIENN-GFRESFALQNKAVQNEFR 167 >4ZU9-A nrPDB Length = 582 Score = 56.1 bits (134), Expect = 1e-08, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 67/182 (36%), Gaps = 13/182 (7%) Query: 15 GDSGVGKTSLMNQYVN---KKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQ 71 G GKT+L+ + + K + D + D ++I D G ERF Sbjct: 10 GHVDHGKTTLIKTLTGIDTDRLPEEKKRGLSIDIGFAYIDFPDINTRLEIIDVPGHERFI 69 Query: 72 SLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLEN 131 +A A +LV D +T++ R + S + +K+D E Sbjct: 70 KNAIAGICSASGLILVVDPNEGIMPQTIEHLR----VAKSFGIKHGIAVLTKMDKVDEEL 125 Query: 132 RQVATKRAQAWC-YSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPI 190 +A + A+ + N+ + SA +E +N++K+ E +P+ Sbjct: 126 AHIAEEELIAFLEKEEMNMEIVKVSAVTGQGIEDL-----KNSIKKLLESINNLNKHKPL 180 Query: 191 KL 192 ++ Sbjct: 181 RI 182 >2CXX-A nrPDB Length = 190 Score = 55.7 bits (133), Expect = 1e-08, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 69/193 (35%), Gaps = 32/193 (16%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG---- 66 +I G S VGK++L+ + KK + + K + ++ + I D G Sbjct: 4 IIFAGRSNVGKSTLIYRLTGKKVRRGKRPGV----TRKIIEIEWKNHK--IIDMPGFGFM 57 Query: 67 -------QERFQSLGVAFY----RGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDP 115 QER + V F + D VLV D + + W I Sbjct: 58 MGLPKEVQERIKDEIVHFIEDNAKNIDVAVLVVD--GKAAPEIIKRWEKRGEIPIDVEFY 115 Query: 116 E-----NFPFVVLGNKIDLEN--RQVATKRAQAWCYSKNNIP--YFETSAKEAINVEQAF 166 + + P +V NK+D ++V A+ + + I + SAK N+E+ Sbjct: 116 QFLRELDIPTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIDKVFIPISAKFGDNIERLK 175 Query: 167 QTIARNALKQETE 179 I +++ Sbjct: 176 NRIFEVIRERQGR 188 >3R9W-A nrPDB Length = 307 Score = 54.5 bits (130), Expect = 3e-08, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 68/197 (34%), Gaps = 25/197 (12%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI--WDTAGQ- 67 V I+G VGK++L+N + K S G + + V + QI DT G Sbjct: 12 VAIVGKPNVGKSTLLNNLLGTKVS-IISPKAG-TTRMRVLGVKNIPNEAQIIFLDTPGIY 69 Query: 68 ---------ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRD-EFLIQASPRDPEN 117 + AD + + D T + WR + I + P N Sbjct: 70 EPKKSDVLGHSMVEIAKQSLEEADVILFMIDAT--------EGWRPRDEEIYQNFIKPLN 121 Query: 118 FPFVVLGNKIDL--ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175 P +V+ NKID + V + SA + N+++ +TI + + Sbjct: 122 KPVIVVINKIDKIGPAKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPE 181 Query: 176 QETEVELYNEFPEPIKL 192 E P++L Sbjct: 182 GEPLFPEDMITDLPLRL 198 >6G79-A nrPDB Length = 225 Score = 54.1 bits (129), Expect = 4e-08, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 62/193 (32%), Gaps = 31/193 (16%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 +K+++LG GK++++ Q K + G E + + +++D GQ Sbjct: 31 VKLLLLGADNSGKSTIVKQM---KIIHGGSGGSGGTTGIVETHFTFKNLHFRLFDVGGQR 87 Query: 69 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 + + + + D++ + + F + + + ++ NK D Sbjct: 88 SERKKWIHCFEDVTAIIFCVDLSD---YNRMHESLMLFDSICNNKFFIDTSIILFLNKKD 144 Query: 129 LENRQVATKR--------------------AQAWCYSKNNIPYFE-----TSAKEAINVE 163 L ++ QA SKN P E T A + N + Sbjct: 145 LFGEKIKKSPLTICFPEYTGPNTYEDAAAYIQAQFESKNRSPNKEIYCHMTCATDTNNAQ 204 Query: 164 QAFQTIARNALKQ 176 F + + Sbjct: 205 VIFDAVTDIIIAN 217 >4V7F-o nrPDB Length = 647 Score = 54.1 bits (129), Expect = 4e-08, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 63/193 (32%), Gaps = 27/193 (13%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV---DDRLVTMQIWDTAG- 66 ++I G VGK+S + Q A F TK + V D + + Q DT G Sbjct: 170 LLICGYPNVGKSSFLRCITKSDVDVQPYA-----FTTKSLYVGHFDYKYLRFQAIDTPGI 224 Query: 67 ----QERFQSLG-VAFYRGAD---CCVLVFDVTAPNTF--KTLDSWRDEFLIQASPRDPE 116 E ++ + Y A C + D++ F + + + Sbjct: 225 LDRPTEEMNNIEMQSIYAIAHLRSCVLYFMDLSEQCGFTIEAQVKLFHSIKPLFANKS-- 282 Query: 117 NFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFET---SAKEAINVEQAFQTIARNA 173 +V+ NK D+ + + S +P E S + NV + Sbjct: 283 ---VMVVINKTDIIRPEDLDEERAQLLESVKEVPGVEIMTSSCQLEENVMEVRNKACEKL 339 Query: 174 LKQETEVELYNEF 186 L E +L ++ Sbjct: 340 LASRIENKLKSQS 352 >4V8Y-CP nrPDB Length = 339 Score = 53.8 bits (128), Expect = 5e-08, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 69/204 (33%), Gaps = 54/204 (26%) Query: 11 VIILGDSGVGKTSLMNQY----VNKKFSNQYKATIGADFLTKEVMVDDRLVT-------- 58 ILG GKT L+++ V + IGA + + + V Sbjct: 8 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67 Query: 59 ----MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVT---APNTFKTLDSWRDEFLIQAS 111 + + DT G E F +L + +LV D+ T +++ RD Sbjct: 68 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRD------- 120 Query: 112 PRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIP---YFETSAKEAINVEQAFQ- 167 PFVV NKID Y IP + ++ AK++ V++ FQ Sbjct: 121 ----RKAPFVVALNKID-------------RLYDWKAIPNNSFRDSFAKQSRAVQEEFQS 163 Query: 168 -------TIARNALKQETEVELYN 184 +A L E + N Sbjct: 164 RYSKIQLELAEQGLNSELYFQNKN 187 >3A1W-A nrPDB Length = 168 Score = 53.8 bits (128), Expect = 5e-08, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 56/177 (31%), Gaps = 21/177 (11%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG- 66 ++KV + G VGKTSL N K + + T+ + D G Sbjct: 5 MVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKG--YTINLIDLPGT 62 Query: 67 -QERFQSLGVAFYR------GADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119 + S+ R AD +LV D P + E L Sbjct: 63 YSLGYSSIDEKIARDYLLKGDADLVILVADSVNP---EQSLYLLLEILEMEKK------- 112 Query: 120 FVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 ++ ID E ++ K + IP TS+ +E+ + I A K Sbjct: 113 VILAMTAID-EAKKTGMKIDRYELQKHLGIPVVFTSSVTGEGLEELKEKIVEYAQKN 168 >4NCF-A nrPDB Length = 457 Score = 53.4 bits (127), Expect = 7e-08, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 69/204 (33%), Gaps = 54/204 (26%) Query: 11 VIILGDSGVGKTSLMNQY----VNKKFSNQYKATIGADFLTKEVMVDDRLVT-------- 58 ILG GKT L+++ V + IGA + + + V Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 72 Query: 59 ----MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVT---APNTFKTLDSWRDEFLIQAS 111 + + DT G E F +L + +LV D+ T +++ RD Sbjct: 73 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRD------- 125 Query: 112 PRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIP---YFETSAKEAINVEQAFQ- 167 PFVV NKID Y IP + ++ AK++ V++ FQ Sbjct: 126 ----RKAPFVVALNKID-------------RLYDWKAIPNNSFRDSFAKQSRAVQEEFQS 168 Query: 168 -------TIARNALKQETEVELYN 184 +A L E + N Sbjct: 169 RYSKIQLELAEQGLNSELYFQNKN 192 >3A1U-A nrPDB Length = 258 Score = 53.0 bits (126), Expect = 8e-08, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 62/192 (32%), Gaps = 21/192 (10%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG- 66 ++KV + G VGKTSL N K + + T+ + D G Sbjct: 5 MVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKG--YTINLIDLPGT 62 Query: 67 -QERFQSLGVAFYR------GADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 119 + S+ R AD +LV D P + E L Sbjct: 63 YSLGYSSIDEKIARDYLLKGDADLVILVADSVNP---EQSLYLLLEILEMEKK------- 112 Query: 120 FVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 ++ ID E ++ K + IP TS+ +E+ + I A K Sbjct: 113 VILAMTAID-EAKKTGMKIDRYELQKHLGIPVVFTSSVTGEGLEELKEKIVEYAQKNTIL 171 Query: 180 VELYNEFPEPIK 191 + ++ E ++ Sbjct: 172 HRMILDYGEKVE 183 >3WBI-A nrPDB Length = 606 Score = 53.0 bits (126), Expect = 8e-08, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 69/204 (33%), Gaps = 54/204 (26%) Query: 11 VIILGDSGVGKTSLMNQY----VNKKFSNQYKATIGADFLTKEVMVDDRLVT-------- 58 ILG GKT L+++ V + IGA + + + V Sbjct: 12 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 71 Query: 59 ----MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVT---APNTFKTLDSWRDEFLIQAS 111 + + DT G E F +L + +LV D+ T +++ RD Sbjct: 72 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRD------- 124 Query: 112 PRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIP---YFETSAKEAINVEQAFQ- 167 PFVV NKID Y IP + ++ AK++ V++ FQ Sbjct: 125 ----RKAPFVVALNKID-------------RLYDWKAIPNNSFRDSFAKQSRAVQEEFQS 167 Query: 168 -------TIARNALKQETEVELYN 184 +A L E + N Sbjct: 168 RYSKIQLELAEQGLNSELYFQNKN 191 >4V8Z-CV nrPDB Length = 586 Score = 53.0 bits (126), Expect = 8e-08, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 70/201 (34%), Gaps = 48/201 (23%) Query: 11 VIILGDSGVGKTSLMNQY----VNKKFSNQYKATIGADFLTKEVMVDDRLVT-------- 58 ILG GKT L+++ V + IGA + + + V Sbjct: 8 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67 Query: 59 ----MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVT---APNTFKTLDSWRDEFLIQAS 111 + + DT G E F +L + +LV D+ T +++ RD Sbjct: 68 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRD------- 120 Query: 112 PRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQ---- 167 PFVV NKID R W NN + ++ AK++ V++ FQ Sbjct: 121 ----RKAPFVVALNKID---------RLYDWKAIPNN-SFRDSFAKQSRAVQEEFQSRYS 166 Query: 168 ----TIARNALKQETEVELYN 184 +A L E + N Sbjct: 167 KIQLELAEQGLNSELYFQNKN 187 >6D4G-A nrPDB Length = 271 Score = 53.0 bits (126), Expect = 9e-08, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 81 ADCCVLVFDVTAP--NTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKR 138 D +L DV+ F + Q + P V++ K D + + Sbjct: 162 VDGFLLGIDVSRGMNRNFDDQLKFVSNLYNQLAKTKK---PIVIVLTKCDEGVERYI-RD 217 Query: 139 AQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 173 A + SK N+ ETSA+ +NV+ AF T+ + Sbjct: 218 AHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLI 252 Score = 28.7 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Query: 15 GDSGVGKTSLMNQYVN---KKFSNQYKATIG-ADFLTKEVMVDD 54 G G+GK+ L N++V +F + + + +DF + V D Sbjct: 34 GQCGIGKSCLCNRFVRPSADEFHLDHTSVLSTSDFGGRVVNNDH 77 >3C5H-A nrPDB Length = 255 Score = 53.0 bits (126), Expect = 9e-08, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 6/95 (6%) Query: 81 ADCCVLVFDVTAP--NTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKR 138 D +L DV+ F + Q + P VV+ K D + + Sbjct: 163 VDGFLLGIDVSRGMNRNFDDQLKFVSNLYNQLAKTKK---PIVVVLTKCDEGVERYI-RD 218 Query: 139 AQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 173 A + SK N+ ETSA+ +NV+ AF T+ + Sbjct: 219 AHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLI 253 Score = 28.7 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Query: 15 GDSGVGKTSLMNQYVN---KKFSNQYKATIG-ADFLTKEVMVDD 54 G G+GK+ L N++V +F + + + +DF + V D Sbjct: 35 GQCGIGKSCLCNRFVRPSADEFHLDHTSVLSTSDFGGRVVNNDH 78 >4UJC-AB nrPDB Length = 627 Score = 52.2 bits (124), Expect = 1e-07, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 36/189 (19%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV-------------DDRLV 57 + +LG GKT ++++ + + I V + D V Sbjct: 41 ICVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLEAINEQTKMIKNFDRENV 100 Query: 58 T---MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD 114 M I DT G E F +L D +LV D+ + + + + Sbjct: 101 RIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVDI--------MHGLEPQTIESINLLK 152 Query: 115 PENFPFVVLGNKID-LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 173 + PF+V NKID L + + + A K+ N + F+ A+ Sbjct: 153 SKKCPFIVALNKIDRLYDWKKSPDSDVAATLK-----------KQKKNTKDEFEERAKAI 201 Query: 174 LKQETEVEL 182 + + + L Sbjct: 202 IVEFAQQGL 210 >4ARZ-A nrPDB Length = 310 Score = 51.8 bits (123), Expect = 2e-07, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 62/155 (40%), Gaps = 18/155 (11%) Query: 10 KVIILGDSGVGKTSLMNQYVNK--KFSN-QYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66 K++++G SG GK+S+ + + F + ATI + + + +T+ +WD G Sbjct: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN---MTLNLWDCGG 64 Query: 67 QE-----RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121 Q+ F ++ + VFDV + K ++ + + Sbjct: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 Query: 122 VLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSA 156 + +K+DL KR + + N+ ETS+ Sbjct: 125 L--HKMDLVQ---LDKREELFQIMMKNLS--ETSS 152 >5ZZM-A nrPDB Length = 426 Score = 51.1 bits (121), Expect = 3e-07, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 68/183 (37%), Gaps = 23/183 (12%) Query: 11 VIILGDSGVGKTSLMNQYVNKKF--SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 V ++G + GK++L N+ + ++Q AT+ +V V DT G Sbjct: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLA---DTVGFI 256 Query: 69 RF--QSLGVAF------YRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 R L AF R A + V D + +++ D P Sbjct: 257 RHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEA----VNTVLEEIDAHEIPT 312 Query: 121 VVLGNKID-LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179 +++ NKID LE+ + R + +K N + SA+ + Q FQ + + + Sbjct: 313 LLVMNKIDMLEDFEPRIDRDEE---NKPNRVWL--SAQTGAGIPQLFQALTERLSGEVAQ 367 Query: 180 VEL 182 L Sbjct: 368 HTL 370 >3K53-A nrPDB Length = 271 Score = 49.9 bits (118), Expect = 7e-07, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 67/189 (35%), Gaps = 16/189 (8%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERF 70 V ++G+ VGKT++ N + + + + ++ + D G Sbjct: 6 VALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGIMEYREKE--FLVVDLPGIYSL 63 Query: 71 QS------LGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLG 124 + + F + V+V D+ + + E +++ Sbjct: 64 TAHSIDELIARNFILDGNADVIV-DIVDS------TCLMRNLFLTLELFEMEVKNIILVL 116 Query: 125 NKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYN 184 NK DL ++ A + + +P T+AK+ VE+ + IA A + T + Sbjct: 117 NKFDLLKKKGAKIDIKKM-RKELGVPVIPTNAKKGEGVEELKRMIALMAEGKVTTNPIIP 175 Query: 185 EFPEPIKLD 193 + E I+ + Sbjct: 176 RYDEDIERE 184 >3LLU-A nrPDB Length = 196 Score = 49.9 bits (118), Expect = 7e-07, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 67/182 (36%), Gaps = 24/182 (13%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD---DRLVTMQIWDTAG 66 +++++G GK+S+ +K N+ T+ + K D V QIWD G Sbjct: 22 RILLMGLRRSGKSSIQKVVFHKMSPNE---TLFLESTNKIYKDDISNSSFVNFQIWDFPG 78 Query: 67 QERFQSLGVAF---YRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123 Q F + +RG + V D + + L NF + Sbjct: 79 QMDFFDPTFDYEMIFRGTGALIYVIDAQD-DYMEALTRLHITVSKAYKVNPDMNFEVFI- 136 Query: 124 GNKID--LENRQVATKRAQAWCY---------SKNNIPYFETSAKEAINVEQAFQTIARN 172 +K+D ++ ++ T+R K ++ ++ TS ++ +AF + + Sbjct: 137 -HKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTS-IYDHSIFEAFSKVVQK 194 Query: 173 AL 174 + Sbjct: 195 LI 196 >2Q3F-A nrPDB Length = 181 Score = 48.8 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 71/182 (39%), Gaps = 24/182 (13%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV---MVDDRLVTMQIWDTAG 66 +++++G GK+S+ +K N+ T+ + K + + V QIWD G Sbjct: 6 RILLMGLRRSGKSSIQKVVFHKMSPNE---TLFLESTNKICREDVSNSSFVNFQIWDFPG 62 Query: 67 QERFQSLGVAF---YRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123 Q F + +RG + V D + + L + + + + F V Sbjct: 63 QIDFFDPTFDYEMIFRGTGALIFVIDSQD-DYMEALARLH--LTVTRAYKVNTDINFEVF 119 Query: 124 GNKID--LENRQVATKRAQAWCY---------SKNNIPYFETSAKEAINVEQAFQTIARN 172 +K+D ++ ++ T+R K ++ ++ TS ++ +AF + + Sbjct: 120 IHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKIHLSFYLTS-IYDHSIFEAFSKVVQK 178 Query: 173 AL 174 + Sbjct: 179 LI 180 >4AC9-A nrPDB Length = 482 Score = 48.4 bits (114), Expect = 2e-06, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 55/181 (30%), Gaps = 26/181 (14%) Query: 1 MTSRKKVLLK---VIILGDSGVGKTSLMNQYVN-------KKFSNQYKATIGADFLTKEV 50 + R + K + I G GKT+L K K I D Sbjct: 9 IEGRPHMDFKNINLGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAF 68 Query: 51 MVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110 +++ +T+ D G V+ D ++V D + + Sbjct: 69 KLENYRITL--VDAPGHADLIRAVVSAADIIDLALIVVDAKEGP--------KTQTGEHM 118 Query: 111 SPRDPENFPFVVLGNKID------LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQ 164 D N P +V+ K D ++ ++ K ++ N SAK V++ Sbjct: 119 LILDHFNIPIIVVITKSDNAGTEEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDE 178 Query: 165 A 165 Sbjct: 179 L 179 >3GEE-A nrPDB Length = 476 Score = 48.4 bits (114), Expect = 2e-06, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 54/160 (33%), Gaps = 14/160 (8%) Query: 12 IILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE--- 68 +I G GK++L+N + ++ + +E + D+ ++ DTAG Sbjct: 237 VIAGKPNAGKSTLLNTLLGQERAIVSHMPGTTRDYIEECFIHDKT-MFRLTDTAGLREAG 295 Query: 69 ---RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125 + + + + A+ ++++ + T + LD E + F+ + N Sbjct: 296 EEIEHEGIRRSRMKMAEADLILY-LLDLGT-ERLDDELTEIRELKAAHPAAK--FLTVAN 351 Query: 126 KIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQA 165 K+D R SA ++ Sbjct: 352 KLD---RAANADALIRAIADGTGTEVIGISALNGDGIDTL 388 >6CES-C nrPDB Length = 399 Score = 48.4 bits (114), Expect = 2e-06, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 69/190 (36%), Gaps = 24/190 (12%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD---DRLVTMQIWDTAG 66 +++++G GK S+ +K N+ T+ + K D V QIWD G Sbjct: 63 RILLMGLRRSGKNSIQKVVFHKMSPNE---TLFLESTNKIYKDDISNSSFVNFQIWDFPG 119 Query: 67 QERFQSLGVAF---YRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123 Q F + +RG + V D + + L NF + Sbjct: 120 QMDFFDPTFDYEMIFRGTGALIYVIDAQD-DYMEALTRLHITVSKAYKVNPDMNFEVFI- 177 Query: 124 GNKID--LENRQVATKRAQAWCY---------SKNNIPYFETSAKEAINVEQAFQTIARN 172 +K+D ++ ++ T+R K ++ ++ TS ++ +AF + + Sbjct: 178 -HKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTS-IYDHSIFEAFSKVVQK 235 Query: 173 ALKQETEVEL 182 + Q +E Sbjct: 236 LIPQLPTLEN 245 >1LNZ-A nrPDB Length = 342 Score = 48.0 bits (113), Expect = 3e-06, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 69/189 (36%), Gaps = 14/189 (7%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKF-SNQYKATIGADFLTKEVMVDDRLVTMQIWDT 64 KVL V ++G VGK++L++ + K Y T L D R M D Sbjct: 156 KVLADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMA--DL 213 Query: 65 AGQ----ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD----PE 116 G + LG F R + ++ V + + D + D I + Sbjct: 214 PGLIEGAHQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYNLRLT 273 Query: 117 NFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176 P +++ NK+D+ + + + P F SA + + +A N L+ Sbjct: 274 ERPQIIVANKMDMPEAAENLEAFKEKLTD--DYPVFPISAVTREGLRELLFEVA-NQLEN 330 Query: 177 ETEVELYNE 185 E LY+E Sbjct: 331 TPEFPLYDE 339 >3PR1-A nrPDB Length = 195 Score = 46.8 bits (110), Expect = 6e-06, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 64/188 (34%), Gaps = 41/188 (21%) Query: 11 VIILGDSGVGKTSLMNQYVNKK---FSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG- 66 V +G S VGK+SL+N N+K S T +F +V+ + D G Sbjct: 26 VAFVGRSNVGKSSLLNALFNRKIAFVSKTPGKTRSINFY----LVNSKYY---FVDLPGY 78 Query: 67 -------QER--FQSLGVAFYRGA----DCCVLVFD--VTAPNTFKTLDSWRDEFLIQAS 111 +ER ++ L +++ +LV D + ++ + W Sbjct: 79 GYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLV-DGRIPPQDSDLMMVEWMKSL----- 132 Query: 112 PRDPENFPFVVLGNKID---LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQT 168 N PF ++ K+D + R + + TS+ + + Sbjct: 133 -----NIPFTIVLTKMDKVKMSERAKKLEEHRKVFSKYGEYTIIPTSSVTGEGISEL-LD 186 Query: 169 IARNALKQ 176 + LK+ Sbjct: 187 LISTLLKE 194 >5H7J-A nrPDB Length = 743 Score = 46.8 bits (110), Expect = 7e-06, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 60/184 (32%), Gaps = 36/184 (19%) Query: 19 VGKTSLMNQYVNKK---------------FSNQYKA---TIGADFLTKEVMVDDRLVTMQ 60 GKT+L + + F Q +A TI A ++ + + + Sbjct: 35 HGKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNYEGKDYLIN 94 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 + DT G F R D ++V D ++ + E Sbjct: 95 LIDTPGHVDFGGDVTRAMRAIDGVIIVVD--------AVEGVMPQTETVVRQALREYVKP 146 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180 V+ NK+D R++ Q E +K ++V + Q A K++ V Sbjct: 147 VLFINKVDRLIRELKLTPQQM----------MERFSKIIMDVNRLIQRYAPEEYKKKWMV 196 Query: 181 ELYN 184 ++ + Sbjct: 197 KVED 200 >3WXM-A nrPDB Length = 447 Score = 46.4 bits (109), Expect = 8e-06, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 57/195 (29%), Gaps = 42/195 (21%) Query: 9 LKVIILGDSGVGKTSLMNQYV----------------------NKKFSNQYKATIGADFL 46 + ++++G GK++L+ + + F + + Sbjct: 10 MNLVVIGHVDHGKSTLVGHLLYRLGYIEEKKLKELEEQAKSRGKESFKFAWILDKMKEER 69 Query: 47 TKEVMVD-------DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTL 99 + + +D + I D G F + AD +LV F+ Sbjct: 70 ERGITIDLTFMKFETKKYVFTIIDAPGHRDFVKNMITGASQADAAILVVSARKGE-FEAG 128 Query: 100 DSWRDEFLIQASPRDPENFPFVVLG-NKIDLEN-----------RQVATKRAQAWCYSKN 147 S + +++ NK+D + V K + Y + Sbjct: 129 MSTEGQTREHLLLARTMGIEQIIVAVNKMDAPDVNYDQKRYEFVVSVLKKFMKGLGYQVD 188 Query: 148 NIPYFETSAKEAINV 162 IP+ SA + N+ Sbjct: 189 KIPFIPVSAWKGDNL 203 >5H7K-A nrPDB Length = 397 Score = 46.1 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 60/184 (32%), Gaps = 36/184 (19%) Query: 19 VGKTSLMNQYVNKK---------------FSNQYKA---TIGADFLTKEVMVDDRLVTMQ 60 GKT+L + + F Q +A TI A ++ + + + Sbjct: 35 HGKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNYEGKDYLIN 94 Query: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 + DT G F R D ++V D ++ + E Sbjct: 95 LIDTPGHVDFGGDVTRAMRAIDGVIIVVD--------AVEGVMPQTETVVRQALREYVKP 146 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180 V+ NK+D R++ Q E +K ++V + Q A K++ V Sbjct: 147 VLFINKVDRLIRELKLTPQQM----------MERFSKIIMDVNRLIQRYAPEEYKKKWMV 196 Query: 181 ELYN 184 ++ + Sbjct: 197 KVED 200 >5KUT-A nrPDB Length = 189 Score = 46.1 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 57/150 (38%), Gaps = 14/150 (9%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 62 +++ VLL ++G GVGK++ + ++ + +Q + V V+ + + + Sbjct: 5 TQRSVLL-CKVVGACGVGKSAFLQAFLGRGLGHQDTREQPPGYAIDTVQVNGQEKYLILC 63 Query: 63 DTA--GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120 + G L + D L+FD + P +F S + P Sbjct: 64 EVGTDGL-----LATSLDATCDVACLMFDGSDPKSFAHCAS------VYKHHYMDGQTPC 112 Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIP 150 + + +K DL + + A K+ +P Sbjct: 113 LFVSSKADLPEGVAVSGPSPAEFCRKHRLP 142 >4DCU-A nrPDB Length = 456 Score = 45.7 bits (107), Expect = 1e-05, Method: Composition-based stats. Identities = 30/197 (15%), Positives = 58/197 (29%), Gaps = 29/197 (14%) Query: 1 MTSRKKVLLK--VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVT 58 + R + K V I+G VGK+++ N+ ++ S T G + Sbjct: 14 LVPRGSHMGKPVVAIVGRPNVGKSTIFNRIAGERISIVED-TPGVTRDRIYSSAEWLNYD 72 Query: 59 MQIWDTAGQE--------RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110 + DT G + + + AD + + V D + L + Sbjct: 73 FNLIDTGGIDIGDEPFLAQIRQQAEIAMDEADVIIFM--VNGREGVTAADEEVAKILYRT 130 Query: 111 SPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFE---TSAKEAINVEQAFQ 167 P V+ NK+D +A Y ++ + E S + + Sbjct: 131 KK------PVVLAVNKLD-------NTEMRANIYDFYSLGFGEPYPISGTHGLGLGDLLD 177 Query: 168 TIARNALKQETEVELYN 184 +A + Sbjct: 178 AVAEHFKNIPETKYNEE 194 Score = 39.1 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 62/196 (31%), Gaps = 33/196 (16%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKK---FSNQYKATIGADFLTKEVMVDDRLVTMQIWDT 64 +++ ++G VGK+SL+N + ++ SN T D + + + I DT Sbjct: 195 VIQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTT--RDAVDTSFTYNQQE--FVIVDT 250 Query: 65 AG----------QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD 114 AG E++ L V V + ++ A Sbjct: 251 AGMRKKGKVYETTEKYSVLRALKAIDRSEVVAVV-------LDGEEGIIEQDKRIAGYAH 303 Query: 115 PENFPFVVLGNKIDLENRQVATKRAQAWCYSKNN-----IPYFETSAKEAINVEQAFQTI 169 V++ NK D ++ +T + + P SA ++ T+ Sbjct: 304 EAGKAVVIVVNKWDAVDKDESTMKEFEENIRDHFQFLDYAPILFMSALT----KKRIHTL 359 Query: 170 ARNALKQETEVELYNE 185 +K L + Sbjct: 360 MPAIIKASENHSLRVQ 375 >3V00-C nrPDB Length = 356 Score = 44.9 bits (105), Expect = 2e-05, Method: Composition-based stats. Identities = 22/185 (11%), Positives = 51/185 (27%), Gaps = 42/185 (22%) Query: 33 FSNQYKATIGADFLTKEVMVDD--------RLVTMQIWDTAGQERFQSLGVAFYRGADCC 84 + Y T D L V + + +++D GQ + + + G Sbjct: 165 VTPGYVPT-EQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTAI 223 Query: 85 VLV-----FDVTAPNTFK--TLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATK 137 + +D+ + + F + + + ++ NK DL ++ Sbjct: 224 IFCVALSDYDLVLAEDEEMNRMHESMHLFNSICNNKWFTDTSIILFLNKKDLFEEKIKKS 283 Query: 138 RAQ------------AWCYSKNNIPYFE--------------TSAKEAINVEQAFQTIAR 171 + + + E T A + NV+ F + Sbjct: 284 PLTICYPEYAGSNTYEEAGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVTD 343 Query: 172 NALKQ 176 +K+ Sbjct: 344 IIIKE 348 Score = 28.3 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 14/19 (73%) Query: 9 LKVIILGDSGVGKTSLMNQ 27 +K+++LG GK++++ Q Sbjct: 36 VKLLLLGAGESGKSTIVKQ 54 >3JB9-B nrPDB Length = 984 Score = 44.9 bits (105), Expect = 3e-05, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 47/137 (34%), Gaps = 28/137 (20%) Query: 12 IILGDSGVGKTSLM------------------NQYVNKKFSNQY-KATIGADFLTKEVM- 51 I+ G GK++L+ +Y + + + +I + LT V Sbjct: 145 IVAGHLHHGKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMSIKSTPLTLAVSD 204 Query: 52 VDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQAS 111 + + Q DT G F A +D VLV DV T + L Sbjct: 205 MKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVVDVIEGVMINTTRIIKHAIL---- 260 Query: 112 PRDPENFPFVVLGNKID 128 + P V++ NK+D Sbjct: 261 ----HDMPIVLVLNKVD 273 >5KU1-A nrPDB Length = 424 Score = 44.9 bits (105), Expect = 3e-05, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 20/130 (15%) Query: 8 LLKVIILGDSGVGKTSLMNQYVN------KKFSNQYKATIGADFLTKEVMVDDRLVTMQI 61 + + ++G GK+ ++ + KK +K+ + V V + + + Sbjct: 242 VFRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKSYYAIN----TVYVYGQEKYLLL 297 Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121 D + E + D LV+DV+ P +F+ + + + P + Sbjct: 298 HDISESEFLTEAEIIC----DVVCLVYDVSNPKSFEYCARIFKQHFMDSR------IPCL 347 Query: 122 VLGNKIDLEN 131 ++ K DL Sbjct: 348 IVAAKSDLHE 357 >2WJG-A nrPDB Length = 188 Score = 44.5 bits (104), Expect = 3e-05, Method: Composition-based stats. Identities = 23/186 (12%), Positives = 61/186 (32%), Gaps = 16/186 (8%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++ ++G+ VGK+++ N + + + E + ++ D G Sbjct: 8 YEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGE--KFKVVDLPGVY 65 Query: 69 RFQSLGVAFYRGADCCV-----LVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123 + + D + LV ++ + + + + ++ Sbjct: 66 SLTANSIDEIIARDYIINEKPDLVVNIVDATALERNLYLTLQLMEMGAN-------LLLA 118 Query: 124 GNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELY 183 NK+DL + + + + SA + + +E+ + A+K + E+ Sbjct: 119 LNKMDLA-KSLGIEIDVDKLEKILGVKVVPLSAAKKMGIEEL-KKAISIAVKDKKTAEIK 176 Query: 184 NEFPEP 189 EP Sbjct: 177 YPNFEP 182 >2P8Y-T nrPDB Length = 842 Score = 44.5 bits (104), Expect = 3e-05, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 58/194 (29%), Gaps = 52/194 (26%) Query: 13 ILGDSGVGKTSLMN-----------------QYVNKKFSNQ-------------YKATIG 42 ++ GK++L + ++ + + Q Y Sbjct: 24 VIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMSD 83 Query: 43 ADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSW 102 D + D + + D+ G F S A R D ++V D +T Sbjct: 84 EDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVL 143 Query: 103 RDEFLIQASPRDPENFPFVVLGNKID--LENRQVATKRAQAWCYSKNNIPYFETSAKEAI 160 R + P VV+ NK+D L QV+ + ++T A+ Sbjct: 144 RQALGERIKP--------VVVINKVDRALLELQVSKED------------LYQTFARTVE 183 Query: 161 NVEQAFQTIARNAL 174 +V T A L Sbjct: 184 SVNVIVSTYADEVL 197 >5KSO-A nrPDB Length = 190 Score = 44.1 bits (103), Expect = 4e-05, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 20/130 (15%) Query: 8 LLKVIILGDSGVGKTSLMNQYVN------KKFSNQYKATIGADFLTKEVMVDDRLVTMQI 61 + + ++G GK+ ++ + KK +K+ + V V + + + Sbjct: 8 VFRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKSYYAIN----TVYVYGQEKYLLL 63 Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121 D + E + D LV+DV+ P +F+ + + + P + Sbjct: 64 HDISESEFLTEAEIIC----DVVCLVYDVSNPKSFEYCARIFKQHFMDSR------IPCL 113 Query: 122 VLGNKIDLEN 131 ++ K DL Sbjct: 114 IVAAKSDLHE 123 >5X4B-A nrPDB Length = 162 Score = 44.1 bits (103), Expect = 4e-05, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 54/173 (31%), Gaps = 27/173 (15%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE-- 68 V I+G VGK+++ N+ ++ S T G + + DT G + Sbjct: 5 VAIVGRPNVGKSTIFNRIAGERISIVED-TPGVTRDRIYSSAEWLNYDFNLIDTGGIDIG 63 Query: 69 ------RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 + + AD + + V D + L + P V+ Sbjct: 64 DEPFLAQIRQQAEIAMDEADVIIFM--VNGREGVTAADEEVAKILYRTKK------PVVL 115 Query: 123 LGNKIDLENRQVATKRAQAWCYSKNNIPYFE---TSAKEAINVEQAFQTIARN 172 NK+D +A Y ++ + E S + + +A + Sbjct: 116 AVNKLD-------NTEMRANIYDFYSLGFGEPYPISGTHGLGLGDLLDAVAEH 161 >3FTQ-A nrPDB Length = 274 Score = 44.1 bits (103), Expect = 4e-05, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 34/72 (47%), Gaps = 9/72 (12%) Query: 4 RKKVLLKVIILGDSGVGKTSLMNQ-YVNKKFSNQYKA--------TIGADFLTKEVMVDD 54 +K ++++G+SG+GK++L+N ++ + + T+ + T E+ Sbjct: 1 KKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERG 60 Query: 55 RLVTMQIWDTAG 66 + + + DT G Sbjct: 61 VKLRLTVVDTPG 72 >1UDX-A nrPDB Length = 416 Score = 44.1 bits (103), Expect = 4e-05, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 57/173 (32%), Gaps = 20/173 (11%) Query: 11 VIILGDSGVGKTSLMNQYV--NKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA--- 65 V ++G GK+SL+ + K + T+ + EV + D Sbjct: 160 VGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEV---SEEERFTLADIPGII 216 Query: 66 -GQERFQSLGVAFYR---GADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121 G + LG+ F R + V D KTL++ R E P + Sbjct: 217 EGASEGKGLGLEFLRHIARTRVLLYVLDAAD-EPLKTLETLRKEVGAYDPALLRR--PSL 273 Query: 122 VLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAIN---VEQAFQTIAR 171 V NK+DL + A A + SA +++A + R Sbjct: 274 VALNKVDLLEEEAVKALADALARE--GLAVLPVSALTGAGLPALKEALHALVR 324 >1EFM-A nrPDB Length = 379 Score = 44.1 bits (103), Expect = 5e-05, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 33/128 (25%), Gaps = 9/128 (7%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 62 R K + V +G GKT+L A G T V D Sbjct: 6 ERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARGITINTSHVEYDTPTRHYAHV 65 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP-FV 121 D G + + D +LV T + P + Sbjct: 66 DCPGHADYVKNMITGAAQMDGAILVVAATDGP--------MPQTREHILLGRQVGVPYII 117 Query: 122 VLGNKIDL 129 V NK D+ Sbjct: 118 VFLNKCDM 125 >6ID0-C nrPDB Length = 972 Score = 43.7 bits (102), Expect = 5e-05, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 45/148 (30%), Gaps = 28/148 (18%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSN---QYKATI------------GADF 45 + +++ V + G GKT ++ + + +Y + G Sbjct: 122 LMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGI 181 Query: 46 LTKEVMV-----DDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLD 100 + V V + I DT G F A R +D VL D + + Sbjct: 182 KSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAA-----EGVM 236 Query: 101 SWRDEFLIQASPRDPENFPFVVLGNKID 128 + + A E V NKID Sbjct: 237 LNTERLIKHAV---QERLAVTVCINKID 261 >2QAG-A nrPDB Length = 361 Score = 43.7 bits (102), Expect = 5e-05, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 34/72 (47%), Gaps = 9/72 (12%) Query: 4 RKKVLLKVIILGDSGVGKTSLMNQ-YVNKKFSNQYKA--------TIGADFLTKEVMVDD 54 +K ++++G+SG+GK++L+N ++ + + T+ + T E+ Sbjct: 33 KKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERG 92 Query: 55 RLVTMQIWDTAG 66 + + + DT G Sbjct: 93 VKLRLTVVDTPG 104 >2QU8-A nrPDB Length = 228 Score = 43.4 bits (101), Expect = 7e-05, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 75/206 (36%), Gaps = 40/206 (19%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV---DDRLVTMQIWDTAGQ 67 +I+ G VGK+S MN Q + F TK + V D +L QI DT G Sbjct: 32 IILSGAPNVGKSSFMNIVSRANVDVQSYS-----FTTKNLYVGHFDHKLNKYQIIDTPGL 86 Query: 68 E----------RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPEN 117 ++ + + + D+ + + + +++ + S + + Sbjct: 87 LDRAFENRNTIEMTTITALAHING-VILFIIDI----SEQCGLTIKEQINLFYSIKSVFS 141 Query: 118 FPFVVLG-NKIDLENRQVATKRAQAWCYSKNN-----IPYFETSAKEAINVEQAFQTIAR 171 +V+G NKID N + + + I + S + VEQA Sbjct: 142 NKSIVIGFNKIDKCNMDSLSIDNKLLIKQILDNVKNPIKFSSFSTLTGVGVEQA------ 195 Query: 172 NALKQETEVE-LYNEFPEPIKLDKNE 196 + T E L N+ E I LD+ + Sbjct: 196 ----KITACELLKNDQAESILLDQEQ 217 >2GTP-A nrPDB Length = 323 Score = 43.4 bits (101), Expect = 7e-05, Method: Composition-based stats. Identities = 19/182 (10%), Positives = 47/182 (25%), Gaps = 40/182 (21%) Query: 35 NQYKATIGADFLTKEVMVD-------DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLV 87 Y T T+ + + +++D GQ + + + G + Sbjct: 134 PNYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFC 193 Query: 88 -----FDVTAPNTFK--TLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQ 140 +D+ + + F + + + ++ NK DL ++ Sbjct: 194 VALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLT 253 Query: 141 ------------AWCYSKNNIPYFE--------------TSAKEAINVEQAFQTIARNAL 174 + + + T A + NV+ F + + Sbjct: 254 ICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVII 313 Query: 175 KQ 176 K Sbjct: 314 KN 315 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 14/19 (73%) Query: 9 LKVIILGDSGVGKTSLMNQ 27 +K+++LG GK++++ Q Sbjct: 3 VKLLLLGAGESGKSTIVKQ 21 >4WQY-BZ nrPDB Length = 758 Score = 43.4 bits (101), Expect = 8e-05, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 24/126 (19%) Query: 19 VGKTSLMNQYVN-----KKFSNQYKATIGADFLTKE----VMVDD-------RLVTMQIW 62 GKT+ + + K ++ DF+ +E + + + + I Sbjct: 90 AGKTTTTERILYYTGRIHKIGEVHEGAATMDFMEQERERGITITAAVTTCFWKDHRINII 149 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 DT G F R D ++VFD + + ++ + QA P + Sbjct: 150 DTPGHVDFTIEVERSMRVLDGAIVVFD-----SSQGVEPQSETVWRQAEKY---KVPRIA 201 Query: 123 LGNKID 128 NK+D Sbjct: 202 FANKMD 207 >3P27-A nrPDB Length = 483 Score = 43.0 bits (100), Expect = 8e-05, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 49/193 (25%), Gaps = 40/193 (20%) Query: 12 IILGDSGVGKTSLMNQYVNK------------------------KFSNQYKATIGADFLT 47 ++LG GK++LM + + KF+ T Sbjct: 37 VVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERERG 96 Query: 48 KEVMV-----DDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSW 102 V + I D G F + AD +L D + N F++ Sbjct: 97 VTVSICTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVDC-STNAFESGFDL 155 Query: 103 RDEFLIQASPRDPENF-PFVVLGNKIDLENRQVATKRA--QAWCYSKNNIPYFE------ 153 + ++ NK+D + +I +FE Sbjct: 156 DGQTKEHMLLASSLGIHNLIIAMNKMDNVDWSQQRFEEIKSKLLPYLVDIGFFEDNINWV 215 Query: 154 -TSAKEAINVEQA 165 S V + Sbjct: 216 PISGFSGEGVYKI 228 >3IZQ-1 nrPDB Length = 611 Score = 43.0 bits (100), Expect = 9e-05, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 49/193 (25%), Gaps = 40/193 (20%) Query: 12 IILGDSGVGKTSLMNQYVNK------------------------KFSNQYKATIGADFLT 47 ++LG GK++LM + + KF+ T Sbjct: 171 VVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERERG 230 Query: 48 KEVMV-----DDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSW 102 V + I D G F + AD +L D + N F++ Sbjct: 231 VTVSICTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVDC-STNAFESGFDL 289 Query: 103 RDEFLIQASPRDPENF-PFVVLGNKIDLENRQVATKRA--QAWCYSKNNIPYFE------ 153 + ++ NK+D + +I +FE Sbjct: 290 DGQTKEHMLLASSLGIHNLIIAMNKMDNVDWSQQRFEEIKSKLLPYLVDIGFFEDNINWV 349 Query: 154 -TSAKEAINVEQA 165 S V + Sbjct: 350 PISGFSGEGVYKI 362 >1ZUN-B nrPDB Length = 434 Score = 43.0 bits (100), Expect = 9e-05, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 61/199 (30%), Gaps = 47/199 (23%) Query: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKF------------SNQYKATIGADF------ 45 +K +L+ + G+ GK++L+ + ++ ++ T G D Sbjct: 20 ERKEMLRFLTCGNVDDGKSTLIGRLLHDSKMIYEDHLEAITRDSKKSGTTGDDVDLALLV 79 Query: 46 ------LTKEVMVD-------DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTA 92 + + +D I DT G E++ D +++ D A Sbjct: 80 DGLQAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDLAIILVD--A 137 Query: 93 PNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLE--NRQVATKRAQAWCYSKNNIP 150 +T + VV NK+DL + +V + I Sbjct: 138 RYGVQTQTRRHSYIASLLGIKH-----IVVAINKMDLNGFDERVFESIKADYLKFAEGIA 192 Query: 151 YFET-------SAKEAINV 162 + T SA + NV Sbjct: 193 FKPTTMAFVPMSALKGDNV 211 >2WJI-A nrPDB Length = 165 Score = 43.0 bits (100), Expect = 1e-04, Method: Composition-based stats. Identities = 18/162 (11%), Positives = 52/162 (32%), Gaps = 15/162 (9%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++ ++G+ VGK+++ N + + + E + ++ D G Sbjct: 4 YEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGE--KFKVVDLPGVY 61 Query: 69 RFQSLGVAFYRGADCCV-----LVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123 + + D + LV ++ + + + + ++ Sbjct: 62 SLTANSIDEIIARDYIINEKPDLVVNIVDATALERNLYLTLQLMEMGAN-------LLLA 114 Query: 124 GNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQA 165 NK+DL + + + + SA + + +E+ Sbjct: 115 LNKMDLA-KSLGIEIDVDKLEKILGVKVVPLSAAKKMGIEEL 155 >1R5O-A nrPDB Length = 467 Score = 42.6 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 58/199 (29%), Gaps = 44/199 (22%) Query: 9 LKVIILGDSGVGKTSL--MNQYVNKKFSNQY----------------------KATIGAD 44 + ++ +G GK++L ++ + +T Sbjct: 44 VNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEER 103 Query: 45 FLTKEVMV-----DDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTL 99 K V V + + D G + + + + AD VLV F+ Sbjct: 104 EKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVIS-ARRGEFEAG 162 Query: 100 DSWRDEFLIQASPRDPENFP-FVVLGNKIDLENRQVATKRAQAWCYS------------- 145 + A + VV+ NK+D + Q + +R + Sbjct: 163 FERGGQTREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNS 222 Query: 146 KNNIPYFETSAKEAINVEQ 164 K ++ Y SA NV+ Sbjct: 223 KTDVKYMPVSAYTGQNVKD 241 >4V6V-A1 nrPDB Length = 639 Score = 42.6 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 36/139 (25%), Gaps = 24/139 (17%) Query: 8 LLKVIILGDSGVGKTSLMNQYVN--------KKFSNQYKAT--------IGADFLTKEVM 51 ++ + IL GKT+L + T G T Sbjct: 3 IINLGILAHVDAGKTTLTESLLYTSGAIAELGSVDEGTTRTDTMNLERQRGITIQTAVTS 62 Query: 52 VDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQAS 111 V + I DT G F + D VL+ + + I Sbjct: 63 FQWEDVKVNIIDTPGHMDFLAEVYRSLSVLDGAVLLVSAKDG--------IQAQTRILFH 114 Query: 112 PRDPENFPFVVLGNKIDLE 130 P + NKID E Sbjct: 115 ALQIMKIPTIFFINKIDQE 133 >5CYO-A nrPDB Length = 274 Score = 41.8 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 9/67 (13%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKA---------TIGADFLTKEVMVDDRLVTM 59 ++++G SG+GK++L+N K S + TI +T ++ + + Sbjct: 5 FNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKL 64 Query: 60 QIWDTAG 66 + DT G Sbjct: 65 