BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P09467 (338 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2FHY-A nrPDB 692 0.0 1BK4-A nrPDB 642 0.0 2F3D-A nrPDB 640 0.0 5Q0C-A nrPDB 527 e-150 1DCU-A nrPDB 300 7e-82 5IZ1-A nrPDB 296 1e-80 1SPI-A nrPDB 293 6e-80 2QVR-A nrPDB 278 2e-75 5OEZ-A nrPDB 267 4e-72 5IZ3-A nrPDB 129 2e-30 4IR8-A nrPDB 124 5e-29 1G0H-A nrPDB 33 0.15 1XI6-A nrPDB 31 0.58 5ZHH-A nrPDB 30 1.8 1VDW-A nrPDB 29 2.5 3AL0-A nrPDB 28 4.7 >2FHY-A nrPDB Length = 374 Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/338 (99%), Positives = 338/338 (100%) Query: 1 MADQAPFDTDVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGI 60 MADQAPFDTDVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGI Sbjct: 37 MADQAPFDTDVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGI 96 Query: 61 AGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDP 120 AGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDP Sbjct: 97 AGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDP 156 Query: 121 LDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDC 180 LDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDC Sbjct: 157 LDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDC 216 Query: 181 GVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPDNSAP 240 GVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYA+DFDPAVTEYIQRKKFPPDNSAP Sbjct: 217 GVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYAKDFDPAVTEYIQRKKFPPDNSAP 276 Query: 241 YGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGK 300 YGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGK Sbjct: 277 YGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGK 336 Query: 301 EAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSAQ 338 EAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSAQ Sbjct: 337 EAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSAQ 374 >1BK4-A nrPDB Length = 337 Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust. Identities = 305/337 (90%), Positives = 328/337 (97%) Query: 2 ADQAPFDTDVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGIA 61 AD+APFDTD++T+TRFVMEEGRKA GTGE+TQLLNSLCTAVKAIS+AVRKAGIAHLYGIA Sbjct: 1 ADKAPFDTDISTMTRFVMEEGRKAGGTGEMTQLLNSLCTAVKAISTAVRKAGIAHLYGIA 60 Query: 62 GSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPL 121 GSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDK+AIIVEPEKRGKYVVCFDPL Sbjct: 61 GSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKNAIIVEPEKRGKYVVCFDPL 120 Query: 122 DGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDCG 181 DGSSNIDCLVS+GTIFGIYRKKSTDEPS KDALQPGRNLVAAGYALYGSATMLVLA G Sbjct: 121 DGSSNIDCLVSIGTIFGIYRKKSTDEPSTKDALQPGRNLVAAGYALYGSATMLVLAGGSG 180 Query: 182 VNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPDNSAPY 241 VN FMLDPAIGEFILVDK+VKIKKKG IYSLNEGYA+DFDPAVTEYIQ+KKFPPDNS+PY Sbjct: 181 VNSFMLDPAIGEFILVDKNVKIKKKGNIYSLNEGYAKDFDPAVTEYIQKKKFPPDNSSPY 240 Query: 242 GARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGKE 301 GARYVGSMVADVHRTLVYGGIFLYPANKKSP+GKLRLLYECNPMA++MEKAGGMATTGKE Sbjct: 241 GARYVGSMVADVHRTLVYGGIFLYPANKKSPDGKLRLLYECNPMAFIMEKAGGMATTGKE 300 Query: 302 AVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSAQ 338 A+LD++PTDIHQRAPVILGSPDDV EFL++Y+KH+ + Sbjct: 301 AILDIVPTDIHQRAPVILGSPDDVQEFLEIYKKHAVK 337 >2F3D-A nrPDB Length = 338 Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust. Identities = 304/338 (89%), Positives = 327/338 (96%) Query: 1 MADQAPFDTDVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGI 60 M DQA FDT+ TLTRFVMEEGRKARGTGE+TQLLNSLCTAVKAIS+AVRKAGIAHLYGI Sbjct: 1 MTDQAAFDTNDVTLTRFVMEEGRKARGTGEMTQLLNSLCTAVKAISTAVRKAGIAHLYGI 60 Query: 61 AGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDP 120 AGSTNVTGDQVKKLDVLSNDLV+N+LKSSFATCVLVSEEDK+AIIVEPEKRGKYVVCFDP Sbjct: 61 AGSTNVTGDQVKKLDVLSNDLVINVLKSSFATCVLVSEEDKNAIIVEPEKRGKYVVCFDP 120 Query: 121 LDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDC 180 LDGSSNIDCLVS+GTIFGIYRK STDEPSEKDALQPGRNLVAAGYALYGSATMLVLAM Sbjct: 121 LDGSSNIDCLVSIGTIFGIYRKNSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMVN 180 Query: 181 GVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPDNSAP 240 GVNCFMLDPAIGEFILVD+DVKIKKKG IYS+NEGYA++FDPA+TEYIQRKKFPPDNSAP Sbjct: 181 GVNCFMLDPAIGEFILVDRDVKIKKKGSIYSINEGYAKEFDPAITEYIQRKKFPPDNSAP 240 Query: 241 YGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGK 300 YGARYVGSMVADVHRTLVYGGIF+YPANKKSP GKLRLLYECNPMAYVMEKAGG+ATTGK Sbjct: 241 YGARYVGSMVADVHRTLVYGGIFMYPANKKSPKGKLRLLYECNPMAYVMEKAGGLATTGK 300 Query: 301 EAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSAQ 338 EAVLD++PTDIHQRAP+ILGSP+DV E L++Y+KH+A+ Sbjct: 301 EAVLDIVPTDIHQRAPIILGSPEDVTELLEIYQKHAAK 338 >5Q0C-A nrPDB Length = 339 Score = 527 bits (1358), Expect = e-150, Method: Compositional matrix adjust. Identities = 260/337 (77%), Positives = 301/337 (89%) Query: 1 MADQAPFDTDVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGI 60 M D++PF+TD+ TLTR+VME+GR+A+GTGELTQLLNS+ TA+KAISSAVRKAG+AHLYGI Sbjct: 1 