TVIDTPG 71 >3MCA-A nrPDB Length = 592 Score = 41.8 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 66/202 (32%), Gaps = 45/202 (22%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYV----------------------NKKFS------ 34 S K ++ +++ G GK++++ + + FS Sbjct: 172 SNPKPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLD 231 Query: 35 ---NQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVT 91 + + D + D ++ + D G F S +A AD VLV D + Sbjct: 232 TTEEERARGVTMDVASTTFESDKKIYEIG--DAPGHRDFISGMIAGASSADFAVLVVD-S 288 Query: 92 APNTFKTLDSWRDEFLIQASPRDPENFPFVVLG-NKIDLENRQ----------VATKRAQ 140 + N F+ + A +V+ NK+DL + V+ + Sbjct: 289 SQNNFERGFLENGQTREHAYLLRALGISEIVVSVNKLDLMSWSEDRFQEIKNIVSDFLIK 348 Query: 141 AWCYSKNNIPYFETSAKEAINV 162 + +N+ + SA N+ Sbjct: 349 MVGFKTSNVHFVPISAISGTNL 370 >3T5D-A nrPDB Length = 274 Score = 41.8 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 8/66 (12%) Query: 9 LKVIILGDSGVGKTSLMNQ-YVNKKFSNQY-------KATIGADFLTKEVMVDDRLVTMQ 60 ++++G+SG+GK++L+N ++ +S +Y K T+ + + + + Sbjct: 9 FTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLLLT 68 Query: 61 IWDTAG 66 I DT G Sbjct: 69 IVDTPG 74 >1TAG-A nrPDB Length = 324 Score = 41.8 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 58/187 (31%), Gaps = 46/187 (24%) Query: 33 FSNQYKATIGADFLTKEVMVDD--------RLVTMQIWDTAGQERFQSLGVAFYRGADCC 84 + Y T D L V + + +++D GQ + + + G C Sbjct: 133 VTPGYVPT-EQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTCI 191 Query: 85 VLV-----FDVTAPNTFKTLDSWRDEFLIQ---ASPRDPENFPFVVLGNKIDLENRQVAT 136 + + +D+ ++ + + + R V+ NK D+ + ++ Sbjct: 192 IFIAALSAYDMVLVED-DEVNRMHESLHLFNSICNHRYFATTSIVLFLNKKDVFSEKI-K 249 Query: 137 KRAQAWCYSKNN-------------IPYFE--------------TSAKEAINVEQAFQTI 169 K + C+ N + + E T A + NV+ F + Sbjct: 250 KAHLSICFPDYNGPNTYEDAGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAV 309 Query: 170 ARNALKQ 176 +K+ Sbjct: 310 TDIIIKE 316 Score = 28.3 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 14/19 (73%) Query: 9 LKVIILGDSGVGKTSLMNQ 27 +K+++LG GK++++ Q Sbjct: 4 VKLLLLGAGESGKSTIVKQ 22 >3TR5-A nrPDB Length = 528 Score = 41.8 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 47/154 (30%), Gaps = 30/154 (19%) Query: 1 MTSRKKVLLK--VIILGDSGVGKTSLMNQYVNKKFSNQYKATI----------------- 41 M+ K+ ++ I+ GKT+L + + + Q TI Sbjct: 4 MSVEKQTAMRRTFAIISHPDAGKTTLTEKLLLFGGAIQLAGTIKSRKAARHATSDWMELE 63 Query: 42 ---GADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKT 98 G T + + + + DT G F D ++V D Sbjct: 64 KQRGISVTTSVMQFPYKDYLINLLDTPGHADFTEDTYRTLTAVDSALMVIDAAKG----- 118 Query: 99 LDSWRDEFLIQASPRDPENFPFVVLGNKIDLENR 132 ++ + + R P + NK+D + R Sbjct: 119 VEPRTIKLMEVCRLRH---TPIMTFINKMDRDTR 149 >3PEN-A nrPDB Length = 403 Score = 41.8 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 60/185 (32%), Gaps = 31/185 (16%) Query: 9 LKVIILGDSGVGKTSLMNQYVN---KKFSNQYKATIG--------ADFLT----KEVMVD 53 + + ++G GKT+L+ K + IG ++T K D Sbjct: 9 VNIGVVGHVDHGKTTLVQAITGIWTSKKLGYAETNIGVCESCKKPEAYVTEPSCKSCGSD 68 Query: 54 DRLV---TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110 D + D G E + ++ D +LV P F + Sbjct: 69 DEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEP--FPQ-----PQTREHF 121 Query: 111 SPRDPENFP-FVVLGNKIDLENRQVATKRAQAWCYSKN-----NIPYFETSAKEAINVEQ 164 +++ NK+D+ +++ A + + N+P SA IN++ Sbjct: 122 VALGIIGVKNLIIVQNKVDVVSKEEALSQYRQIKQFTKGTWAENVPIIPVSALHKINIDS 181 Query: 165 AFQTI 169 + I Sbjct: 182 LIEGI 186 >4V89-AW nrPDB Length = 534 Score = 41.8 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 46/142 (32%), Gaps = 28/142 (19%) Query: 12 IILGDSGVGKTSLMNQY------------VNKKFSNQY--------KATIGADFLTKEVM 51 I+ GKT++ + V + SNQ+ + G T + Sbjct: 17 AIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSNQHAKSDWMEMEKQRGISITTSVMQ 76 Query: 52 VDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQAS 111 + + DT G E F DCC++V D ++ + + Sbjct: 77 FPYHDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKG-----VEDRTRKLMEVTR 131 Query: 112 PRDPENFPFVVLGNKIDLENRQ 133 R + P + NK+D + R Sbjct: 132 LR---DTPILTFMNKLDRDIRD 150 >5A9Z-CA nrPDB Length = 593 Score = 41.1 bits (95), Expect = 3e-04, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 37/132 (28%), Gaps = 22/132 (16%) Query: 11 VIILGDSGVGKTSLMNQYVN--KKFS------------NQYKATIGADFLTKEVMVDDRL 56 + I+ GKT+L+++ + F N + G L K Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAAIKWD 67 Query: 57 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPE 116 + I DT G F D +LV D + Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGP--------MPQTRFVTKKAFAY 119 Query: 117 NFPFVVLGNKID 128 +V+ NK+D Sbjct: 120 GLKPIVVINKVD 131 >2QTH-A nrPDB Length = 364 Score = 41.1 bits (95), Expect = 4e-04, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 66/189 (34%), Gaps = 28/189 (14%) Query: 11 VIILGDSGVGKTSLMNQYVN--KKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 + I+G + GKTSL N +K + T+ + +++R + + DT G Sbjct: 182 IGIVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMSP--KRYAIPINNRKIML--VDTVGFI 237 Query: 69 R----------FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENF 118 R F +L A Y +D +LV D T + L Sbjct: 238 RGIPPQIVDAFFVTLSEAKY--SDALILVIDST--FSENLLIETLQSSFEILREIGVSGK 293 Query: 119 PFVVLGNKIDLENRQVATKRA--QAWCYSKNNIPY--FETSAKEAINVEQAFQTIARNAL 174 P +V NKID N + K + + + SA + N+E + Sbjct: 294 PILVTLNKIDKINGDLYKKLDLVEKLSKELYSPIFDVIPISALKRTNLEL----LRDKIY 349 Query: 175 KQETEVELY 183 + T++ L Sbjct: 350 QLATQLSLE 358 >4R98-A nrPDB Length = 271 Score = 41.1 bits (95), Expect = 4e-04, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 56/184 (30%), Gaps = 26/184 (14%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG---- 66 + ++G+ GKT+L NQ + A + + + D VT+ D G Sbjct: 6 IGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFSTTDHQVTL--VDLPGTYSL 63 Query: 67 --------QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENF 118 + + AD + V D + + L Sbjct: 64 TTISSQTSLDEQIACHYILSGDADLLINVVDASN----------LERNLYLTLQLLELGI 113 Query: 119 PFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQET 178 P +V N +D+ +Q A P A + NV+ +A + K Sbjct: 114 PCIVALNMLDIAEKQNIRIEIDALSAR-LGCPVIPLVATDTKNVQFV-LKLAIDRYKANE 171 Query: 179 EVEL 182 VEL Sbjct: 172 NVEL 175 >2QAG-C nrPDB Length = 418 Score = 40.7 bits (94), Expect = 4e-04, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 35/71 (49%), Gaps = 8/71 (11%) Query: 4 RKKVLLKVIILGDSGVGKTSLMNQ-YVNKKFSNQY-------KATIGADFLTKEVMVDDR 55 ++ ++++G+SG+GK++L+N ++ +S +Y K T+ + + Sbjct: 27 KRGFEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGV 86 Query: 56 LVTMQIWDTAG 66 + + I DT G Sbjct: 87 QLLLTIVDTPG 97 >1JNY-A nrPDB Length = 435 Score = 40.7 bits (94), Expect = 5e-04, Method: Composition-based stats. Identities = 29/202 (14%), Positives = 63/202 (31%), Gaps = 43/202 (21%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVNK---------KFSNQYKATIGADF------- 45 S+K L +I++G GK++L+ + + K + + +G + Sbjct: 1 MSQKPHL-NLIVIGHVDHGKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLL 59 Query: 46 ------LTKEVMVD-------DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTA 92 + V ++ + I D G F + AD +LV Sbjct: 60 DRLKEERERGVTINLTFMRFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVS-AK 118 Query: 93 PNTFKTLDSWRDEFLIQASPRDPENFPFVVLG-NKIDLENRQVATKR-----------AQ 140 ++ S + +++ NK+DL KR + Sbjct: 119 KGEYEAGMSVEGQTREHIILAKTMGLDQLIVAVNKMDLTEPPYDEKRYKEIVDQVSKFMR 178 Query: 141 AWCYSKNNIPYFETSAKEAINV 162 ++ ++ N + + A N+ Sbjct: 179 SYGFNTNKVRFVPVVAPSGDNI 200 >5LZD-z nrPDB Length = 614 Score = 40.3 bits (93), Expect = 6e-04, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 53/182 (29%), Gaps = 22/182 (12%) Query: 11 VIILGDSGVGKTSLMNQYVN---KKFSNQYK--ATIGADFLTKEVMVDDRLVTMQIWDTA 65 + G GKT+L+ + + K TI + D R+ D Sbjct: 3 IATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWP-QPDGRVPGF--IDVP 59 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLG- 124 G E+F S +A G D +LV + + P + + Sbjct: 60 GHEKFLSNMLAGVGGIDHALLVVACDDGV--------MAQTREHLAILQLTGNPMLTVAL 111 Query: 125 NKIDLENRQVATKRAQAWCYSKNNIPYFE-----TSAKEAINVEQAFQTIARNALKQETE 179 K D + + + + E T+A E ++ + + + ++ Sbjct: 112 TKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATEGRGMDALREHLLQLPEREHAS 171 Query: 180 VE 181 Sbjct: 172 QH 173 >1SHZ-A nrPDB Length = 340 Score = 40.3 bits (93), Expect = 6e-04, Method: Composition-based stats. Identities = 17/156 (10%), Positives = 42/156 (26%), Gaps = 35/156 (22%) Query: 55 RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLV-----FD---VTAPNTFKTLDSWRDEF 106 + + +++D GQ + + G + +D + T + F Sbjct: 178 KDLHFKMFDVGGQRSERKKWFECFEGVTAIIFCVALSDYDQVLMEDRQT-NRMHESMKLF 236 Query: 107 LIQASPRDPENFPFVVLGNKIDLENRQVATKRAQ------------AWCYSKNNIPYFE- 153 + + + ++ NK DL ++ + + + Sbjct: 237 DSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDL 296 Query: 154 -------------TSAKEAINVEQAFQTIARNALKQ 176 T A + NV+ F + +K Sbjct: 297 NKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKN 332 Score = 33.0 bits (74), Expect = 0.10, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 9/61 (14%) Query: 9 LKVIILGDSGVGKTSLMNQ---YVNKKFS----NQYKATIGADF-LTKEVMVDDRLVTMQ 60 +K+++LG GK++ + Q + F +++ TI ++ V+VD R + Sbjct: 13 VKLLLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDARE-KLH 71 Query: 61 I 61 I Sbjct: 72 I 72 >4CSU-9 nrPDB Length = 390 Score = 39.5 bits (91), Expect = 0.001, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 70/216 (32%), Gaps = 32/216 (14%) Query: 11 VIILGDSGVGKTSLMNQYVNKKF-SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ-- 67 V +LG GK++ + K Y T L V +D+ + + D G Sbjct: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLG-VVRMDNEK-SFVVADIPGLIE 219 Query: 68 ----------------ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQAS 111 ER + L D D T P + E Sbjct: 220 GAAEGAGLGIRFLKHLERCRVL--LHLIDIDPI----DGTDP--VENARIIISELEKY-- 269 Query: 112 PRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKN-NIPYFETSAKEAINVEQAFQTIA 170 +D P ++ NKIDL ++ A ++A+A + Y+ SA + V+ + Sbjct: 270 SQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVM 329 Query: 171 RNALKQETEVELYNEFPEPIKLDKNERAKASAESCS 206 ++ + PE ++ ++ + E + Sbjct: 330 TFIIENPVVQAEEAKQPEKVEFMWDDYHRQQLEEIA 365 >3W5J-A nrPDB Length = 204 Score = 39.1 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 17/171 (9%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTM----QIWDTA 65 ++ +LG GK++L N+ I + L+ ++++ +V + I+D Sbjct: 5 RIALLGMPNTGKSTLFNRMTGGAARVGNWPGITVELLSGKILLGADMVEIIDLPGIYDLH 64 Query: 66 GQERFQSLGVAFYRGA--DCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123 G + + F D +++ + T +L + N VVL Sbjct: 65 GFSDDEQVVRHFLHDNVPDLALVILNATQIERQMSLLLQLKQL----------NMNIVVL 114 Query: 124 GNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174 N D + T ++ IP F+ S K ++A Q + R Sbjct: 115 LNMSDEAKQYGITIDSRKMS-ELLQIPVFQLSGKYGTGYQEALQAVTRALR 164 >1SUL-A nrPDB Length = 195 Score = 39.1 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 50/135 (37%), Gaps = 32/135 (23%) Query: 11 VIILGDSGVGKTSLMNQYVNKK----FSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66 + + G S VGK+S +N +N+K S++ T +F +++D + D G Sbjct: 26 IALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFY----IINDE---LHFVDVPG 78 Query: 67 ----------QERFQSLGVAFYRGAD---CCVLVFDVTAPNTFKTLDSWRDEFLIQASPR 113 +E + + + + V + D+ + + + EFL Sbjct: 79 YGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMY--EFLKYY--- 133 Query: 114 DPENFPFVVLGNKID 128 P +V+ K D Sbjct: 134 ---GIPVIVIATKAD 145 >6O81-S nrPDB Length = 472 Score = 39.1 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 28/222 (12%), Positives = 60/222 (27%), Gaps = 49/222 (22%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKK---FSNQYKA--TIGADFLTKEVM-VDDRLV- 57 ++ + + +G GK++++ F N+ + TI + ++ +DD Sbjct: 38 RQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYKLDDPSCP 97 Query: 58 -------------------------------TMQIWDTAGQERFQSLGVAFYRGADCCVL 86 + D G + + + D +L Sbjct: 98 RPECYRSCGSSTPDEFPTDIPGTKGNFKLVRHVSFVDCPGHDILMATMLNGAAVMDAALL 157 Query: 87 VFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKR-AQAWCYS 145 + I ++L NKIDL A ++ Q + Sbjct: 158 LIAGNESCPQPQTSEHLAAIEIMKLKH------ILILQNKIDLVKESQAKEQYEQILAFV 211 Query: 146 KN----NIPYFETSAKEAINVEQAFQTIARNALKQETEVELY 183 + P SA+ N+E + I + + Sbjct: 212 QGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIPVPPRDFTSE 253 >5VAI-A nrPDB Length = 380 Score = 39.1 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 30/97 (30%), Gaps = 9/97 (9%) Query: 45 FLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTF-------K 97 + VD V ++D GQ + + + + V ++ N Sbjct: 193 IFETKFQVD--KVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTN 250 Query: 98 TLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQV 134 L + F + R ++ NK DL +V Sbjct: 251 RLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKV 287 Score = 26.4 bits (57), Expect = 7.9, Method: Composition-based stats. Identities = 5/23 (21%), Positives = 14/23 (60%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQ 27 + ++++LG GK++++ Q Sbjct: 37 YRATHRLLLLGAGESGKSTIVKQ 59 >6FEC-S nrPDB Length = 422 Score = 39.1 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 5/69 (7%) Query: 120 FVVLGNKIDLENRQVATKR-AQAWCYSKN----NIPYFETSAKEAINVEQAFQTIARNAL 174 ++L NKIDL A ++ Q + + P SA+ N+E + I + Sbjct: 147 ILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIP 206 Query: 175 KQETEVELY 183 + Sbjct: 207 VPPRDFTSE 215 >2ODE-A nrPDB Length = 350 Score = 39.1 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 19/182 (10%), Positives = 47/182 (25%), Gaps = 40/182 (21%) Query: 35 NQYKATIGADFLTKEVMVD-------DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLV 87 + Y T T+ + + +++D GQ + + + G + Sbjct: 164 SNYIPTQQDVLRTRVKTTGIVETHFTFKDLYFKMFDVGGQRSERKKWIHCFEGVTAIIFC 223 Query: 88 -----FDVTAPNTFK--TLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQ 140 +D+ + + F + + ++ NK DL ++ Sbjct: 224 VALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTETSIILFLNKKDLFEEKIKRSPLT 283 Query: 141 ------------AWCYSKNNIPYFE--------------TSAKEAINVEQAFQTIARNAL 174 + + + T A + NV+ F + + Sbjct: 284 ICYPEYTGSNTYEEAAAYIQCQFEDLNRRKDTKEIYTHFTCATDTKNVQFVFDAVTDVII 343 Query: 175 KQ 176 K Sbjct: 344 KN 345 Score = 28.0 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 14/19 (73%) Query: 9 LKVIILGDSGVGKTSLMNQ 27 +K+++LG GK++++ Q Sbjct: 33 VKLLLLGAGESGKSTIVKQ 51 >5IRR-A nrPDB Length = 308 Score = 39.1 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 20/88 (22%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVN------KKFSNQYKATI----GADFLTKEVMVDD 54 KK +K+I++GDSG+GKT+L+ ++ + Y T + L+ V D Sbjct: 23 KKKYIKLIVVGDSGLGKTTLIKSLISIPGERLQVHDGSYTPTEQFRRDPESLSSTVSWRD 82 Query: 55 RLVTMQIW-----DTAG----QERFQSL 73 + IW DT G + F++L Sbjct: 83 EEDRV-IWVYKIQDTPGYGDELDVFRNL 109 >2D74-A nrPDB Length = 419 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 67/208 (32%), Gaps = 43/208 (20%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVN---KKFSNQYKA--TIGADFLTKEVMV------- 52 ++ + + ++G GKT+L S + + TI F E+ Sbjct: 8 RQAEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCSNCGRY 67 Query: 53 -----------DDRLV-TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVT----APNTF 96 + + + D+ G E + +A D +LV P T Sbjct: 68 STSPICPYCGHETEFIRRVSFIDSPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTR 127 Query: 97 KTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKN-----NIPY 151 + L + + + Q + ++ NKI+L +++ A + + N P Sbjct: 128 EHLMAL--QIIGQKN--------IIIAQNKIELVDKEKALENYRQIKEFIKGTVAENAPI 177 Query: 152 FETSAKEAINVEQAFQTIARNALKQETE 179 SA N++ + I + + Sbjct: 178 IPISALHGANIDVLVKAIEEFIPTPKRD 205 >1S0U-A nrPDB Length = 408 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 27/200 (13%), Positives = 54/200 (27%), Gaps = 36/200 (18%) Query: 9 LKVIILGDSGVGKTSLMNQYVN---KKFSNQYKATIGADFLTKEVMVDDRLV-------- 57 + + ++G GKTSL + S + + I + + Sbjct: 9 VNIGMVGHVDHGKTSLTKALTGVWTDRHSEELRRGISIRLGYADCEIRKCPQCGTYTTKP 68 Query: 58 -------------TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRD 104 + D+ G E + ++ D +LV P Sbjct: 69 RCPNCLAETEFLRRVSFVDSPGHETLMATMLSGASLMDGAILVIAANEPCPQPQTKEHLM 128 Query: 105 EFLIQASPRDPENFPFVVLGNKIDLENRQVATK--RAQAWCYS---KNNIPYFETSAKEA 159 I + +++ NKIDL + + A + N P SA Sbjct: 129 ALEILGIDK------IIIVQNKIDLVDEKQAEENYEQIKEFVKGTIAENAPIIPISAHHE 182 Query: 160 INVEQAFQTIARNALKQETE 179 N++ ++ + Sbjct: 183 ANID-VLLKAIQDFIPTPKR 201 >5W7Q-A nrPDB Length = 373 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 33/136 (24%), Gaps = 23/136 (16%) Query: 9 LKVIILGDSGVGKTSLMNQYV------NKKFSNQYKA--------TIGADFLTKEVMVDD 54 + + +G GKT+L + Y G T V + Sbjct: 6 VNIGTIGHVDHGKTTLTAAITTVLAKKGGAEAKAYDQIDNAPEEKARGITINTAHVEYET 65 Query: 55 RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD 114 D G + + D +LV + Sbjct: 66 ENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGP--------MPQTREHILLAR 117 Query: 115 PENFPFVVL-GNKIDL 129 P++V+ NK D+ Sbjct: 118 QVGVPYIVVFLNKCDM 133 >5LZY-jj nrPDB Length = 710 Score = 38.4 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 62/198 (31%), Gaps = 44/198 (22%) Query: 6 KVLLKVIILGDSGVGKTSLM-------------------------------NQYVNKKFS 34 K LL ++++G GK++LM +V + Sbjct: 284 KQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETG 343 Query: 35 NQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPN 94 + + + D + +++T+ D G + F + AD VLV D + Sbjct: 344 EERERGVTMDVGMTKFETTTKVITL--MDAPGHKDFIPNMITGAAQADVAVLVVD-ASRG 400 Query: 95 TFKTLDSWRDEFLIQASPRDPENFPFVVLG-NKIDLENRQVATKRA---------QAWCY 144 F+ + + + NK+D N Q + + + Sbjct: 401 EFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEITGKLGHFLKQAGF 460 Query: 145 SKNNIPYFETSAKEAINV 162 ++++ + TS N+ Sbjct: 461 KESDVGFIPTSGLSGENL 478 >5TY0-A nrPDB Length = 422 Score = 38.4 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 18/136 (13%) Query: 55 RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD 114 + I DT G F R D V+VFD + ++ + QA+ Sbjct: 81 ESHRINIIDTPGHVDFMIEVERSLRVLDGAVVVFD-----SVAGVEPQSETVWRQANKYG 135 Query: 115 PENFPFVVLGNKID---LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171 P +V NK+D +V ++ Q + + I E+ F+ + Sbjct: 136 ---VPRIVFVNKMDRMGANFLRVVSQIKQRLGSTPVVLQ-------LPIGAEEEFKGVID 185 Query: 172 NALKQETEVELYNEFP 187 + + N+ Sbjct: 186 LIKMKAIHWDEENKGM 201 >4Z54-A nrPDB Length = 287 Score = 38.4 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 9/67 (13%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV---------DDRLVTM 59 ++++G SG+GK++L+N + S + + + + K V + + + Sbjct: 20 FNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMKL 79 Query: 60 QIWDTAG 66 + DT G Sbjct: 80 TVIDTPG 86 >6OIK-A nrPDB Length = 354 Score = 38.4 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 50/181 (27%), Gaps = 41/181 (22%) Query: 36 QYKATIGADFLTKEVMVDD--------RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLV 87 Y+ T D L V + + +++D GQ + + + + Sbjct: 167 DYQPT-EQDILRTRVKTTGIVETHFTFKNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFC 225 Query: 88 FDVT-------APNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKR-- 138 ++ T + F + + + ++ NK DL ++ Sbjct: 226 VALSGYDQVLHEDETTNRMHESLMLFDSICNNKFFIDTSIILFLNKKDLFGEKIKKSPLT 285 Query: 139 ------------------AQAWCYSKNNIPYFE-----TSAKEAINVEQAFQTIARNALK 175 QA SKN P E T A + N++ F + + Sbjct: 286 ICFPEYTGPNTYEDAAAYIQAQFESKNRSPNKEIYCHMTCATDTNNIQVVFDAVTDIIIA 345 Query: 176 Q 176 Sbjct: 346 N 346 Score = 31.8 bits (71), Expect = 0.22, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 42/106 (39%), Gaps = 21/106 (19%) Query: 9 LKVIILGDSGVGKTSLMNQY-------VNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 61 +K+++LG GK++++ Q + + QYK + ++ + ++ Sbjct: 34 VKLLLLGAGESGKSTIVKQMKIIHEDGFSGEDVKQYKPVVYSN------TIQSLAAIVRA 87 Query: 62 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL 107 DT G E R AD ++ DV + + + + E L Sbjct: 88 MDTLGIEYGDKE-----RKADAKMVC-DVVSR--MEDTEPFSAELL 125 >5M04-A nrPDB Length = 360 Score = 38.0 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 57/175 (32%), Gaps = 32/175 (18%) Query: 11 VIILGDSGVGKTSLMNQYVNKKF-SNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ-- 67 V +LG GK++ + K Y T L V +D+ + + D G Sbjct: 182 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLG-VVRMDNEK-SFVVADIPGLIE 239 Query: 68 ----------------ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQAS 111 ER + L D D T P + E Sbjct: 240 GAAEGAGLGIRFLKHLERCRVL--LHLIDIDPI----DGTDP--VENARIIISELEKY-- 289 Query: 112 PRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKN-NIPYFETSAKEAINVEQA 165 +D P ++ NKIDL ++ A ++A+A + Y+ SA + V+ Sbjct: 290 SQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDL 344 >3MMP-A nrPDB Length = 678 Score = 38.0 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 35/142 (24%), Gaps = 23/142 (16%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVN-------------KKFSNQYKATI-GADFLTK 48 R K + V +G GKT+L + N + G T Sbjct: 291 ERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTS 350 Query: 49 EVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI 108 V D D G + + D +LV T + Sbjct: 351 HVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGP--------MPQTRE 402 Query: 109 QASPRDPENFP-FVVLGNKIDL 129 P +V NK D+ Sbjct: 403 HILLGRQVGVPYIIVFLNKCDM 424 >1PUJ-A nrPDB Length = 282 Score = 38.0 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDT 64 K ++ +I+G VGK++L+N+ K + G + V V +++ DT Sbjct: 117 KPRAIRALIIGIPNVGKSTLINRLAKKNIAKTGDRP-GITTSQQWVKVGKE---LELLDT 172 Query: 65 AG 66 G Sbjct: 173 PG 174 >1U0L-A nrPDB Length = 301 Score = 38.0 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 6/93 (6%) Query: 73 LGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENR 132 L D +LV V P T + D+FL+ A + E V++ NK+DL + Sbjct: 77 LTKPHVANVDQVILVVTVKMPETSTYI---IDKFLVLAEKNELET---VMVINKMDLYDE 130 Query: 133 QVATKRAQAWCYSKNNIPYFETSAKEAINVEQA 165 K + P +TSAK + +E+ Sbjct: 131 DDLRKVRELEEIYSGLYPIVKTSAKTGMGIEEL 163 Score = 26.4 bits (57), Expect = 8.8, Method: Composition-based stats. Identities = 9/16 (56%), Positives = 12/16 (75%) Query: 13 ILGDSGVGKTSLMNQY 28 + G SGVGK+SL+N Sbjct: 174 MAGLSGVGKSSLLNAI 189 >1ZCB-A nrPDB Length = 362 Score = 37.6 bits (86), Expect = 0.003, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 49/164 (29%), Gaps = 19/164 (11%) Query: 39 ATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFD--------V 90 T G E+ + V ++ D GQ + + + + + Sbjct: 187 PTKGIHEYDFEI----KNVPFKMVDVGGQRSERKRWFECFDSVTSILFLVSSSEFDQVLM 242 Query: 91 TAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIP 150 T L + F + R N ++ NK DL +V + + P Sbjct: 243 EDRQT-NRLTESLNIFETIVNNRVFSNVSIILFLNKTDLLEEKVQVVSIKDYFLEFEGDP 301 Query: 151 YFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDK 194 + +V++ R + + + LY+ F I + Sbjct: 302 HC------LRDVQKFLVECFRGKRRDQQQRPLYHHFTTAINTEN 339 Score = 35.7 bits (81), Expect = 0.015, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 9/68 (13%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQ---YVNKKFS----NQYKATIGADF-LTKEVMVD 53 R L+K+++LG GK++ + Q + F +++ TI ++ V+VD Sbjct: 27 GERSARLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVD 86 Query: 54 DRLVTMQI 61 R + I Sbjct: 87 ARE-KLHI 93 >4V5G-AZ nrPDB Length = 406 Score = 37.6 bits (86), Expect = 0.003, Method: Composition-based stats. Identities = 20/156 (12%), Positives = 37/156 (23%), Gaps = 24/156 (15%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATI---------------GADFLTKEVMVD 53 + V +G GKT+L + + G T V + Sbjct: 13 VNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYE 72 Query: 54 DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPR 113 D G + + D +LV + Sbjct: 73 TAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGP--------MPQTREHILLA 124 Query: 114 DPENFPFVVL-GNKIDLENRQVATKRAQAWCYSKNN 148 P++V+ NK+D+ + + N Sbjct: 125 RQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLN 160 >1HEY-A nrPDB Length = 128 Score = 37.6 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 7/94 (7%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA--- 65 LK +++G+ G GK+++ N F+N A G D L K + + W+ Sbjct: 5 LKFLVVGNGGTGKSTVRNLLKELGFNNVEDAEDGVDALNK-LQAGGYGFVISDWNMPNMD 63 Query: 66 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTL 99 G E +++ GA + V VTA + + Sbjct: 64 GLELLKTIRA---DGAMSALPVLMVTAEAKKENI 94 >5KCS-1w nrPDB Length = 639 Score = 37.6 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 38/137 (27%), Gaps = 24/137 (17%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNK-----------KFSNQYKATI-----GADFLTKEVM 51 ++ + +L GKT+L + K + + T+ G T Sbjct: 3 IINIGVLAHVDAGKTTLTESLLYNSGAITELGSVDKGTTRTDNTLLERQRGITIQTGITS 62 Query: 52 VDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQAS 111 + I DT G F + D +L+ + + I Sbjct: 63 FQWENTKVNIIDTPGHMDFLAEVYRSLSVLDGAILLISAKDGV--------QAQTRILFH 114 Query: 112 PRDPENFPFVVLGNKID 128 P + NKID Sbjct: 115 ALRKMGIPTIFFINKID 131 >5AR1-A nrPDB Length = 303 Score = 37.6 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 12/72 (16%) Query: 7 VLLKVIILGDSGVGKTSLMNQYVNKKF---------SNQYKATIGADFLTKEVMVDDRL- 56 + V+I+G SG G+++ +N ++ I + V ++D Sbjct: 26 ITFTVMIVGQSGSGRSTFINTLCGQQVVDTSTTILLPTDTSTEIDLQLREETVELEDDEG 85 Query: 57 --VTMQIWDTAG 66 + + I DT G Sbjct: 86 VKIQLNIIDTPG 97 >5W75-A nrPDB Length = 392 Score = 37.6 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 41/152 (26%), Gaps = 23/152 (15%) Query: 9 LKVIILGDSGVGKTSLM---NQYVNKKFSNQYKA-----------TIGADFLTKEVMVDD 54 + V +G GK++L +Y++ K QY G V + Sbjct: 5 VNVGTIGHVDHGKSTLTAAITKYLSLKGLAQYVPYDQIDKAPEEKARGITINITHVEYET 64 Query: 55 RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD 114 D G + + D +LV T + Sbjct: 65 EKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAATDGP--------MPQTREHVLLAR 116 Query: 115 PENFPFVVL-GNKIDLENRQVATKRAQAWCYS 145 P++++ NK D+ + + + Sbjct: 117 QVGVPYMIVFINKTDMVDDPELIELVEMEVRD 148 >3LX8-A nrPDB Length = 272 Score = 37.6 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 53/168 (31%), Gaps = 22/168 (13%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG---- 66 + ++G+ GKTSL N + + + V + ++I D G Sbjct: 6 IALIGNPNSGKTSLFNLITGHNQRVGNWPGVTVERKSGLVKKNKD---LEIQDLPGIYSM 62 Query: 67 ----QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 E + + AD + V D T + L + P + Sbjct: 63 SPYSPEEKVARDYLLSQRADSILNVVDATN----------LERNLYLTTQLIETGIPVTI 112 Query: 123 LGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA 170 N ID+ + Q Y +P TSA + V+Q + A Sbjct: 113 ALNMIDVLDGQGKKINVDKLSY-HLGVPVVATSALKQTGVDQVVKKAA 159 >4V6W-Az nrPDB Length = 844 Score = 37.6 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 55/162 (33%), Gaps = 42/162 (25%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMN-----------------QYVNKKFSNQYKA-TIG 42 + +K+ + + ++ GK++L + ++ + + Q + TI Sbjct: 12 LMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGAKAGETRFTDTRKDEQERCITIK 71 Query: 43 ADFLTKEVMVDDRL----------------VTMQIWDTAGQERFQSLGVAFYRGADCCVL 86 + ++ V+++ + + D+ G F S A R D ++ Sbjct: 72 STAISMYFEVEEKDLVFITHPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVTDGALV 131 Query: 87 VFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128 V D + +T R + P ++ NK+D Sbjct: 132 VVDCVSGVCVQTETVLRQAIAERIKP--------ILFMNKMD 165 >4ZKD-A nrPDB Length = 499 Score = 37.2 bits (85), Expect = 0.005, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 75/225 (33%), Gaps = 54/225 (24%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNK-------------KFSNQYKA------------- 39 + L + LGD+ GK++L+ + K S+ Sbjct: 17 PLNLTCLFLGDTNAGKSTLLGHLLYDLNEISMSSMRELQKKSSNLDPSSSNSFKVILDNT 76 Query: 40 ----TIGADFLTKEVMVDDRLV----TMQIWDTAGQERF---QSLGVAFYRGADCCVLVF 88 G K + V++ L+ T+ + DT G ++ ++L + VLV Sbjct: 77 KTERENGFSMFKKVIQVENDLLPPSSTLTLIDTPGSIKYFNKETLNSILTFDPEVYVLVI 136 Query: 89 D---VTAPNTFKTLDSWRDEFLIQASPRDPENFP---FVVLGNKIDL----ENRQVATKR 138 D + + ++ E L S + + ++L NK DL ++R + Sbjct: 137 DCNYDSWEKSLDGPNNQIYEILKVISYLNKNSACKKHLIILLNKADLISWDKHRLEMIQS 196 Query: 139 AQAWCYSKN------NIPYFETSAKEAINVEQAFQTIARNALKQE 177 + +N + S N+ + + I ++ K E Sbjct: 197 ELNYVLKENFQWTDAEFQFIPCSGLLGSNLNKT-ENITKSKYKSE 240 >4HI0-E nrPDB Length = 199 Score = 37.2 bits (85), Expect = 0.005, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 72/205 (35%), Gaps = 47/205 (22%) Query: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYK-ATIGADFLTKE---------VMVDDRLV 57 ++K+ + G G GKT+L+ S Y A I D TKE VM +R++ Sbjct: 1 MVKIGVCGPVGSGKTALIEALTR-HMSKDYDMAVITNDIYTKEDAEFMCKNSVMPRERII 59 Query: 58 TMQIWDTAG-------------QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRD 104 ++ T G E + + F + +L+ + D Sbjct: 60 GVE---TGGCPHTAIREDASMNLEAVEEMHGRF-PNLEL-LLIESGGDNLSATFNPELAD 114 Query: 105 EFLIQASPRDPENFPF----------VVLGNKIDL-----ENRQVATKRAQAWCYSKNNI 149 + + + P +++ NKIDL + +V + ++ K Sbjct: 115 FTIFVIDVAEGDKIPRKGGPGITRSDLLVINKIDLAPYVGADLKVMERDSKKMRGEK--- 171 Query: 150 PYFETSAKEAINVEQAFQTIARNAL 174 P+ T+ + ++ I RNAL Sbjct: 172 PFIFTNIRAKEGLDDVIAWIKRNAL 196 >6MTD-v nrPDB Length = 839 Score = 36.8 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 20/140 (14%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATI------------GADFLTK 48 + +K + + ++ GK++L + V K TI D Sbjct: 11 IMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIARCITIKSTAISLFYELSENDLNFI 70 Query: 49 EVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI 108 + D + + D+ G F S A R D ++V D + +T R Sbjct: 71 KQSKDGAGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAE 130 Query: 109 QASPRDPENFPFVVLGNKID 128 + P V++ NK+D Sbjct: 131 RIKP--------VLMMNKMD 142 >4ZV4-A nrPDB Length = 405 Score = 36.8 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 41/161 (25%), Gaps = 23/161 (14%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVN-------------KKFSNQYKATI-GADFLTK 48 R K + V +G GKT+L + N + G T Sbjct: 7 ERNKPHVNVGTIGHVDHGKTTLTAALTKVCSDTWGGSARAFDQIDNAPEEKARGITINTS 66 Query: 49 EVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI 108 V D + D G + + D +LV + Sbjct: 67 HVEYDSAVRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGP--------MPQTRE 118 Query: 109 QASPRDPENFPFVVL-GNKIDLENRQVATKRAQAWCYSKNN 148 P++V+ NK D+ + + + N Sbjct: 119 HILLSRQVGVPYIVVFLNKADMVDDAELLELVEMEVRDLLN 159 >4J0Q-A nrPDB Length = 433 Score = 36.8 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 39/153 (25%), Gaps = 25/153 (16%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATI---------------GADFLTKEVMVD 53 + V +G GKT+L S + + I G T V + Sbjct: 49 VNVGTIGHVDHGKTTLTAALTRVC-SEVFGSAIVEFDKIDSAPEEKARGITINTAHVEYN 107 Query: 54 DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPR 113 + D G + + D +LV + Sbjct: 108 STIRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGP--------MPQTREHILLS 159 Query: 114 DPENFPFVVL-GNKIDLENRQVATKRAQAWCYS 145 P++V+ NK DL + + + Sbjct: 160 RQVGVPYIVVFLNKADLVDDAELLELVEMEVRD 192 >4FID-A nrPDB Length = 340 Score = 36.8 bits (84), Expect = 0.007, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 37/116 (31%), Gaps = 14/116 (12%) Query: 35 NQYKATIG--ADFLTKEVMVDD-----RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLV 87 Y T TK + + + + + D GQ + V+F+ DC + V Sbjct: 132 EDYVPTEEDLIHNRTKTTGIHEYDFVVKDIPFHLIDVGGQRSERKKWVSFFSDVDCAIFV 191 Query: 88 FDVT--APNTFKT-----LDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVAT 136 + ++ L F + + ++ NK+DL ++ Sbjct: 192 TSLAEYDMKLYEDGNTSRLTESIAVFKDIMTNEFLKGAVKLIFLNKMDLFEEKLTK 247 Score = 32.2 bits (72), Expect = 0.16, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 3/45 (6%) Query: 11 VIILGDSGVGKTSLMNQ---YVNKKFSNQYKATIGADFLTKEVMV 52 V++LG GK+++ Q F Q +AT + + V Sbjct: 8 VMLLGSGESGKSTIAKQLKILFGGGFPEQERATHKSSICSNVVTC 52 >6D9H-A nrPDB Length = 355 Score = 36.8 bits (84), Expect = 0.007, Method: Composition-based stats. Identities = 21/183 (11%), Positives = 52/183 (28%), Gaps = 42/183 (22%) Query: 35 NQYKATIGADFLTKEVMVD-------DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLV 87 + Y T T+ + + +++D Q + + + G + Sbjct: 166 SDYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGAQRSERKKWIHCFEGVTAIIFC 225 Query: 88 -----FDVTAPNTFK--TLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVA----- 135 +D+ + + + F + + + ++ NK DL ++ Sbjct: 226 VALSAYDLVLAEDEEMNRMHASMKLFDSICNNKWFTDTSIILFLNKKDLFEEKITHSPLT 285 Query: 136 -----------TKRAQAWCYSKNN-----------IPYFETSAKEAINVEQAFQTIARNA 173 A ++ SK +F T + + NV+ F + Sbjct: 286 ICFPEYTGANKYDEAASYIQSKFEDLNKRKDTKEIYTHF-TCSTDTKNVQFVFDAVTDVI 344 Query: 174 LKQ 176 +K Sbjct: 345 IKN 347 Score = 26.4 bits (57), Expect = 7.8, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 8/76 (10%) Query: 9 LKVIILGDSGVGKTSLMNQ---YVNKKFSN----QYKATIGADFLTKEVMVDDRLVTMQI 61 +K+++LG GK +++ Q +S QY+A + ++ + + + + +QI Sbjct: 34 VKLLLLGAGESGKNTIVKQMKIIHEDGYSEEECRQYRAVVYSNTIQSIMAIVKAMGNLQI 93 Query: 62 WDTAGQERFQSLGVAF 77 D A R F Sbjct: 94 -DFADPSRADDARQLF 108 >5LZT-jj nrPDB Length = 637 Score = 36.4 bits (83), Expect = 0.008, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 59/202 (29%), Gaps = 43/202 (21%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQY------VNKKFSNQYKATIGADFLT----------- 47 KK + V+ +G GK+++ Q V+K+ +Y+ Sbjct: 209 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 268 Query: 48 -------KEVMV-----DDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNT 95 K V V + I D G + F + AD VLV Sbjct: 269 QEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGE- 327 Query: 96 FKTLDSWRDEFLIQASPRDPENFP-FVVLGNKIDLE------------NRQVATKRAQAW 142 F+T + A +VL NK+D ++ + Sbjct: 328 FETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVG 387 Query: 143 CYSKNNIPYFETSAKEAINVEQ 164 K +I + S N+++ Sbjct: 388 FNPKKDIHFMPCSGLTGANLKE 409 >5G06-P nrPDB Length = 747 Score = 36.4 bits (83), Expect = 0.010, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 75/225 (33%), Gaps = 54/225 (24%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNK-------------KFSNQYKA------------- 39 + L + LGD+ GK++L+ + K S+ Sbjct: 265 PLNLTCLFLGDTNAGKSTLLGHLLYDLNEISMSSMRELQKKSSNLDPSSSNSFKVILDNT 324 Query: 40 ----TIGADFLTKEVMVDDRLV----TMQIWDTAGQERF---QSLGVAFYRGADCCVLVF 88 G K + V++ L+ T+ + DT G ++ ++L + VLV Sbjct: 325 KTERENGFSMFKKVIQVENDLLPPSSTLTLIDTPGSIKYFNKETLNSILTFDPEVYVLVI 384 Query: 89 D---VTAPNTFKTLDSWRDEFLIQASPRDPENFP---FVVLGNKIDL----ENRQVATKR 138 D + + ++ E L S + + ++L NK DL ++R + Sbjct: 385 DCNYDSWEKSLDGPNNQIYEILKVISYLNKNSACKKHLIILLNKADLISWDKHRLEMIQS 444 Query: 139 AQAWCYSKN------NIPYFETSAKEAINVEQAFQTIARNALKQE 177 + +N + S N+ + + I ++ K E Sbjct: 445 ELNYVLKENFQWTDAEFQFIPCSGLLGSNLNKT-ENITKSKYKSE 488 >2OHF-A nrPDB Length = 396 Score = 35.7 bits (81), Expect = 0.015, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 27/82 (32%), Gaps = 15/82 (18%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVT-- 58 + R LK+ I+G VGK++ N N + S + D V V D Sbjct: 15 IIGRFGTSLKIGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFL 74 Query: 59 -------------MQIWDTAGQ 67 + + D AG Sbjct: 75 CQYHKPASKIPAFLNVVDIAGL 96 >3J81-k nrPDB Length = 527 Score = 35.3 bits (80), Expect = 0.018, Method: Composition-based stats. Identities = 23/220 (10%), Positives = 57/220 (25%), Gaps = 49/220 (22%) Query: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKK---FSNQ-------------------YKATI 41 ++ + + +G GK++++ + F ++ + T Sbjct: 96 NRQATINIGTIGHVAHGKSTVVRAISGVQTVRFKDELERNITIKLGYANAKIYKCQEPTC 155 Query: 42 GADFLTKEVMVDDRLV----------------TMQIWDTAGQERFQSLGVAFYRGADCCV 85 + D + + D G + S ++ D + Sbjct: 156 PEPDCYRSFKSDKEISPKCQRPGCPGRYKLVRHVSFVDCPGHDILMSTMLSGAAVMDAAL 215 Query: 86 LVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYS 145 L+ I ++L NK+DL + A + ++ Sbjct: 216 LLIAGNESCPQPQTSEHLAAIEIMKLKH------VIILQNKVDLMREESALEHQKSILKF 269 Query: 146 KN-----NIPYFETSAKEAINVEQAFQTIARNALKQETEV 180 P SA+ N++ + I + + Sbjct: 270 IRGTIADGAPIVPISAQLKYNIDAVNEFIVKTIPVPPRDF 309 >3EC1-A nrPDB Length = 369 Score = 35.3 bits (80), Expect = 0.019, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 6/66 (9%) Query: 112 PRDPENFPFVVLGNKIDLENRQVATKR----AQAWCYSKNNIP--YFETSAKEAINVEQA 165 PR + P +++GNK DL R V + + P SA + I + + Sbjct: 93 PRFAADNPILLVGNKADLLPRSVKYPKLLRWMRRMAEELGLCPVDVCLVSAAKGIGMAKV 152 Query: 166 FQTIAR 171 + I R Sbjct: 153 MEAINR 158 Score = 30.3 bits (67), Expect = 0.63, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 11/62 (17%) Query: 11 VIILGDSGVGKTSLMNQYV------NKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDT 64 V ++G + VGK++ +N+ + + Y D + + ++DT Sbjct: 165 VYVVGCTNVGKSTFINRIIEEATGKGNVITTSYFPGTTLDMIEIPLESGAT-----LYDT 219 Query: 65 AG 66 G Sbjct: 220 PG 221 >4D61-i nrPDB Length = 426 Score = 35.3 bits (80), Expect = 0.019, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 57/198 (28%), Gaps = 43/198 (21%) Query: 9 LKVIILGDSGVGKTSLMNQY------VNKKFSNQYKATIGADFLT--------------- 47 + V+ +G GK+++ Q V+K+ +Y+ Sbjct: 4 VNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEER 63 Query: 48 ---KEVMV-----DDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTL 99 K V V + I D G + F + AD VLV F+T Sbjct: 64 DKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGE-FETG 122 Query: 100 DSWRDEFLIQASPRDPENFP-FVVLGNKIDLE------------NRQVATKRAQAWCYSK 146 + A +VL NK+D ++ + K Sbjct: 123 FEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPK 182 Query: 147 NNIPYFETSAKEAINVEQ 164 +I + S N+++ Sbjct: 183 KDIHFMPCSGLTGANLKE 200 >6BK7-A nrPDB Length = 407 Score = 35.3 bits (80), Expect = 0.020, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 40/134 (29%), Gaps = 24/134 (17%) Query: 11 VIILGDSGVGKTSLMNQ--YVNKKFSN--------------QYKATIGADFLTKEVMVDD 54 + I+ GKT+ + Y K + + G + Sbjct: 16 IGIMAHVDAGKTTTTERILYYTGKIHKIGETHEGASQMDWMEQEQERGITITSAATTAQW 75 Query: 55 RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD 114 + + I DT G F R D V V D + ++ + QA+ Sbjct: 76 KGYRVNIIDTPGHVDFTIEVQRSLRVLDGAVTVLD-----SQSGVEPQTETVWRQATEY- 129 Query: 115 PENFPFVVLGNKID 128 P +V NK+D Sbjct: 130 --KVPRIVFCNKMD 141 >6MIJ-A nrPDB Length = 396 Score = 34.9 bits (79), Expect = 0.022, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 32/140 (22%), Gaps = 23/140 (16%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVN------KKFSNQYKA--------TIGADFLTK 