MTDRSPFETDMLTLTRYVMEKGRQAKGTGELTQLLNSMLTAIKAISSAVRKAGLAHLYGI 60 Query: 61 AGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDP 120 AGS NVTGD+VKKLDVLSN LV+NML+SS++TCVLVSEE+K AII EKRGKYVVCFDP Sbjct: 61 AGSVNVTGDEVKKLDVLSNSLVINMLQSSYSTCVLVSEENKDAIITAKEKRGKYVVCFDP 120 Query: 121 LDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDC 180 LDGSSNIDCL S+GTIF IYRK S DEPSEKDALQ GRN+VAAGYALYGSAT++ L+ Sbjct: 121 LDGSSNIDCLASIGTIFAIYRKTSEDEPSEKDALQCGRNIVAAGYALYGSATLVALSTGQ 180 Query: 181 GVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPDNSAP 240 GV+ FMLDPA+GEF+LV+KDVKIKKKGKIYSLNEGYA+ FD A TEY+Q+KKFP D SAP Sbjct: 181 GVDLFMLDPALGEFVLVEKDVKIKKKGKIYSLNEGYAKYFDAATTEYVQKKKFPEDGSAP 240 Query: 241 YGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGK 300 YGARYVGSMVADVHRTLVYGGIFLYPAN+KSP GKLRLLYECNP+AY++E+AGG+ATTG Sbjct: 241 YGARYVGSMVADVHRTLVYGGIFLYPANQKSPKGKLRLLYECNPVAYIIEQAGGLATTGT 300 Query: 301 EAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSA 337 + VLDV P IHQR P+ILGSP+DV E+L +K+ A Sbjct: 301 QPVLDVKPEAIHQRVPLILGSPEDVQEYLTCVQKNQA 337 >1DCU-A nrPDB Length = 357 Score = 300 bits (767), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 152/333 (45%), Positives = 217/333 (65%), Gaps = 17/333 (5%) Query: 10 DVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGIAGSTNVTGD 69 ++ TLT +++++ +K ELT +L+S+ A K I+S V++A I++L G G+ N+ G+ Sbjct: 17 EIITLTSWLLQQEQKGIIDAELTIVLSSISMACKQIASLVQRANISNLTGTQGAVNIQGE 76 Query: 70 QVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSNIDC 129 KKLDV+SN++ N L+SS T ++ SEE+ + VE G Y+V FDPLDGSSN+D Sbjct: 77 DQKKLDVISNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNLDA 136 Query: 130 LVSVGTIFGIYRKKSTDEP-----SEKDAL------------QPGRNLVAAGYALYGSAT 172 VS G+IFGIY P S+ + L QPG NL+AAGY +Y S+ Sbjct: 137 AVSTGSIFGIYSPNDECLPDFGDDSDDNTLGTEEQRCIVNVCQPGSNLLAAGYCMYSSSV 196 Query: 173 MLVLAMDCGVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKK 232 + VL + GV F LDP GEF+L ++++I K GKIYS NEG + +D + +YI K Sbjct: 197 IFVLTIGKGVFVFTLDPLYGEFVLTQENLQIPKSGKIYSFNEGNYKLWDENLKKYIDDLK 256 Query: 233 FPPDNSAPYGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKA 292 P + PY ARY+GS+V D HRTL+YGGI+ YP +KKS NGKLRLLYEC PM++++E+A Sbjct: 257 EPGPSGKPYSARYIGSLVGDFHRTLLYGGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQA 316 Query: 293 GGMATTGKEAVLDVIPTDIHQRAPVILGSPDDV 325 GG + G + VLD+ PT+IHQR P+ +GS ++V Sbjct: 317 GGKGSDGHQRVLDIQPTEIHQRVPLYIGSTEEV 349 >5IZ1-A nrPDB Length = 337 Score = 296 bits (757), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 148/334 (44%), Positives = 217/334 (64%), Gaps = 14/334 (4%) Query: 11 VNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGIAGSTNVTGDQ 70 + T T +++++ + GELT +L+S+ A K I+S V++AGI++L G+ G N+ G+ Sbjct: 1 ITTFTTWLLKQEQAGVIDGELTIVLSSISLACKQIASLVQRAGISNLTGLQGVANIQGED 60 Query: 71 VKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSNIDCL 130 KKLDV+SN++ + L+SS T ++ SEE+ + VE G Y+V FDPLDGSSNID Sbjct: 61 QKKLDVISNEVFSSCLRSSGRTGIIASEEEDTPVAVEESYSGNYIVVFDPLDGSSNIDAA 120 Query: 131 VSVGTIFGIYRKK-----------STDEPSEK---DALQPGRNLVAAGYALYGSATMLVL 176 VS G+IFGIY+ + DE ++ + QPG NL++AGY +Y S+ +LVL Sbjct: 121 VSTGSIFGIYKPNEECLTDLGENPTIDEVAQNCVVNVCQPGSNLLSAGYCMYSSSVILVL 180 Query: 177 AMDCGVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPD 236 ++ GV F LDP GEF+L +++KI K GKIYS NEG +D + +Y+ K P Sbjct: 181 SVGHGVYGFTLDPLYGEFVLSHEEIKIPKSGKIYSFNEGNYALWDDKLKKYVDSLKDPGP 240 Query: 237 NSAPYGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMA 296 + PY ARY+GS+V D HRT++YGGI+ YP + KS NGKLRLLYEC PM+Y+ E+AGG Sbjct: 241 SGKPYSARYIGSLVGDFHRTMLYGGIYGYPRDSKSKNGKLRLLYECAPMSYLAEQAGGKG 300 Query: 297 TTGKEAVLDVIPTDIHQRAPVILGSPDDVLEFLK 330 + G + +LD+ P +HQR P+ +GS ++V + K Sbjct: 301 SDGHQRILDIQPEQVHQRVPLYVGSTEEVEKLEK 334 >1SPI-A nrPDB Length = 358 Score = 293 bits (751), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 149/337 (44%), Positives = 217/337 (64%), Gaps = 16/337 (4%) Query: 10 DVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGIAGSTNVTGD 69 ++ TLT +++++ ELT +L+S+ A K I+S V++AGI++L GI G+ N+ G+ Sbjct: 19 EIETLTGWLLKQPMAGVIDAELTIVLSSISLACKQIASLVQRAGISNLTGIQGAVNIQGE 78 Query: 70 QVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSNIDC 129 KKLDV+SN++ + L+SS T ++ SEE+ + VE G Y+V FDPLDGSSNID Sbjct: 79 DQKKLDVVSNEVFSSCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDA 138 Query: 130 LVSVGTIFGIYRKKST-------DEPSEKDA---------LQPGRNLVAAGYALYGSATM 173 VS G+IFGIY D+ S+ A QPG NL+AAGY +Y S+ + Sbjct: 139 AVSTGSIFGIYSPNDECIVDSDHDDESQLSAEEQRCVVNVCQPGDNLLAAGYCMYSSSVI 198 Query: 174 LVLAMDCGVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKF 233 VL + GV F LDP GEF+L + ++I K GKIYS NEG + + + +Y+ K Sbjct: 199 FVLTIGKGVYAFTLDPMYGEFVLTSEKIQIPKAGKIYSFNEGNYKMWPDKLKKYMDDLKE 258 Query: 234 PPDNSAPYGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAG 293 P ++ PY +RY+GS+V D HRTL+YGGI+ YP + KS NGKLRLLYEC PM++++E+AG Sbjct: 259 PGESQKPYSSRYIGSLVGDFHRTLLYGGIYGYPRDAKSKNGKLRLLYECAPMSFIVEQAG 318 Query: 294 GMATTGKEAVLDVIPTDIHQRAPVILGSPDDVLEFLK 330 G + G + +LD+ PT+IHQR P+ +GS ++V + K Sbjct: 319 GKGSDGHQRILDIQPTEIHQRVPLYIGSVEEVEKLEK 355 >2QVR-A nrPDB Length = 332 Score = 278 bits (711), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 146/329 (44%), Positives = 211/329 (64%), Gaps = 7/329 (2%) Query: 11 VNTLTRFVMEEGRK-ARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGIAGSTNVTGD 69 + TL F++E+ + + TGELT LL+++ K I + KAG+ + G +G+ NV G+ Sbjct: 1 MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGE 60 Query: 70 QVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSNIDC 129 +KLD+ +N+ + LK+ + SEE+ ++ E + KYVV DPLDGSSNID Sbjct: 61 VQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDV 120 Query: 130 LVSVGTIFGIYRKKS-TDEP-SEKDALQPGRNLVAAGYALYGSATMLVLAMDCGVNCFML 187 VSVGTIF IYR+ + P +E+D LQPG VAAGY +YGS+TMLV CGV+ F Sbjct: 121 NVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTY 180 Query: 188 DPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQR-KKFPPDNSAPYGARYV 246 DP++G F L + ++ +KGK YS+NEG F V +YI+ ++ + PY +RY+ Sbjct: 181 DPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYI 240 Query: 247 GSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGKEAVLDV 306 GS+VAD HR L+ GGI+LYP+ P+GKLRLLYECNPMA++ E+AGG A+ GKE +LD+ Sbjct: 241 GSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPMAFLAEQAGGKASDGKERILDI 300 Query: 307 IPTDIHQRAPVILGSP---DDVLEFLKVY 332 IP +HQR +G+ +DV F++ + Sbjct: 301 IPETLHQRRSFFVGNDHMVEDVERFIREF 329 >5OEZ-A nrPDB Length = 351 Score = 267 bits (683), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 149/305 (48%), Positives = 193/305 (63%), Gaps = 10/305 (3%) Query: 29 GELTQLLNSLCTAVKAISSAVRKAGIAHLYG-IAG-STNVTGDQVKKLDVLSNDLVMNML 86 G+ T L+ ++ T+VK I +R+AG+ + G IAG S N TGD KLDV+SN L Sbjct: 26 GDFTLLMMAIQTSVKVIEKNIRRAGMKGMLGYIAGQSANATGDHQAKLDVISNIAFKAYL 85 Query: 87 KSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSVGTIFGIYR-KKST 145 SS + CVL SEE++ II E +RG Y++ FDPLDGSSNID VSVG+I+G++R K T Sbjct: 86 LSSTSVCVLGSEEEEQMIIAESGRRGDYLIFFDPLDGSSNIDANVSVGSIWGVWRLPKDT 145 Query: 146 DEPSEKDA-----LQPGRNLVAAGYALYGSATMLVLAMDCGVNCFMLDPAIGEFILVDKD 200 S +DA + G ++V+AGYA+YGSAT LVL GV+ F LDP IGEFIL Sbjct: 146 TINSVEDANAVIRMLKGTDMVSAGYAVYGSATNLVLTSGHGVDGFTLDPNIGEFILTHPH 205 Query: 201 VKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPDNSAPYGARYVGSMVADVHRTLVYG 260 + I KK IYS+NEG ++P EYI K + + Y ARY+GSMV D+HRTL+YG Sbjct: 206 ISIPKKRSIYSVNEGNYGKWEPWFKEYIDYLKM--NKTTRYSARYIGSMVGDIHRTLLYG 263 Query: 261 GIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGKEAVLDVIPTDIHQRAPVILG 320 GIF YP + GKLRLLYE PMA ++E+AGG A +L+ T +HQR PV G Sbjct: 264 GIFCYPKDANQVEGKLRLLYEAAPMAMIVEQAGGKAVGSNGRILEQSITRLHQRTPVYFG 323 Query: 321 SPDDV 325 S +V Sbjct: 324 SRQEV 328 >5IZ3-A nrPDB Length = 316 Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 104/319 (32%), Positives = 156/319 (48%), Gaps = 47/319 (14%) Query: 24 KARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGIAGSTNVTGDQVKKLDVLSNDLVM 83 KA L +LL + A++ I+ VR A G N GD+ +D+L++ L+ Sbjct: 12 KATTDKNLARLLVCMGEALRTIAFKVRTASC----GATACVNTFGDEQLAVDMLADKLLF 67 Query: 84 NMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSVGTIFGIYRKK 143 L+ S SEE+ I+ + E G + V FDPLDGSS +D +VGTIFG++ Sbjct: 68 EALRHSHVCKYACSEEE--PILQDMEGEG-FSVAFDPLDGSSIVDTNFTVGTIFGVW--- 121 Query: 144 STDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDCGVNCFMLDPAIGEFILVD----- 198 P +K GR+ A+ +YG T V+A +N F P EF+L+D Sbjct: 122 ----PGDKLTGITGRDQAASAMGIYGPRTTYVVA----INGF---PGTHEFLLMDDGKWQ 170 Query: 199 --KDVKIKKKGKIYSLNEGYAR----DFDPAVTEYIQRKKFPPDNSAPYGARYVGSMVAD 252 K+ K+GK++S A D++ + Y+ K Y RY G MV D Sbjct: 171 HVKETTEIKEGKLFSPGNLRATFDNADYEKLINYYVSEK---------YTLRYTGGMVPD 221 Query: 253 VHRTLVYG-GIFLYPANKKSPN--GKLRLLYECNPMAYVMEKAGGMATTGKEAVLDVIPT 309 V++ +V GIF N SP KLRLL+E P+ ++E AGG ++ GK++VLD + Sbjct: 222 VNQIIVKERGIF---TNVTSPTTKAKLRLLFEVAPLGLLIENAGGYSSDGKQSVLDKVVV 278 Query: 310 DIHQRAPVILGSPDDVLEF 328 + R V GS D+++ F Sbjct: 279 NTDDRTQVAYGSRDEIIRF 297 >4IR8-A nrPDB Length = 347 Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 103/310 (33%), Positives = 166/310 (53%), Gaps = 29/310 (9%) Query: 31 LTQLLNSLCTAVKAISSAVRKAGIAHLYGIAGSTNVTGDQVKKLDVLSNDLVMNMLKSSF 90 LT L+ ++ I+SA++ + + GS N GD+ +DV++ +L+ + +SS Sbjct: 40 LTDLILAILDRCGKIASALQGTSVDKV----GSVNEFGDEQLTVDVIAENLLRSWAQSSE 95 Query: 91 ATCV--LVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSVGTIFGIYR-KKSTDE 147 + V + SEED H + E K G++++C+DPLDGSS IDC +VG+I I+R + Sbjct: 96 GSAVRAVCSEEDIH--LQECHKNGEFILCWDPLDGSSIIDCNWAVGSIVSIWRIGHHGVQ 153 Query: 148 PSEKDAL--QPGRNLVAAGYALYGSATMLVLAMDCGVNCFM-----LDPAI---GEFILV 197 D L + GR VA+ +YG T V+A++ + LD + G+FI Sbjct: 154 WQGADTLIQKTGRQQVASLIVVYGPRTTGVVAVNVDAGGIVKEGTALDLEMKDNGKFICR 213 Query: 198 DKDVKIKKKGKIYS-LNEGYARDFDPAVTEYIQRKKFPPDNSAPYGARYVGSMVADVHRT 256 K + IK + KI+S N A+D PA Y Q +F + Y RY G +V DV++ Sbjct: 214 GKPI-IKPQAKIFSPANLRAAQDL-PA---YKQLIEFWMEKR--YTLRYTGGLVPDVYQI 266 Query: 257 LV-YGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGKEAVLDVIPTDIHQRA 315 V G+F PA+K +P KLR+ +E +A V+E AGG + G++++LDV + R+ Sbjct: 267 