48 R K + V +G GKT+L + Y G T Sbjct: 7 ERNKPHVNVGTIGHVDHGKTTLTAAIATICAKTYGGEAKDYSQIDSAPEEKARGITINTS 66 Query: 49 EVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI 108 V D D G + + D +LV T + Sbjct: 67 HVEYDSPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGP--------MPQTRE 118 Query: 109 QASPRDPENFP-FVVLGNKI 127 P +V NK Sbjct: 119 HILLSRQVGVPYIIVFLNKC 138 >5EE0-A nrPDB Length = 395 Score = 34.9 bits (79), Expect = 0.023, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 43/151 (28%), Gaps = 27/151 (17%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVT---- 58 R LK+ I+G VGK++ N + D V V D Sbjct: 20 GRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQ 79 Query: 59 -----------MQIWDTAGQ-------ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLD 100 ++I D AG E + ++ R D V +D Sbjct: 80 LYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHID 139 Query: 101 SWRD---EFLIQASPRDPENFPFVVLGNKID 128 D + ++ F + NKID Sbjct: 140 DSVDPVRDLETIGEELRLKDIEF--VQNKID 168 >6N0I-A nrPDB Length = 706 Score = 34.9 bits (79), Expect = 0.023, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 23/73 (31%), Gaps = 8/73 (10%) Query: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDP 115 I DT G F R D V+VF ++ WR + Sbjct: 85 KYRFNIIDTPGHVDFTIEVERSLRVLDGAVVVFSGADGVEPQSETVWRQ--------ANK 136 Query: 116 ENFPFVVLGNKID 128 + P + NK+D Sbjct: 137 YHVPRLAYINKMD 149 >5TV2-A nrPDB Length = 405 Score = 34.9 bits (79), Expect = 0.023, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 8/81 (9%) Query: 48 KEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL 107 + + + + I DT G F R D V+VF ++ ++ WR Sbjct: 73 RGMEAQFQDHRVNIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVEPQSETVWRQ--- 129 Query: 108 IQASPRDPENFPFVVLGNKID 128 D + P +V NK+D Sbjct: 130 -----ADKYHVPRMVFVNKMD 145 >6NOT-A nrPDB Length = 707 Score = 34.9 bits (79), Expect = 0.025, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 37/126 (29%), Gaps = 24/126 (19%) Query: 19 VGKTSLMNQYVN--------KKFSN--------QYKATIGADFLTKEVMVDDRLVTMQIW 62 GKT+ + + + + + G + + + I Sbjct: 29 AGKTTTTERILYYTGKSHKIGEVHEGGATMDWMEQEQERGITITSAATTCRWQDKVINII 88 Query: 63 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 DT G F R D V VFD A ++ WR D N P + Sbjct: 89 DTPGHVDFTIEVERSLRVLDGAVAVFDGVAGVEPQSETVWRQ--------ADKYNVPRMC 140 Query: 123 LGNKID 128 NK+D Sbjct: 141 FVNKMD 146 >4U00-A nrPDB Length = 244 Score = 34.9 bits (79), Expect = 0.025, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 15/51 (29%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIG--ADFLTKEVMVDDRLVT 58 K++I+G SG GK++L+ TI DF EV+VD V Sbjct: 32 KLVIIGPSGSGKSTLIR-------------TINRLEDFQEGEVVVDGLSVK 69 >1MJ1-A nrPDB Length = 405 Score = 34.9 bits (79), Expect = 0.028, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 41/163 (25%), Gaps = 28/163 (17%) Query: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATI---------------GADFLTK 48 R K + V +G GKT+L + + G T Sbjct: 7 RTKRHVNVGTIGHVDHGKTTLTAALTYVAAAENRNVEVKDYGDIDKAREERARGITINTA 66 Query: 49 EVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTA---PNTFKTLDSWRDE 105 V + D G + + D +LV T + + R Sbjct: 67 HVEYETAKRHYSHVDCRGHADYIKNMITGAAQMDGAILVVSAADGRMRQTREHILLARQV 126 Query: 106 FLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNN 148 + VV NK+D+ + + + N Sbjct: 127 GVRY----------IVVFMNKVDMVDDRELLDLVEMEVRDLLN 159 >2WIC-A nrPDB Length = 267 Score = 34.5 bits (78), Expect = 0.030, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 65/207 (31%), Gaps = 28/207 (13%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG---- 66 V ++G+ GKT+L NQ + A + + D VT+ D G Sbjct: 6 VGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGIFATTDHQVTL--VDLPGTYSL 63 Query: 67 --------QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENF 118 + + AD + V D + + L Sbjct: 64 TTISSQTSLDEQIACHYILSGDADMLINVVDASN----------LERNLYLTLQLLELGI 113 Query: 119 PFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQET 178 P VV N +D+ +Q A P + +E IA + + + Sbjct: 114 PCVVALNMLDIAEKQQVRIDIDALAAR-LGCPVIPLVSTRGRGIEAL--KIALDRHQANS 170 Query: 179 EVELYNEFPEPIKLDKNERAKASAESC 205 ++EL +P+P+ + + A+ + Sbjct: 171 DLELV-HYPQPLLREADLLAQQMSAQI 196 >1H65-A nrPDB Length = 270 Score = 34.5 bits (78), Expect = 0.030, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 5/59 (8%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRL--VTMQIWDTAGQ 67 ++++G GVGK+S +N + ++ + + VMV T+ I DT G Sbjct: 42 ILVMGKGGVGKSSTVNSIIGERVVSISP---FQSEGPRPVMVSRSRAGFTLNIIDTPGL 97 >4V7D-BZ nrPDB Length = 711 Score = 34.5 bits (78), Expect = 0.031, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 22/74 (29%), Gaps = 8/74 (10%) Query: 55 RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD 114 + I DT G F R D V+V+ + + + + Sbjct: 79 EPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVY--------CAVGGVQPQSETVWRQAN 130 Query: 115 PENFPFVVLGNKID 128 P + NK+D Sbjct: 131 KYKVPRIAFVNKMD 144 >5NON-A nrPDB Length = 165 Score = 34.5 bits (78), Expect = 0.032, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 9/46 (19%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDR 55 K+ I+GD GVG T L +V +F ++Y K ++VD+ Sbjct: 51 KLEIIGDGGVG-TILDMTFVPGEFPHEY--------KEKFILVDNE 87 >2VNE-A nrPDB Length = 201 Score = 34.5 bits (78), Expect = 0.032, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 9/46 (19%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDR 55 K+ I+GD GVG T L +V +F ++Y K ++VD+ Sbjct: 67 KLEIIGDGGVG-TILDMTFVPGEFPHEY--------KEKFILVDNE 103 >4KV9-A nrPDB Length = 412 Score = 34.5 bits (78), Expect = 0.033, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 27/55 (49%) Query: 7 VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 61 + ++ +G++G+GK++L+ N+KF D K V D + +++ Sbjct: 40 FVFNILCVGETGIGKSTLLETLFNQKFDFSPSTHDLTDPKLKAVTYDLKEANVKL 94 >5W76-A nrPDB Length = 385 Score = 34.5 bits (78), Expect = 0.033, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 34/136 (25%), Gaps = 23/136 (16%) Query: 9 LKVIILGDSGVGKTSLMNQYV------NKKFSNQYKA--------TIGADFLTKEVMVDD 54 + + +G GKT+L + Y G T V + Sbjct: 5 VNIGTIGHVDHGKTTLTAAITKVLAEKGQAEFKAYDQIDKAPEEKERGITISTAHVEYET 64 Query: 55 RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD 114 D G + + D +LV + Sbjct: 65 ENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGP--------MPQTREHILLAR 116 Query: 115 PENFPFVVL-GNKIDL 129 P++V+ NK+D+ Sbjct: 117 QVGVPYIVVFLNKVDM 132 >3H2Y-A nrPDB Length = 368 Score = 34.5 bits (78), Expect = 0.035, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 28/90 (31%), Gaps = 13/90 (14%) Query: 86 LVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWC-- 143 LV + F SW +++GNK DL + V + + W Sbjct: 72 LVVKIVDIFDFN--GSWLPGLHRFVGNNK-----VLLVGNKADLIPKSVKHDKVKHWMRY 124 Query: 144 -YSKNNIP---YFETSAKEAINVEQAFQTI 169 + + F SA + + + I Sbjct: 125 SAKQLGLKPEDVFLISAAKGQGIAELADAI 154 Score = 30.7 bits (68), Expect = 0.42, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 10/62 (16%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATI------GADFLTKEVMVDDRLVTMQIWDT 64 V ++G + VGK++ +N+ + +FS++ + I G ++ +D+ ++DT Sbjct: 163 VYVVGCTNVGKSTFINRMIK-EFSDETENVITTSHFPGTTLDLIDIPLDEES---SLYDT 218 Query: 65 AG 66 G Sbjct: 219 PG 220 >6FT6-s nrPDB Length = 520 Score = 34.1 bits (77), Expect = 0.038, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 30/60 (50%), Gaps = 7/60 (11%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATI----GADFLTKEVMVDDRLVTMQIWDTAG 66 V ++G VGK+S++N + ++ + G +E+ +D++ ++I D+ G Sbjct: 283 VGVIGYPNVGKSSVINALLARRGGQSKACPVGNEAGVTTSLREIKIDNK---LKILDSPG 339 Score = 28.7 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 40/103 (38%), Gaps = 16/103 (15%) Query: 36 QYKATIGADFLTKEVMVDDRLVTMQIW--DTAGQERFQSLGVAF-------YRGADCCVL 86 +Y+ T D ++ +D + + D G+ + A+ +D + Sbjct: 122 EYEGTPSNDADVRDDELDVIDYNIDFYGEDVEGESELEKSRKAYDKIFKSVIDASDVILY 181 Query: 87 VFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 V D P + T +E ++Q+ + +++ NK+DL Sbjct: 182 VLDARDPES--TRSRKVEEAVLQSQGKR-----LILILNKVDL 217 >5DGX-A nrPDB Length = 256 Score = 34.1 bits (77), Expect = 0.041, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 67/169 (39%), Gaps = 20/169 (11%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGAD-FLTKEVMVDDRLVTMQIWDTAGQER 69 V +G SG GKT+L + +F Q++ I D T+E+ +++ + I + Sbjct: 47 VAFVGKSGSGKTTLTSIIS--RFYTQHEGEILLDGVDTRELTLENLRSHLSIV----SQN 100 Query: 70 FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN---K 126 Y + F ++ + + + ++ + +GN K Sbjct: 101 VHLFDDTVYNN-----IAFGLSREVSEEEVIDALKRANAYEFVQELSDGINTNIGNNGSK 155 Query: 127 IDLENRQVATKRAQAWCYSKNNIPYFE-TSAKEAIN---VEQAFQTIAR 171 + RQ + A+A + + + E TSA + + V+QA +++ + Sbjct: 156 LSGGQRQRISI-ARALLKNAPVLIFDEATSALDNESERVVQQALESLTK 203 >1NI3-A nrPDB Length = 392 Score = 34.1 bits (77), Expect = 0.045, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 14/90 (15%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 62 R LK I+G VGK++ F K+ +G +D + + Sbjct: 15 GRPGNNLKTGIVGMPNVGKSTF--------FRAITKSVLGNPANYPYATIDPEEAKVAVP 66 Query: 63 DTAGQERFQSLGVAFYRGAD--CCVLVFDV 90 D ERF L A+ + + VFD+ Sbjct: 67 D----ERFDWLCEAYKPKSRVPAFLTVFDI 92 >5VH6-A nrPDB Length = 409 Score = 34.1 bits (77), Expect = 0.048, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 38/134 (28%), Gaps = 24/134 (17%) Query: 11 VIILGDSGVGKTSLMNQ--YVNKKFSN--------------QYKATIGADFLTKEVMVDD 54 + I+ GKT+ + + + + + G + Sbjct: 16 IGIMAHIDAGKTTTTERILFYTGRIHKIGETHEGASQMDWMEQEQERGITITSAATTAQW 75 Query: 55 RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD 114 + + I DT G F R D V V D + +T WR Sbjct: 76 KGYRVNIIDTPGHVDFTVEVERSLRVLDGAVAVLDAQSGVEPQTETVWRQ--------AT 127 Query: 115 PENFPFVVLGNKID 128 P +V NK+D Sbjct: 128 TYGVPRIVFVNKMD 141 >1WDT-A nrPDB Length = 665 Score = 33.7 bits (76), Expect = 0.049, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 25/145 (17%) Query: 1 MTSRKKVLLK-VIILGDSGVGKTSLMNQYVNKKFSNQ-----YKATIGADF----LTKEV 50 M + +++ V ++G +G GKT+L + K + + + T D+ Sbjct: 1 MGTEGGAMIRTVALVGHAGSGKTTLTEALLYKTGAKERRGRVEEGTTTTDYTPEAKLHRT 60 Query: 51 MVDDRLVTMQ-------IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWR 103 V + + + D G F AD ++ A T +W Sbjct: 61 TVRTGVAPLLFRGHRVFLLDAPGYGDFVGEIRGALEAADAALVAVSAEAGVQVGTERAW- 119 Query: 104 DEFLIQASPRDPENFPFVVLGNKID 128 + + P +V+ K+D Sbjct: 120 -------TVAERLGLPRMVVVTKLD 137 >1ZCA-A nrPDB Length = 359 Score = 33.7 bits (76), Expect = 0.063, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 47/156 (30%), Gaps = 35/156 (22%) Query: 55 RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFD--------VTAPNTFKTLDSWRDEF 106 + + ++ D GQ + + G + + + T L + F Sbjct: 197 KKIPFKMVDVGGQRSQRQKWFQCFDGITSILFMVSSSEYDQVLMEDRRT-NRLVESMNIF 255 Query: 107 LIQASPRDPENFPFVVLGNKIDL--------------------ENRQVATKRAQAWCYSK 146 + + N ++ NK+DL +R +R C+ + Sbjct: 256 ETIVNNKLFFNVSIILFLNKMDLLVEKVKSVSIKKHFPDFKGDPHRLEDVQRYLVQCFDR 315 Query: 147 NNI----PYFE--TSAKEAINVEQAFQTIARNALKQ 176 P F T+A + N+ F + L++ Sbjct: 316 KRRNRSKPLFHHFTTAIDTENIRFVFHAVKDTILQE 351 Score = 31.0 bits (69), Expect = 0.35, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 8/56 (14%) Query: 8 LLKVIILGDSGVGKTSLMNQ---YVNKKFSN----QYKATIGADFLT-KEVMVDDR 55 L+K+++LG GK++ + Q ++F +++ TI + L V+VD R Sbjct: 35 LVKILLLGAGESGKSTFLKQMRIIHGREFDQKALLEFRDTIFDNILKGSRVLVDAR 90 >4QJ3-A nrPDB Length = 379 Score = 33.7 bits (76), Expect = 0.063, Method: Composition-based stats. Identities = 19/156 (12%), Positives = 46/156 (29%), Gaps = 33/156 (21%) Query: 53 DDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLV-----FD--VTAPNTFKTLDSWRDE 105 D + V ++ D GQ + + + + + +D + + ++ + Sbjct: 215 DLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKAL 274 Query: 106 FLIQASPRDPENFPFVVLGNKIDLENRQVATK------------RAQAWCYSKNNIPYF- 152 F + +N ++ NK DL ++ + A + + F Sbjct: 275 FRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFV 334 Query: 153 -------------ETSAKEAINVEQAFQTIARNALK 175 T A + N+ F + L+ Sbjct: 335 DLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQ 370 Score = 28.0 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 13/19 (68%) Query: 9 LKVIILGDSGVGKTSLMNQ 27 LK+++LG GK++ + Q Sbjct: 60 LKLLLLGTGESGKSTFIKQ 78 >3DEF-A nrPDB Length = 262 Score = 33.3 bits (75), Expect = 0.066, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 5/59 (8%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRL--VTMQIWDTAGQ 67 V++LG GVGK+S +N + ++ + VMV + T+ I DT G Sbjct: 39 VLVLGKGGVGKSSTVNSLIGEQVVRVSP---FQAEGLRPVMVSRTMGGFTINIIDTPGL 94 >2BCJ-Q nrPDB Length = 353 Score = 33.3 bits (75), Expect = 0.069, Method: Composition-based stats. Identities = 19/156 (12%), Positives = 46/156 (29%), Gaps = 33/156 (21%) Query: 53 DDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLV-----FD--VTAPNTFKTLDSWRDE 105 D + V ++ D GQ + + + + + +D + + ++ + Sbjct: 189 DLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKAL 248 Query: 106 FLIQASPRDPENFPFVVLGNKIDLENRQVATK------------RAQAWCYSKNNIPYF- 152 F + +N ++ NK DL ++ + A + + F Sbjct: 249 FRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFV 308 Query: 153 -------------ETSAKEAINVEQAFQTIARNALK 175 T A + N+ F + L+ Sbjct: 309 DLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQ 344 Score = 29.1 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 15/26 (57%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQ 27 R + LK+++LG GK++ + Q Sbjct: 27 GERSRRELKLLLLGTGESGKSTFIKQ 52 >3VQT-A nrPDB Length = 548 Score = 33.3 bits (75), Expect = 0.074, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 36/139 (25%), Gaps = 32/139 (23%) Query: 12 IILGDSGVGKTSLMNQY----------------------VNKKFSNQYKATIGADFLTKE 49 I+ GKT+L + + + + + I + Sbjct: 35 AIISHPDAGKTTLTEKLLLFGGAIQMAGSVKARKAARHATSDWMAMERERGISVTTSVMQ 94 Query: 50 VMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQ 109 DR+V + DT G + F D ++V D + Sbjct: 95 FPYRDRVVNL--LDTPGHQDFSEDTYRVLTAVDSALVVID--------AAKGVEAQTRKL 144 Query: 110 ASPRDPENFPFVVLGNKID 128 P + NK+D Sbjct: 145 MDVCRMRATPVMTFVNKMD 163 >1IY1-A nrPDB Length = 254 Score = 33.3 bits (75), Expect = 0.077, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65 V+++G GVGKT L + + G+DF+ V V V +++TA Sbjct: 52 VLLVGPPGVGKTHLARAVAGEARVP-FITASGSDFVEMFVGVGAARVR-DLFETA 104 >4YMS-J nrPDB Length = 240 Score = 33.0 bits (74), Expect = 0.083, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 6/50 (12%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60 V+I+G SG GK++L+ + + T G F+ V +++ V + Sbjct: 30 VVIIGPSGSGKSTLLRCI-----NLLEEPTKGEVFID-GVKINNGKVNIN 73 >6HZK-A nrPDB Length = 333 Score = 33.0 bits (74), Expect = 0.088, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 18/29 (62%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVN 30 S+ ++ + + GDSG GK++ +N+ + Sbjct: 1 MSKPDRVVLIGVAGDSGCGKSTFLNRLAD 29 >2DHR-A nrPDB Length = 499 Score = 33.0 bits (74), Expect = 0.090, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65 V+++G GVGKT L + + G+DF+ V V V +++TA Sbjct: 67 VLLVGPPGVGKTHLARAVAGEARVP-FITASGSDFVEMFVGVGAARVR-DLFETA 119 >1YE8-A nrPDB Length = 178 Score = 33.0 bits (74), Expect = 0.094, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 17/22 (77%) Query: 9 LKVIILGDSGVGKTSLMNQYVN 30 +K+II G+ GVGKT+L+ + V Sbjct: 1 MKIIITGEPGVGKTTLVKKIVE 22 >6OIJ-A nrPDB Length = 353 Score = 33.0 bits (74), Expect = 0.094, Method: Composition-based stats. Identities = 18/156 (11%), Positives = 45/156 (28%), Gaps = 33/156 (21%) Query: 53 DDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLV-----FD--VTAPNTFKTLDSWRDE 105 D + ++ D GQ + + + + + +D + + ++ + Sbjct: 189 DLENIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKAL 248 Query: 106 FLIQASPRDPENFPFVVLGNKIDLENRQVATK------------RAQAWCYSKNNIPYF- 152 F + +N ++ NK DL ++ + A + + F Sbjct: 249 FRTIITYPWFQNSSVILFLNKKDLLEDKILYSHLVDYFPEFDGPQRDAQAAREFILKMFV 308 Query: 153 -------------ETSAKEAINVEQAFQTIARNALK 175 T A + N+ F + L+ Sbjct: 309 DLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQ 344 Score = 28.0 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 13/19 (68%) Query: 9 LKVIILGDSGVGKTSLMNQ 27 LK+++LG GK++ + Q Sbjct: 34 LKLLLLGTGESGKSTFIKQ 52 >6G12-A nrPDB Length = 301 Score = 33.0 bits (74), Expect = 0.10, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDT 64 K ++ +I+G VGK++L+N+ + + G + + V + +Q+ DT Sbjct: 124 KPRAIRAMIVGIPNVGKSTLINKLAKRSIAQTGNKP-GVTKQQQWIKVGNA---LQLLDT 179 Query: 65 AG 66 G Sbjct: 180 PG 181 Score = 27.2 bits (59), Expect = 5.3, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 6/75 (8%) Query: 119 PFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETS--AKEAINVEQAFQTIARNALKQ 176 P VV+ NK D+ N W + Y+ S AK N+++ + ++ Sbjct: 59 PRVVILNKKDMSN----LNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEK 114 Query: 177 ETEVELYNEFPEPIK 191 + P I+ Sbjct: 115 FEREKAKGLKPRAIR 129 >1JAL-A nrPDB Length = 363 Score = 33.0 bits (74), Expect = 0.10, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 24/74 (32%), Gaps = 15/74 (20%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKA--TIGADFLTKEV----------MVDDRL 56 K I+G VGK++L N TI + + +V Sbjct: 3 FKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPER 62 Query: 57 V---TMQIWDTAGQ 67 + TM+ D AG Sbjct: 63 ILPTTMEFVDIAGL 76 >1WXQ-A nrPDB Length = 397 Score = 32.6 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 3/70 (4%) Query: 97 KTLDSW-RDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETS 155 + W +D+ L AS N P V+ NK D + + + + K TS Sbjct: 193 EDPTKWSQDDLLAFASEIRRVNKPMVIAANKADAASDEQIKRLVREE--EKRGYIVIPTS 250 Query: 156 AKEAINVEQA 165 A + + +A Sbjct: 251 AAAELTLRKA 260 >5IDV-A nrPDB Length = 279 Score = 32.6 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGAD 44 V ++G SG GKTSL+N V +F I D Sbjct: 68 VALVGRSGAGKTSLVNMLV--RFQEVSSGQIYLD 99 >4LV5-B nrPDB Length = 423 Score = 32.6 bits (73), Expect = 0.13, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 2/63 (3%) Query: 6 KVLLKVIILGDSGVGKTSLMNQY--VNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63 +L V + G++G GK+S +N + + K + + + + + WD Sbjct: 77 SSVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWD 136 Query: 64 TAG 66 G Sbjct: 137 LPG 139 >4FN5-A nrPDB Length = 709 Score = 32.6 bits (73), Expect = 0.13, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 8/72 (11%) Query: 57 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPE 116 + + DT G F R D V+VF T+ ++ WR + Sbjct: 85 YRVNVIDTPGHVDFTIEVERSLRVLDGAVVVFCGTSGVEPQSETVWRQ--------ANKY 136 Query: 117 NFPFVVLGNKID 128 P +V NK+D Sbjct: 137 GVPRIVYVNKMD 148 >6HA8-V nrPDB Length = 548 Score = 32.2 bits (72), Expect = 0.14, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 17/23 (73%) Query: 10 KVIILGDSGVGKTSLMNQYVNKK 32 KV I+G +G GKT+L+N + ++ Sbjct: 325 KVAIIGPNGSGKTTLLNIILGQE 347 >2OUK-A nrPDB Length = 263 Score = 32.2 bits (72), Expect = 0.14, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 11 VIILGDSGVGKTSLMNQY-VNKKFSNQYKATIGADFLTKEVMVD 53 V+++G SG GK++ + + + F G + K+ ++ Sbjct: 53 VVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKAKDTNLN 96 >4Z8X-A nrPDB Length = 497 Score = 32.2 bits (72), Expect = 0.15, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65 V++ G+ GVGKT L + + + G+DF+ V V V +++TA Sbjct: 54 VLLYGEPGVGKTLLAKAIAGEAHVP-FISVSGSDFVEMFVGVGAARVR-DLFETA 106 >3V70-A nrPDB Length = 247 Score = 32.2 bits (72), Expect = 0.16, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 35/82 (42%), Gaps = 8/82 (9%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRL---VTMQIWDTAG 66 ++I++G +G GK++ N + ++ ++ + +GA +T+ R +++ DT Sbjct: 23 RLILVGRTGAGKSATGNSILGQR---RFFSRLGATSVTRACTTGSRRWDKCHVEVVDTPD 79 Query: 67 --QERFQSLGVAFYRGADCCVL 86 + C +L Sbjct: 80 IFSSQVSKTDPGCEERGHCYLL 101 >5NKM-B nrPDB Length = 317 Score = 32.2 bits (72), Expect = 0.17, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 66/222 (29%), Gaps = 54/222 (24%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQY-----------------KATIGADFL--TKEVM 51 + +G G GK++L++ Y TI D ++ Sbjct: 31 ISAIGPQGAGKSTLLSMLAGNNSRQMYREYVFRPVSREANEQSRHQTIQIDIYIVNHQIF 90 Query: 52 VDDRL-VTMQIWDTAGQERFQ--------------SLGVAFYRGADCCVLV----FDVTA 92 +D + + I + G + + L + ++V +D Sbjct: 91 LDCQPMYSFSIME--GLPKVRGGRFDDSTAMSDTLRLTAFLLYVSHTVLVVSETHYDKVI 148 Query: 93 PNTFKTLDSWRDEFLIQASPRDPE-NFPFVVLGNK---IDLENRQVATKRAQAWCYSKNN 148 +T + + R I + V + K IDL V +R + S + Sbjct: 149 IDTLRVAEQIRPYLAIFRPKLAIDRKTNLVFIKTKASSIDLA-PTVIREREELLRLSFQD 207 Query: 149 IPYFETSAKEAINVEQAFQTIA--RNALKQETEVELYNEFPE 188 + + S ++ F+T+ + + + P+ Sbjct: 208 SRWLKVS-------QEPFKTLIVLEEIRVRREHLFEEGDEPD 242 >2YYZ-A nrPDB Length = 359 Score = 31.8 bits (71), Expect = 0.20, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 5/43 (11%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD 53 V +LG SG GKT+ + YK T G + ++ D Sbjct: 32 VALLGPSGCGKTTTLLMLAG-----IYKPTSGEIYFDDVLVND 69 >3GD7-A nrPDB Length = 390 Score = 31.8 bits (71), Expect = 0.22, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 36/115 (31%), Gaps = 30/115 (26%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69 +V +LG +G GK++L++ ++ + E+ +D WD Sbjct: 49 RVGLLGRTGSGKSTLLSAFLRLLNTEG------------EIQIDGVS-----WD------ 85 Query: 70 FQSLGVAFYRGADCCV----LVFDVTAPNTFK-TLDSWRDEFLIQASPRDPENFP 119 S+ + +R A + +F T E A + Sbjct: 86 --SITLEQWRKAFGVIPQKVFIFSGTFRKNLDPNAAHSDQEIWKVADEVGLRSVI 138 >6B8D-A nrPDB Length = 408 Score = 31.8 bits (71), Expect = 0.23, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 22/73 (30%), Gaps = 8/73 (10%) Query: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDP 115 + + DT G F R D V+V+ + + + + Sbjct: 84 QHRINVIDTPGHVDFTVEVERSMRVLDGAVMVY--------CAVGGVQPQSETVWRQANK 135 Query: 116 ENFPFVVLGNKID 128 P + NK+D Sbjct: 136 YEVPRIAFVNKMD 148 >3ZZ0-A nrPDB Length = 693 Score = 31.8 bits (71), Expect = 0.23, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 23/74 (31%), Gaps = 8/74 (10%) Query: 55 RLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD 114 + I DT G F R D V V D + +T WR Sbjct: 73 EGHRVNIIDTPGHVDFTVEVERSLRVLDGAVTVLDAQSGVEPQTETVWRQ--------AT 124 Query: 115 PENFPFVVLGNKID 128 P +V NK+D Sbjct: 125 TYGVPRIVFVNKMD 138 >2HDN-B nrPDB Length = 335 Score = 31.4 bits (70), Expect = 0.25, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 21/89 (23%), Gaps = 9/89 (10%) Query: 42 GADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDS 101 G T V D D G + + D +LV T Sbjct: 1 GITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGP------- 53 Query: 102 WRDEFLIQASPRDPENFP-FVVLGNKIDL 129 + P +V NK D+ Sbjct: 54 -MPQTREHILLGRQVGVPYIIVFLNKCDM 81 >4FIN-A nrPDB Length = 555 Score = 31.4 bits (70), Expect = 0.25, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 18/40 (45%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEV 50 V I+G +G GK++L ++ + T+G V Sbjct: 352 VGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASV 391 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 13/16 (81%) Query: 10 KVIILGDSGVGKTSLM 25 K+ +LG +G GK++L+ Sbjct: 34 KIGVLGLNGAGKSTLL 49 >5OCH-A nrPDB Length = 612 Score = 31.4 bits (70), Expect = 0.25, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 31/79 (39%) Query: 11 VIILGDSGVGKT---SLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67 V ++G SG GKT SL+ ++ Y T G VM+D R Sbjct: 394 VALVGQSGGGKTTVASLLERF--------YDPTAGV------VMLDGR------------ 427 Query: 68 ERFQSLGVAFYRG-ADCCV 85 ++L ++ RG + Sbjct: 428 -DLRTLDPSWLRGQVVGFI 445 >2YV5-A nrPDB Length = 302 Score = 31.4 bits (70), Expect = 0.25, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 18/29 (62%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKA 39 I+ G SGVGK+S++++ ++ Q + Sbjct: 168 CILAGPSGVGKSSILSRLTGEELRTQEVS 196 Score = 26.8 bits (58), Expect = 6.6, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%) Query: 121 VVLGNKIDLENRQVATKRAQ-AWCYSKNNIPYFETSAKEAINVEQAFQTI 169 V++ NKIDL N + + + Y + SAK +++ + Sbjct: 114 VIVFNKIDLLNEEEKKELERWISIYRDAGYDVLKVSAKTGEGIDELVDYL 163 >2PJZ-A nrPDB Length = 263 Score = 31.4 bits (70), Expect = 0.27, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 16/61 (26%) Query: 10 KVIILGDSGVGKTSLMNQ------YVNKKFSNQYK----------ATIGADFLTKEVMVD 53 KVIILG +G GKT+L+ Y F N + +T + V V+ Sbjct: 32 KVIILGPNGSGKTTLLRAISGLLPYSGNIFINGMEVRKIRNYIRYSTNLPEAYEIGVTVN 91 Query: 54 D 54 D Sbjct: 92 D 92 >3B5X-A nrPDB Length = 582 Score = 31.4 bits (70), Expect = 0.28, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 11/48 (22%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVT 58 V ++G SG GK+++ N + T D + + +D V Sbjct: 372 VALVGRSGSGKSTIANLF-----------TRFYDVDSGSICLDGHDVR 408 >3TK1-A nrPDB Length = 330 Score = 31.4 bits (70), Expect = 0.30, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 11/79 (13%) Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFET---------SAKEAINVEQAFQTIA- 170 +V+ NK D E+ A K A+ + I ET SA E V + ++T+ Sbjct: 198 IVVVNKADGEHAVEARKAARELAGAMRLIYPRETLWRPPVLTMSALEGTGVAELWETVLK 257 Query: 171 -RNALKQETEVELYNEFPE 188 R L E E E Sbjct: 258 HRQVLIDAGEFEKRRRDQE 276 >4MKI-B nrPDB Length = 298 Score = 31.4 bits (70), Expect = 0.31, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Query: 11 VIILGDSGVGKTSLMNQYVN-KKFSNQYKATIGADFLTKEVMVDD 54 V I+G +G GK++L+ Q K S G D K+V + D Sbjct: 40 VGIIGHTGSGKSTLIQQLNGLLKPSKGKIYINGIDITDKKVSLKD 84 >2QAG-B nrPDB Length = 427 Score = 31.0 bits (69), Expect = 0.32, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQ----YKATIGADFLTKEVMVDDRLVTMQIWDT 64 ++ +G++G+GK++LM+ N KF + + + T ++ + + + I T Sbjct: 43 FNILCVGETGLGKSTLMDTLFNTKFEGEPATHTQPGVQLQSNTYDLQESNVRLKLTIVST 102 Query: 65 AG 66 G Sbjct: 103 VG 104 >1QZX-A nrPDB Length = 440 Score = 31.0 bits (69), Expect = 0.33, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 52/142 (36%), Gaps = 18/142 (12%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-----DRLVTMQ 60 K+ ++++G G GKT+ + YK + A + + D + +Q Sbjct: 102 KLPFIIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYRPAAYDQLLQLGNQIGVQ 161 Query: 61 IWDTAGQERFQSLGVAFYRGADCC------VLVFDVTAPNTFKTLDSWRDEFLIQASPRD 114 ++ G+ Q+ +G D +++ D + + +E Sbjct: 162 VY---GEPNNQNPIEIAKKGVDIFVKNKMDIIIVDTAGRHGYGEETKLLEEMKEMYDVLK 218 Query: 115 PENFPFVV---LGNKI-DLENR 132 P++ V+ +G K DL +R Sbjct: 219 PDDVILVIDASIGQKAYDLASR 240 >3ZJC-A nrPDB Length = 305 Score = 31.0 bits (69), Expect = 0.34, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 6/70 (8%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVT-- 58 M + L+++++G +G GK++ N + ++ + + I A +TK R Sbjct: 6 MAESEDRSLRIVLVGKTGSGKSATANTILGEEI---FDSRIAAQAVTKNCQKASREWQGR 62 Query: 59 -MQIWDTAGQ 67 + + DT G Sbjct: 63 DLLVVDTPGL 72 >6C2V-A nrPDB Length = 115 Score = 31.0 bits (69), Expect = 0.36, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Query: 11 VIILGDSGVGKTSL--MNQYVNKKFSNQYKATI 41 V+I+G SG GKT+L + + ++ + T+ Sbjct: 5 VVIVGPSGAGKTTLDELARKAKEEVPDAEIRTV 37 Score = 27.2 bits (59), Expect = 4.6, Method: Composition-based stats. Identities = 8/16 (50%), Positives = 12/16 (75%) Query: 11 VIILGDSGVGKTSLMN 26 V+I+G SG GK++L Sbjct: 58 VVIVGPSGSGKSTLAK 73 >5B3F-A nrPDB Length = 343 Score = 31.0 bits (69), Expect = 0.38, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFL 46 ++ + + GDSG GK++ + ++ F + ++I D Sbjct: 35 PLVYLIGVAGDSGSGKSTFT-RAISDIFGEELVSSITVDDY 74 >5JSZ-B nrPDB Length = 287 Score = 31.0 bits (69), Expect = 0.39, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 5/32 (15%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIG 42 + ++G +G GK++LM + F+ K T G Sbjct: 36 IALVGHTGSGKSTLM-----QHFNALLKPTSG 62 >5C78-A nrPDB Length = 564 Score = 31.0 bits (69), Expect = 0.39, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 15/21 (71%) Query: 10 KVIILGDSGVGKTSLMNQYVN 30 K+ +G+SG GK++L++ + Sbjct: 377 KIAFIGESGCGKSTLVDLIIG 397 >4N1A-A nrPDB Length = 589 Score = 30.7 bits (68), Expect = 0.41, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 28/126 (22%) Query: 12 IILGDSGVGKTSLMNQYVNK---KFSNQYKATIGADFLTKEVMVDDRLVTMQ-------- 60 ++ GD+ GK++L+ +++ Q I D+ + V + Sbjct: 387 LVFGDTECGKSNLLRLITAGIIERYTPQQARLIFIDYSRSLLDVATTEHQIGYAASSTAA 446 Query: 61 ---IWDTAG------------QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDE 105 + D G E+ +S +++ GA+ ++V D T E Sbjct: 447 SSLVRDIKGAMEARLPPPDLTPEQLRS--RSWWTGAELFLVVDDYEMVATSDNPLRPLAE 504 Query: 106 FLIQAS 111 L QA Sbjct: 505 LLPQAR 510 >4MYH-A nrPDB Length = 598 Score = 30.7 bits (68), Expect = 0.42, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 17/52 (32%) Query: 10 KVIILGDSGVGKTS---LMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVT 58 K I+G SG GK++ L+ ++ Y G ++++ R + Sbjct: 367 KTAIVGSSGSGKSTILKLVFRF--------YDPESG------RILINGRDIK 404 >5L3S-A nrPDB Length = 298 Score = 30.7 bits (68), Expect = 0.43, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 52/142 (36%), Gaps = 18/142 (12%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-----DRLVTMQ 60 K+ ++++G G GKT+ + YK + A + + D + +Q Sbjct: 100 KLPFIIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYRPAAYDQLLQLGNQIGVQ 159 Query: 61 IWDTAGQERFQSLGVAFYRGADCC------VLVFDVTAPNTFKTLDSWRDEFLIQASPRD 114 ++ G+ Q+ +G D +++ D + + +E Sbjct: 160 VY---GEPNNQNPIEIAKKGVDIFVKNKMDIIIVDTAGRHGYGEETKLLEEMKEMYDVLK 216 Query: 115 PENFPFVV---LGNKI-DLENR 132 P++ V+ +G K DL +R Sbjct: 217 PDDVILVIDASIGQKAYDLASR 238 >2NQL-A nrPDB Length = 388 Score = 30.7 bits (68), Expect = 0.46, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 13/26 (50%) Query: 59 MQIWDTAGQERFQSLGVAFYRGADCC 84 + +WD AGQE +S+ G D Sbjct: 128 IALWDIAGQEAGKSIRDLLGGGVDSF 153 >2I3B-A nrPDB Length = 189 Score = 30.7 bits (68), Expect = 0.46, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 12/94 (12%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGAD-FLTKEVMVDDRLVTMQIWDTAG--- 66 V + G GVGKT+L+++ S+ + D F T+EV R + + +G Sbjct: 4 VFLTGPPGVGKTTLIHKASEVLKSSG----VPVDGFYTEEVRQGGRRIGFDVVTLSGTRG 59 Query: 67 -QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTL 99 R R V D+T +F+ L Sbjct: 60 PLSRVGLEPPPGKRECRVGQYVVDLT---SFEQL 90 >2IW3-A nrPDB Length = 986 Score = 30.7 bits (68), Expect = 0.46, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 18/36 (50%), Gaps = 5/36 (13%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADF 45 ++ ++G +G GK++L+N + T G + Sbjct: 701 RIAVIGPNGAGKSTLINVLTG-----ELLPTSGEVY 731 >4MRS-A nrPDB Length = 614 Score = 30.7 bits (68), Expect = 0.47, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 17/51 (33%) Query: 10 KVIILGDSGVGKTS---LMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLV 57 +V I+G SG GK++ L+ ++ Y G +++D + + Sbjct: 389 RVAIVGPSGAGKSTIARLLFRF--------YDPWEG------RILIDGQDI 425 >2IT1-A nrPDB Length = 362 Score = 30.7 bits (68), Expect = 0.51, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 6/41 (14%) Query: 12 IILGDSGVGKTSLMNQYVNKKFSNQYKATIG-ADFLTKEVM 51 +LG SG GK++L+ YK T G F K+V Sbjct: 33 ALLGPSGSGKSTLLYTIAG-----IYKPTSGKIYFDEKDVT 68 >5ZLU-EE nrPDB Length = 497 Score = 30.3 bits (67), Expect = 0.55, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 15/91 (16%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFL---------TKEVMVDDRLVTMQ 60 ++ ++GD+G GK+SL+ + + DF + V L + Sbjct: 32 RIGLVGDNGAGKSSLLKVLNGEIVLAEATLQRFGDFAHISQLGGIEIETVEDRAMLSRLG 91 Query: 61 IW----DT--AGQERFQSLGVAFYRGADCCV 85 + DT G+E + AF + + Sbjct: 92 VSNVQNDTMSGGEETRAKIAAAFSQQVHGIL 122 Score = 28.7 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 16/40 (40%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE 49 KV I G +G GKTSL+ + + T+ Sbjct: 324 KVAITGSNGTGKTSLLKMISERADGLTISPKAEIGYFTQT 363 >5OWV-A nrPDB Length = 732 Score = 30.3 bits (67), Expect = 0.57, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 3/60 (5%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTMQIWD 63 + + + I G GK+SL+N + + F + I + + WD Sbjct: 159 QNLEFNIAITGVMNAGKSSLLNALLKEDFLG--VSNIPETANLTVLSYGKSEEAKIYFWD 216 >6QUZ-B nrPDB Length = 599 Score = 30.3 bits (67), Expect = 0.59, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 11/49 (22%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVT 58 KV ++G +G GKT+++N + D +++VD + Sbjct: 383 KVALVGPTGSGKTTIVNLLMR-----------FYDVDRGQILVDGIDIR 420 >1YR7-A nrPDB Length = 262 Score = 30.3 bits (67), Expect = 0.59, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 48/143 (33%), Gaps = 25/143 (17%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERF 70 V+ +G +G GKT+L ++ N A + D KE+ ++ + + E Sbjct: 17 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDTGVKELPY---EPSIDVREFVTVEEI 73 Query: 71 QSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLE 130 + + ++ L +E+L + + EN + ID Sbjct: 74 --MREGYGPNGAIV---------ESYDRLMEKFNEYLNKILRLEKENDYVL-----IDTP 117 Query: 131 NRQVATKRAQAWCYSKNNIPYFE 153 + + + + + + E Sbjct: 118 G------QMETFLFHEFGVRLME 134 >5B57-C nrPDB Length = 273 Score = 30.3 bits (67), Expect = 0.60, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 3/45 (6%) Query: 12 IILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRL 56 +LG +G GK++L+ + + A G T +V ++ Sbjct: 31 ALLGRNGAGKSTLLKTFAGE--LTGSVAPHGVRV-TGDVTLNGEP 72 >3R7W-B nrPDB Length = 331 Score = 30.3 bits (67), Expect = 0.61, Method: Composition-based stats. Identities = 26/181 (14%), Positives = 66/181 (36%), Gaps = 26/181 (14%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE-VMVDDRLVTMQIWDTAGQ-- 67 V+++G GK+S+ + T+ + + + L+ + + + GQ Sbjct: 2 VLLMGVRRCGKSSICKVVFHNMQPLD---TLYLESTSNPSLEHFSTLIDLAVMELPGQLN 58 Query: 68 ---ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLG 124 + S + GA LV+ + + + + + + A +P + VL Sbjct: 59 YFEPSYDSERLFKSVGA----LVYVIDSQDEYINAITNLAMIIEYAYKVNP-SINIEVLI 113 Query: 125 NKID--------LENRQVATKRAQAWCYSKNN---IPYFETSAKEAINVEQAFQTIARNA 173 +K+D R + + + + + ++ TS + ++ +AF I + Sbjct: 114 HKVDGLSEDFKVDAQRDIMQRTGEELLELGLDGVQVSFYLTSIFD-HSIYEAFSRIVQKL 172 Query: 174 L 174 + Sbjct: 173 I 173 >3FVQ-A nrPDB Length = 359 Score = 30.3 bits (67), Expect = 0.63, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 14/26 (53%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQ 36 + I+G SG GKT+L+ + + Sbjct: 33 LFIIGASGCGKTTLLRCLAGFEQPDS 58 >2R65-A nrPDB Length = 268 Score = 30.3 bits (67), Expect = 0.70, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 20/122 (16%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ--- 67 V+++G G GKT L + + G+ F+ V + V +++TA + Sbjct: 47 VLLVGPPGTGKTLLAKAVAGEAHVPFFSMG-GSSFIEMFVGLGASRVR-DLFETAKKQAP 104 Query: 68 -----ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 + ++G + G V + ++ L + EN P +V Sbjct: 105 SIIFIDEIDAIGKSRAAGG-----VVSGNDER-----EQTLNQLLAEMDGFGSENAPVIV 154 Query: 123 LG 124 L Sbjct: 155 LA 156 >2FGK-A nrPDB Length = 247 Score = 30.3 bits (67), Expect = 0.70, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 11/49 (22%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTM 59 + I+G SG GK++L + ++F Y G +V++D + + Sbjct: 38 IGIVGRSGSGKSTLTK--LIQRF---YIPENG------QVLIDGHDLAL 75 >1R6B-X nrPDB Length = 758 Score = 29.9 bits (66), Expect = 0.72, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 5/35 (14%) Query: 12 IILGDSGVGKTS----LMNQYVNKKFSNQY-KATI 41 +++G+SGVGKT+ L + V TI Sbjct: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTI 245 >3PV0-A nrPDB Length = 381 Score = 29.9 bits (66), Expect = 0.75, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 15/33 (45%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGA 43 V+ +G SG GK++L+ + IG Sbjct: 32 VVFVGPSGCGKSTLLRMIAGLETITSGDLFIGE 64 >5OFO-C nrPDB Length = 871 Score = 29.9 bits (66), Expect = 0.77, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 16/28 (57%), Gaps = 4/28 (14%) Query: 12 IILGDSGVGKTS----LMNQYVNKKFSN 35 +++G+ GVGKT+ L + +N + Sbjct: 207 VLIGEPGVGKTAIVEGLAQRIINGEVPE 234 >1LV7-A nrPDB Length = 257 Score = 29.9 bits (66), Expect = 0.81, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATI-GADFLTKEVMVDDRLVT 58 V+++G G GKT L + + TI G+DF+ V V V Sbjct: 48 VLMVGPPGTGKTLLAKAIAGEAKVPFF--TISGSDFVEMFVGVGASRVR 94 >1JBK-A nrPDB Length = 195 Score = 29.9 bits (66), Expect = 0.81, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 16/28 (57%), Gaps = 4/28 (14%) Query: 12 IILGDSGVGKTS----LMNQYVNKKFSN 35 +++G+ GVGKT+ L + +N + Sbjct: 47 VLIGEPGVGKTAIVEGLAQRIINGEVPE 74 >4CIU-A nrPDB Length = 727 Score = 29.9 bits (66), Expect = 0.82, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 16/28 (57%), Gaps = 4/28 (14%) Query: 12 IILGDSGVGKTS----LMNQYVNKKFSN 35 +++G+ GVGKT+ L + +N + Sbjct: 61 VLIGEPGVGKTAIVEGLAQRIINGEVPE 88 >5NIK-J nrPDB Length = 654 Score = 29.9 bits (66), Expect = 0.86, Method: Composition-based stats. Identities = 10/18 (55%), Positives = 13/18 (72%) Query: 11 VIILGDSGVGKTSLMNQY 28 V I+G SG GK++LMN Sbjct: 37 VAIVGASGSGKSTLMNIL 54 >5LJA-A nrPDB Length = 231 Score = 29.9 bits (66), Expect = 0.86, Method: Composition-based stats. Identities = 10/18 (55%), Positives = 13/18 (72%) Query: 11 VIILGDSGVGKTSLMNQY 28 V I+G SG GK++LMN Sbjct: 37 VAIVGASGSGKSTLMNIL 54 >4RY2-A nrPDB Length = 730 Score = 29.9 bits (66), Expect = 0.88, Method: Composition-based stats. Identities = 10/20 (50%), Positives = 14/20 (70%) Query: 11 VIILGDSGVGKTSLMNQYVN 30 V I+G+SG GKT+L +N Sbjct: 518 VAIVGESGSGKTTLAKLLMN 537 >6H7G-A nrPDB Length = 346 Score = 29.9 bits (66), Expect = 0.88, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 4/51 (7%) Query: 10 KVIILG---DSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLV 57 K +++G DSG GK++ M + + F K G + + ++ D V Sbjct: 6 KTVVIGLAADSGCGKSTFMRR-MTSIFGGVPKPPAGGNPDSNTLISDMTTV 55 >3VAA-A nrPDB Length = 199 Score = 29.9 bits (66), Expect = 0.89, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 22/55 (40%), Gaps = 10/55 (18%) Query: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNK----------KFSNQYKATIGADFLTK 48 + ++++ + G G GKT+L + K ++ T+G F + Sbjct: 21 QSNAMVRIFLTGYMGAGKTTLGKAFARKLNVPFIDLDWYIEERFHKTVGELFTER 75 >2W6D-A nrPDB Length = 695 Score = 29.9 bits (66), Expect = 0.91, Method: Composition-based stats. Identities = 6/27 (22%), Positives = 18/27 (66%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNK 31 ++ + ++++LGD GK++ +N + + Sbjct: 66 QQGVFRLLVLGDMKRGKSTFLNALIGE 92 >5GKO-A nrPDB Length = 671 Score = 29.5 bits (65), Expect = 0.94, Method: Composition-based stats. Identities = 10/18 (55%), Positives = 13/18 (72%) Query: 11 VIILGDSGVGKTSLMNQY 28 V I+G SG GK++LMN Sbjct: 46 VAIVGQSGSGKSTLMNIL 63 >4Q7L-A nrPDB Length = 256 Score = 29.5 bits (65), Expect = 0.95, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 11/49 (22%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVT 58 KV ++G +G GKT+++N + D +++VD + Sbjct: 33 KVALVGPTGSGKTTIVNLLMR-----------FYDVDRGQILVDGIDIR 70 >6F1T-i nrPDB Length = 492 Score = 29.5 bits (65), Expect = 0.97, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 22/69 (31%), Gaps = 13/69 (18%) Query: 118 FPFVVLGNKIDL------------ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQA 165 P +V+ K D E+ + +C + TS KE N++ Sbjct: 225 IPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIY-TSVKEEKNLDLL 283 Query: 166 FQTIARNAL 174 ++ I Sbjct: 284 YKYIVHKTY 292 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 22/115 (19%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQ-------YKATIGADFLTKEVMVDDRLVTMQIWD 63 +++ G+ G GKT+LM + + + Y + D D + I D Sbjct: 57 ILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDED------RDDHTRCNVWILD 110 Query: 64 TAGQERFQSLGVAFYRGAD-----CCVLVFDVTAPNTF-KTLDSWRDEFLIQASP 112 G + + + F A+ + V D++ P T ++L W Sbjct: 111 --G-DLYHKGLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDK 162 >4YPL-A nrPDB Length = 555 Score = 29.5 bits (65), Expect = 0.98, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 12/14 (85%) Query: 11 VIILGDSGVGKTSL 24 ++++G GVGKTSL Sbjct: 113 LVLVGPPGVGKTSL 126 >6BZR-B nrPDB Length = 251 Score = 29.5 bits (65), Expect = 0.98, Method: Composition-based stats. Identities = 9/16 (56%), Positives = 12/16 (75%) Query: 10 KVIILGDSGVGKTSLM 25 KV I+G +G GK+SL Sbjct: 42 KVGIVGRTGAGKSSLA 57 >4A9A-A nrPDB Length = 376 Score = 29.5 bits (65), Expect = 0.98, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Query: 11 VIILGDSGVGKTSLMNQYVNKK-FSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66 V +G VGK++L+++ + + +Y+ T +T ++ + +Q+ D G Sbjct: 75 VGFVGFPSVGKSTLLSKLTGTESEAAEYEFT---TLVTVPGVIRYKGAKIQMLDLPG 128 >4HUQ-A nrPDB Length = 290 Score = 29.5 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 13/18 (72%) Query: 11 VIILGDSGVGKTSLMNQY 28 + I+G +G GK++L+ Q Sbjct: 36 LAIIGHTGSGKSTLIQQL 53 >5MRE-WW nrPDB Length = 401 Score = 29.5 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 11/18 (61%), Positives = 14/18 (77%) Query: 10 KVIILGDSGVGKTSLMNQ 27 K II G+ GVGKT L++Q Sbjct: 96 KFIITGEPGVGKTVLLSQ 113 >4XGC-D nrPDB Length = 459 Score = 29.5 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 5/48 (10%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVT 58 +++LG G GKT+L+N + N+ G + L V +D L T Sbjct: 52 LLLLGPRGSGKTTLINSVLADLLPNKSF---GENTLI--VHLDGNLHT 94 >2WWW-A nrPDB Length = 349 Score = 29.5 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 13/29 (44%) Query: 2 TSRKKVLLKVIILGDSGVGKTSLMNQYVN 30 K + +V + G G GK++ + + Sbjct: 68 NKGKPLAFRVGLSGPPGAGKSTFIEYFGK 96 >4HZI-A nrPDB Length = 294 Score = 29.5 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68 ++LG +G GK++L+N ++ + + E+ + D + I D++ QE Sbjct: 63 CVLLGRNGAGKSTLVNLIYGMIWATSGTIRLFQETYG-EIAIQDLRKRIGILDSSQQE 119 >3VX4-A nrPDB Length = 273 Score = 29.5 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 10 KVIILGDSGVGKTSLMNQYVN 30 KV ++G SG GKT+L VN Sbjct: 63 KVSLVGASGSGKTTLAKLIVN 83 >4YPN-A nrPDB Length = 293 Score = 29.5 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 12/14 (85%) Query: 11 VIILGDSGVGKTSL 24 ++++G GVGKTSL Sbjct: 146 LVLVGPPGVGKTSL 159 >5MKK-A nrPDB Length = 611 Score = 29.1 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 5/37 (13%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFL 46 KV ++G +G GKTS+++ +F Y G FL Sbjct: 387 KVALVGATGAGKTSVVSLIA--RF---YDPQRGCVFL 418 >2DBY-A nrPDB Length = 368 Score = 29.1 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Query: 8 LLKVIILGDSGVGKTSLMNQYVN-KKFSNQY-KATIGADFLTKEVMVDDRLVTMQ 60 +L V I+G VGK++L N + Y ATI + + D+RL +Q Sbjct: 1 MLAVGIVGLPNVGKSTLFNALTRANALAANYPFATIDKNVGVVPLE-DERLYALQ 54 >6I3O-A nrPDB Length = 677 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 19/27 (70%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQY 37 +I++G++G GKT+ + QY+ + +Y Sbjct: 31 LIVVGETGSGKTTQVTQYLAEAGFTKY 57 >3LXX-A nrPDB Length = 239 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 31/65 (47%), Gaps = 6/65 (9%) Query: 5 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDD---RLVTMQI 61 + L+++++G +G GK++ N + +K + + A +TK+ + + + Sbjct: 26 RNSQLRIVLVGKTGAGKSATGNSILGRKV---FHSGTAAKSITKKCEKRSSSWKETELVV 82 Query: 62 WDTAG 66 DT G Sbjct: 83 VDTPG 87 >2XTZ-A nrPDB Length = 354 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 7/44 (15%) Query: 10 KVIILGDSGVGKTSLMNQ---YVNKKFSN----QYKATIGADFL 46 K+++LG GK+++ Q F Y I A+ Sbjct: 11 KLLLLGAGESGKSTIFKQIKLLFQTGFDEGELKSYVPVIHANVY 54 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 35/119 (29%), Gaps = 20/119 (16%) Query: 36 QYKATIGADFLTKE-----VMVDDRLV--------TMQIWDTAGQERFQSLGVAFYRGAD 82 Y T + V + V +++D GQ + + + G Sbjct: 149 NYIPTKEDVLYARVRTTGVVEIQFSPVGENKKSGEVYRLFDVGGQRNERRKWIHLFEGVT 208 Query: 83 CCVLVFDVT--APNTFKTLDSWR----DEFLIQASPRDP-ENFPFVVLGNKIDLENRQV 134 + ++ F+ R E + E F++ NK D+ ++V Sbjct: 209 AVIFCAAISEYDQTLFEDEQKNRMMETKELFDWVLKQPCFEKTSFMLFLNKFDIFEKKV 267 >1QVR-A nrPDB Length = 854 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 14/28 (50%), Gaps = 4/28 (14%) Query: 12 IILGDSGVGKTS----LMNQYVNKKFSN 35 +++G+ GVGKT+ L + V Sbjct: 195 VLIGEPGVGKTAIVEGLAQRIVKGDVPE 222 >6BZS-A nrPDB Length = 238 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 6/21 (28%), Positives = 14/21 (66%) Query: 11 VIILGDSGVGKTSLMNQYVNK 31 + ++G G GK+SL++ + + Sbjct: 38 LAVVGPVGAGKSSLLSALLGE 58 >6CS8-A nrPDB Length = 303 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 17/136 (12%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATI---GADFLTKEVMVDDRLV 57 + K ++++G +GVGKT+ + + +F Q K+ + G F V Sbjct: 92 LNVEGKAPFVILMVGVNGVGKTTTIGKLAR-QFEQQGKSVMLAAGDTFRAAAVE------ 144 Query: 58 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEF---LIQASPRD 114 +Q+W GQ R +A + GAD ++FD + +D + L S Sbjct: 145 QLQVW---GQ-RNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLM 200 Query: 115 PENFPFVVLGNKIDLE 130 E V + K+D+E Sbjct: 201 EELKKIVRVMKKLDVE 216 >2GZA-A nrPDB Length = 361 Score = 29.1 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 19/31 (61%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATI 41 +++ G++G GKT+LM + + +Q TI Sbjct: 178 IVVAGETGSGKTTLMKALMQEIPFDQRLITI 208 >2IYT-A nrPDB Length = 184 Score = 29.1 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 29/66 (43%), Gaps = 11/66 (16%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVT--MQIWDTAGQ 67 K +++G G GK+++ + +G L +V ++ R I+ T G+ Sbjct: 4 KAVLVGLPGSGKSTIGRRLAK---------ALGVGLLDTDVAIEQRTGRSIADIFATDGE 54 Query: 68 ERFQSL 73 + F+ + Sbjct: 55 QEFRRI 60 >5L22-B nrPDB Length = 572 Score = 29.1 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 13/20 (65%) Query: 11 VIILGDSGVGKTSLMNQYVN 30 V I+G SG GK+SL+ + Sbjct: 362 VAIIGPSGSGKSSLVRTILG 381 >2B7C-A nrPDB Length = 458 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 60/204 (29%), Gaps = 41/204 (20%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNK----------KFSNQYKATIGADFL---- 46 M K + V+++G GK++ + K KF + F Sbjct: 1 MGKEKSH-INVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWV 59 Query: 47 --------TKEVMVD-------DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVT 91 + + +D + + D G F + ADC +L+ Sbjct: 60 LDKLKAERERGITIDIALWKFETPKYQVTVIDAPGHRDFIKNMITGTSQADCAILIIAGG 119 Query: 92 APNTFKTLDSWRDEFLIQASPRDPENFPFVVLG-NKID----LENR-QVATKRAQAWCYS 145 F+ S + A +++ NK+D E+R Q K + Sbjct: 120 VGE-FEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDSVKWDESRFQEIVKETSNFIKK 178 Query: 146 KN----NIPYFETSAKEAINVEQA 165 +P+ S N+ +A Sbjct: 179 VGYNPKTVPFVPISGWNGDNMIEA 202 >4C3Z-A nrPDB Length = 266 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 13/19 (68%) Query: 11 VIILGDSGVGKTSLMNQYV 29 V ++G G GK+SL++ + Sbjct: 59 VAVVGQVGCGKSSLLSALL 77 >2CBZ-A nrPDB Length = 237 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 13/19 (68%) Query: 11 VIILGDSGVGKTSLMNQYV 29 V ++G G GK+SL++ + Sbjct: 34 VAVVGQVGCGKSSLLSALL 52 >6F1Y-j nrPDB Length = 337 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 22/69 (31%), Gaps = 13/69 (18%) Query: 118 FPFVVLGNKIDL------------ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQA 165 P +V+ K D E+ + +C + TS KE N++ Sbjct: 189 IPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIY-TSVKEEKNLDLL 247 Query: 166 FQTIARNAL 174 ++ I Sbjct: 248 YKYIVHKTY 256 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 22/115 (19%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQ-------YKATIGADFLTKEVMVDDRLVTMQIWD 63 +++ G+ G GKT+LM + + + Y + D D + I D Sbjct: 21 ILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDED------RDDHTRCNVWILD 74 Query: 64 TAGQERFQSLGVAFYRGAD-----CCVLVFDVTAPNTF-KTLDSWRDEFLIQASP 112 G + + + F A+ + V D++ P T ++L W Sbjct: 75 --G-DLYHKGLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDK 126 >4IXM-A nrPDB Length = 318 Score = 28.7 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 3/46 (6%) Query: 12 IILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLV 57 ++ G G GKT+L+ +++ + A I +F EV VDD+L+ Sbjct: 8 LLTGFLGAGKTTLL-RHILNEQHGYKIAVIENEFG--EVSVDDQLI 50 >3PXG-A nrPDB Length = 468 Score = 28.7 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 4/28 (14%) Query: 12 IILGDSGVGKTS----LMNQYVNKKFSN 35 +++G+ GVGKT+ L Q +N + Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNEVPE 232 >6IC4-I nrPDB Length = 233 Score = 28.7 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 11/46 (23%) Query: 12 IILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLV 57 I+G SG GKT+L+ + + + EV++D + + Sbjct: 31 AIMGPSGTGKTTLL-RLIGGQLVPDQG----------EVLLDGKDI 65 >3J3U-A nrPDB Length = 810 Score = 28.7 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 4/28 (14%) Query: 12 IILGDSGVGKTS----LMNQYVNKKFSN 35 +++G+ GVGKT+ L Q +N + Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNEVPE 232 >4MJX-A nrPDB Length = 336 Score = 28.7 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 34/79 (43%), Gaps = 15/79 (18%) Query: 143 CYSKNNIPYFETSAKEAINVEQ---------AFQTIARNALKQETEVELYNEFPEP---- 189 C + +I + E S+K+A +E+ F ++ L + + + +P Sbjct: 228 CIQEGDILFIEDSSKDAATIERSFSFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEIL 287 Query: 190 IKLDKNERAK--ASAESCS 206 +++ +N+R A + C+ Sbjct: 288 LEVLQNQRIPLLADFDCCA 306 >6QUZ-A nrPDB Length = 587 Score = 28.7 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 9/16 (56%), Positives = 14/16 (87%) Query: 11 VIILGDSGVGKTSLMN 26 V +LG++G GK++LMN Sbjct: 372 VAVLGETGSGKSTLMN 387 >3PXI-A nrPDB Length = 758 Score = 28.7 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 4/28 (14%) Query: 12 IILGDSGVGKTS----LMNQYVNKKFSN 35 +++G+ GVGKT+ L Q +N + Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNEVPE 232 >3L43-A nrPDB Length = 319 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 6/23 (26%), Positives = 14/23 (60%) Query: 11 VIILGDSGVGKTSLMNQYVNKKF 33 + ++G GK+S++ +V + F Sbjct: 47 IAVVGGQSAGKSSVLENFVGRDF 69 >2AKA-B nrPDB Length = 299 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 6/23 (26%), Positives = 14/23 (60%) Query: 11 VIILGDSGVGKTSLMNQYVNKKF 33 + ++G GK+S++ +V + F Sbjct: 29 IAVVGGQSAGKSSVLENFVGRDF 51 >6ED3-A nrPDB Length = 848 Score = 28.7 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 4/29 (13%) Query: 12 IILGDSGVGKTS----LMNQYVNKKFSNQ 36 +++G+ GVGKT+ L + V Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVAGDVPES 231 >1LVG-A nrPDB Length = 198 Score = 28.7 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 14/22 (63%) Query: 11 VIILGDSGVGKTSLMNQYVNKK 32 V++ G SG GK++L+ + + Sbjct: 7 VVLSGPSGAGKSTLLKKLFQEH 28 >2X2E-A nrPDB Length = 353 Score = 28.7 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 6/23 (26%), Positives = 14/23 (60%) Query: 11 VIILGDSGVGKTSLMNQYVNKKF 33 + ++G GK+S++ +V + F Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDF 56 >4UUD-B nrPDB Length = 864 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 6/23 (26%), Positives = 14/23 (60%) Query: 11 VIILGDSGVGKTSLMNQYVNKKF 33 + ++G GK+S++ +V + F Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDF 56 >5GAD-l nrPDB Length = 497 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 17/136 (12%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATI---GADFLTKEVMVDDRLV 57 + K ++++G +GVGKT+ + + +F Q K+ + G F V Sbjct: 286 LNVEGKAPFVILMVGVNGVGKTTTIGKLAR-QFEQQGKSVMLAAGDTFRAAAVE------ 338 Query: 58 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEF---LIQASPRD 114 +Q+W GQ R +A + GAD ++FD + +D + L S Sbjct: 339 QLQVW---GQ-RNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLM 394 Query: 115 PENFPFVVLGNKIDLE 130 E V + K+D+E Sbjct: 395 EELKKIVRVMKKLDVE 410 >2PZF-A nrPDB Length = 228 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 6/38 (15%) Query: 5 KKVLLKV------IILGDSGVGKTSLMNQYVNKKFSNQ 36 K + K+ + G +G GKTSL+ + + ++ Sbjct: 25 KDINFKIERGQLLAVAGSTGAGKTSLLMMIMGELEPSE 62 >5D4W-A nrPDB Length = 926 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 13/14 (92%) Query: 12 IILGDSGVGKTSLM 25 +++G+ GVGKT+++ Sbjct: 220 VLIGEPGVGKTTIV 233 >5LKM-A nrPDB Length = 452 Score = 28.3 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 15/21 (71%) Query: 11 VIILGDSGVGKTSLMNQYVNK 31 V+I GD G+GK++L+ Q + Sbjct: 91 VLIGGDPGIGKSTLLLQVSTQ 111 >4HSE-A nrPDB Length = 397 Score = 28.3 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 14/28 (50%), Gaps = 4/28 (14%) Query: 12 IILGDSGVGKTS----LMNQYVNKKFSN 35 +++G+ GVGKT+ L + V Sbjct: 58 VLIGEPGVGKTAIVEGLAQRIVKGDVPE 85 >4G1U-C nrPDB Length = 266 Score = 28.3 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQY 37 V I+G +G GK++L+ + + S + Sbjct: 40 VAIIGPNGAGKSTLL-RLLTGYLSPSH 65 >4XGC-E nrPDB Length = 460 Score = 28.3 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 15/30 (50%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKAT 40 + + G SG GKT+L ++ + Q T Sbjct: 37 IYLFGHSGTGKTALTRAFLKECGKRQNVRT 66 >4WZ6-A nrPDB Length = 290 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 6/38 (15%) Query: 5 KKVLLKV------IILGDSGVGKTSLMNQYVNKKFSNQ 36 K + K+ + G +G GKTSL+ + + ++ Sbjct: 55 KDINFKIERGQLLAVAGSTGAGKTSLLMMIMGELEPSE 92 >4Q7K-A nrPDB Length = 250 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 9/16 (56%), Positives = 14/16 (87%) Query: 11 VIILGDSGVGKTSLMN 26 V +LG++G GK++LMN Sbjct: 34 VAVLGETGSGKSTLMN 49 >6DJQ-A nrPDB Length = 391 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 6/23 (26%), Positives = 14/23 (60%) Query: 11 VIILGDSGVGKTSLMNQYVNKKF 33 ++++G GK+S++ V + F Sbjct: 48 IVVVGSQSSGKSSVLENIVGRDF 70 >6AN5-A nrPDB Length = 242 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 6/26 (23%), Positives = 14/26 (53%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQ 36 + I+G +G GK++L+ ++ Sbjct: 49 LGIVGPNGAGKSTLLKVITGVTEPDK 74 >4A2I-V nrPDB Length = 277 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 9/16 (56%), Positives = 12/16 (75%) Query: 15 GDSGVGKTSLMNQYVN 30 G SGVGK+SL+N + Sbjct: 167 GQSGVGKSSLLNALLG 182 >5NO4-Z nrPDB Length = 313 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 9/16 (56%), Positives = 12/16 (75%) Query: 15 GDSGVGKTSLMNQYVN 30 G SGVGK+SL+N + Sbjct: 181 GQSGVGKSSLLNALLG 196 >5GM6-Y nrPDB Length = 876 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 1/27 (3%) Query: 11 VIILGDSGVGKTSLMNQY-VNKKFSNQ 36 +II+G++G GKT+ + QY V F++Q Sbjct: 242 LIIMGETGSGKTTQLPQYLVEDGFTDQ 268 >4F4J-A nrPDB Length = 202 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 65/189 (34%), Gaps = 40/189 (21%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLT-KEVMVDDRLVTMQIWDTAGQER 69 ++I G SG GK++L+ + ++ + + ++ + T + V+ + D Sbjct: 20 IVISGPSGTGKSTLLKKLFA-EYPDSFGFSVPSTTRTPRAGEVNGKDYNFVSVD-----E 73 Query: 70 FQSLGV------------AFYRGADC-----------CVLVFDVTAPNTFKTLDSWRDEF 106 F+S+ +Y C+L D+ + K + F Sbjct: 74 FKSMIKNNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARF 133 Query: 107 LIQASPRDPENFPFVVLGNKIDLENRQVATKRA--QAWCYSKNNIPYFETSAKEAINVEQ 164 L +P E+ K LE R T+ + + ++ + Y ET A + + V Sbjct: 134 L-FIAPPSVEDL-------KKRLEGRGTETEESINKRLSAAQAELAYAETGAHDKVIVND 185 Query: 165 AFQTIARNA 173 + Sbjct: 186 DLDKAYKEL 194 >5CA8-A nrPDB Length = 692 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 13/24 (54%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFS 34 + + G GK++L+N+ N F Sbjct: 61 ISVFGSQSTGKSTLLNRLFNTNFD 84 >5A3F-A nrPDB Length = 754 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 6/23 (26%), Positives = 14/23 (60%) Query: 11 VIILGDSGVGKTSLMNQYVNKKF 33 + ++G GK+S++ +V + F Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDF 56 >2GHI-A nrPDB Length = 260 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 28/186 (15%), Positives = 60/186 (32%), Gaps = 46/186 (24%) Query: 11 VIILGDSGVGKTS---LMNQYVN------------KKFSNQYKATIGADFLTKEVMVDDR 55 ++G +G GK++ L+ ++ + K++ +I + ++ ++ + Sbjct: 49 CALVGHTGSGKSTIAKLLYRFYDAEGDIKIGGKNVNKYNRNSIRSI-IGIVPQDTILFNE 107 Query: 56 LVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDP 115 + I + L D T K S + I+A P+ Sbjct: 108 TIKYNIL-------YGKL---------------DATDEEVIKATKSAQLYDFIEALPKKW 145 Query: 116 ENFPFVVLGN---KIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN 172 + +GN K+ RQ A+ + + E ++ E FQ + Sbjct: 146 DTI----VGNKGMKLSGGERQRIAI-ARCLLKDPKIVIFDEATSSLDSKTEYLFQKAVED 200 Query: 173 ALKQET 178 K T Sbjct: 201 LRKNRT 206 >6G2G-A nrPDB Length = 310 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 12/19 (63%) Query: 11 VIILGDSGVGKTSLMNQYV 29 +++ G GVGK+S+ Q Sbjct: 11 LVLSGKGGVGKSSVTTQLA 29 >3ZQJ-A nrPDB Length = 993 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 10/55 (18%) Query: 13 ILGDSGVGKTSLMNQYV----------NKKFSNQYKATIGADFLTKEVMVDDRLV 57 + G SG GK++L+N + ++ ++ G D+L K V VD + Sbjct: 673 VTGVSGSGKSTLVNDILAAVLANRLNGARQVPGRHTRVTGLDYLDKLVRVDQSPI 727 >2QEN-A nrPDB Length = 350 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 16/21 (76%) Query: 12 IILGDSGVGKTSLMNQYVNKK 32 ++LG VGK+SL+ ++N++ Sbjct: 35 LLLGIRRVGKSSLLRAFLNER 55 >5TV4-A nrPDB Length = 605 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 14/21 (66%), Gaps = 3/21 (14%) Query: 11 VIILGDSGVGKT---SLMNQY 28 V ++G SG GK+ SL+ ++ Sbjct: 395 VALVGRSGSGKSTIASLITRF 415 >3CNO-A nrPDB Length = 262 Score = 28.0 bits (61), Expect = 2.7, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 6/62 (9%) Query: 6 KVLLKVIILGDSGVGKTSLMNQYVNKKFSN-QYKATIGADFLTKEVMVDDRLVTMQIWDT 64 L +V+I+G GK++++N+ K+ S+ + I TK + ++I DT Sbjct: 97 DRLARVLIVGVPNTGKSTIINKLKGKRASSVGAQPGI-----TKGIQWFSLENGVKILDT 151 Query: 65 AG 66 G Sbjct: 152 PG 153 >2ZBL-A nrPDB Length = 421 Score = 28.0 bits (61), Expect = 