FVKQQGVFCNPASKAAP-AKLRMCFEVLAIALVVEAAGGRTSNGQKSLLDVAIEHMDHRS 325 Query: 316 PVILGSPDDV 325 + GS D++ Sbjct: 326 ALCCGSADEI 335 >1G0H-A nrPDB Length = 252 Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 11/86 (12%) Query: 64 TNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDG 123 T+ +GD+ + D +S D+ + LKS +VSEE +I + ++ V DP+DG Sbjct: 33 TSPSGDETEIFDKISEDIALKYLKS--LNVNIVSEE--LGVI---DNSSEWTVVIDPIDG 85 Query: 124 SSN-IDCLVSVGTIFGIYRKKSTDEP 148 S N I+ + FG+++ +EP Sbjct: 86 SFNFINGIPFFAFCFGVFK---NNEP 108 >1XI6-A nrPDB Length = 262 Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 7/60 (11%) Query: 67 TGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSN 126 +GD+ K +D L+ DL+++ + V V E+ I E E Y V DPLDGS N Sbjct: 47 SGDETKLVDKLAEDLILSRITE---LGVNVVSEEVGVIDNESE----YTVIVDPLDGSYN 99 >5ZHH-A nrPDB Length = 270 Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust. Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%) Query: 68 GDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSN 126 GD V D S +V+ +++ F +++EE + +Y+ DPLDG++N Sbjct: 40 GDLVTAADKASEAVVLEIIRRHFPQHSILAEESGKL----GNQDNEYLWAIDPLDGTTN 94 >1VDW-A nrPDB Length = 254 Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%) Query: 63 STNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLD 122 S + +GD+ K +D ++ +++++ K +VSEE I ++ Y V DPLD Sbjct: 35 SISPSGDETKVVDKVAENIIISKFKD--LGVNVVSEE-----IGRIDQGSDYTVVVDPLD 87 Query: 123 GSSN 126 GS N Sbjct: 88 GSYN 91 >3AL0-A nrPDB Length = 475 Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust. Identities = 11/26 (42%), Positives = 18/26 (69%) Query: 187 LDPAIGEFILVDKDVKIKKKGKIYSL 212 LDP + FI V ++V ++KKGK + + Sbjct: 36 LDPHVKAFISVRENVSVEKKGKFWGI 61 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2FHY-A nrPDB 566 e-162 1BK4-A nrPDB 545 e-155 2F3D-A nrPDB 543 e-155 5Q0C-A nrPDB 492 e-140 1DCU-A nrPDB 466 e-132 5IZ1-A nrPDB 464 e-131 1SPI-A nrPDB 464 e-131 2QVR-A nrPDB 428 e-120 5OEZ-A nrPDB 404 e-113 4IR8-A nrPDB 330 4e-91 5IZ3-A nrPDB 309 1e-84 Sequences not found previously or not previously below threshold: 1VDW-A nrPDB 36 0.021 1XI6-A nrPDB 35 0.068 2YPR-A nrPDB 34 0.096 1G0H-A nrPDB 33 0.21 1LBZ-A nrPDB 33 0.26 5E8I-A nrPDB 32 0.41 5JVT-A nrPDB 31 0.65 3LV0-A nrPDB 31 0.98 5YBC-C nrPDB 30 1.1 4IRH-A nrPDB 30 1.1 4IRG-A nrPDB 30 1.1 5ZHH-A nrPDB 30 1.5 5B7E-A nrPDB 30 1.6 2YXV-A nrPDB 30 1.6 4XIJ-A nrPDB 29 2.3 5MRC-YY nrPDB 28 6.4 6CG7-A nrPDB 28 6.8 3DI0-A nrPDB 28 6.8 CONVERGED! >2FHY-A nrPDB Length = 374 Score = 566 bits (1459), Expect = e-162, Method: Composition-based stats. Identities = 337/338 (99%), Positives = 338/338 (100%) Query: 1 MADQAPFDTDVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGI 60 MADQAPFDTDVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGI Sbjct: 37 MADQAPFDTDVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGI 96 Query: 61 AGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDP 120 AGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDP Sbjct: 97 AGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDP 156 Query: 121 LDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDC 180 LDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDC Sbjct: 157 LDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDC 216 Query: 181 GVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPDNSAP 240 GVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYA+DFDPAVTEYIQRKKFPPDNSAP Sbjct: 217 GVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYAKDFDPAVTEYIQRKKFPPDNSAP 276 Query: 241 YGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGK 300 YGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGK Sbjct: 277 YGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGK 336 Query: 301 EAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSAQ 338 EAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSAQ Sbjct: 337 EAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSAQ 374 >1BK4-A nrPDB Length = 337 Score = 545 bits (1403), Expect = e-155, Method: Composition-based stats. Identities = 305/337 (90%), Positives = 328/337 (97%) Query: 2 ADQAPFDTDVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGIA 61 AD+APFDTD++T+TRFVMEEGRKA GTGE+TQLLNSLCTAVKAIS+AVRKAGIAHLYGIA Sbjct: 1 ADKAPFDTDISTMTRFVMEEGRKAGGTGEMTQLLNSLCTAVKAISTAVRKAGIAHLYGIA 60 Query: 62 GSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPL 121 GSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDK+AIIVEPEKRGKYVVCFDPL Sbjct: 61 GSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKNAIIVEPEKRGKYVVCFDPL 120 Query: 122 DGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDCG 181 DGSSNIDCLVS+GTIFGIYRKKSTDEPS KDALQPGRNLVAAGYALYGSATMLVLA G Sbjct: 121 DGSSNIDCLVSIGTIFGIYRKKSTDEPSTKDALQPGRNLVAAGYALYGSATMLVLAGGSG 180 Query: 182 VNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPDNSAPY 241 VN FMLDPAIGEFILVDK+VKIKKKG IYSLNEGYA+DFDPAVTEYIQ+KKFPPDNS+PY Sbjct: 181 VNSFMLDPAIGEFILVDKNVKIKKKGNIYSLNEGYAKDFDPAVTEYIQKKKFPPDNSSPY 240 Query: 242 GARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGKE 301 GARYVGSMVADVHRTLVYGGIFLYPANKKSP+GKLRLLYECNPMA++MEKAGGMATTGKE Sbjct: 241 GARYVGSMVADVHRTLVYGGIFLYPANKKSPDGKLRLLYECNPMAFIMEKAGGMATTGKE 300 Query: 302 AVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSAQ 338 A+LD++PTDIHQRAPVILGSPDDV EFL++Y+KH+ + Sbjct: 301 AILDIVPTDIHQRAPVILGSPDDVQEFLEIYKKHAVK 337 >2F3D-A nrPDB Length = 338 Score = 543 bits (1400), Expect = e-155, Method: Composition-based stats. Identities = 304/338 (89%), Positives = 327/338 (96%) Query: 1 MADQAPFDTDVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGI 60 M DQA FDT+ TLTRFVMEEGRKARGTGE+TQLLNSLCTAVKAIS+AVRKAGIAHLYGI Sbjct: 1 MTDQAAFDTNDVTLTRFVMEEGRKARGTGEMTQLLNSLCTAVKAISTAVRKAGIAHLYGI 60 Query: 61 AGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDP 120 AGSTNVTGDQVKKLDVLSNDLV+N+LKSSFATCVLVSEEDK+AIIVEPEKRGKYVVCFDP Sbjct: 61 AGSTNVTGDQVKKLDVLSNDLVINVLKSSFATCVLVSEEDKNAIIVEPEKRGKYVVCFDP 120 Query: 121 LDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDC 180 LDGSSNIDCLVS+GTIFGIYRK STDEPSEKDALQPGRNLVAAGYALYGSATMLVLAM Sbjct: 121 LDGSSNIDCLVSIGTIFGIYRKNSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMVN 180 Query: 181 GVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPDNSAP 240 GVNCFMLDPAIGEFILVD+DVKIKKKG IYS+NEGYA++FDPA+TEYIQRKKFPPDNSAP Sbjct: 181 GVNCFMLDPAIGEFILVDRDVKIKKKGSIYSINEGYAKEFDPAITEYIQRKKFPPDNSAP 240 Query: 241 YGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGK 300 YGARYVGSMVADVHRTLVYGGIF+YPANKKSP GKLRLLYECNPMAYVMEKAGG+ATTGK Sbjct: 241 YGARYVGSMVADVHRTLVYGGIFMYPANKKSPKGKLRLLYECNPMAYVMEKAGGLATTGK 300 Query: 301 EAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSAQ 338 EAVLD++PTDIHQRAP+ILGSP+DV E L++Y+KH+A+ Sbjct: 301 EAVLDIVPTDIHQRAPIILGSPEDVTELLEIYQKHAAK 338 >5Q0C-A nrPDB Length = 339 Score = 492 bits (1267), Expect = e-140, Method: Composition-based stats. Identities = 260/337 (77%), Positives = 301/337 (89%) Query: 1 MADQAPFDTDVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGI 60 M D++PF+TD+ TLTR+VME+GR+A+GTGELTQLLNS+ TA+KAISSAVRKAG+AHLYGI Sbjct: 1 MTDRSPFETDMLTLTRYVMEKGRQAKGTGELTQLLNSMLTAIKAISSAVRKAGLAHLYGI 60 Query: 61 AGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDP 120 AGS NVTGD+VKKLDVLSN LV+NML+SS++TCVLVSEE+K AII EKRGKYVVCFDP Sbjct: 61 AGSVNVTGDEVKKLDVLSNSLVINMLQSSYSTCVLVSEENKDAIITAKEKRGKYVVCFDP 120 Query: 121 LDGSSNIDCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDC 180 LDGSSNIDCL S+GTIF IYRK S DEPSEKDALQ GRN+VAAGYALYGSAT++ L+ Sbjct: 121 LDGSSNIDCLASIGTIFAIYRKTSEDEPSEKDALQCGRNIVAAGYALYGSATLVALSTGQ 180 Query: 181 GVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPDNSAP 240 GV+ FMLDPA+GEF+LV+KDVKIKKKGKIYSLNEGYA+ FD A TEY+Q+KKFP D SAP Sbjct: 181 GVDLFMLDPALGEFVLVEKDVKIKKKGKIYSLNEGYAKYFDAATTEYVQKKKFPEDGSAP 240 Query: 241 YGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGK 300 YGARYVGSMVADVHRTLVYGGIFLYPAN+KSP GKLRLLYECNP+AY++E+AGG+ATTG Sbjct: 241 YGARYVGSMVADVHRTLVYGGIFLYPANQKSPKGKLRLLYECNPVAYIIEQAGGLATTGT 300 Query: 301 EAVLDVIPTDIHQRAPVILGSPDDVLEFLKVYEKHSA 337 + VLDV P IHQR P+ILGSP+DV E+L +K+ A Sbjct: 301 QPVLDVKPEAIHQRVPLILGSPEDVQEYLTCVQKNQA 337 >1DCU-A nrPDB Length = 357 Score = 466 bits (1200), Expect = e-132, Method: Composition-based stats. Identities = 152/338 (44%), Positives = 218/338 (64%), Gaps = 17/338 (5%) Query: 10 DVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGIAGSTNVTGD 69 ++ TLT +++++ +K ELT +L+S+ A K I+S V++A I++L G G+ N+ G+ Sbjct: 17 EIITLTSWLLQQEQKGIIDAELTIVLSSISMACKQIASLVQRANISNLTGTQGAVNIQGE 76 Query: 70 QVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSNIDC 129 KKLDV+SN++ N L+SS T ++ SEE+ + VE G Y+V FDPLDGSSN+D Sbjct: 77 DQKKLDVISNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNLDA 136 Query: 130 LVSVGTIFGIYRKKSTDEP-----SEKDA------------LQPGRNLVAAGYALYGSAT 172 VS G+IFGIY P S+ + QPG NL+AAGY +Y S+ Sbjct: 137 AVSTGSIFGIYSPNDECLPDFGDDSDDNTLGTEEQRCIVNVCQPGSNLLAAGYCMYSSSV 196 Query: 173 MLVLAMDCGVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKK 232 + VL + GV F LDP GEF+L ++++I K GKIYS NEG + +D + +YI K Sbjct: 197 IFVLTIGKGVFVFTLDPLYGEFVLTQENLQIPKSGKIYSFNEGNYKLWDENLKKYIDDLK 256 Query: 233 FPPDNSAPYGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKA 292 P + PY ARY+GS+V D HRTL+YGGI+ YP +KKS NGKLRLLYEC PM++++E+A Sbjct: 257 EPGPSGKPYSARYIGSLVGDFHRTLLYGGIYGYPRDKKSKNGKLRLLYECAPMSFIVEQA 316 Query: 293 GGMATTGKEAVLDVIPTDIHQRAPVILGSPDDVLEFLK 330 GG + G + VLD+ PT+IHQR P+ +GS ++V + K Sbjct: 317 GGKGSDGHQRVLDIQPTEIHQRVPLYIGSTEEVEKVEK 354 >5IZ1-A nrPDB Length = 337 Score = 464 bits (1194), Expect = e-131, Method: Composition-based stats. Identities = 146/334 (43%), Positives = 213/334 (63%), Gaps = 14/334 (4%) Query: 11 VNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGIAGSTNVTGDQ 70 + T T +++++ + GELT +L+S+ A K I+S V++AGI++L G+ G N+ G+ Sbjct: 1 ITTFTTWLLKQEQAGVIDGELTIVLSSISLACKQIASLVQRAGISNLTGLQGVANIQGED 60 Query: 71 VKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSNIDCL 130 KKLDV+SN++ + L+SS T ++ SEE+ + VE G Y+V FDPLDGSSNID Sbjct: 61 QKKLDVISNEVFSSCLRSSGRTGIIASEEEDTPVAVEESYSGNYIVVFDPLDGSSNIDAA 