2.7, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Query: 43 ADFLTKEVMVDDRLVTMQIWDTA-GQERFQSLGVAFYRGADCCVLVFDVT 91 + + K ++ + ++ WD A Q G A + ++V+DVT Sbjct: 139 IEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVT 188 >2D62-A nrPDB Length = 375 Score = 28.0 bits (61), Expect = 2.7, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 21/49 (42%), Gaps = 5/49 (10%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTM 59 +++LG SG GKT+ + + + T G ++ ++ D Sbjct: 35 LVLLGPSGCGKTTTLRMIAGLE-----EPTRGQIYIEDNLVADPEKGVF 78 >6DLV-b nrPDB Length = 748 Score = 28.0 bits (61), Expect = 2.7, Method: Composition-based stats. Identities = 6/23 (26%), Positives = 14/23 (60%) Query: 11 VIILGDSGVGKTSLMNQYVNKKF 33 + ++G GK+S++ +V + F Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDF 56 >2YKR-W nrPDB Length = 350 Score = 28.0 bits (61), Expect = 2.7, Method: Composition-based stats. Identities = 9/16 (56%), Positives = 12/16 (75%) Query: 15 GDSGVGKTSLMNQYVN 30 G SGVGK+SL+N + Sbjct: 214 GQSGVGKSSLLNALLG 229 >2P65-A nrPDB Length = 187 Score = 28.0 bits (61), Expect = 2.7, Method: Composition-based stats. Identities = 9/14 (64%), Positives = 13/14 (92%) Query: 12 IILGDSGVGKTSLM 25 I+LGD GVGKT+++ Sbjct: 47 ILLGDPGVGKTAIV 60 >3EC2-A nrPDB Length = 180 Score = 28.0 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 28/99 (28%), Gaps = 18/99 (18%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGAD-----FLTKEVMVDDRLVTM------ 59 + +G GVGKT L + + + D F K +M + + Sbjct: 41 LTFVGSPGVGKTHLAVATLKAIYEKKGIRGYFFDTKDLIFRLKHLMDEGKDTKFLKTVLN 100 Query: 60 ---QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNT 95 + D G ER ++ + + Sbjct: 101 SPVLVLDDLGSERLSDWQRELIS----YIITYRYNNLKS 135 >2DR3-A nrPDB Length = 247 Score = 28.0 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 40/124 (32%), Gaps = 13/124 (10%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER- 69 V++ G G GKT Q++ + I V V + WD E Sbjct: 26 VLLSGGPGTGKTIFSQQFLWNGLKMG-EPGIYVALEEHPVQVRQNMAQFG-WDVKPYEEK 83 Query: 70 -FQSLGVAFYRG------ADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122 ++ AF G + + V D+T F ++ R + R + + Sbjct: 84 GMFAMVDAFTAGIGKSKEYEKYI-VHDLTDIREF--IEVLRQAIRDINAKRVVVDSVTTL 140 Query: 123 LGNK 126 NK Sbjct: 141 YINK 144 >5Z1X-A nrPDB Length = 495 Score = 28.0 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 25/77 (32%), Gaps = 11/77 (14%) Query: 56 LVTMQIWDTAGQERFQS-LGVAFYRGADCCVLVFDVTAP----------NTFKTLDSWRD 104 L Q+ D AG + S L + G +V+D T P +T TL W Sbjct: 94 LYNFQVPDQAGTYWYHSHLSTQYCDGLRGAFVVYDPTDPHKALYDVDDESTVITLADWYH 153 Query: 105 EFLIQASPRDPENFPFV 121 Q + + Sbjct: 154 TLARQIVGVAIADTTLI 170 >2XSZ-A nrPDB Length = 367 Score = 28.0 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQ-YKATIGADFLTKEV 50 V++ G G GKT+L + S + +G++ + E+ Sbjct: 80 VLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEI 120 >6EMW-E nrPDB Length = 181 Score = 28.0 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 4/29 (13%) Query: 12 IILGDSGVGKTS----LMNQYVNKKFSNQ 36 +++G+ GVGKT+ L VN + Sbjct: 44 VLIGEPGVGKTAIAEGLAQAIVNNEVPET 72 >1V43-A nrPDB Length = 372 Score = 28.0 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 7/26 (26%), Positives = 14/26 (53%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQ 36 +++LG SG GKT+ + + + Sbjct: 40 LVLLGPSGCGKTTTLRMIAGLEEPTE 65 >6FA9-A nrPDB Length = 655 Score = 28.0 bits (61), Expect = 3.0, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 18/21 (85%) Query: 11 VIILGDSGVGKTSLMNQYVNK 31 +I++G++G GKT+ + QY+++ Sbjct: 50 LILVGETGSGKTTQIPQYLHE 70 >5XU1-A nrPDB Length = 245 Score = 28.0 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 10/16 (62%), Positives = 13/16 (81%) Query: 11 VIILGDSGVGKTSLMN 26 V I+G SG GK++LMN Sbjct: 49 VAIMGPSGSGKSTLMN 64 >3WMF-A nrPDB Length = 621 Score = 28.0 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 14/21 (66%), Gaps = 3/21 (14%) Query: 11 VIILGDSGVGKTS---LMNQY 28 V I+G SG GK++ L+ ++ Sbjct: 382 VAIVGGSGAGKSTIIQLLMRF 402 >6EM8-A nrPDB Length = 818 Score = 28.0 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 17/30 (56%) Query: 12 IILGDSGVGKTSLMNQYVNKKFSNQYKATI 41 +++G+ GVGKT++ +N+ T+ Sbjct: 205 VLIGEPGVGKTAIAEGLAQAIVNNEVPETL 234 >4DBL-C nrPDB Length = 249 Score = 28.0 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 5/20 (25%), Positives = 13/20 (65%) Query: 11 VIILGDSGVGKTSLMNQYVN 30 + ++G +G GK++L+ + Sbjct: 29 LHLVGPNGAGKSTLLARMAG 48 >5AVO-A nrPDB Length = 304 Score = 28.0 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 20/48 (41%), Gaps = 1/48 (2%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRL 56 +K+++ G VGK + K+ IG + +M+ D+ Sbjct: 1 MKLLLFGYGNVGK-AFRKLLHEKRSPELNDVIIGGIVTRRGIMLQDKE 47 >2PCL-A nrPDB Length = 224 Score = 28.0 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 8/18 (44%), Positives = 12/18 (66%) Query: 11 VIILGDSGVGKTSLMNQY 28 V I+G SG GK++L+ Sbjct: 33 VSIIGASGSGKSTLLYIL 50 >5LJ6-A nrPDB Length = 664 Score = 28.0 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 10/16 (62%), Positives = 13/16 (81%) Query: 11 VIILGDSGVGKTSLMN 26 V I+G SG GK++LMN Sbjct: 56 VAIMGQSGSGKSTLMN 71 >1HQC-A nrPDB Length = 324 Score = 28.0 bits (61), Expect = 3.4, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 19/29 (65%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNK 31 +RK+ L +++ G G+GKT+L + ++ Sbjct: 33 ARKEPLEHLLLFGPPGLGKTTLAHVIAHE 61 >1JJV-A nrPDB Length = 206 Score = 28.0 bits (61), Expect = 3.4, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 61 V + G G GKT++ N + + + AD + +EV+ D + +I Sbjct: 5 VGLTGGIGSGKTTIANLFTDLG-----VPLVDADVVAREVVAKDSPLLSKI 50 >5DO7-A nrPDB Length = 666 Score = 28.0 bits (61), Expect = 3.5, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 12/19 (63%) Query: 12 IILGDSGVGKTSLMNQYVN 30 ILG SG GKT+L++ Sbjct: 83 CILGSSGSGKTTLLDAMSG 101 >5EUM-A nrPDB Length = 258 Score = 27.6 bits (60), Expect = 3.5, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 14/21 (66%), Gaps = 3/21 (14%) Query: 11 VIILGDSGVGKTS---LMNQY 28 V ++G SG GK++ L+ ++ Sbjct: 48 VALVGRSGSGKSTIANLVTRF 68 >3OZX-A nrPDB Length = 538 Score = 27.6 bits (60), Expect = 3.5, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSN--QYKATIGADFLTKEV 50 + +LG +GVGKT+++ + N + +G D + K Sbjct: 28 LGVLGKNGVGKTTVLKILAGEIIPNFGDPNSKVGKDEVLKRF 69 >3NHB-A nrPDB Length = 306 Score = 27.6 bits (60), Expect = 3.5, Method: Composition-based stats. Identities = 6/21 (28%), Positives = 14/21 (66%), Gaps = 3/21 (14%) Query: 11 VIILGDSGVGKTS---LMNQY 28 + ++G SG GK++ L+ ++ Sbjct: 83 LALVGPSGAGKSTILRLLFRF 103 >3LLM-A nrPDB Length = 235 Score = 27.6 bits (60), Expect = 3.7, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 15/26 (57%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQ 36 VII G +G GKT+ + Q++ F Sbjct: 79 VIIRGATGCGKTTQVPQFILDDFIQN 104 >6QI8-A nrPDB Length = 456 Score = 27.6 bits (60), Expect = 3.8, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQ-YKATIGADFLTKEV 50 V++ G G GKT+L + S + +G++ + E+ Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEI 106 >2OCP-A nrPDB Length = 241 Score = 27.6 bits (60), Expect = 3.8, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 17/31 (54%), Gaps = 1/31 (3%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKAT 40 ++ I G+ VGK++ + + K + + AT Sbjct: 4 RLSIEGNIAVGKSTFVK-LLTKTYPEWHVAT 33 >6MAT-A nrPDB Length = 813 Score = 27.6 bits (60), Expect = 3.8, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 3/34 (8%) Query: 11 VIILGDSGVGKTSLMNQYVNK---KFSNQYKATI 41 V++ G SG GKT+L + F ++ Sbjct: 239 VLLHGPSGCGKTTLAHAIAGSIGVAFIPVSAPSV 272 >4ZIR-B nrPDB Length = 268 Score = 27.6 bits (60), Expect = 3.8, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 12/19 (63%) Query: 12 IILGDSGVGKTSLMNQYVN 30 +++G +G GKT+L+ Sbjct: 41 VVVGKNGSGKTTLLKILAG 59 >6D00-1 nrPDB Length = 883 Score = 27.6 bits (60), Expect = 3.9, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 4/29 (13%) Query: 12 IILGDSGVGKTS----LMNQYVNKKFSNQ 36 ++G+ GVGKT+ L N+ V + Sbjct: 203 CLVGEPGVGKTAIAEGLANRIVKGDIPSS 231 >1IHU-A nrPDB Length = 589 Score = 27.6 bits (60), Expect = 3.9, Method: Composition-based stats. Identities = 7/28 (25%), Positives = 15/28 (53%), Gaps = 4/28 (14%) Query: 11 VIILGDSGVGKTSL----MNQYVNKKFS 34 ++++G GVGKT++ + + F Sbjct: 330 IMLMGKGGVGKTTMAAAIAVRLADMGFD 357 >6FOC-D nrPDB Length = 475 Score = 27.6 bits (60), Expect = 4.1, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 9/66 (13%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKAT-IGADFLTKEVMVDDRLVTMQ----IWDT 64 K+ + G +GVGKT ++ Q + + + + T + A + +D V + + DT Sbjct: 155 KIALFGGAGVGKT-VLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELADANVLKDT 213 Query: 65 A---GQ 67 A GQ Sbjct: 214 ALVFGQ 219 >5VHD-D nrPDB Length = 870 Score = 27.6 bits (60), Expect = 4.1, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 15/24 (62%) Query: 12 IILGDSGVGKTSLMNQYVNKKFSN 35 +I G++G GKT+ + Q++ + Sbjct: 80 VISGETGCGKTTQVTQFILDNYIE 103 >5JZV-A nrPDB Length = 206 Score = 27.6 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 14/24 (58%) Query: 1 MTSRKKVLLKVIILGDSGVGKTSL 24 M +L +++ G GVGKT+L Sbjct: 30 MGRGSMLLPNILLTGTPGVGKTTL 53 >5AJ2-A nrPDB Length = 355 Score = 27.6 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 13/19 (68%) Query: 11 VIILGDSGVGKTSLMNQYV 29 +I G+SG GK++L+ + Sbjct: 165 CLIEGESGKGKSTLLQRIA 183 >4XD7-D nrPDB Length = 483 Score = 27.6 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 15/22 (68%) Query: 10 KVIILGDSGVGKTSLMNQYVNK 31 K+ + G +GVGKT L+ + ++ Sbjct: 163 KIGLFGGAGVGKTVLIQELIHN 184 >2BBW-A nrPDB Length = 246 Score = 27.6 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 14/29 (48%) Query: 3 SRKKVLLKVIILGDSGVGKTSLMNQYVNK 31 S LL+ +ILG G GK ++ + Sbjct: 22 SMASKLLRAVILGPPGSGKGTVCQRIAQN 50 >2RGK-A nrPDB Length = 421 Score = 27.6 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 3/51 (5%) Query: 43 ADFLTKEVMVDDRLVTMQIWDTAGQ--ERFQSLGVAFYRGADCCVLVFDVT 91 + + K ++ + ++ WD A E ++ G A + ++V+DVT Sbjct: 139 IEIIEKYFWSEEEQMCLESWDEAFSKTEEYRG-GNANMHAVEAFLIVYDVT 188 >1Z47-A nrPDB Length = 355 Score = 27.6 bits (60), Expect = 4.4, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 11/48 (22%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVT 58 V +LG SG GKT+++ + + T G +V + + VT Sbjct: 44 VGLLGPSGSGKTTILRLIAGLE-----RPTKG------DVWIGGKRVT 80 >6FKI-F nrPDB Length = 498 Score = 27.6 bits (60), Expect = 4.5, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 15/22 (68%) Query: 10 KVIILGDSGVGKTSLMNQYVNK 31 K+ + G +GVGKT L+ + +N Sbjct: 167 KIGLFGGAGVGKTVLIMELINN 188 >5CDF-E nrPDB Length = 474 Score = 27.6 bits (60), Expect = 4.5, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 15/22 (68%) Query: 10 KVIILGDSGVGKTSLMNQYVNK 31 K+ + G +GVGKT L+ + +N Sbjct: 146 KIGLFGGAGVGKTVLIMELINN 167 >4XRP-A nrPDB Length = 312 Score = 27.6 bits (60), Expect = 4.5, Method: Composition-based stats. Identities = 5/22 (22%), Positives = 13/22 (59%) Query: 11 VIILGDSGVGKTSLMNQYVNKK 32 +I++G G GK++ ++ + Sbjct: 14 LILVGAPGSGKSTFARYFIRTE 35 >2XND-D nrPDB Length = 467 Score = 27.6 bits (60), Expect = 4.5, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 15/22 (68%) Query: 10 KVIILGDSGVGKTSLMNQYVNK 31 K+ + G +GVGKT L+ + +N Sbjct: 143 KIGLFGGAGVGKTVLIMELINN 164 >2W6I-D nrPDB Length = 528 Score = 27.6 bits (60), Expect = 4.5, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 15/22 (68%) Query: 10 KVIILGDSGVGKTSLMNQYVNK 31 K+ + G +GVGKT L+ + +N Sbjct: 201 KIGLFGGAGVGKTVLIMELINN 222 >4AYX-A nrPDB Length = 595 Score = 27.2 bits (59), Expect = 4.7, Method: Composition-based stats. Identities = 8/47 (17%), Positives = 19/47 (40%), Gaps = 11/47 (23%) Query: 12 IILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVT 58 ++G SG GK+++++ + Y G + +D + Sbjct: 374 ALVGPSGSGKSTVLSLLLR-----LYDPASG------TISLDGHDIR 409 >4XIG-S nrPDB Length = 363 Score = 27.2 bits (59), Expect = 4.7, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 2/34 (5%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGAD 44 V+++G SG GK++ + + TI D Sbjct: 33 VVLVGPSGCGKSTTLRMVAGLE--EISGGTIRID 64 >5ANB-A nrPDB Length = 398 Score = 27.2 bits (59), Expect = 4.8, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 17/43 (39%) Query: 126 KIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQT 168 K L R+ T + K + + +TS+K + Q + Sbjct: 341 KRALTLRKSITTQTGRAALEKITLKFIDTSSKFGHGLHQTAED 383 >5IK2-D nrPDB Length = 462 Score = 27.2 bits (59), Expect = 5.0, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 15/22 (68%) Query: 10 KVIILGDSGVGKTSLMNQYVNK 31 K+ + G +GVGKT L+ + +N Sbjct: 146 KIGLFGGAGVGKTVLIQELINN 167 >1G6H-A nrPDB Length = 257 Score = 27.2 bits (59), Expect = 5.0, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 13/19 (68%) Query: 12 IILGDSGVGKTSLMNQYVN 30 +I+G +G GK++L+N Sbjct: 37 LIIGPNGSGKSTLINVITG 55 >4LN1-A nrPDB Length = 336 Score = 27.2 bits (59), Expect = 5.1, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 3/35 (8%) Query: 3 SRKKVLLKVIILGDSGVGKT---SLMNQYVNKKFS 34 S KK + +V+++G VG + ++NQ V ++F Sbjct: 22 SMKKGINRVVLVGTGAVGCSYAYCMINQAVAEEFV 56 >1OFI-A nrPDB Length = 310 Score = 27.2 bits (59), Expect = 5.1, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 13/20 (65%) Query: 11 VIILGDSGVGKTSLMNQYVN 30 ++++G +GVGKT + + Sbjct: 53 ILMIGPTGVGKTEIARRLAK 72 >1OXV-A nrPDB Length = 353 Score = 27.2 bits (59), Expect = 5.4, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 4/48 (8%) Query: 10 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLV 57 + ILG SG GKT+ M +T F + V + +L+ Sbjct: 33 RFGILGPSGAGKTTFMRIIAGLDVP----STGELYFDDRLVASNGKLI 76 >1IM2-A nrPDB Length = 444 Score = 27.2 bits (59), Expect = 5.6, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 13/20 (65%) Query: 11 VIILGDSGVGKTSLMNQYVN 30 ++++G +GVGKT + + Sbjct: 53 ILMIGPTGVGKTEIARRLAK 72 >2ONJ-A nrPDB Length = 578 Score = 27.2 bits (59), Expect = 5.7, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 11/48 (22%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVT 58 V +G SG GK++L+N Y T G ++++D + Sbjct: 370 VAFVGMSGGGKSTLINLI-----PRFYDVTSG------QILIDGHNIK 406 >1E94-E nrPDB Length = 449 Score = 27.2 bits (59), Expect = 5.7, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 13/20 (65%) Query: 11 VIILGDSGVGKTSLMNQYVN 30 ++++G +GVGKT + + Sbjct: 59 ILMIGPTGVGKTEIARRLAK 78 >5UOT-0 nrPDB Length = 619 Score = 27.2 bits (59), Expect = 5.9, Method: Composition-based stats. Identities = 5/20 (25%), Positives = 11/20 (55%) Query: 11 VIILGDSGVGKTSLMNQYVN 30 + ++GD GK+S++ Sbjct: 29 IAVIGDQSSGKSSVLEALSG 48 >2CE7-A nrPDB Length = 476 Score = 26.8 bits (58), Expect = 6.1, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVT 58 ++++G G GKT L+ + V + + + G+DF+ V V V Sbjct: 52 ILLVGPPGTGKT-LLARAVAGEANVPFFHISGSDFVELFVGVGAARVR 98 >2BDT-A nrPDB Length = 189 Score = 26.8 bits (58), Expect = 6.1, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 15/27 (55%) Query: 12 IILGDSGVGKTSLMNQYVNKKFSNQYK 38 II G +GVGK++ + + ++ Y Sbjct: 6 IITGPAGVGKSTTCKRLAAQLDNSAYI 32 >2JAQ-A nrPDB Length = 205 Score = 26.8 bits (58), Expect = 6.2, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD--DRLVTMQIW 62 +K+ I G G GK+++ + K +K + + ++ D + MQI+ Sbjct: 1 MKIAIFGTVGAGKSTISAEISKKLGYEIFKEPVEENPYFEQYYKDLKKTVFKMQIY 56 >3T34-A nrPDB Length = 360 Score = 26.8 bits (58), Expect = 6.3, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 13/23 (56%) Query: 11 VIILGDSGVGKTSLMNQYVNKKF 33 + ++G GK+S++ V K F Sbjct: 37 IAVVGGQSSGKSSVLESIVGKDF 59 >1Z6G-A nrPDB Length = 218 Score = 26.8 bits (58), Expect = 6.3, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 17/25 (68%), Gaps = 1/25 (4%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSN 35 ++I G SGVGK +L+ + + +F N Sbjct: 26 LVICGPSGVGKGTLIKKLL-NEFPN 49 >3M6A-A nrPDB Length = 543 Score = 26.8 bits (58), Expect = 6.5, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 10/21 (47%) Query: 11 VIILGDSGVGKTSLMNQYVNK 31 + + G GVGKTSL Sbjct: 111 LCLAGPPGVGKTSLAKSIAKS 131 >4P4S-A nrPDB Length = 303 Score = 26.8 bits (58), Expect = 6.7, Method: Composition-based stats. Identities = 5/20 (25%), Positives = 11/20 (55%) Query: 11 VIILGDSGVGKTSLMNQYVN 30 + ++GD GK+S++ Sbjct: 16 IAVIGDQSSGKSSVLEALSG 35 >4P4S-B nrPDB Length = 346 Score = 26.8 bits (58), Expect = 6.7, Method: Composition-based stats. Identities = 5/20 (25%), Positives = 11/20 (55%) Query: 11 VIILGDSGVGKTSLMNQYVN 30 + ++GD GK+S++ Sbjct: 31 IAVIGDQSSGKSSVLEALSG 50 >6CY1-A nrPDB Length = 329 Score = 26.8 bits (58), Expect = 6.9, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 4/52 (7%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 62 ++++G +GVGKT+ + + ++ S K +GA + VD + IW Sbjct: 126 IMVVGVNGVGKTTTIGKLAHQFKSEGLKVVLGAADTFRAAAVD----QLVIW 173 >3ZYS-B nrPDB Length = 662 Score = 26.8 bits (58), Expect = 7.1, Method: Composition-based stats. Identities = 5/20 (25%), Positives = 11/20 (55%) Query: 11 VIILGDSGVGKTSLMNQYVN 30 + ++GD GK+S++ Sbjct: 73 IAVIGDQSSGKSSVLEALSG 92 >5HCI-A nrPDB Length = 261 Score = 26.8 bits (58), Expect = 7.4, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 9/94 (9%) Query: 43 ADFLTKEVMVDDRLVTMQIWDTAGQ-ERF-----QSLGVAFYRGADCCVLVFDV-TAPNT 95 D + + V I DT GQ E F ++ + + V+ + V T N+ Sbjct: 85 IDQVIRLVEQKKDKFQNCIIDTPGQIECFVWSASGAIITESFASSFPTVIAYIVDTPRNS 144 Query: 96 FKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129 + ++ L S P +V+ NK D+ Sbjct: 145 --SPTTFMSNMLYACSILYKTKLPMIVVFNKTDV 176 >5GTM-A nrPDB Length = 601 Score = 26.8 bits (58), Expect = 7.4, Method: Composition-based stats. Identities = 5/20 (25%), Positives = 11/20 (55%) Query: 11 VIILGDSGVGKTSLMNQYVN 30 + ++GD GK+S++ Sbjct: 41 IAVIGDQSSGKSSVLEALSG 60 >1VIY-A nrPDB Length = 218 Score = 26.4 bits (57), Expect = 8.1, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 5/53 (9%) Query: 11 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63 V + G G GK+++ N + + + I AD + ++V+ I D Sbjct: 7 VALTGGIGSGKSTVANAFADLGIN-----VIDADIIARQVVEPGAPALHAIAD 54 >6N8N-W nrPDB Length = 640 Score = 26.4 bits (57), Expect = 9.1, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 14/24 (58%) Query: 9 LKVIILGDSGVGKTSLMNQYVNKK 32 + + ++G VGK+S +N V K Sbjct: 337 INIGLVGYPNVGKSSTINSLVGAK 360 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.149 0.421 Lambda K H 0.267 0.0460 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,972,426 Number of Sequences: 36641 Number of extensions: 318460 Number of successful extensions: 2958 Number of sequences better than 10.0: 551 Number of HSP's better than 10.0 without gapping: 610 Number of HSP's successfully gapped in prelim test: 143 Number of HSP's that attempted gapping in prelim test: 1551 Number of HSP's gapped (non-prelim): 848 length of query: 207 length of database: 10,336,785 effective HSP length: 93 effective length of query: 114 effective length of database: 6,929,172 effective search space: 789925608 effective search space used: 789925608 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 57 (26.4 bits)