120 Query: 131 VSVGTIFGIYRKKSTD--------------EPSEKDALQPGRNLVAAGYALYGSATMLVL 176 VS G+IFGIY+ + + QPG NL++AGY +Y S+ +LVL Sbjct: 121 VSTGSIFGIYKPNEECLTDLGENPTIDEVAQNCVVNVCQPGSNLLSAGYCMYSSSVILVL 180 Query: 177 AMDCGVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPD 236 ++ GV F LDP GEF+L +++KI K GKIYS NEG +D + +Y+ K P Sbjct: 181 SVGHGVYGFTLDPLYGEFVLSHEEIKIPKSGKIYSFNEGNYALWDDKLKKYVDSLKDPGP 240 Query: 237 NSAPYGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMA 296 + PY ARY+GS+V D HRT++YGGI+ YP + KS NGKLRLLYEC PM+Y+ E+AGG Sbjct: 241 SGKPYSARYIGSLVGDFHRTMLYGGIYGYPRDSKSKNGKLRLLYECAPMSYLAEQAGGKG 300 Query: 297 TTGKEAVLDVIPTDIHQRAPVILGSPDDVLEFLK 330 + G + +LD+ P +HQR P+ +GS ++V + K Sbjct: 301 SDGHQRILDIQPEQVHQRVPLYVGSTEEVEKLEK 334 >1SPI-A nrPDB Length = 358 Score = 464 bits (1193), Expect = e-131, Method: Composition-based stats. Identities = 146/337 (43%), Positives = 213/337 (63%), Gaps = 16/337 (4%) Query: 10 DVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGIAGSTNVTGD 69 ++ TLT +++++ ELT +L+S+ A K I+S V++AGI++L GI G+ N+ G+ Sbjct: 19 EIETLTGWLLKQPMAGVIDAELTIVLSSISLACKQIASLVQRAGISNLTGIQGAVNIQGE 78 Query: 70 QVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSNIDC 129 KKLDV+SN++ + L+SS T ++ SEE+ + VE G Y+V FDPLDGSSNID Sbjct: 79 DQKKLDVVSNEVFSSCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDA 138 Query: 130 LVSVGTIFGIYRKKSTDEPSEK----------------DALQPGRNLVAAGYALYGSATM 173 VS G+IFGIY + QPG NL+AAGY +Y S+ + Sbjct: 139 AVSTGSIFGIYSPNDECIVDSDHDDESQLSAEEQRCVVNVCQPGDNLLAAGYCMYSSSVI 198 Query: 174 LVLAMDCGVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKF 233 VL + GV F LDP GEF+L + ++I K GKIYS NEG + + + +Y+ K Sbjct: 199 FVLTIGKGVYAFTLDPMYGEFVLTSEKIQIPKAGKIYSFNEGNYKMWPDKLKKYMDDLKE 258 Query: 234 PPDNSAPYGARYVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAG 293 P ++ PY +RY+GS+V D HRTL+YGGI+ YP + KS NGKLRLLYEC PM++++E+AG Sbjct: 259 PGESQKPYSSRYIGSLVGDFHRTLLYGGIYGYPRDAKSKNGKLRLLYECAPMSFIVEQAG 318 Query: 294 GMATTGKEAVLDVIPTDIHQRAPVILGSPDDVLEFLK 330 G + G + +LD+ PT+IHQR P+ +GS ++V + K Sbjct: 319 GKGSDGHQRILDIQPTEIHQRVPLYIGSVEEVEKLEK 355 >2QVR-A nrPDB Length = 332 Score = 428 bits (1100), Expect = e-120, Method: Composition-based stats. Identities = 145/329 (44%), Positives = 210/329 (63%), Gaps = 7/329 (2%) Query: 11 VNTLTRFVMEEGRK-ARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGIAGSTNVTGD 69 + TL F++E+ + + TGELT LL+++ K I + KAG+ + G +G+ NV G+ Sbjct: 1 MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAGLVDILGASGAENVQGE 60 Query: 70 QVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSNIDC 129 +KLD+ +N+ + LK+ + SEE+ ++ E + KYVV DPLDGSSNID Sbjct: 61 VQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEHAKYVVLMDPLDGSSNIDV 120 Query: 130 LVSVGTIFGIYRKKS--TDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDCGVNCFML 187 VSVGTIF IYR+ + +E+D LQPG VAAGY +YGS+TMLV CGV+ F Sbjct: 121 NVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTY 180 Query: 188 DPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQR-KKFPPDNSAPYGARYV 246 DP++G F L + ++ +KGK YS+NEG F V +YI+ ++ + PY +RY+ Sbjct: 181 DPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVKKYIKFCQEEDKSTNRPYTSRYI 240 Query: 247 GSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGKEAVLDV 306 GS+VAD HR L+ GGI+LYP+ P+GKLRLLYECNPMA++ E+AGG A+ GKE +LD+ Sbjct: 241 GSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYECNPMAFLAEQAGGKASDGKERILDI 300 Query: 307 IPTDIHQRAPVILGSP---DDVLEFLKVY 332 IP +HQR +G+ +DV F++ + Sbjct: 301 IPETLHQRRSFFVGNDHMVEDVERFIREF 329 >5OEZ-A nrPDB Length = 351 Score = 404 bits (1038), Expect = e-113, Method: Composition-based stats. Identities = 149/313 (47%), Positives = 195/313 (62%), Gaps = 10/313 (3%) Query: 21 EGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYG-IAG-STNVTGDQVKKLDVLS 78 + + G+ T L+ ++ T+VK I +R+AG+ + G IAG S N TGD KLDV+S Sbjct: 18 KSQPPHSRGDFTLLMMAIQTSVKVIEKNIRRAGMKGMLGYIAGQSANATGDHQAKLDVIS 77 Query: 79 NDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSVGTIFG 138 N L SS + CVL SEE++ II E +RG Y++ FDPLDGSSNID VSVG+I+G Sbjct: 78 NIAFKAYLLSSTSVCVLGSEEEEQMIIAESGRRGDYLIFFDPLDGSSNIDANVSVGSIWG 137 Query: 139 IYR-KKSTDEPSEKDA-----LQPGRNLVAAGYALYGSATMLVLAMDCGVNCFMLDPAIG 192 ++R K T S +DA + G ++V+AGYA+YGSAT LVL GV+ F LDP IG Sbjct: 138 VWRLPKDTTINSVEDANAVIRMLKGTDMVSAGYAVYGSATNLVLTSGHGVDGFTLDPNIG 197 Query: 193 EFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPDNSAPYGARYVGSMVAD 252 EFIL + I KK IYS+NEG ++P EYI K + + Y ARY+GSMV D Sbjct: 198 EFILTHPHISIPKKRSIYSVNEGNYGKWEPWFKEYIDYLK--MNKTTRYSARYIGSMVGD 255 Query: 253 VHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGKEAVLDVIPTDIH 312 +HRTL+YGGIF YP + GKLRLLYE PMA ++E+AGG A +L+ T +H Sbjct: 256 IHRTLLYGGIFCYPKDANQVEGKLRLLYEAAPMAMIVEQAGGKAVGSNGRILEQSITRLH 315 Query: 313 QRAPVILGSPDDV 325 QR PV GS +V Sbjct: 316 QRTPVYFGSRQEV 328 >4IR8-A nrPDB Length = 347 Score = 330 bits (847), Expect = 4e-91, Method: Composition-based stats. Identities = 104/335 (31%), Positives = 173/335 (51%), Gaps = 33/335 (9%) Query: 13 TLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGIAGSTNVTGDQVK 72 +L + + E+G LT L+ ++ I+SA++ + + GS N GD+ Sbjct: 26 SLDQLLKEQG----ADQTLTDLILAILDRCGKIASALQGTSVDKV----GSVNEFGDEQL 77 Query: 73 KLDVLSNDLVMNMLKSSFATCV--LVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSNIDCL 130 +DV++ +L+ + +SS + V + SEED H + E K G++++C+DPLDGSS IDC Sbjct: 78 TVDVIAENLLRSWAQSSEGSAVRAVCSEEDIH--LQECHKNGEFILCWDPLDGSSIIDCN 135 Query: 131 VSVGTIFGIYR-KKSTDEPSEKDAL--QPGRNLVAAGYALYGSATMLVLAMDCGVNCFM- 186 +VG+I I+R + D L + GR VA+ +YG T V+A++ + Sbjct: 136 WAVGSIVSIWRIGHHGVQWQGADTLIQKTGRQQVASLIVVYGPRTTGVVAVNVDAGGIVK 195 Query: 187 ----LDPAI---GEFILVDKDVKIKKKGKIYSL-NEGYARDFDPAVTEYIQRKKFPPDNS 238 LD + G+FI K + IK + KI+S N A+D Y Q +F + Sbjct: 196 EGTALDLEMKDNGKFICRGKPI-IKPQAKIFSPANLRAAQDLPA----YKQLIEFWMEKR 250 Query: 239 APYGARYVGSMVADVHRTLVY-GGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMAT 297 Y RY G +V DV++ V G+F PA+K +P KLR+ +E +A V+E AGG + Sbjct: 251 --YTLRYTGGLVPDVYQIFVKQQGVFCNPASKAAP-AKLRMCFEVLAIALVVEAAGGRTS 307 Query: 298 TGKEAVLDVIPTDIHQRAPVILGSPDDVLEFLKVY 332 G++++LDV + R+ + GS D++ + + Sbjct: 308 NGQKSLLDVAIEHMDHRSALCCGSADEIKRMEETF 342 >5IZ3-A nrPDB Length = 316 Score = 309 bits (792), Expect = 1e-84, Method: Composition-based stats. Identities = 104/321 (32%), Positives = 157/321 (48%), Gaps = 47/321 (14%) Query: 24 KARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGIAGSTNVTGDQVKKLDVLSNDLVM 83 KA L +LL + A++ I+ VR A G N GD+ +D+L++ L+ Sbjct: 12 KATTDKNLARLLVCMGEALRTIAFKVRTASC----GATACVNTFGDEQLAVDMLADKLLF 67 Query: 84 NMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSVGTIFGIYRKK 143 L+ S SEE+ I+ + E G + V FDPLDGSS +D +VGTIFG++ Sbjct: 68 EALRHSHVCKYACSEEE--PILQDMEGEG-FSVAFDPLDGSSIVDTNFTVGTIFGVW--- 121 Query: 144 STDEPSEKDALQPGRNLVAAGYALYGSATMLVLAMDCGVNCFMLDPAIGEFILVD----- 198 P +K GR+ A+ +YG T V+A +N F P EF+L+D Sbjct: 122 ----PGDKLTGITGRDQAASAMGIYGPRTTYVVA----INGF---PGTHEFLLMDDGKWQ 170 Query: 199 --KDVKIKKKGKIYSLNEGYAR----DFDPAVTEYIQRKKFPPDNSAPYGARYVGSMVAD 252 K+ K+GK++S A D++ + Y+ K Y RY G MV D Sbjct: 171 HVKETTEIKEGKLFSPGNLRATFDNADYEKLINYYVSEK---------YTLRYTGGMVPD 221 Query: 253 VHRTLVYG-GIFLYPANKKSPN--GKLRLLYECNPMAYVMEKAGGMATTGKEAVLDVIPT 309 V++ +V GIF N SP KLRLL+E P+ ++E AGG ++ GK++VLD + Sbjct: 222 VNQIIVKERGIF---TNVTSPTTKAKLRLLFEVAPLGLLIENAGGYSSDGKQSVLDKVVV 278 Query: 310 DIHQRAPVILGSPDDVLEFLK 330 + R V GS D+++ F + Sbjct: 279 NTDDRTQVAYGSRDEIIRFEE 299 >1VDW-A nrPDB Length = 254 Score = 36.2 bits (82), Expect = 0.021, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 7/64 (10%) Query: 63 STNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLD 122 S + +GD+ K +D ++ +++++ K +VSEE I ++ Y V DPLD Sbjct: 35 SISPSGDETKVVDKVAENIIISKFKDLGVN--VVSEE-----IGRIDQGSDYTVVVDPLD 87 Query: 123 GSSN 126 GS N Sbjct: 88 GSYN 91 >1XI6-A nrPDB Length = 262 Score = 34.6 bits (78), Expect = 0.068, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 7/59 (11%) Query: 68 GDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSN 126 GD+ K +D L+ DL+++ + + +VSEE + +Y V DPLDGS N Sbjct: 48 GDETKLVDKLAEDLILS--RITELGVNVVSEEVGVI-----DNESEYTVIVDPLDGSYN 99 >2YPR-A nrPDB Length = 102 Score = 33.9 bits (76), Expect = 0.096, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 24/71 (33%) Query: 175 VLAMDCGVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFP 234 +LA C + GEF L D D ++ G+ S A+ Y + Sbjct: 17 LLADRANAGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMS 76 Query: 235 PDNSAPYGARY 245 + Y R+ Sbjct: 77 KVHGKRYAYRF 87 >1G0H-A nrPDB Length = 252 Score = 32.7 bits (73), Expect = 0.21, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 8/78 (10%) Query: 68 GDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSN- 126 GD+ + D +S D+ + LKS +VSEE + + ++ V DP+DGS N Sbjct: 37 GDETEIFDKISEDIALKYLKSLNVN--IVSEE-----LGVIDNSSEWTVVIDPIDGSFNF 89 Query: 127 IDCLVSVGTIFGIYRKKS 144 I+ + FG+++ Sbjct: 90 INGIPFFAFCFGVFKNNE 107 >1LBZ-A nrPDB Length = 252 Score = 32.7 bits (73), Expect = 0.26, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 84/269 (31%), Gaps = 58/269 (21%) Query: 68 GDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSNI 127 G K D ++ D + +L+ T +V+EE G V DPLDG+ N Sbjct: 39 GTPTKAADRVAEDAALEILRKERVT--VVTEESGVL------GEGDVFVALDPLDGTFN- 89 Query: 128 DCLVSVGTIFGIYRKKSTDEPSEKDALQPGRNLVAAGYALYGSATMLVLA--MDCGVNCF 185 G +Y + + + + Sbjct: 90 ---------------------------------ATRGIPVYSVSLCFSYSDKLKDAFFGY 116 Query: 186 MLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFPPDNSAPYG-AR 244 + + A G+ D + G + A Y + PD P+ R Sbjct: 117 VYNLATGDEYYADSSG---------AYRNGERIEVSDAEELYCNAIIYYPDRKFPFKRMR 167 Query: 245 YVGSMVADVHRTLVYGGIFLYPANKKSPNGKLRLLYECNPMAYVMEKAGGMATTGKEAVL 304 GS ++ G F + + GK+ +Y+ ++ EKAGG T L Sbjct: 168 IFGSAATEL--CFFADGSFDCFLDIR--PGKMLRIYDAAAGVFIAEKAGGKVTELDGESL 223 Query: 305 DVIPTDIHQRAPVILGSPDDVLEFLKVYE 333 D+ +R ++ + + L++ + Sbjct: 224 GNKKFDMQERLNIVAANEKLHPKLLELIK 252 >5E8I-A nrPDB Length = 128 Score = 32.0 bits (71), Expect = 0.41, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 33/103 (32%), Gaps = 13/103 (12%) Query: 175 VLAMDCGVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFP 234 +L+ +C + GEF + D D ++ G+ S A+ Y + Sbjct: 19 LLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMT 78 Query: 235 PDNSAPYGARYVGSMVADVHRTL-------VYGGIFLYPANKK 270 + Y ++ D H ++ YP++ Sbjct: 79 KVHGKRYAYKF------DFHGIAQALQPHPTESSMYKYPSDIS 115 >5JVT-A nrPDB Length = 104 Score = 31.2 bits (69), Expect = 0.65, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 6/80 (7%) Query: 175 VLAMDCGVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFP 234 +L+ +C + GEF + D D ++ G+ S A+ Y + Sbjct: 19 LLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMT 78 Query: 235 PDNSAPYGARYVGSMVADVH 254 + Y ++ D H Sbjct: 79 KVHGKRYAYKF------DFH 92 >3LV0-A nrPDB Length = 267 Score = 30.8 bits (68), Expect = 0.98, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 6/89 (6%) Query: 38 LCTAVKAISSAVRKAGIAHLYGIAGSTNVTGDQVKKLDVLSNDLVMNMLKSSFATCVLVS 97 + A+KA S VR G + + S D V + D + ++ N L + + Sbjct: 15 VQAAMKAGRSLVRDYG--EVQNLQVSLKGPADYVSQADRKAEKIIFNELSKARPKFGFLM 72 Query: 98 EEDKHAIIVEPEKRGKYVVCFDPLDGSSN 126 EE + I + + R ++V DPLDG++N Sbjct: 73 EESEEIIGEDSQHR--FIV--DPLDGTTN 97 >5YBC-C nrPDB Length = 92 Score = 30.4 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 6/80 (7%) Query: 175 VLAMDCGVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFP 234 +L+ +C + GEF + D D ++ G+ S A+ Y + Sbjct: 11 LLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMT 70 Query: 235 PDNSAPYGARYVGSMVADVH 254 + Y ++ D H Sbjct: 71 KVHGKRYAYKF------DFH 84 >4IRH-A nrPDB Length = 129 Score = 30.4 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 6/80 (7%) Query: 175 VLAMDCGVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFP 234 +L+ +C + GEF + D D ++ G+ S A+ Y + Sbjct: 44 LLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMT 103 Query: 235 PDNSAPYGARYVGSMVADVH 254 + Y ++ D H Sbjct: 104 KVHGKRYAYKF------DFH 117 >4IRG-A nrPDB Length = 109 Score = 30.4 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 6/80 (7%) Query: 175 VLAMDCGVNCFMLDPAIGEFILVDKDVKIKKKGKIYSLNEGYARDFDPAVTEYIQRKKFP 234 +L+ +C + GEF + D D ++ G+ S A+ Y + Sbjct: 24 LLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMT 83 Query: 235 PDNSAPYGARYVGSMVADVH 254 + Y ++ D H Sbjct: 84 KVHGKRYAYKF------DFH 97 >5ZHH-A nrPDB Length = 270 Score = 30.0 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 4/59 (6%) Query: 68 GDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSN 126 GD V D S +V+ +++ F +++EE + E Y+ DPLDG++N Sbjct: 40 GDLVTAADKASEAVVLEIIRRHFPQHSILAEESGKLGNQDNE----YLWAIDPLDGTTN 94 >5B7E-A nrPDB Length = 526 Score = 30.0 bits (66), Expect = 1.6, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Query: 228 IQRKKFPPDNSAPYGARYVGSMVADVHRTLVYGGIFLYPANKKSPNG--KLRLLYECNPM 285 +Q KKF D Y + + V TL+ G +YP + +P G +LRLL CN Sbjct: 185 VQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGA-IYPQHA-APRGWLRLRLLNGCNAR 242 Query: 286 AY 287 + Sbjct: 243 SL 244 >2YXV-A nrPDB Length = 446 Score = 30.0 bits (66), Expect = 1.6, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Query: 228 IQRKKFPPDNSAPYGARYVGSMVADVHRTLVYGGIFLYPANKKSPNG--KLRLLYECNPM 285 +Q KKF D Y + + V TL+ G +YP + +P G +LRLL CN Sbjct: 157 VQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGA-IYPQHA-APRGWLRLRLLNGCNAR 214 Query: 286 AY 287 + Sbjct: 215 SL 216 >4XIJ-A nrPDB Length = 275 Score = 29.3 bits (64), Expect = 2.3, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 16/30 (53%) Query: 284 PMAYVMEKAGGMATTGKEAVLDVIPTDIHQ 313 P+A +E AGG A G + +L+ + Q Sbjct: 230 PLAQAVEAAGGEAINGLQMLLNQAFAQVEQ 259 >5MRC-YY nrPDB Length = 273 Score = 28.1 bits (61), Expect = 6.4, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 1/33 (3%) Query: 222 PAVTEYIQRKKFPPDNSAPYGARYVGSMVADVH 254 P + +Y Q K P S P RY S V + H Sbjct: 117 PLLAQYRQEYKRPSPESHPVTYRYT-SYVGEEH 148 >6CG7-A nrPDB Length = 207 Score = 27.7 bits (60), Expect = 6.8, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 15/25 (60%) Query: 168 YGSATMLVLAMDCGVNCFMLDPAIG 192 YGS+ LV ++ G + F +DP G Sbjct: 138 YGSSARLVYSVLDGEHHFTVDPKTG 162 >3DI0-A nrPDB Length = 295 Score = 27.7 bits (60), Expect = 6.8, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 268 NKKSPNGKLRLLYECNPMAYVME----KAGGMATTGKEAVLDVIPTDIHQRAPVILGS 321 N ++ + L E N A ++ ++ + T KE +L + + +R PVI G+ Sbjct: 22 NIEALKTHVNFLLENNAQAIIVNGTTAESPTLTTDEKERILKTVIDLVDKRVPVIAGT 79 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.134 0.350 Lambda K H 0.267 0.0413 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,496,068 Number of Sequences: 36641 Number of extensions: 488131 Number of successful extensions: 1355 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 1288 Number of HSP's gapped (non-prelim): 51 length of query: 338 length of database: 10,336,785 effective HSP length: 98 effective length of query: 240 effective length of database: 6,745,967 effective search space: 1619032080 effective search space used: 1619032080 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 59 (27.3 bits)